BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NX0AMYA7YC17CM1.SCF (idq=218988) (968 letters) Database: /home/amadoui/banque/toxo_gondii 7793 sequences; 5,605,631 total letters Searching................done Score E Sequences producing significant alignments: (bits) Value Toxoplasma_gondii|IX|57.m00002|Tg Annotation|Toxoplasma_gondii_T... 115 2e-26 Toxoplasma_gondii|IX|57.m03094|Tg Annotation|Toxoplasma_gondii_T... 65 2e-11 Toxoplasma_gondii|VIII|44.m02621|Tg Annotation|Toxoplasma_gondii... 35 0.045 Toxoplasma_gondii|XII|65.m01143|Tg Annotation|Toxoplasma_gondii_... 32 0.38 Toxoplasma_gondii|VIII|44.m02720|Tg Annotation|Toxoplasma_gondii... 31 0.50 Toxoplasma_gondii|VIII|44.m02543|Tg Annotation|Toxoplasma_gondii... 31 0.66 Toxoplasma_gondii|VI|49.m03339|Tg Annotation|Toxoplasma_gondii_T... 30 1.5 Toxoplasma_gondii|II|113.m00796|Tg Annotation|Toxoplasma_gondii_... 30 1.5 Toxoplasma_gondii|VIII|59.m07793|Tg Annotation|Toxoplasma_gondii... 30 1.5 Toxoplasma_gondii|Ib|25.m02918|Tg Annotation|Toxoplasma_gondii_T... 29 1.9 Toxoplasma_gondii|X|42.m03478|Tg Annotation|Toxoplasma_gondii_TI... 28 4.2 Toxoplasma_gondii|XII|38.m01061|Tg Annotation|Toxoplasma_gondii_... 28 4.2 Toxoplasma_gondii|X|42.m03605|Tg Annotation|Toxoplasma_gondii_TI... 28 4.2 Toxoplasma_gondii|V|76.m03433|Tg Annotation|Toxoplasma_gondii_TI... 28 5.5 Toxoplasma_gondii|XII|145.m00337|Tg Annotation|Toxoplasma_gondii... 28 5.5 Toxoplasma_gondii|XI|35.m00846|Tg Annotation|Toxoplasma_gondii_T... 27 7.2 Toxoplasma_gondii|VI|49.m05688|Tg Annotation|Toxoplasma_gondii_T... 27 7.2 Toxoplasma_gondii|XII|37.m00737|Tg Annotation|Toxoplasma_gondii_... 27 7.2 Toxoplasma_gondii|Ia|86.m00360|Tg Annotation|Toxoplasma_gondii_T... 27 7.2 Toxoplasma_gondii|XI|583.m05712|Tg Annotation|Toxoplasma_gondii_... 27 9.5 Toxoplasma_gondii|IX|541.m02040|Tg Annotation|Toxoplasma_gondii_... 27 9.5 Toxoplasma_gondii|XII|65.m01119|Tg Annotation|Toxoplasma_gondii_... 27 9.5 Toxoplasma_gondii|XI|583.m05775|Tg Annotation|Toxoplasma_gondii_... 27 9.5 >Toxoplasma_gondii|IX|57.m00002|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) glutathione/thioredoxin peroxidase, putative Length = 251 Score = 115 bits (288), Expect = 2e-26 Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 11/174 (6%) Frame = +3 Query: 375 FDPNQVK-SFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYR 551 F P+Q+ SF ++ D+ G E+ G+V + N S CGLT + K+F+EL +K Sbjct: 60 FAPDQIPVSFSTITFNDIYGVQRSLGEWDGKVKIVVNVASNCGLTKAHNKEFIELREKIG 119 Query: 552 DQGLQLLAFPSNSF-GQETGSASEIQSFVDRYGVTFPVFQKAPVNGPQTQPVFKYLKQNA 728 ++LAFPS F QE +E Q F +R + FPVF + VNGP+T PVF Y K N+ Sbjct: 120 TDAFEILAFPSRQFANQEFADIAETQQFCERVKIPFPVFTTSDVNGPETNPVFLYCKWNS 179 Query: 729 ---------SGSVFGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 S S + I WN+ KFL+D+D K + P+T P E+E +I +L+ Sbjct: 180 DSFYHPVKNSKSAKLSDIGWNYGKFLVDKDNGVYKYYGPRTKPLEMEEDIRKLI 233 >Toxoplasma_gondii|IX|57.m03094|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) glutathione/thioredoxin peroxidase, putative Length = 244 Score = 65.5 bits (158), Expect = 2e-11 Identities = 38/106 (35%), Positives = 60/106 (56%), Gaps = 6/106 (5%) Frame = +3 Query: 564 QLLAFPSNSF-GQETGSASEIQSFVDRYGVTFPVFQKAPVNGPQTQPVFKYLKQNA---- 