Ae_5AL6391

--Gene component--
Ae_5AL6391 include 5 ESTs.
LibrariesAlignment
  • 4 EST(s) from interaction library
  • 1 EST(s) from saprophytic library
    • Display gene components fasta sequences
    Susko's test : p value = 0.3894144 with a cutoff = 0.00430613
    		 Display ESTs alignement
    Display ace file

    --Best hit on NCBI non redondant (nr) protein database--
    frame e value score hit length local identity percent positives putative function organism hit ID alignment
    1 1e-117 425 513 211/321 (65%) 241/321 (75%) AF436842_1 catalase Apis mellifera ligustica gb|AAN76688.1|AF4368 blastx details

    --Best hit(s) on PFAM database--
    InterPro ID Pfam ID domain description frame ORF e value start position end position
    IPR011614 PF00199 catalase, n-terminal 1 1 8e-109 1 254

    --Gene Ontology--
    GO Aspect GO ID GO description
    molecular functionGO:0004096 catalase activity
    biological processGO:0006118 electron transport
    biological processGO:0006979 response to oxidative stress

    --Best hit on 7 predicted proteomes--
    Organism e value score hit length frame hit ID alignment
    Phytophthora sojae 1.0000000000000001e-126 449 522 1 129552 blastx details
    Phytophthora ramorum 1.0000000000000001e-126 446 431 1 48282 blastx details
    Toxoplasma gondii 1e-96 348 502 1 44.m00005 blastx details
    Nectria haematococca 4.0000000000000004e-72 267 492 1 87797 blastx details
    Arabidopsis thaliana 1.0000000000000001e-60 229 492 1 AT1G20630.1 blastx details
    Plasmodium falciparum 0.015 35.8 452 1 PF11_0302 blastx details
    Thalassiosira pseudonana 0.025 35.4 907 1 7092 blastx details 
    >Ae_5AL6391
AGCTTCATTCACACGCAAAAGCGCAACCCCGCGACGCACTTGAAGGATGCCGACATGTTC
TGGGACTTCATCTCTCTCCGTCCTGAAACCACGCATCAAGTGTCGTTCCTCTTCTCGGAC
CGCGGCATTCCTGATGGTTACCGTCACTTGAACGGCTACGGCAGCCACACGTTCGAGAAC
GTGAATGCTCAAGGCGTGGTGTCGTACGTCAAGTACCATTTCAAGACCGACCAAGGCATT
CGCAACTTGCCCGTGGATGTTGCTGACAAATTGGCCGGCACCAACCCAGACTACGCGATC
CAGGACTTGTACGAAGCCATCGCTCGCAAGGAATACCCAACATGGACGCTGTACATCCAA
GTAATGACGCAAGCTCAAGCCGAACAACACTTGGCTCAAGGCTTCAACCCGTTTGATGTG
ACCAAGGTGTGGTCGCACAAGACGTACCCGTTGAAGGAAGTCGGCAAGCTCGTCCTCAAC
CGCAATCCCGCGAACTACTTCAGCGACGTGGAGCAATTGGCGTTCTCCCCTGCGCACTTT
GTTCCTGGCATCCAACCTTCGCCTGACAAGATGCTTCAAGGCCGTCTCTTCTCCTACTCG
GACACGCATCGCCACCGTCTCGGCCCGAACTACCAACAGATCCCAGTGAATCAACCAGTG
CAGAGCCAACCCAAGAACTATCAACGTGATGGTTTCATGACCGTGAATGGCAACCAAGGC
GGCGCGCCAAATTACTTCCCCAACAGCTTCAACGGACCTGACTACTTGGCCAACGTCCCT
GAGCCTGCTAAGCAAGTGAGCCAGACGGTCATCCGTCGCTACAGCTCGAAGGACGAAGAC
AACTTCACCCAAGCTGGCGAATTCTTCCGCAATGTGCTCACGGAAGACGAACGCACTCGT
TTGGTGAACAACATCGCGTCCAACTTGATCAACGCCCAGCCATCCATTCAAGCCCGCGCA
GCG