BLASTX 2.2.9 [May-01-2004]
BLASTX 2.2.9 [May-01-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NX0AMYA7YO07CM1.SCF (idq=205910)
         (804 letters)

Database: /home/amadoui/banque/toxo_gondii 
           7793 sequences; 5,605,631 total letters

Searching................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Toxoplasma_gondii|VIII|59.m07745|Tg Annotation|Toxoplasma_gondii...    33   0.10 
Toxoplasma_gondii|VIII|59.m00067|Tg Annotation|Toxoplasma_gondii...    32   0.23 
Toxoplasma_gondii|VIII|59.m03358|Tg Annotation|Toxoplasma_gondii...    28   2.5  
Toxoplasma_gondii|V|39.m00357|Tg Annotation|Toxoplasma_gondii_TI...    28   2.5  
Toxoplasma_gondii|VIIa|540.m00202|Tg Annotation|Toxoplasma_gondi...    28   3.3  
Toxoplasma_gondii|XI|583.m05496|Tg Annotation|Toxoplasma_gondii_...    27   5.6  
Toxoplasma_gondii|VIII|59.m03718|Tg Annotation|Toxoplasma_gondii...    27   5.6  
Toxoplasma_gondii|VI|49.m05695|Tg Annotation|Toxoplasma_gondii_T...    27   5.6  
Toxoplasma_gondii|VIIa|20.m03956|Tg Annotation|Toxoplasma_gondii...    27   5.6  
Toxoplasma_gondii|VIIa|20.m05971|Tg Annotation|Toxoplasma_gondii...    27   5.6  
Toxoplasma_gondii|XI|583.m05584|Tg Annotation|Toxoplasma_gondii_...    27   5.6  
Toxoplasma_gondii|X|42.m00109|Tg Annotation|Toxoplasma_gondii_TI...    27   5.6  
Toxoplasma_gondii|X|46.m01708|Tg Annotation|Toxoplasma_gondii_TI...    27   5.6  
Toxoplasma_gondii|X|42.m03622|Tg Annotation|Toxoplasma_gondii_TI...    27   5.6  
Toxoplasma_gondii|IX|80.m02353|Tg Annotation|Toxoplasma_gondii_T...    27   7.3  
Toxoplasma_gondii|IX|57.m01702|Tg Annotation|Toxoplasma_gondii_T...    27   7.3  
Toxoplasma_gondii|VIII|59.m03371|Tg Annotation|Toxoplasma_gondii...    27   9.5  
Toxoplasma_gondii|VIIa|20.m05963|Tg Annotation|Toxoplasma_gondii...    27   9.5  
Toxoplasma_gondii|VI|49.m03113|Tg Annotation|Toxoplasma_gondii_T...    27   9.5  
Toxoplasma_gondii|XI|35.m00890|Tg Annotation|Toxoplasma_gondii_T...    27   9.5  
Toxoplasma_gondii|XI|35.m00868|Tg Annotation|Toxoplasma_gondii_T...    27   9.5  

>Toxoplasma_gondii|VIII|59.m07745|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           conserved hypothetical protein
          Length = 299

 Score = 33.1 bits (74), Expect = 0.10
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -3

Query: 316 TKPWLPP*LISGSKRMVPP*DPPLPSAFLYVPDECHAKRT 197
           T+P LPP    G+  +VPP  PPLP    + P + + KRT
Sbjct: 246 TEPLLPP---GGTLPLVPPGGPPLPLLLRWRPKKSYKKRT 282


>Toxoplasma_gondii|VIII|59.m00067|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 2972

 Score = 32.0 bits (71), Expect = 0.23
 Identities = 20/77 (25%), Positives = 31/77 (40%)
 Frame = +1

Query: 61   FPPRSFLPRRHPRPSSTRKRMQSTWPKFAPISLT*LTKTARLPQRSFVWRGTRLVHTRKQ 240
            FPPR F P   P  S + +    +W +  P+         RLP+R+       L+  R  
Sbjct: 2267 FPPRCFSPVYSPAESDSVEESPESWARCGPVP----EPAHRLPRRTTRLHSVELMERRSS 2322

Query: 241  MAAVDLKVGPSASTLKS 291
              +   +  PS  +L S
Sbjct: 2323 EGSPHSRTRPSPYSLHS 2339


>Toxoplasma_gondii|VIII|59.m03358|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 329

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +3

Query: 444 GRKDAKSGKESTPDDRLPD-ADKGSKPKTIGHI-RDVFYRMGFNDREIVALV 593
           G+K+  +GK+ TP D  P+ +DK +  + I  + + +  ++ + D+E+   V
Sbjct: 199 GKKETPAGKKETPADEKPESSDKQTTAQLIDSLSKQMIIKLNYVDKELTGKV 250


