Ae_3AL5336

--Gene component--
Ae_3AL5336 include 3 ESTs.
LibrariesAlignment
  • 3 EST(s) from interaction library
  • 0 EST(s) from saprophytic library
    • Display gene components fasta sequences
    Susko's test : p value = 0.258649 with a cutoff = 0.003271907
    		 Display ESTs alignement
    Display ace file

    --Best hit on NCBI non redondant (nr) protein database--
    frame e value score hit length local identity percent positives putative function organism hit ID alignment
    1 1e-123 443 513 217/324 (66%) 246/324 (75%) AF436842_1 catalase Apis mellifera ligustica gb|AAN76688.1|AF4368 blastx details

    --Best hit(s) on PFAM database--
    InterPro ID Pfam ID domain description frame ORF e value start position end position
    IPR011614 PF00199 catalase, n-terminal 1 1 2.1000000000000003e-145 1 280

    --Gene Ontology--
    GO Aspect GO ID GO description
    molecular functionGO:0004096 catalase activity
    biological processGO:0006118 electron transport
    biological processGO:0006979 response to oxidative stress

    --Best hit on 7 predicted proteomes--
    Organism e value score hit length frame hit ID alignment
    Phytophthora sojae 1e-132 468 522 1 129552 blastx details
    Phytophthora ramorum 1e-132 467 431 1 48282 blastx details
    Toxoplasma gondii 1e-104 373 502 1 44.m00005 blastx details
    Nectria haematococca 2.0000000000000002e-82 301 492 1 87797 blastx details
    Arabidopsis thaliana 1e-71 266 474 1 AT4G35090.2 blastx details
    Plasmodium falciparum 0.012 36.2 452 1 PF11_0302 blastx details
    Thalassiosira pseudonana 0.63 30.8 662 1 24142 blastx details 
    >Ae_3AL5336
TACACGGAAGAAGGCAACTGGGACTTGGTGGGTAACAACACGCCCATCTTCTTCCTCCGA
GACCCCATTCTCTTCCCGAGCTTCATTCACACGCAAAAGCGCAACCCCGCGACGCACTTG
AAGGATGCCGACATGTTCTGGGACTTCATCTCTCTCCGTCCTGAAACCACGCATCAAGTG
TCGTTCCTCTTCTCGGACCGCGGCATTCCTGATGGTTACCGTCACTTGAACGGCTACGGC
AGCCACACGTTCGAGAACGTGAATGCTCAAGGCGTGGTGTCGTACGTCAAGTACCATTTC
AAGACCGACCAAGGCATTCGCAACTTGCCCGTGGATGTTGCTGACAAATTGGCCGGCACC
AACCCAGACTACGCGATCCAGGACTTGTACGAAGCCATCGCTCGCAAGGAATACCCAACA
TGGACGCTGTACATCCAAGTAATGACGCAAGCTCAAGCCGAACAACACTTGGCTCAAGGC
TTCAACCCGTTTGATGTGACCAAGGTGTGGTCGCACAAGACGTACCCGTTGAAGGAAGTC
GGCAAGCTCGTCCTCAACCGCAATCCCGCGAACTACTTCAGCGACGTGGAGCAATTGGCG
TTCTCCCCTGCGCACTTTGTTCCTGGCATCCAACCTTCGCCTGACAAGATGCTTCAAGGC
CGTCTCTTCTCCTACTCGGACACGCATCGCCACCGTCTCGGCCCGAACTACCAACAGATC
CCAGTGAATCAACCAGTGCAGAGCCAACCCAAGAACTATCAACGTGATGGTTTCATGACC
GTGAATGGCAACCAAGGCGGCGCGCCAAATTACTTCCCCAACAGCTTCAACGGACCTGAC
TACTTGGCCCACGTCCCTGACCCTGCTAAGCAAGTGAGCCAAACGGTCATCCCGTCGCTC
AGCTCGAAGGACGAAAACAACTTCACCCAAGCTGGGCAAATTCTCCCCAATGTGCTCACG
GGAGAAGAAACGCACTCGTTTGGTG