BLASTX 2.2.9 [May-01-2004]
BLASTX 2.2.9 [May-01-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NX0AMYA3YC22CM1.SCF (idq=208218)
         (967 letters)

Database: /home/amadoui/banque/toxo_gondii 
           7793 sequences; 5,605,631 total letters

Searching................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Toxoplasma_gondii|VIII|59.m07745|Tg Annotation|Toxoplasma_gondii...    33   0.13 
Toxoplasma_gondii|VIII|59.m00067|Tg Annotation|Toxoplasma_gondii...    32   0.29 
Toxoplasma_gondii|VIIb|55.m05114|Tg Annotation|Toxoplasma_gondii...    32   0.38 
Toxoplasma_gondii|VIIa|20.m03898|Tg Annotation|Toxoplasma_gondii...    30   0.85 
Toxoplasma_gondii|VIII|59.m03358|Tg Annotation|Toxoplasma_gondii...    28   3.2  
Toxoplasma_gondii|VIIa|540.m00202|Tg Annotation|Toxoplasma_gondi...    28   4.2  
Toxoplasma_gondii|X|42.m00109|Tg Annotation|Toxoplasma_gondii_TI...    27   7.2  
Toxoplasma_gondii|XI|583.m05584|Tg Annotation|Toxoplasma_gondii_...    27   7.2  
Toxoplasma_gondii|VI|49.m05695|Tg Annotation|Toxoplasma_gondii_T...    27   7.2  
Toxoplasma_gondii|X|46.m01708|Tg Annotation|Toxoplasma_gondii_TI...    27   7.2  
Toxoplasma_gondii|VIIa|20.m03956|Tg Annotation|Toxoplasma_gondii...    27   7.2  
Toxoplasma_gondii|VIII|59.m03718|Tg Annotation|Toxoplasma_gondii...    27   7.2  
Toxoplasma_gondii|XI|583.m05496|Tg Annotation|Toxoplasma_gondii_...    27   7.2  
Toxoplasma_gondii|IX|80.m02353|Tg Annotation|Toxoplasma_gondii_T...    27   9.4  
Toxoplasma_gondii|IX|57.m01702|Tg Annotation|Toxoplasma_gondii_T...    27   9.4  

>Toxoplasma_gondii|VIII|59.m07745|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           conserved hypothetical protein
          Length = 299

 Score = 33.1 bits (74), Expect = 0.13
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -2

Query: 351 TKPWLPP*LISGSKRMVPP*DPPLPSAFLYVPDECHAKRT 232
           T+P LPP    G+  +VPP  PPLP    + P + + KRT
Sbjct: 246 TEPLLPP---GGTLPLVPPGGPPLPLLLRWRPKKSYKKRT 282


>Toxoplasma_gondii|VIII|59.m00067|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 2972

 Score = 32.0 bits (71), Expect = 0.29
 Identities = 20/77 (25%), Positives = 31/77 (40%)
 Frame = +3

Query: 96   FPPRSFLPRRHPRPSSTRKRMQSTWPKFAPISLT*LTKTARLPQRSFVWRGTRLVHTRKQ 275
            FPPR F P   P  S + +    +W +  P+         RLP+R+       L+  R  
Sbjct: 2267 FPPRCFSPVYSPAESDSVEESPESWARCGPVP----EPAHRLPRRTTRLHSVELMERRSS 2322

Query: 276  MAAVDLKVGPSASTLKS 326
              +   +  PS  +L S
Sbjct: 2323 EGSPHSRTRPSPYSLHS 2339


>Toxoplasma_gondii|VIIb|55.m05114|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 972

 Score = 31.6 bits (70), Expect = 0.38
 Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 7/41 (17%)
 Frame = +1

Query: 4   HRPSNCSSSSC-------PQLYIGFELQPHEEIVCCGDFRR 105
           H P +C SSSC       P L+   +  P + IVC GD  R
Sbjct: 31  HSPPSCESSSCSAASVSPPHLFRCLDSVPRQSIVCVGDGTR 71


>Toxoplasma_gondii|VIIa|20.m03898|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 457

 Score = 30.4 bits (67), Expect = 0.85
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -2

Query: 903 WAKSLGHTSSSLAYNLTYFLKDESHKRAMSAGSIIKSPVGSSYC 772
           W KSLG T    A  + +  +D +     SA S++ +PV + YC
Sbjct: 280 WVKSLGTTDEEPAVAVPFVTEDAAKLLWKSACSLVANPVVAFYC 323


>Toxoplasma_gondii|VIII|59.m03358|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 329

 Score = 28.5 bits (62), Expect = 3.2
 Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
 Frame = +2

Query: 479 GRKDAKSGKESTPDDRLPD-ADKGSKPKTIGHI-RDVFYRMGFNDREIVALV 628
           G+K+  +GK+ TP D  P+ +DK +  + I  + + +  ++ + D+E+   V
Sbjct: 199 GKKETPAGKKETPADEKPESSDKQTTAQLIDSLSKQMIIKLNYVDKELTGKV 250


>Toxoplasma_gondii|VIIa|540.m00202|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding) SWIM
            zinc finger domain-containing protein
          Length = 6036

