BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig1160 NX0AINT3YA24CM1.SCF NX0AINT26YO23CM1.SCF NX0AINT22YN24CM1.SCF (985 letters) Database: /home/amadoui/banque/toxo_gondii 7793 sequences; 5,605,631 total letters Searching................done Score E Sequences producing significant alignments: (bits) Value Toxoplasma_gondii|VIII|44.m00005|Tg Annotation|Toxoplasma_gondii... 373 e-104 Toxoplasma_gondii|VIIa|20.m05984|Tg Annotation|Toxoplasma_gondii... 33 0.14 Toxoplasma_gondii|VIIa|20.m03896|Tg Annotation|Toxoplasma_gondii... 31 0.67 Toxoplasma_gondii|X|42.m03339|Tg Annotation|Toxoplasma_gondii_TI... 30 0.88 Toxoplasma_gondii|XII|50.m03400|Tg Annotation|Toxoplasma_gondii_... 30 1.1 Toxoplasma_gondii|VIIa|20.m03736|Tg Annotation|Toxoplasma_gondii... 30 1.5 Toxoplasma_gondii|XI|583.m00711|Tg Annotation|Toxoplasma_gondii_... 30 1.5 Toxoplasma_gondii|V|76.m01552|Tg Annotation|Toxoplasma_gondii_TI... 29 1.9 Toxoplasma_gondii|XII|37.m00772|Tg Annotation|Toxoplasma_gondii_... 29 2.5 Toxoplasma_gondii|VIIb|55.m04751|Tg Annotation|Toxoplasma_gondii... 26 2.8 Toxoplasma_gondii|X|42.m07385|Tg Annotation|Toxoplasma_gondii_TI... 28 4.3 Toxoplasma_gondii|X|42.m03599|Tg Annotation|Toxoplasma_gondii_TI... 28 4.3 Toxoplasma_gondii|V|76.m03423|Tg Annotation|Toxoplasma_gondii_TI... 28 4.3 Toxoplasma_gondii|VIIb|55.m04658|Tg Annotation|Toxoplasma_gondii... 28 5.7 Toxoplasma_gondii|VIII|59.m03361|Tg Annotation|Toxoplasma_gondii... 28 5.7 Toxoplasma_gondii|X|42.m03618|Tg Annotation|Toxoplasma_gondii_TI... 28 5.7 Toxoplasma_gondii|VIIa|20.m03691|Tg Annotation|Toxoplasma_gondii... 27 7.4 Toxoplasma_gondii|XI|583.m05400|Tg Annotation|Toxoplasma_gondii_... 27 7.4 Toxoplasma_gondii|IX|541.m01215|Tg Annotation|Toxoplasma_gondii_... 27 9.7 Toxoplasma_gondii|XI|583.m05375|Tg Annotation|Toxoplasma_gondii_... 27 9.7 Toxoplasma_gondii|XI|583.m05712|Tg Annotation|Toxoplasma_gondii_... 27 9.7 Toxoplasma_gondii|IV|162.m00318|Tg Annotation|Toxoplasma_gondii_... 27 9.7 Toxoplasma_gondii|IV|641.m01518|Tg Annotation|Toxoplasma_gondii_... 27 9.7 Toxoplasma_gondii|VIIa|74.m00427|Tg Annotation|Toxoplasma_gondii... 23 9.9 >Toxoplasma_gondii|VIII|44.m00005|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) peroxisomal catalase Length = 502 Score = 373 bits (957), Expect = e-104 Identities = 188/327 (57%), Positives = 230/327 (70%), Gaps = 4/327 (1%) Frame = +1 Query: 1 YTEEGNWDLVGNNTPIFFLRDPILFPSFIHTQKRNPATHLKDADMFWDFISLRPETTHQV 180 YTEEGNWD+VGNNTPIFF+RD I FP FIHTQKR+P THL D +M WDF SL PE+ HQV Sbjct: 126 YTEEGNWDMVGNNTPIFFVRDAIKFPDFIHTQKRHPQTHLHDPNMVWDFFSLVPESVHQV 185 Query: 181 SFLFSDRGIPDGYRHLNGYGSHTFENVNAQGVVSYVKYHFKTDQGIRNLPVDVADKLAGT 360 +FL++DRG PDG+RH+NGYGSHTF+ +N YVK+HFKT+QGI+NL A +L Sbjct: 186 TFLYTDRGTPDGFRHMNGYGSHTFKFINKDNEAFYVKWHFKTNQGIKNLNRQRAKELESE 245 Query: 361 NPDYAIQDLYEAIARKEYPTWTLYIQVMTQAQAEQHLAQGFNPFDVTKVWSHKTYPLKEV 540 +PDYA++DL+ AIA++E+P+WT IQVM AE + +N FDVTKVW H YPL V Sbjct: 