>Toxoplasma_gondii|V|39.m00357|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           FAD-depdendent monooxygenase, putative
          Length = 925

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
 Frame = -1

Query: 804 GIPQEGPCGQGASSNPPGGLCIAQARPXXXXXXXXXXXRGNIRWKMLSRRESTDHCSRCA 625
           G  +E     G      GGL  A A              GN+RW++++ R+S++  S C 
Sbjct: 669 GSDEETGARSGCDREKEGGLGRAGA------LLAHTEASGNLRWRLIALRDSSEGLSSCQ 722

Query: 624 LGS-NDRQHEHQR 589
             S N     H R
Sbjct: 723 PSSGNAAMRGHSR 735


>Toxoplasma_gondii|VIIa|540.m00202|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding) SWIM
            zinc finger domain-containing protein
          Length = 6036

 Score = 28.1 bits (61), Expect = 3.3
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = -2

Query: 362  VGVLCLDSFEFFNHNDQTMVATVIDFRVEADGPTLRSTAAICFLVCTRRVPRQTNERWGK 183
            +G  C+D+ E  +    +    V+ F   A    L  +AA+C    T+  PR+  ER   
Sbjct: 2683 IGAFCVDAGEDADRCGSSRDGEVLPFTWAAPTLALLPSAALC----TQWEPRRRGERPQA 2738

Query: 182  RAVFVNQVNDIGANFGQVDCIR 117
            R   V   ++ G   G++D  R
Sbjct: 2739 RTFDVAPSSEEGTQAGRLDQAR 2760


>Toxoplasma_gondii|XI|583.m05496|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           collagen alpha 2(XI)-related
          Length = 888

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -3

Query: 352 FALTASSFSITMTKPWLPP*LISGSKRMVPP*DPPLPSA 236
           F + +SS  I+M KP++P    SGS+   PP  P  P A
Sbjct: 21  FQVGSSSPGISMQKPFVPRSSFSGSEIAAPPLLPEGPFA 59


>Toxoplasma_gondii|VIII|59.m03718|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 3052

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +1

Query: 475  PPQMTVCQMPTRAPS--PRPSATFA 543
            PPQM +  MP R P   PRPSA+FA
Sbjct: 1941 PPQMEL--MPPRCPDAEPRPSASFA 1963


>Toxoplasma_gondii|VI|49.m05695|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 2886

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -3

Query: 493  KRSSGVDSLPLLASLRPKWNGTSGPPISE 407
            +R   + S P+L  LRP+ +G   PP+++
Sbjct: 2497 ERQDDLSSQPILEELRPRSDGDGEPPVAQ 2525


>Toxoplasma_gondii|VIIa|20.m03956|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           metacaspase-related
          Length = 742

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 472 SPPQMTVCQMPTRAPSPRPSATFATCFTAWDSTTAK 579
           +P Q T  ++P +AP P       T    WD+T  K
Sbjct: 279 APQQPTCVEVPPQAPRPSIQQATVTASGHWDATAIK 314


>Toxoplasma_gondii|VIIa|20.m05971|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 334

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 804 GIPQEGPCGQGASSNPPGGLCIAQA 730
           G+P + PCG G  S+P     +A A
Sbjct: 294 GLPSQTPCGTGGVSDPTAAAALAAA 318


>Toxoplasma_gondii|XI|583.m05584|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding) zinc
           finger (C3HC4 type RING finger) protein, putative
          Length = 2201

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +1

Query: 37  RRNRLLWRFPPRSFLPRRHPRPSSTRKRMQSTWPKFAPISLT*LTKTARLPQ 192
           ++ +LL R PP    PR+ PRP ++      + P+ +P S   L+   R+ Q
Sbjct: 411 KKTKLLCRCPP----PRKRPRPVTSSLLSPGSEPQASPPSSLSLSSRLRVDQ 458


>Toxoplasma_gondii|X|42.m00109|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 561

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -3

Query: 199 TNVGASELSLSIKSTISARTLAKSTAFAFAWRTVEDAAVAKRNAAEIATADDFFVRL 29
           T+V +S  S S     S+   + S+A   A R V+D  V +R +   A A D F+R+
Sbjct: 324 TSVLSSHCSASCSGPSSSSRSSSSSALRCA-REVQDDTVGRRRSTSAAEAADRFLRV 379


>Toxoplasma_gondii|X|46.m01708|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 1424

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -3

Query: 517 LEPLSASGKRSSGVDSLPLLASLRPKWNGTSGPPISEMATTP 392
           L P S S   S G  SL  ++ LRP W  T+ PP +  A  P
Sbjct: 174 LSPESLSSWSSRG--SLDRVSLLRPAWLPTAAPPTASGAPEP 213


