Ae_3AL5437

--Gene component--
Ae_3AL5437 include 3 ESTs.
LibrariesAlignment
  • 1 EST(s) from interaction library
  • 2 EST(s) from saprophytic library
    • Display gene components fasta sequences
    Susko's test : p value = 0.9828985 with a cutoff = 0.01150182
    		 Display ESTs alignement
    Display ace file

    --Repeat--
    TypeFamilyStart positionEnd position
    (A)nSimple_repeat10941121

    --Best hit on NCBI non redondant (nr) protein database--
    frame e value score hit length local identity percent positives putative function organism hit ID alignment
    3 7e-73 277 293 139/263 (52%) 178/263 (67%) Peroxidase family protein Tetrahymena thermophila SB210 ref|XP_001019629.1| blastx details

    --Best hit(s) on PFAM database--
    InterPro ID Pfam ID domain description frame ORF e value start position end position
    IPR002016 PF00141 haem peroxidase, plant/fungal/bacterial 3 1 4.5999999999999995e-55 73 305

    --Gene Ontology--
    GO Aspect GO ID GO description
    molecular functionGO:0004601 peroxidase activity
    biological processGO:0006979 response to oxidative stress

    --Best hit on 7 predicted proteomes--
    Organism e value score hit length frame hit ID alignment
    Phytophthora sojae 1e-114 409 338 3 108469 blastx details
    Phytophthora ramorum 1e-102 367 254 3 38640 blastx details
    Thalassiosira pseudonana 1e-77 285 251 3 37054 blastx details
    Nectria haematococca 1e-69 259 345 3 89932 blastx details
    Arabidopsis thaliana 2e-53 206 287 3 AT4G35000.1 blastx details
    Plasmodium falciparum 0.45 31.2 2753 3 PFF0380w blastx details
    Toxoplasma gondii 1.8 29.6 1618 -2 39.m00362 blastx details 
    >Ae_3AL5437
ACACAATGTTCCGTCAAGTTGCCTCCCGTGTGACCAGATTGAGCGCGACCGCTCGCGTGA
TGGCTCCCCGTGCCGCAGCCCGCAGCCTCGCCACGTCTGCTGCATCAAGATCGACCAAGC
AAGTTAACGCTGCCGCCATCTCAGCTGCTTTCCTTGTCACAGCGGGTGCTTCCATGACTA
TGTTGCAAGCCAAGGATCAACCCGTGGACCTCCCCAAGATTCGCTCGGAAATTGTCAGCT
TGATTGAAAAGGACAACTACTTGGGACCTACTTTGGTCCGCTTGGCGTGGCATTCGTCTG
GCACGTACAGCAAGAAGGACAACAGCGGTGGCTCCAAGGGCGGAACTATCCGCTTTGACC
CTGAAATCAACCATGGTGCGAATGCTGGTTTGAACACGGCTGTTGACAAGCTCGAAGCGA
TCAAGGAACGCTACCCCAACATTTCCTACGCTGATTTGTATGTGTTCGCTGGTGTTGTCG
CCATTGCCGAAATGGGAGGTCCTGAAGTCAAGTTCCATTTGGGCCGTAAGGATGCCGAGT
CTGGCGCTGAATGCACTCCTGATGGTCGCTTGCCCGATGCTGATAAGGGAAGCAAGCCAA
ACACTATCAACCATGTCCGTGAAATTTTTTACCGCATGGGATTCAACGACCGTGAAATCG
TTGCTCTCATCGGTGCCCATGCCGTTGGTCGTTGCTACCCTACGCGTAGTGGCTACAGCG
GTCCTTGGACCCGCGCAGAGTGGACATTCTCCAATGAGTACTACCGCGAACTCATTGAAA
ACAAGTGGACTTTGAAGAAGTGGAAGGGTCCTGAACAATACACAGACCCCACTGGTGAGC
TCATGATGTTGCCTGCTGACATGGCTTTCATCTGGGACCCCGAATTCAAGAAGTACGTCG
AGTTGTATGCCAAGGATGAAGAATTGTGGCACAAGGACTTCGCCAAGGCTTTCCAAAAGC
TCACTGAAAATGGTTGCAACTTGGAAAAGAACGGCTGGCGCCGCTACATTTTCTTCGGAC
CTCGTGGCGATTAGATGTCATGAAATGTGTGTCATAATTCCCCACAATAAATGGATCGCT
GTGTACTTTATCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA