BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig1815 NX0AMYA13YF12CM1.SCF NX0AMYA13YJ03CM1.SCF (890 letters) Database: /home/amadoui/banque/toxo_gondii 7793 sequences; 5,605,631 total letters Searching................done Score E Sequences producing significant alignments: (bits) Value Toxoplasma_gondii|IX|57.m00002|Tg Annotation|Toxoplasma_gondii_T... 93 1e-19 Toxoplasma_gondii|IX|57.m03094|Tg Annotation|Toxoplasma_gondii_T... 63 1e-10 Toxoplasma_gondii|X|46.m02914|Tg Annotation|Toxoplasma_gondii_TI... 32 0.34 Toxoplasma_gondii|IV|641.m01549|Tg Annotation|Toxoplasma_gondii_... 25 0.43 Toxoplasma_gondii|III|52.m01679|Tg Annotation|Toxoplasma_gondii_... 29 2.2 Toxoplasma_gondii|X|42.m03364|Tg Annotation|Toxoplasma_gondii_TI... 29 2.2 Toxoplasma_gondii|X|42.m03390|Tg Annotation|Toxoplasma_gondii_TI... 28 2.9 Toxoplasma_gondii|Ib|25.m02942|Tg Annotation|Toxoplasma_gondii_T... 28 2.9 Toxoplasma_gondii|VIII|59.m03591|Tg Annotation|Toxoplasma_gondii... 28 3.8 Toxoplasma_gondii|VI|49.m03207|Tg Annotation|Toxoplasma_gondii_T... 28 3.8 Toxoplasma_gondii|VIIa|20.m03990|Tg Annotation|Toxoplasma_gondii... 28 3.8 Toxoplasma_gondii|VIIb|55.m05065|Tg Annotation|Toxoplasma_gondii... 28 3.8 Toxoplasma_gondii|XII|65.m01143|Tg Annotation|Toxoplasma_gondii_... 27 6.5 Toxoplasma_gondii|VIII|59.m00027|Tg Annotation|Toxoplasma_gondii... 27 6.5 Toxoplasma_gondii|X|42.m03281|Tg Annotation|Toxoplasma_gondii_TI... 27 6.5 Toxoplasma_gondii|VIII|59.m03379|Tg Annotation|Toxoplasma_gondii... 27 8.4 >Toxoplasma_gondii|IX|57.m00002|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) glutathione/thioredoxin peroxidase, putative Length = 251 Score = 93.2 bits (230), Expect = 1e-19 Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 11/153 (7%) Frame = +1 Query: 166 QYRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIM 345 ++ G+V +VVNVAS GLT+ + + L K EILAFP QF QE + Sbjct: 86 EWDGKVKIVVNVASNCGLTKAHNKEFIELREKIGTDAFEILAFPSRQFANQEFADIAETQ 145 Query: 346 EFVKTFGITFQFFNKCDVNGDNTVPVFQY-----------LKHHLSGLLGNFIKWNFTKF 492 +F + I F F DVNG T PVF Y +K+ S L + I WN+ KF Sbjct: 146 QFCERVKIPFPVFTTSDVNGPETNPVFLYCKWNSDSFYHPVKNSKSAKLSD-IGWNYGKF 204 Query: 493 LVDREGQPFKRYSPQTAPNDFEGDIVELLSKQA 591 LVD++ +K Y P+T P + E DI +L++ QA Sbjct: 205 LVDKDNGVYKYYGPRTKPLEMEEDIRKLIAGQA 237 >Toxoplasma_gondii|IX|57.m03094|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) glutathione/thioredoxin peroxidase, putative Length = 244 Score = 62.8 bits (151), Expect = 1e-10 Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 5/106 (4%) Frame = +1 Query: 280 EILAFPCNQFGGQEPGTNEKIMEFVKTFGITFQFFNKCDVNGDNTVPVFQYLK-----HH 444 +ILAFPC Q+ +E E I F+ + F F VNG T PVF Y K + Sbjct: 110 KILAFPCQQYVPEEYVHTEDIKTFLADHNVGFPVFEMTAVNGPETHPVFLYCKWNSDEFY 169 Query: 445 LSGLLGNFIKWNFTKFLVDREGQPFKRYSPQTAPNDFEGDIVELLS 582 G L N + +F KFL+DR+ + +K Y P T P DI +LL+ Sbjct: 170 RDGQLNN-LTGHFGKFLLDRDNRVYKFYPPDTNPLRLVEDIKKLLN 214 >Toxoplasma_gondii|X|46.m02914|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 847 Score = 31.6 bits (70), Expect = 0.34 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = +2 Query: 332 TKRSWNLSRRLASRFNSSTSVMSMATTRCQCFST*STTSRDSWAXXXXXXXXXXXXXXXX 511 T SW+L+R ++RF ST S +++ CF T S++S S Sbjct: 19 TAESWSLTRFSSTRF--STFRPSASSSPASCFPTSSSSSSSSSQSSGAPSSSSPPSPASP 76 