BLASTX 2.2.9 [May-01-2004]
BLASTX 2.2.9 [May-01-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig1251 NX0AMYA11YO17CM1.SCF NX0AMYA6YE11CM1.SCF
NX0AINT4YG07CM1.SCF
         (1121 letters)

Database: /home/amadoui/banque/toxo_gondii 
           7793 sequences; 5,605,631 total letters

Searching................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Toxoplasma_gondii|V|39.m00362|Tg Annotation|Toxoplasma_gondii_TI...    30   1.8  
Toxoplasma_gondii|IX|80.m02121|Tg Annotation|Toxoplasma_gondii_T...    28   4.0  
Toxoplasma_gondii|X|42.m03425|Tg Annotation|Toxoplasma_gondii_TI...    28   4.0  
Toxoplasma_gondii|VIII|59.m03550|Tg Annotation|Toxoplasma_gondii...    28   5.2  
Toxoplasma_gondii|XII|50.m03171|Tg Annotation|Toxoplasma_gondii_...    28   5.2  
Toxoplasma_gondii|IX|541.m01187|Tg Annotation|Toxoplasma_gondii_...    28   5.2  
Toxoplasma_gondii|IV|162.m00324|Tg Annotation|Toxoplasma_gondii_...    28   5.2  
Toxoplasma_gondii|VIIb|55.m05107|Tg Annotation|Toxoplasma_gondii...    28   5.2  
Toxoplasma_gondii|XI|583.m05537|Tg Annotation|Toxoplasma_gondii_...    28   6.8  
Toxoplasma_gondii|III|52.m01609|Tg Annotation|Toxoplasma_gondii_...    27   8.8  
Toxoplasma_gondii|XII|65.m01117|Tg Annotation|Toxoplasma_gondii_...    27   8.8  
Toxoplasma_gondii|III|64.m00001|Tg Annotation|Toxoplasma_gondii_...    27   8.8  
Toxoplasma_gondii|VIIb|55.m04811|Tg Annotation|Toxoplasma_gondii...    27   8.8  
Toxoplasma_gondii|VIII|59.m03396|Tg Annotation|Toxoplasma_gondii...    27   8.8  

>Toxoplasma_gondii|V|39.m00362|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 1618

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -2

Query: 598 GLLPLSASGKRP-SGVHSAPDSASLRPKWNLTSGPPISAMATTP 470
           G+  L+AS   P S V S P SAS  P  + ++ PP S+ +++P
Sbjct: 78  GMASLTASNSPPFSSVSSHPHSASASPPPSSSASPPPSSSSSSP 121


>Toxoplasma_gondii|IX|80.m02121|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 622

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
 Frame = -2

Query: 610 LIVFGLLPLSASGKRPSGVHSAPDSASLRPKWN-LT--SGP 497
           +IV+GL PL+ +G   SG+  +PD+   R   N LT  SGP
Sbjct: 16  VIVYGLWPLAVAGPWSSGILDSPDTGRWRGHANGLTDSSGP 56


>Toxoplasma_gondii|X|42.m03425|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           gtr1/ragA G protein domain-containing protein
          Length = 569

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 42/188 (22%), Positives = 75/188 (39%)
 Frame = -2

Query: 949 ALAKSLCHNSSSLAYNSTYFLNSGSQMKAMSAGNIMSSPVGSVYCSGPFHFFKVHLFSMS 770
           AL+    H++SS+A  S    +S S ++++S+ +  + P      S  FH       S S
Sbjct: 117 ALSDRRSHSASSVASRSPVASSSSSALRSVSSSSSFAGPRALSSSSAVFH-------SPS 169

Query: 769 SR*YSLENVHSARVQGPL*PLRVG*QRPTAWAPMRATISRSLNPMR*KISRTWLIVFGLL 590
           S   S      +    P+  +R     P    P  ++++   +P     +     +  L 
Sbjct: 170 SSSASPAQTLQSGSSHPVLDVRSS-SSPALLHPFSSSLAARRSPASSCCAVPSCPLSALC 228

Query: 589 PLSASGKRPSGVHSAPDSASLRPKWNLTSGPPISAMATTPANTYKSA*EMLG*RSLIASS 410
           P SA           PDS+   P  N  +  P+S+  +  A+  +SA  +     L  +S
Sbjct: 229 PSSAP---------VPDSSVRIPPSNRLAAVPLSSSVSLSASDRRSAAHLPTRIPLSPAS 279

Query: 409 LSTAVFKP 386
           +S +  KP
Sbjct: 280 VSVSPSKP 287


>Toxoplasma_gondii|VIII|59.m03550|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding) cell
            wall protein-related
          Length = 1572

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +3

Query: 522  GRKDA--ESGAECTPDGR-LPDADKGSKPNTINHVREIFYRMGFNDREIVALIGAHAVGR 692
            GRKD+  ++GA  TP GR +P    G+   +I+         GFND             R
Sbjct: 1107 GRKDSRGDAGAWGTPAGRVMPGRGPGTSEGSID-------MGGFNDGT-----------R 1148

Query: 693  CYPTRSGYSG 722
            C+P RSG  G
Sbjct: 1149 CHPRRSGTGG 1158


>Toxoplasma_gondii|XII|50.m03171|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            conserved hypothetical protein
          Length = 2303

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 5    NVPSSCLPCDQIERDRSRDGSPC 73
            ++  +CLPC + ++DR R G  C
Sbjct: 1210 HLAGTCLPCSEYKQDRCRRGDSC 1232