728 ++LAFP + +E +I++F+ + V FPVF+ VNGP+T PVF Y K N+ Sbjct: 110 KILAFPCQQYVPEEYVHTEDIKTFLADHNVGFPVFEMTAVNGPETHPVFLYCKWNSDEFY 169 Query: 729 -SGSVFGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 G + N + +F KFL+D+D + K + P T P + +I +LL Sbjct: 170 RDGQL--NNLTGHFGKFLLDRDNRVYKFYPPDTNPLRLVEDIKKLL 213 >Toxoplasma_gondii|VIII|44.m02621|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) PHD-finger domain-containing protein Length = 743 Score = 34.7 bits (78), Expect = 0.045 Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 6/199 (3%) Frame = -2 Query: 583 DGKAKSCRPWSRYFLSNSTNCL*FTSVKPHC-----EPALNATQTRPLYSSNGTSFPFKS 419 DG+A RP S +S+S + S + C P+L+++ SS+ S F S Sbjct: 280 DGEASRGRPCS---VSSSPSTA--ASSRDLCPPLSSHPSLSSSSLSSSLSSSSLSSSFSS 334 Query: 418 TALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SG 239 ++LSS + S+SP+ S + + + + S SS + S+ S+ S Sbjct: 335 SSLSS---SSLSSSSSPSSSSSPSSSSSSLSSSSSLSSSSFSSSSLSSS---------SL 382 Query: 238 ASSSRTNTCLAXXXXXXXXXXXXXXXXXXFLSVGFDTTNTGVFFTEFHNMPCETLT*SS- 62 +SSS +++ L+ S + ++ + FH C + SS Sbjct: 383 SSSSLSSSSLSSSSLSSSSLSSSSLSSSSLSSASSSSLSSSSLSSSFHPSSCSSPQSSSP 442 Query: 61 KPPRDSASNTSSTLIMFPS 5 +PP S+ S L F S Sbjct: 443 QPPSALPSSFHSPLSAFSS 461 >Toxoplasma_gondii|XII|65.m01143|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) trichohyalin, putative Length = 1156 Score = 31.6 bits (70), Expect = 0.38 Identities = 15/55 (27%), Positives = 32/55 (58%) Frame = -2 Query: 379 SNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRTNT 215 S+SP+ S + + P+ S CSS + S++ ++P+ +++ S +SSS + + Sbjct: 22 SSSPSSSSSSSSSSSTSPSSSSCSSSSSSSSSSSTSPSSSSSSSSSSSSSSSSTS 76 >Toxoplasma_gondii|VIII|44.m02720|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) RNA polymerase Rpb1 C-terminal repeat domain-containing protein / exonuclease domain-containing protein Length = 1898 Score = 31.2 bits (69), Expect = 0.50 Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Frame = -2 Query: 391 TWFGSNSPTGSWIEAPAFVNE---PNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRT 221 T FG N+ G+ +PAF + P+ S SS S+ S+ + P+ + S ASSS + Sbjct: 1407 THFGGNTRRGNDFSSPAFSSSSSTPSASALSSSTSPASSPSSSASSPSASPASSASSSPS 1466 Query: 220 NT 215 ++ Sbjct: 1467 SS 1468 >Toxoplasma_gondii|VIII|44.m02543|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) zinc finger (C3HC4 type RING finger) protein, putative Length = 713 Score = 30.8 bits (68), Expect = 0.66 Identities = 23/94 (24%), Positives = 48/94 (51%) Frame = -2 Query: 511 TSVKPHCEPALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVN 332 +S P + +++ P S + +S P S + SS + + S+SP+ S + + + Sbjct: 479 SSSSPSASSSSSSSSPSPSSSPSCSSSPSSSPSSSSSSSSS--SSSSPSSSPSSSSSPSS 536 Query: 331 EPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASS 230 P+ S SS + S++ S+P+ +++ S +SS Sbjct: 537 SPSSSSSSSSSPSSSSSSSSPSSSSSSSSSSSSS 570 Score = 28.5 bits (62), Expect = 3.3 Identities = 23/91 (25%), Positives = 49/91 (53%) Frame = -2 Query: 487 PALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCS 308 P+ +++ + SS+ +S P S++ S + S+SP+ S + + + P+ SP S Sbjct: 475 PSFSSSSSPSASSSSSSSSPSPSSSPSCSSS----PSSSPSSSSSSSSSSSSSPSSSPSS 530 Query: 307 SEDLAESTTGSTPTDPNTNR*SGASSSRTNT 215 S S+ S+P+ +++ S +SSS +++ Sbjct: 531 S-----SSPSSSPSSSSSSSSSPSSSSSSSS 556 Score = 28.1 bits (61), Expect = 4.2 Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 3/168 (1%) Frame = -2 Query: 619 SLAEPVSCPNELDGKAKSCRPWSRYFLSNSTNCL*FTSVKPHCEPALNATQTRPLYSSNG 440 S A SC + G A S S LS + ++ P + + P +SS+ Sbjct: 425 SSAASHSCVSVSTGSASSS---SSALLSGTHESPLLATLTVPRSPLAQSVERVPSFSSS- 480 Query: 439 TSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTG---STP 269 S P S++ SS S SP+ S P+ + P+ SP SS + S++ S+P Sbjct: 481 -SSPSASSSSSS-------SSPSPSSS----PSCSSSPSSSPSSSSSSSSSSSSSPSSSP 528 Query: 268 TDPNTNR*SGASSSRTNTCLAXXXXXXXXXXXXXXXXXXFLSVGFDTT 125 + ++ S +SSS +++ + S F ++ Sbjct: 529 SSSSSPSSSPSSSSSSSSSPSSSSSSSSPSSSSSSSSSSSSSFSFSSS 576 >Toxoplasma_gondii|VI|49.m03339|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) serine/threonine-protein kinase, putative Length = 821 Score = 29.6 bits (65), Expect = 1.5 Identities = 17/50 (34%), Positives = 30/50 (60%) Frame = -2 Query: 376 NSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSS 227 +SP S +P+ + P+ SP SS + S++ S+P+ P+++ S SSS Sbjct: 61 SSPPSSPSSSPS--SSPSSSPSSSPSSSSSSSPSSPSSPSSSPSSSPSSS 108 >Toxoplasma_gondii|II|113.m00796|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) DNA gyrase subunit B, putative Length = 1148 Score = 29.6 bits (65), Expect = 1.5 Identities = 42/173 (24%), Positives = 77/173 (44%), Gaps = 8/173 (4%) Frame = +1 Query: 283 SCFLPSPRTSKVNGLVRSRKLEPRSKSQSVSLTRTKSSRSTNSALWI*TESLFHSKSTRA 462 SCF P+ + ++ S+ P + S S +R+ SSRS++ + S S+S+ + Sbjct: 25 SCFSPAGASPPLS----SQPSSPETTSSLSSSSRSSSSRSSSPRSSSSSRSSSSSRSSSS 80 Query: 463 VFVSRSMLARNAV*PM*TTSNLLNWTRST-----VTKVCNSWLSH-PTRLDKKLARLVKS 624 SRS +R++ + S+ +W+ + + + C+ H P+ D + +S Sbjct: 81 RSSSRSSSSRSS-----SRSSSSSWSSTLCQAVWIPRSCSLLSPHAPSSSDLSAFCVPQS 135 Query: 625 --NRLLTAMESLFQSSKRPL*MDLKRNPYSST*SKMHRVVCLATSSSGTSKSF 777 LLT + + K P L P+S + S + L++S S S SF Sbjct: 136 VNRNLLTTLPAFLPPLKLPK-SPLFPPPFSHSLSSSPSLSSLSSSLSSRSSSF 187 >Toxoplasma_gondii|VIII|59.m07793|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 787 Score = 29.6 bits (65), Expect = 1.5 Identities = 14/44 (31%), Positives = 25/44 (56%) Frame = -2 Query: 388 WFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPN 257 W PT S+ + + +P+HS SS+ ++ S+ GS+P P+ Sbjct: 160 WLLPPYPTSSYTNSSSASVQPSHSRLSSDYISVSSIGSSPLLPS 203 >Toxoplasma_gondii|Ib|25.m02918|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 4871 Score = 29.3 bits (64), Expect = 1.9 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -2 Query: 457 LYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWI 353 L+S N + P ++T L N W GS+S G W+ Sbjct: 1447 LFSFNPITLPRETTLLGYGNHRLWAGSSSSAGLWV 1481 >Toxoplasma_gondii|X|42.m03478|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) poly(A) polymerase, putative Length = 937 Score = 28.1 bits (61), Expect = 4.2 Identities = 42/162 (25%), Positives = 74/162 (45%), Gaps = 2/162 (1%) Frame = +1 Query: 295 PSPRTSKVNGLVRSRKLEPRSKSQSVSLTRTKSSRSTNSAL--WI*TESLFHSKSTRAVF 468 PSP + SRK P S S SL+ + S S++S+L + + S S S + Sbjct: 127 PSPPAPLSSPGTDSRKPSPSSSLSSSSLSFSSSLSSSSSSLSSFSLSSSSLSSSSLSSSS 186 Query: 469 VSRSMLARNAV*PM*TTSNLLNWTRSTVTKVCNSWLSHPTRLDKKLARLVKSNRLLTAME 648 +S S L+ ++ ++S+L + + + + + +S LS + L + L S+ L ++ Sbjct: 187 