246 DPDYAVRDLFNAIAKREFPSWTFCIQVMPLKDAETY---KWNVFDVTKVWPHGDYPLIPV 302 Query: 541 GKLVLNRNPANYFSDVEQLAFSPAHFVPGIQPSPDKMLQGRLFSYSDTHRHRLGPNYQQI 720 G+LVL+RNP NYF DVEQ AF+PAH VPGI+PS D+MLQGR+FSY DTHRHRLG NY QI Sbjct: 303 GRLVLDRNPENYFQDVEQAAFAPAHMVPGIEPSEDRMLQGRMFSYIDTHRHRLGANYHQI 362 Query: 721 PVNQPVQSQPKNYQ-RDGFMTVNGNQGGAPNYFPNSFNG---PDYLAHVPDPAKQVSQTV 888 PVN+P ++ +Y RDG M V+GN+G NY PNS +G D A V VS TV Sbjct: 363 PVNRPWNARGGDYSVRDGPMCVDGNKGSQLNYEPNSVDGFPKEDRNAAV-SGTTTVSGTV 421 Query: 889 IPSLSSKDENNFTQAGQILPNVLTGEE 969 ++F Q G VL+ E Sbjct: 422 ACHPQEHPNSDFEQPGNFYRTVLSEPE 448 >Toxoplasma_gondii|VIIa|20.m05984|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 1245 Score = 33.1 bits (74), Expect = 0.14 Identities = 23/69 (33%), Positives = 32/69 (46%) Frame = +3 Query: 534 GSRQARPQPQSRELLQRRGAIGVLPCALCSWHPTFA*QDASRPSLLLLGHASPPSRPELP 713 GS+ A+P P S L + +PCA SW P+FA + RP L + P P Sbjct: 144 GSQAAKPSPSSDPLFPSLSSPSYVPCA-SSWMPSFAVR--PRPEFSPLPGMNSSVLPTSP 200 Query: 714 TDPSESTSA 740 P S+S+ Sbjct: 201 LPPPVSSSS 209 >Toxoplasma_gondii|VIIa|20.m03896|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) rhoptry protein, putative / protein kinase domain-containing protein Length = 554 Score = 30.8 bits (68), Expect = 0.67 Identities = 14/39 (35%), Positives = 24/39 (61%) Frame = -2 Query: 795 LVAIHGHETITLIVLGLALHWLIHWDLLVVRAETVAMRV 679 +V + G T +V+GL W+ ++ LL++RAET +V Sbjct: 328 VVMLEGQPASTEVVIGLTTRWVPNYFLLMMRAETDMSKV 366 >Toxoplasma_gondii|X|42.m03339|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) ankyrin repeat-containing protein Length = 1217 Score = 30.4 bits (67), Expect = 0.88 Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 4/101 (3%) Frame = +1 Query: 577 FSDVEQLAFSPAHFVPGIQPS-PDKMLQGRL---FSYSDTHRHRLGPNYQQIPVNQPVQS 744 ++ LAF A P +Q P L L SYSD L + Q P + P ++ Sbjct: 233 YASSSALAFGSAAHPPAVQSCLPSAPLADVLESSCSYSDGVVASLSTHENQPPTSPPPET 292 Query: 745 QPKNYQRDGFMTVNGNQGGAPNYFPNSFNGPDYLAHVPDPA 867 P +R G A PNS + P VP P+ Sbjct: 293 APTPRRRSSNPLSAAWTGSASQATPNSLSSPYSWTFVPSPS 333 >Toxoplasma_gondii|XII|50.m03400|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 1731 Score = 30.0 bits (66), Expect = 1.1 Identities = 17/30 (56%), Positives = 20/30 (66%), Gaps = 1/30 (3%) Frame = +3 Query: 654 SRPSLLLLGHASPPSRPE-LPTDPSESTSA 740 SRPS L ASPPSR E LP+ P ++T A Sbjct: 1129 SRPSSLPRAAASPPSRVENLPSHPEKTTEA 1158 >Toxoplasma_gondii|VIIa|20.m03736|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) RNA pseudouridylate synthase domain-containing protein Length = 1739 Score = 29.6 bits (65), Expect = 1.5 Identities = 19/39 (48%), Positives = 21/39 (53%) Frame = +3 Query: 654 SRPSLLLLGHASPPSRPELPTDPSESTSAEPTQELST*W 770 S PSL L HASP S P + PS S SA + LS W Sbjct: 1241 SSPSLSPLPHASPFSPPR--SSPSSSRSAPSSSPLSESW 1277 >Toxoplasma_gondii|XI|583.m00711|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 702 Score = 29.6 bits (65), Expect = 1.5 Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 