>Toxoplasma_gondii|IX|541.m01187|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           RNA-metabolising metallo-beta-lactamase
           domain-containing protein
          Length = 1025

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = -2

Query: 583 SASGKRPSGVHSAPDSASLRPKWNLTSGPPISAMATTPANTYKSA 449
           S+S   PS   S+P S+S     + +S  P S+ +++PA++  S+
Sbjct: 759 SSSSSSPSSSSSSPSSSSSSSPASSSSSSPASSSSSSPASSSSSS 803


>Toxoplasma_gondii|IV|162.m00324|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 2008

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = +3

Query: 564  GRLPDADKGSKPNTINHVREIFYRMGFND----REIVALIGAHAVGRCYPTRSGYSGPWT 731
            G++P A   S   T++HV       G       R+  A +  HA G   P+      P+T
Sbjct: 836  GQVPGAGSSSPVRTVSHVETSEIPSGVRHELTLRQNQAQVAPHATGATLPSAGADYSPYT 895

Query: 732  RAEWTFSNE 758
              ++ F ++
Sbjct: 896  LLDFCFLDD 904


>Toxoplasma_gondii|VIIb|55.m05107|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 4532

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -2

Query: 571 KRPSGVHSAPDSASLRPKWNLTSGPPISAMATTPANTYKS 452
           +RPS V S P+  + +PK +   G P++  ATT A   K+
Sbjct: 69  RRPSQVRSEPE-VTKQPKVSSEKGTPVAEKATTKATPAKN 107


>Toxoplasma_gondii|XI|583.m05537|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 1339

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 592 LPLSASGKRPSGVHSAPDSASLRPKWNLTSGPPISAMATTPANTY 458
           +P   S +R SGVH A D         L +G P+S     P+++Y
Sbjct: 133 VPPPVSSRRFSGVHIAADKEEPATLPPLEAGTPVSKSDLCPSSSY 177


>Toxoplasma_gondii|III|52.m01609|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 8002

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -1

Query: 191  GLQHSHGSTRCDKESS*DGGSVNLLGRS*CSRRGEAAGCGTGSHHASG 48
            GL    G   CD+ +  +GG+ ++   +  S RG A    TG    SG
Sbjct: 2533 GLGSESGLGSCDRRTDAEGGTTSVSSAAEQSERGAAEEGQTGEQERSG 2580


>Toxoplasma_gondii|XII|65.m01117|Tg
            Annotation|Toxoplasma_gondii_TIGR|(protein coding)
            hypothetical protein
          Length = 1797

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 25/69 (36%), Positives = 33/69 (47%)
 Frame = -2

Query: 1030 SPRGPKKM*RRQPFFSKLQPFSVSFWKALAKSLCHNSSSLAYNSTYFLNSGSQMKAMSAG 851
            SPRGP    +     S L  FS S   +   S   +SSSL+ +ST  L+S S   + SA 
Sbjct: 175  SPRGPPAPDKSPSLNSTLSTFSSSSSSSCPSSC--SSSSLSASST--LSSSSSATSSSAS 230

Query: 850  NIMSSPVGS 824
            +  SS   S
Sbjct: 231  SSFSSSSSS 239


>Toxoplasma_gondii|III|64.m00001|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding) p97
           protein
          Length = 877

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 19/51 (37%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
 Frame = +3

Query: 696 YPTRSGYSGPWTRAEWTFSNEYYRELIENKWT--LKKWKGP--EQYTDPTG 836
           Y T+ G S P T  EW    E  +     KW+   K  KGP  E   DP G
Sbjct: 285 YNTKKGVSLPATYEEWVQLPEQQKGAASFKWSSWRKTHKGPLAEVLADPEG 335


>Toxoplasma_gondii|VIIb|55.m04811|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding)
           hypothetical protein
          Length = 853

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +3

Query: 525 RKDAESGAECTPDGRLPDADKGSK 596
           R+ AESG E  P GR  +AD+ S+
Sbjct: 264 REPAESGVESEPQGRAQNADRVSR 287


>Toxoplasma_gondii|VIII|59.m03396|Tg
           Annotation|Toxoplasma_gondii_TIGR|(protein coding) clp
           ATP-binding chain B1, putative
          Length = 981

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 23/112 (20%)
 Frame = +3

Query: 192 KDQPVDLPKIRSEIVSLIEK-----DN---YLGPTL---------VRLAWHS---SGTYX 311
           K   VDL K+RS +V  +E+     DN    LGP L         +RL WH    S  + 
Sbjct: 120 KQAGVDLDKLRSGVVDFVERHPTVSDNSTRTLGPVLQKVLSSANSLRLQWHDEYISVEHL 179

Query: 312 XXXXXXXXXXXTIRFDPEINHGANAGLNTAVDKLEA---IKERYPNISYADL 458
                       +RF  E    AN  +  A+  +     +  + P +SY  L
Sbjct: 180 AAALADEDSRFLVRFLKESKLTAN-DIRQAIKAIRGTRRVNTKTPEVSYQSL 230


  Database: /home/amadoui/banque/toxo_gondii
    Posted date:  Mar 30, 2007  3:41 PM
  Number of letters in database: 5,605,631
  Number of sequences in database:  7793
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,268,661
Number of Sequences: 7793
Number of extensions: 298812
Number of successful extensions: 1134
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 5,605,631
effective HSP length: 96
effective length of database: 4,857,503
effective search space used: 1345528331
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)