LSSSSLSSSSSLSFSSSSSLSSSSSLSSSSLSSSSLS-SSSLSSFSSSLSSSSSLSSSSS 245 Query: 649 SLFQSSKRPL*MDLKRNPYSST*SKMHRVVCLATSSSGTSKS 774 S SS L + S+ S CL++SS +S S Sbjct: 246 SSSSSSLSSSSSSLSSSSSLSS-SLSSSSSCLSSSSLSSSSS 286 >Toxoplasma_gondii|XII|38.m01061|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) acid phosphatase, putative Length = 431 Score = 28.1 bits (61), Expect = 4.2 Identities = 10/26 (38%), Positives = 14/26 (53%) Frame = -2 Query: 799 GLPSWSIKNFWKFHLMKLPNTLPDAF 722 G P W++ N+W +LM P AF Sbjct: 175 GYPKWTLPNWWYHYLMHFPANTGGAF 200 >Toxoplasma_gondii|X|42.m03605|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 3945 Score = 28.1 bits (61), Expect = 4.2 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -1 Query: 386 VRVKLTDWLLDRGSSFRERTKPFTLLVRGLGR 291 VRV LT+W++D G S + P+ LV L R Sbjct: 528 VRVDLTEWMIDYGKSASQ--TPYVWLVSSLNR 557 >Toxoplasma_gondii|V|76.m03433|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 920 Score = 27.7 bits (60), Expect = 5.5 Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 1/87 (1%) Frame = -2 Query: 511 TSVKPHCEPALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPT-GSWIEAPAFV 335 TSV+ E + TRP SS+ +F F S A S FG N T GS + Sbjct: 617 TSVEEREEKKRSGDSTRPTLSSSFAAFQFSSDARS-------FGLNRLTFGSSFSSLFTS 669 Query: 334 NEPNHSPCSSEDLAESTTGSTPTDPNT 254 + P SP S A +G+ +P++ Sbjct: 670 SSPPASPPPS-SFASFVSGAASPEPSS 695 >Toxoplasma_gondii|XII|145.m00337|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 1317 Score = 27.7 bits (60), Expect = 5.5 Identities = 31/137 (22%), Positives = 63/137 (45%) Frame = -2 Query: 637 STNDWISLAEPVSCPNELDGKAKSCRPWSRYFLSNSTNCL*FTSVKPHCEPALNATQTRP 458 S++ S + SC + L + S S S+S + +S+ +L+++ + Sbjct: 375 SSSSLSSSSSVSSCSSSLSSSSSSSS-LSSSSSSSSLSSSSSSSLSSSFSSSLSSSSSSS 433 Query: 457 LYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTG 278 SS+ +S S++ SS L+ S+S S + + + + S CSS + S++ Sbjct: 434 SLSSSSSSSSLSSSSSSS--SLSSSSSSSSLSSSSSSSSLSSSSSVSSCSSSLSSSSSSS 491 Query: 277 STPTDPNTNR*SGASSS 227 S + +++ S +SSS Sbjct: 492 SLSSSSSSSSLSSSSSS 508 Score = 26.9 bits (58), Expect = 9.5 Identities = 22/118 (18%), Positives = 50/118 (42%) Frame = -2 Query: 373 SPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRTNTCLAXXXX 194 SP S+I + + + + S CSS + S++ S + +++ S +SSS ++ + Sbjct: 368 SPLSSFISSSSLSSSSSVSSCSSSLSSSSSSSSLSSSSSSSSLSSSSSSSLSSSFSSSLS 427 Query: 193 XXXXXXXXXXXXXXFLSVGFDTTNTGVFFTEFHNMPCETLT*SSKPPRDSASNTSSTL 20 S+ ++++ + + + + + SS S S+ SS+L Sbjct: 428 SSSSSSSLSSSSSSS-SLSSSSSSSSLSSSSSSSSLSSSSSSSSLSSSSSVSSCSSSL 484 >Toxoplasma_gondii|XI|35.m00846|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 3029 Score = 27.3 bits (59), Expect = 7.2 Identities = 16/41 (39%), Positives = 23/41 (56%) Frame = -2 Query: 349 APAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSS 227 +P+ + P SP SS L+ S STP+ P+T+ SSS Sbjct: 503 SPSSSSSPPSSPSSSSSLSSS---STPSPPSTSSPPSTSSS 540 >Toxoplasma_gondii|VI|49.m05688|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) DNA polymerase-related Length = 3019 Score = 27.3 bits (59), Expect = 7.2 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 5/54 (9%) Frame = -2 Query: 355 IEAPAF-VNEPNHSPCSSEDLAESTTGSTPTD----PNTNR*SGASSSRTNTCL 209 + AP+ ++ P SPC++ L S S P D P+ R ASSS ++ CL Sbjct: 1208 