10/81 (12%) Frame = -2 Query: 273 ALSIHVLERXXXXXXXXXXTIRNAAVREEERHLMRGFRTERDEVPEHVGI---LQVRR-- 109 A+ H ++ +R AA R + L+R R E + PE VG+ +QV++ Sbjct: 352 AMEYHAEDQVNKVKAKAERELRRAAERLKRSELVRAVREEVGDAPEEVGLEQWIQVQQSR 411 Query: 108 -----GVALLRVNEAREENGV 61 +A R EA EE + Sbjct: 412 LGSAASIAKQRAREAFEEENM 432 >Toxoplasma_gondii|V|76.m01552|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) mRNA processing protein, putative Length = 615 Score = 29.3 bits (64), Expect = 1.9 Identities = 19/52 (36%), Positives = 26/52 (50%) Frame = -2 Query: 210 RNAAVREEERHLMRGFRTERDEVPEHVGILQVRRGVALLRVNEAREENGVSE 55 R+ + E + R RTER E +H G+L V V AR+ENG S+ Sbjct: 292 RHMGLPEAQLEKARRNRTERQEQLQHAGLLSV-------PVATARQENGPSQ 336 >Toxoplasma_gondii|XII|37.m00772|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 1566 Score = 28.9 bits (63), Expect = 2.5 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +3 Query: 603 LPCALCSWHPTFA*QDASRPSLLLLGHASPPSRPELPTDPSESTSAEPT 749 LP L W S PSL H SPP P+ S S + P+ Sbjct: 1414 LPSLLARWRQQLIAPKLSLPSLASPSHPSPPPSSASPSSASASPPSPPS 1462 >Toxoplasma_gondii|VIIb|55.m04751|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 744 Score = 26.2 bits (56), Expect(2) = 2.8 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = -2 Query: 705 RAETVAMRVRVGEETALKHLVRRRLDARNKVRRGERQ 595 R E R G E K +R R A K +RGERQ Sbjct: 486 RGEGREQRESKGSEGCTKKFLRSRWSAGRKKQRGERQ 522 Score = 20.8 bits (42), Expect(2) = 2.8 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = -1 Query: 532 STGTSCATTPWSHQTG 485 S+ TS TPWS + G Sbjct: 559 SSETSFCATPWSPERG 574 >Toxoplasma_gondii|X|42.m07385|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 770 Score = 28.1 bits (61), Expect = 4.3 Identities = 37/137 (27%), Positives = 54/137 (39%), Gaps = 23/137 (16%) Frame = +3 Query: 399 RSQGIPNMDAVHPSNDAS---SSRTTLGSRLQPV*CDQGVVAQDVP-------------V 530 R + +P + V PS A+ S TL S +Q + C + +P + Sbjct: 633 RRRELPLVSGVPPSGFAAWPLFSTATLASSVQMIACPASISPGALPWKLHLSTAVFMFVL 692 Query: 531 EGSR--QARPQPQSREL-LQRRGAIGVLPCALCSWHPTFA*QDASRPSLLLLGHASPPSR 701 EGS Q R+ + R A+ V P P +++P LLL+ HA PPS Sbjct: 693 EGSGVLQVTEGETERDFPFETRAALSVPPLT-----PYRVLAASAQPLLLLVCHAPPPSE 747 Query: 702 ----PELPTDPSESTSA 740 P TD +T A Sbjct: 748 DADAPHGATDSQRATEA 764 >Toxoplasma_gondii|X|42.m03599|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 1136 Score = 28.1 bits (61), Expect = 4.3 Identities = 32/105 (30%), Positives = 42/105 (40%), Gaps = 3/105 (2%) Frame = +3 Query: 435 PSNDASSSRTTLGSRLQPV*CDQGVVAQDVPVEGSRQARPQPQ---SRELLQRRGAIGVL 605 P + AS S + S + C +G +D +E S P R+ RR L Sbjct: 5 PYSSASCSSFSFSSSAS-LDCARGSEGKDSSLEISSSLNEGPDLWSCRQDSSRR----TL 59 Query: 606 PCALCSWHPTFA*QDASRPSLLLLGHASPPSRPELPTDPSESTSA 740 P S TFA AS PS L +SP S + PS S S+ Sbjct: 60 PFVFASTSHTFAVSGASSPSSSSLSCSSPSSSLSSSSFPSSSLSS 104 >Toxoplasma_gondii|V|76.m03423|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 369 Score = 28.1 bits (61), Expect = 4.3 Identities = 17/65 (26%), Positives = 30/65 (46%) Frame = +1 Query: 790 NQGGAPNYFPNSFNGPDYLAHVPDPAKQVSQTVIPSLSSKDENNFTQAGQILPNVLTGEE 969 NQ GA +S GP ++ VP + + T + + + E+ + +GQ +P TG + Sbjct: 152 NQAGASGALHSS--GPRFVERVPSTLQSCTATESGAQTGRGESLYCSSGQRMPMDRTGTQ 209 Query: 970 THSFG 984 G Sbjct: 210 QRMTG 214 >Toxoplasma_gondii|VIIb|55.m04658|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) DEAD/DEAH box helicase, putative Length = 1370 Score = 27.7 bits (60), Expect = 5.7 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 12/81 (14%) Frame = +1 Query: 604 SPAHFVPGIQPS-----PDKMLQGRLFSYSD-----THRHRLG--PNYQQIPVNQPVQSQ 747 S A F P + PS PD GRL D +H + P Q+ PV+Q +++ Sbjct: 848 SVAFFSPSVSPSSTCLRPDSTPSGRLHGSRDASPQSSHANAWAARPPPQEAPVSQSSRNE 907 Query: 748 PKNYQRDGFMTVNGNQGGAPN 810 + QRD V+G+ P+ Sbjct: 908 SWSGQRDQRRDVSGDTTVCPD 928 >Toxoplasma_gondii|VIII|59.m03361|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) 200 kDa antigen p200-related Length = 2885 Score = 27.7 bits (60), Expect = 5.7 Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 7/51 (13%) Frame = -1 Query: 193 RRGTTLDAWFQDGER*----SPRTCRHPSSASRGCAFACE*S---SGREWG 62 R+ + + W DGER P T + SS RGC AC + S EWG Sbjct: 387 RQKSESENWETDGERELEDMRPFTASNDSSRLRGCLRACSPADPLSAGEWG 437 >Toxoplasma_gondii|X|42.m03618|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) conserved hypothetical protein Length = 618 Score = 27.7 bits (60), Expect = 5.7 Identities = 14/29 (48%), Positives = 17/29 (58%) Frame = +3 Query: 660 PSLLLLGHASPPSRPELPTDPSESTSAEP 746 PSL L+ +S P LP+ PS S SA P Sbjct: 118 PSLSLVSSSSSRPPPSLPSSPSSSFSAFP 146 >Toxoplasma_gondii|VIIa|20.m03691|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 4914 Score = 27.3 bits (59), Expect = 7.4 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 707 FGPRRWRCVSE*EKRRP*SILSGEGWMPGTKCAGENANCST 585 F RR + E RP LSG+G +PG++ GE ++ T Sbjct: 1652 FRGRRGGLQAAGETTRPLLCLSGDGSLPGSRMLGERSDDGT 1692 >Toxoplasma_gondii|XI|583.m05400|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 3182 Score = 27.3 bits (59), Expect = 7.4 Identities = 21/60 (35%), Positives = 27/60 (45%) Frame = +3 Query: 249 VRERECSRRGVVRQVPFQDRPRHSQLARGCC*QIGRHQPRLRDPGLVRSHRSQGIPNMDA 428 V ER S +V + F+ PR QLA + GR PR+ R HR Q P + A Sbjct: 2813 VDERRISNLKMVDPLEFKPPPRKKQLADTDWAKYGRPAPRIG-----REHREQLRPQVTA 2867 >Toxoplasma_gondii|IX|541.m01215|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) DEAD/DEAH box helicase, putative Length = 1626 Score = 26.9 bits (58), Expect = 9.7 Identities = 12/25 (48%), Positives = 18/25 (72%), Gaps = 1/25 (4%) Frame = +3 Query: 252 REREC-SRRGVVRQVPFQDRPRHSQ 323 R++ C + RG VRQ P QD+ RH++ Sbjct: 1125 RKQLCDAARGAVRQQPLQDKMRHNE 1149 >Toxoplasma_gondii|XI|583.m05375|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 555 Score = 26.9 bits (58), Expect = 9.7 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Frame = -2 Query: 648 LVRRRLDARNKVRRGERQLLHVAEVV-RGIAVEDELADFLQRVRLVRPHLGHIKRVEALS 