Query: 512 XXXXDTVPRPP-PTTSKATLSSSCP 583 P PP P +S ++ S S P Sbjct: 77 FSSSSPYPPPPSPPSSSSSPSPSFP 101 >Toxoplasma_gondii|IV|641.m01549|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 752 Score = 25.0 bits (53), Expect(2) = 0.43 Identities = 9/20 (45%), Positives = 13/20 (65%) Frame = +3 Query: 264 PQSRLGNPSIPLQSVWRSRT 323 P + G P +P+Q WRS+T Sbjct: 305 PPASTGVPLVPVQGQWRSQT 324 Score = 24.6 bits (52), Expect(2) = 0.43 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Frame = +3 Query: 399 QWRQHGASVSVPEAPPLGTPGQLYQVELYQVPRRS-RGPTVQAIQSPDRPQRLRRRH 566 QWR A +V P +G+P L + VP + + P +Q +P Q + R+ Sbjct: 319 QWRSQTAGPAVVVTPSVGSPVLLMPSQAQAVPATTQQKPHLQTNTTPTPSQVTQTRN 375 >Toxoplasma_gondii|III|52.m01679|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) conserved hypothetical protein Length = 1204 Score = 28.9 bits (63), Expect = 2.2 Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 10/66 (15%) Frame = +3 Query: 405 RQHGASVSVPEAPPLGT--PGQLYQV--------ELYQVPRRSRGPTVQAIQSPDRPQRL 554 R+ GA+ S P+ LG PGQ V +LY P R GP + P P L Sbjct: 988 RRRGATSSEPKREALGALRPGQAQNVAELQEQWEKLYLKPERRLGPLAATDRMPILPFSL 1047 Query: 555 RRRHCR 572 H R Sbjct: 1048 SNEHRR 1053 >Toxoplasma_gondii|X|42.m03364|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) GTP-binding protein, putative Length = 451 Score = 28.9 bits (63), Expect = 2.2 Identities = 25/71 (35%), Positives = 31/71 (43%), Gaps = 13/71 (18%) Frame = +1 Query: 235 TQLAALDAKYRNQGLEILAFPCNQFGGQEPGT---------NEKIMEFVKTF-GITFQF- 381 T L DA+ R +G + A P EP E++ME VK F + F F Sbjct: 191 TVLRTFDARLR-KGPAVSAEPTKYEEDWEPRNLGNDLTAWDKERVMELVKVFVELRFPFV 249 Query: 382 --FNKCDVNGD 408 NKCDV GD Sbjct: 250 LVLNKCDVGGD 260 >Toxoplasma_gondii|X|42.m03390|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) conserved hypothetical protein Length = 1551 Score = 28.5 bits (62), Expect = 2.9 Identities = 18/66 (27%), Positives = 31/66 (46%) Frame = -3 Query: 879 FXXVMMAHERHTVKNEQYVLSLS*LEPHKATAQLARLKPTQKVSLAVQDCILKTLLTSRL 700 F ++AH+RH V + L E TA RLK ++ I ++ +SR+ Sbjct: 247 FLHFLLAHDRHLVSTSPFSSRLFIFEADAPTATTQRLKALGSGTVPTFFEIRESFDSSRM 306 Query: 699 EEESVI 682 E+S++ Sbjct: 307 TEDSLL 312 >Toxoplasma_gondii|Ib|25.m02942|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 589 Score = 28.5 bits (62), Expect = 2.9 Identities = 19/64 (29%), Positives = 31/64 (48%) Frame = +3 Query: 360 VWHHVSILQQV*CQWRQHGASVSVPEAPPLGTPGQLYQVELYQVPRRSRGPTVQAIQSPD 539 VW Q + ++ + VS+ E P GTP +++Q V RR R + QA ++ + Sbjct: 339 VWCITRFDQMIFSKFARKRTDVSMGEIPLGGTPSEVFQ---SSVRRRERTRSEQADEAHE 395 Query: 540 RPQR 551 P R Sbjct: 396 TPSR 399 >Toxoplasma_gondii|VIII|59.m03591|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 2777 Score = 28.1 bits (61), Expect = 3.8 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSKNSLK 637 PR P+ S S P + P ++PR+ PS++ K Sbjct: 462 PRQSPSQSPRQSPSESPRQSPSQSPRQSPSQSPPK 496 Score = 27.7 bits (60), Expect = 4.9 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 PR P+ S S P + P ++PR+ PS++ Sbjct: 454 PRQSPSQSPRQSPSQSPRQSPSESPRQSPSQS 485 Score = 27.7 bits (60), Expect = 4.9 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 PR P+ S S P + P ++PR+ PS++ Sbjct: 438 PRQSPSPSPPMSPSQSPRQSPSQSPRQSPSQS 469 >Toxoplasma_gondii|VI|49.m03207|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) protein kinase