LRAPSLRISAPLLSPCAALGLPPSPASSAPRDLCDSPSPRR--AASSSSSSACL 1259 >Toxoplasma_gondii|XII|37.m00737|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) conserved hypothetical protein Length = 2025 Score = 27.3 bits (59), Expect = 7.2 Identities = 20/55 (36%), Positives = 27/55 (49%) Frame = -1 Query: 506 GQTALRASIERDTNTALVLFEWNKLSVQIHSAEFVERLDLVRVKLTDWLLDRGSS 342 GQTAL S+E+ A +W L V SA V++L + L LL RG + Sbjct: 1300 GQTALTESLEKQEAAAKTAAKWKALYVSQQSA--VQQLREQLLTLQKSLLRRGDA 1352 >Toxoplasma_gondii|Ia|86.m00360|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 1829 Score = 27.3 bits (59), Expect = 7.2 Identities = 12/32 (37%), Positives = 21/32 (65%) Frame = +3 Query: 288 LSAKSSDEQGEWFGSFTKAGASIQEPVGEFDP 383 LS ++ ++Q T+AG+S +EP+G+ DP Sbjct: 523 LSTEAEEQQASAGPQKTRAGSSGREPLGDSDP 554 >Toxoplasma_gondii|XI|583.m05712|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) EF hand domain-containing protein Length = 5953 Score = 26.9 bits (58), Expect = 9.5 Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = -2 Query: 379 SNSPTGSWIEAPAFVNEP---NHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRT 221 ++S TG I P E N + CS+ + ST+ S+ + N++ S +SSS T Sbjct: 63 THSTTGRLIGQPRVGAETFSLNRNLCSTSSSSSSTSNSSSSTSNSSSSSSSSSSST 118 >Toxoplasma_gondii|IX|541.m02040|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 493 Score = 26.9 bits (58), Expect = 9.5 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 3/49 (6%) Frame = +2 Query: 383 EPSQVVLRTQRCG-FERKACSIRRVQGPCLCRVQC--WLAMRFDRCKLQ 520 +PSQ+ L F R S+ R+ PC CR+ C W R C ++ Sbjct: 33 DPSQIPLLFSSLSLFFRLFSSLLRLVSPCACRLDCSVWYLERAVLCSVR 81 >Toxoplasma_gondii|XII|65.m01119|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) uvrD/REP helicase domain-containing protein Length = 2851 Score = 26.9 bits (58), Expect = 9.5 Identities = 20/76 (26%), Positives = 38/76 (50%) Frame = -2 Query: 487 PALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCS 308 PA +RPL +S + P S++LSS + ++S + S + + + + + SP S Sbjct: 212 PASAPFHSRPLGASPSSISPSSSSSLSS-----YSCASSSSSSSLSSYSCASSSSSSPSS 266 Query: 307 SEDLAESTTGSTPTDP 260 S L+ ++ S + P Sbjct: 267 SSPLSTASRPSATSGP 282 >Toxoplasma_gondii|XI|583.m05775|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) helicase, putative Length = 741 Score = 26.9 bits (58), Expect = 9.5 Identities = 20/76 (26%), Positives = 40/76 (52%) Frame = -2 Query: 487 PALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCS 308 P ++ ++ S++ S P +S +LSS + L+ S+ + S A + P+ S C+ Sbjct: 42 PTVSVERSDSPSSNSVVSIPSRSPSLSSLSSLSSSPSSPSSLSRSCLSAARSSPSRSSCT 101 Query: 307 SEDLAESTTGSTPTDP 260 + L+ S + S+P+ P Sbjct: 102 A-SLSPSASDSSPSSP 116 Database: /home/amadoui/banque/toxo_gondii Posted date: Mar 30, 2007 3:41 PM Number of letters in database: 5,605,631 Number of sequences in database: 7793 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,479,704 Number of Sequences: 7793 Number of extensions: 203778 Number of successful extensions: 837 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 721 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 824 length of database: 5,605,631 effective HSP length: 95 effective length of database: 4,865,296 effective search space used: 1104422192 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)