>Toxoplasma_gondii|X|42.m03622|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           elongation factor Tu GTP binding domain-containing
           protein
          Length = 3331

 Score = 27.3 bits (59), Expect = 5.6
 Identities = 24/83 (28%), Positives = 30/83 (36%)
 Frame = +2

Query: 551 LPHGIQRPRNCSARWCSCCRSLLPNAQRLQWSVDSRRDNIFQRIFPRVDRKKVDDQEVGR 730
           L    + P + S    S C S  P +     S  SRR++             V D E  R
Sbjct: 69  LDRRFKSPLSSSPHHPSLCSSASPQSSASPQSSSSRRED------------DVGDLEASR 116

Query: 731 A*AIQRPPGGFDEAPWPHGPSCG 799
           A        GF+E  WP  PS G
Sbjct: 117 A-------FGFEEKYWPREPSFG 132


>Toxoplasma_gondii|IX|80.m02353|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding) MORN
           repeat-containing protein
          Length = 465

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +3

Query: 327 EKLEAVKAKHPNITYADLYVYAGVVAISEMGGPEVPFHLGRKDAKSGKESTPD 485
           EK EA    HP ++ A      G    +E GG E     G  +AK+G  +  D
Sbjct: 58  EKTEA----HPELSAAPEEQQGGATGSAEAGGAEASGEAGTAEAKTGDAAEGD 106


>Toxoplasma_gondii|IX|57.m01702|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 2524

 Score = 26.9 bits (58), Expect = 7.3
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 91  HPRPSSTRKRMQSTWPKFAPISLT*LTKTARLPQR 195
           HPRPSS+     S+    AP+S +  + ++  PQR
Sbjct: 183 HPRPSSSSSSASSSSSSSAPLSSSSSSSSSSPPQR 217


>Toxoplasma_gondii|VIII|59.m03371|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 2273

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -3

Query: 508  LSASGKRSSGVDSLPLLASLRPKWNGTSGPP 416
            +SAS   ++ ++S P LAS  P+WN     P
Sbjct: 1099 VSASRAPAASLESRPPLASAGPRWNNPGTAP 1129


>Toxoplasma_gondii|VIIa|20.m05963|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 295

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = +1

Query: 388 MPASLPFQKWAVLKFHSTWAAKMLRAARSPPQMTVC 495
           +PAS     WAV +FH     K   AAR  PQ  +C
Sbjct: 193 VPASARASSWAVHEFHK--PLKEQPAARPDPQKLLC 226


>Toxoplasma_gondii|VI|49.m03113|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 3102

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
 Frame = -3

Query: 517  LEPLSASGKRS--SGVDSLPLLASLRPKWNGTSGPPISEMATTPA*TYKSA*VMLGCFAL 344
            + P S++G+R     + S+ +L  LR +  G+S P  S ++++                 
Sbjct: 2278 MAPSSSAGQREVEERLPSICVLPCLR-ETGGSSSPGSSSVSSSSG--------------- 2321

Query: 343  TASSFSITMTKPWLPP*LISGSKRMVPP*DPPLPSAFLYVPDECHAKRTNVG 188
            T+S   ++ +   L P L+S S  + PP     P+A+     EC  + T +G
Sbjct: 2322 TSSQSPLSFSPSALSPSLLSASSYLQPPRPSASPTAY---RSECGVQGTQLG 2370


>Toxoplasma_gondii|XI|35.m00890|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 1153

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
 Frame = -1

Query: 798 PQEGPCGQG-ASSNPPGGLCIAQAR 727
           PQ+GPCG+G A+ N    + +A AR
Sbjct: 507 PQQGPCGEGTATKNGTRDVSLAAAR 531


>Toxoplasma_gondii|XI|35.m00868|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 1958

 Score = 26.6 bits (57), Expect = 9.5
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +3

Query: 390 AGVVAISEMGGPEVPFHLGRKDAKSGKESTPDDRLPDADKGSKP 521
           AGVV+++    P+    +G  +  S +E +PD  LP       P
Sbjct: 41  AGVVSVAVDSTPQFTSGVGCSEGPSNREQSPDFSLPSIGGAVSP 84


  Database: /home/amadoui/banque/toxo_gondii
    Posted date:  Mar 30, 2007  3:41 PM
  Number of letters in database: 5,605,631
  Number of sequences in database:  7793
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,860,624
Number of Sequences: 7793
Number of extensions: 243629
Number of successful extensions: 1112
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 5,605,631
effective HSP length: 93
effective length of database: 4,880,882
effective search space used: 849273468
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)