domain-containing protein Length = 2483 Score = 28.1 bits (61), Expect = 3.8 Identities = 14/39 (35%), Positives = 20/39 (51%) Frame = +1 Query: 511 QPFKRYSPQTAPNDFEGDIVELLSKQAPREESKEEAKQE 627 +P KR + AP+D GD L+ ++ EE EE E Sbjct: 1596 EPPKRRTDGDAPDDTRGDCDRLMMEEGEDEEETEEEPSE 1634 >Toxoplasma_gondii|VIIa|20.m03990|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 547 Score = 28.1 bits (61), Expect = 3.8 Identities = 21/83 (25%), Positives = 39/83 (46%) Frame = -3 Query: 363 KRLDKFHDLFVRARFLTSKLIAREC*DFQALIAVFRIKSGELSVVELRQASLRRDVHNKT 184 + ++K +L + L ++ + + Q+L A K+ EL V+ + L++DV Sbjct: 459 EEMEKKVELLQTDKLLLARAVKAQHERIQSLQAALSEKTTELERVQGEKRVLQQDVQKIK 518 Query: 183 DAATVLYLLIGTVWPAISTADNS 115 DAA L L ++ S DN+ Sbjct: 519 DAAAALLLGSSSLRAGSSCRDNN 541 >Toxoplasma_gondii|VIIb|55.m05065|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) gamma-tubulin complex component 2, putative Length = 1802 Score = 28.1 bits (61), Expect = 3.8 Identities = 13/23 (56%), Positives = 15/23 (65%) Frame = +3 Query: 183 LSCCERRVAVRLDATQLHSTRRS 251 L CC RR VR A +LHS+R S Sbjct: 170 LLCCPRRTEVRQFAQRLHSSRTS 192 >Toxoplasma_gondii|XII|65.m01143|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) trichohyalin, putative Length = 1156 Score = 27.3 bits (59), Expect = 6.5 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +3 Query: 528 QSPDRPQRLRRRH-CRALVQTSAQGRIQGGSQARIA*NDVE 647 Q P+R + LRRRH CR +TS + R S+ R A +D E Sbjct: 267 QQPERSRSLRRRHSCR---RTSRRRRSNEDSRERDAASDAE 304 >Toxoplasma_gondii|VIII|59.m00027|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) MIF4G domain-containing protein Length = 633 Score = 27.3 bits (59), Expect = 6.5 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +2 Query: 23 TGRIMSRWSLFGRRASSQSS-GDDPTKAKSFFELSAVDMAGQTVPMSKYSTVAAS 184 TG SL GR + SS D ++ KS E +A + T PMS+ VAA+ Sbjct: 432 TGSASGPSSLLGRAPAEPSSPAKDSSRRKSGGEPAAPKTSSGTAPMSEEQQVAAA 486 >Toxoplasma_gondii|X|42.m03281|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) thrombospondin type 1 domain-containing protein Length = 4352 Score = 27.3 bits (59), Expect = 6.5 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +3 Query: 330 ERKDHGICQDVWHHVSILQQV*CQWRQHGASVSVPEAPPLGT 455 E +D G C D+ H V +L+ + R + P+ PP T Sbjct: 591 EWEDWGECADLCHQVGVLEPI--TTRSRAVLLEAPDCPPPST 630 >Toxoplasma_gondii|VIII|59.m03379|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 2910 Score = 26.9 bits (58), Expect = 8.4 Identities = 19/58 (32%), Positives = 25/58 (43%) Frame = +3 Query: 135 WLAKPYR*ASTVPWPRLSCCERRVAVRLDATQLHSTRRS*CEIPQSRLGNPSIPLQSV 308 W A Y A T PW L+ E L + + +R +P S L PS PL S+ Sbjct: 925 WAAAHYAAALTAPWYHLALLELPPTDHLHPLAVPNAKRPGLALPVSAL-PPSAPLLSL 981 Database: /home/amadoui/banque/toxo_gondii Posted date: Mar 30, 2007 3:41 PM Number of letters in database: 5,605,631 Number of sequences in database: 7793 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,852,963 Number of Sequences: 7793 Number of extensions: 232000 Number of successful extensions: 1050 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 873 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1044 length of database: 5,605,631 effective HSP length: 94 effective length of database: 4,873,089 effective search space used: 984363978 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)