 Score = 28.1 bits (61), Expect = 4.2
 Identities = 22/82 (26%), Positives = 36/82 (43%)
 Frame = -1

Query: 397  VGVLCLDSFEFFNHNDQTMVATVIDFRVEADGPTLRSTAAICFLVCTRRVPRQTNERWGK 218
            +G  C+D+ E  +    +    V+ F   A    L  +AA+C    T+  PR+  ER   
Sbjct: 2683 IGAFCVDAGEDADRCGSSRDGEVLPFTWAAPTLALLPSAALC----TQWEPRRRGERPQA 2738

Query: 217  RAVFVNQVNDIGANFGQVDCIR 152
            R   V   ++ G   G++D  R
Sbjct: 2739 RTFDVAPSSEEGTQAGRLDQAR 2760


>Toxoplasma_gondii|X|42.m00109|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 561

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 19/57 (33%), Positives = 29/57 (50%)
 Frame = -2

Query: 234 TNVGASELSLSIKSTISARTLAKSTAFAFAWRTVEDAAVAKRNAAEIATADDFFVRL 64
           T+V +S  S S     S+   + S+A   A R V+D  V +R +   A A D F+R+
Sbjct: 324 TSVLSSHCSASCSGPSSSSRSSSSSALRCA-REVQDDTVGRRRSTSAAEAADRFLRV 379


>Toxoplasma_gondii|XI|583.m05584|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding) zinc
           finger (C3HC4 type RING finger) protein, putative
          Length = 2201

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 72  RRNRLLWRFPPRSFLPRRHPRPSSTRKRMQSTWPKFAPISLT*LTKTARLPQ 227
           ++ +LL R PP    PR+ PRP ++      + P+ +P S   L+   R+ Q
Sbjct: 411 KKTKLLCRCPP----PRKRPRPVTSSLLSPGSEPQASPPSSLSLSSRLRVDQ 458


>Toxoplasma_gondii|VI|49.m05695|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 2886

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = -2

Query: 528  KRSSGVDSLPLLASLRPKWNGTSGPPISE 442
            +R   + S P+L  LRP+ +G   PP+++
Sbjct: 2497 ERQDDLSSQPILEELRPRSDGDGEPPVAQ 2525


>Toxoplasma_gondii|X|46.m01708|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 1424

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = -2

Query: 552 LEPLSASGKRSSGVDSLPLLASLRPKWNGTSGPPISEMATTP 427
           L P S S   S G  SL  ++ LRP W  T+ PP +  A  P
Sbjct: 174 LSPESLSSWSSRG--SLDRVSLLRPAWLPTAAPPTASGAPEP 213


>Toxoplasma_gondii|VIIa|20.m03956|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           metacaspase-related
          Length = 742

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +3

Query: 507 SPPQMTVCQMPTRAPSPRPSATFATCFTAWDSTTAK 614
           +P Q T  ++P +AP P       T    WD+T  K
Sbjct: 279 APQQPTCVEVPPQAPRPSIQQATVTASGHWDATAIK 314


>Toxoplasma_gondii|VIII|59.m03718|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 3052

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
 Frame = +3

Query: 510  PPQMTVCQMPTRAPS--PRPSATFA 578
            PPQM +  MP R P   PRPSA+FA
Sbjct: 1941 PPQMEL--MPPRCPDAEPRPSASFA 1963


>Toxoplasma_gondii|XI|583.m05496|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           collagen alpha 2(XI)-related
          Length = 888

 Score = 27.3 bits (59), Expect = 7.2
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -2

Query: 387 FALTASSFSITMTKPWLPP*LISGSKRMVPP*DPPLPSA 271
           F + +SS  I+M KP++P    SGS+   PP  P  P A
Sbjct: 21  FQVGSSSPGISMQKPFVPRSSFSGSEIAAPPLLPEGPFA 59


>Toxoplasma_gondii|IX|80.m02353|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding) MORN
           repeat-containing protein
          Length = 465

 Score = 26.9 bits (58), Expect = 9.4
 Identities = 17/53 (32%), Positives = 23/53 (43%)
 Frame = +2

Query: 362 EKLEAVKAKHPNITYADLYVYAGVVAISEMGGPEVPFHLGRKDAKSGKESTPD 520
           EK EA    HP ++ A      G    +E GG E     G  +AK+G  +  D
Sbjct: 58  EKTEA----HPELSAAPEEQQGGATGSAEAGGAEASGEAGTAEAKTGDAAEGD 106


>Toxoplasma_gondii|IX|57.m01702|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 2524

 Score = 26.9 bits (58), Expect = 9.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +3

Query: 126 HPRPSSTRKRMQSTWPKFAPISLT*LTKTARLPQR 230
           HPRPSS+     S+    AP+S +  + ++  PQR
Sbjct: 183 HPRPSSSSSSASSSSSSSAPLSSSSSSSSSSPPQR 217


  Database: /home/amadoui/banque/toxo_gondii
    Posted date:  Mar 30, 2007  3:41 PM
  Number of letters in database: 5,605,631
  Number of sequences in database:  7793
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,527,076
Number of Sequences: 7793
Number of extensions: 288249
Number of successful extensions: 1186
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 5,605,631
effective HSP length: 95
effective length of database: 4,865,296
effective search space used: 1099556896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)