472 L+ RR A N + + HVAE V +G+ E +FLQ+ + +L + V LS Sbjct: 23 LLCRRQVADNWAQLLKAAHAHVAEAVTQGVGDEQVAQEFLQKNKDELHYLKIKELVSILS 82 Query: 471 QVLFGLSLRHYLDVQRPCWVFLASDGFVQVLDRVV 367 Q H LD+ R W+ + + VL R + Sbjct: 83 QRAMEKGNLHILDMSR--WLSRHLNDNIPVLQRSI 115 >Toxoplasma_gondii|XI|583.m05712|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) EF hand domain-containing protein Length = 5953 Score = 26.9 bits (58), Expect = 9.7 Identities = 21/88 (23%), Positives = 39/88 (44%), Gaps = 1/88 (1%) Frame = -2 Query: 789 AIHGHETITLIVLGLALHWLIHWDLLVVRAETVAMRVRVGEETALKHLVRRRLDARNKVR 610 + H H + +++ + WL WD V AE VR E + + R + R +V Sbjct: 5394 SFHSHRRLKNVII--VMEWLPDWDCGVAGAEGSRGEVRDDCEESRERREREESERRRRV- 5450 Query: 609 RGERQLLHVAEV-VRGIAVEDELADFLQ 529 +++ + + RG+ E L +FL+ Sbjct: 5451 ---QEIFDLLDTRRRGVIEERALPEFLR 5475 >Toxoplasma_gondii|IV|162.m00318|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) protein kinase domain-containing protein Length = 2954 Score = 26.9 bits (58), Expect = 9.7 Identities = 21/73 (28%), Positives = 32/73 (43%) Frame = +3 Query: 369 LRDPGLVRSHRSQGIPNMDAVHPSNDASSSRTTLGSRLQPV*CDQGVVAQDVPVEGSRQA 548 LR P V ++ S + + S+ +SSS ++ + P A P GSR+ Sbjct: 2591 LRTPDKVAANSSSSSSSSSSSSSSSSSSSSSSSSSASSSPSSPSSAASASLSPTGGSRRR 2650 Query: 549 RPQPQSRELLQRR 587 PQ RE +RR Sbjct: 2651 AASPQ-REREERR 2662 >Toxoplasma_gondii|IV|641.m01518|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) hypothetical protein Length = 1344 Score = 26.9 bits (58), Expect = 9.7 Identities = 13/45 (28%), Positives = 22/45 (48%) Frame = +1 Query: 817 PNSFNGPDYLAHVPDPAKQVSQTVIPSLSSKDENNFTQAGQILPN 951 P+ P+ A P P+ S+ PS+SS +N + +I P+ Sbjct: 194 PSVSQAPEASAEAPSPSMPPSRLSSPSVSSASQNTAAKRRRIQPS 238 >Toxoplasma_gondii|VIIa|74.m00427|Tg Annotation|Toxoplasma_gondii_TIGR|(protein coding) ATP synthase-related Length = 3745 Score = 22.7 bits (47), Expect(2) = 9.9 Identities = 18/56 (32%), Positives = 22/56 (39%) Frame = -2 Query: 333 HGQVANALVGLEMVLDVRHHALSIHVLERXXXXXXXXXXTIRNAAVREEERHLMRG 166 HG A A VG + L AL + VLE I N R E L++G Sbjct: 3229 HGDAAEAAVGAPVALKFFVDALRLSVLEGAENALSNMIAEIVNK--RGEMHILLKG 3282 Score = 21.9 bits (45), Expect(2) = 9.9 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = -3 Query: 137 NMSASFKCVAGL 102 N++ SFKC+ GL Sbjct: 3303 NLTKSFKCIGGL 3314 Database: /home/amadoui/banque/toxo_gondii Posted date: Mar 30, 2007 3:41 PM Number of letters in database: 5,605,631 Number of sequences in database: 7793 Lambda K H 0.318 0.136 0.420 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,697,342 Number of Sequences: 7793 Number of extensions: 300407 Number of successful extensions: 1215 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1006 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1209 length of database: 5,605,631 effective HSP length: 95 effective length of database: 4,865,296 effective search space used: 1128748672 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)