BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig1815 NX0AMYA13YF12CM1.SCF NX0AMYA13YJ03CM1.SCF (890 letters) Database: /home/amadoui/banque/thalassiora 11,390 sequences; 5,670,313 total letters Searching.......................done Score E Sequences producing significant alignments: (bits) Value jgi|Thaps3|264688|thaps1_ua_kg.chr_20000029 139 1e-33 jgi|Thaps3|261627|thaps1_ua_kg.chr_3000005 104 4e-23 jgi|Thaps3|35314|e_gw1.7.452.1 82 3e-16 jgi|Thaps3|263906|thaps1_ua_kg.chr_12000057 44 5e-05 jgi|Thaps3|4596|fgenesh1_pg.C_chr_4000546 33 0.11 jgi|Thaps3|869|fgenesh1_pg.C_chr_1000003 31 0.42 jgi|Thaps3|24325|estExt_fgenesh1_pg.C_chr_11a0113 31 0.55 jgi|Thaps3|21581|estExt_fgenesh1_pg.C_chr_21016 30 1.2 jgi|Thaps3|22658|estExt_fgenesh1_pg.C_chr_50295 30 1.2 jgi|Thaps3|10337|fgenesh1_pg.C_chr_16a000018 30 1.2 jgi|Thaps3|11208|fgenesh1_pg.C_chr_19a_19000151 29 1.6 jgi|Thaps3|12075|fgenesh1_pg.C_chr_23000103 29 1.6 jgi|Thaps3|2075|fgenesh1_pg.C_chr_2000030 28 2.7 jgi|Thaps3|9425|fgenesh1_pg.C_chr_13000145 28 3.6 jgi|Thaps3|6511|fgenesh1_pg.C_chr_6000666 28 3.6 jgi|Thaps3|24335|estExt_fgenesh1_pg.C_chr_11a0137 28 3.6 jgi|Thaps3|23894|estExt_fgenesh1_pg.C_chr_80493 28 3.6 jgi|Thaps3|6547|fgenesh1_pg.C_chr_6000702 28 4.7 jgi|Thaps3|23888|estExt_fgenesh1_pg.C_chr_80475 28 4.7 jgi|Thaps3|23988|estExt_fgenesh1_pg.C_chr_90200 28 4.7 jgi|Thaps3|22727|estExt_fgenesh1_pg.C_chr_50453 27 6.1 jgi|Thaps3|6656|fgenesh1_pg.C_chr_7000039 27 6.1 jgi|Thaps3|21589|estExt_fgenesh1_pg.C_chr_30017 27 8.0 jgi|Thaps3|993|fgenesh1_pg.C_chr_1000127 27 8.0 jgi|Thaps3|991|fgenesh1_pg.C_chr_1000125 27 8.0 jgi|Thaps3|24466|estExt_fgenesh1_pg.C_chr_120134 27 8.0 jgi|Thaps3|24445|estExt_fgenesh1_pg.C_chr_120085 27 8.0 >jgi|Thaps3|264688|thaps1_ua_kg.chr_20000029 Length = 162 Score = 139 bits (350), Expect = 1e-33 Identities = 75/142 (52%), Positives = 97/142 (68%), Gaps = 4/142 (2%) Frame = +1 Query: 169 YRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIME 348 ++G V VVNVAS+*GLT++NY Q + L +Y ++G +ILAFPCNQFG QEPGT +I+E Sbjct: 21 FKGDVLCVVNVASK*GLTKVNYVQFSKLYDEYNSRGFKILAFPCNQFGAQEPGTPAEILE 80 Query: 349 FV-KTFGI--TFQFFNKCDVNGDNTVPVFQYLKHHLSGLLG-NFIKWNFTKFLVDREGQP 516 FV K F F +F K VNG +T V+ +LK L G + I+WNF KF+VD EG P Sbjct: 81 FVEKNFQAKDKFTWFEKGHVNGKDTREVYSFLKAKLPSEDGTSDIRWNFAKFMVDHEGNP 140 Query: 517 FKRYSPQTAPNDFEGDIVELLS 582 FKRY P+T P D + DI ELL+ Sbjct: 141 FKRYGPKTNPEDMKSDIEELLA 162 >jgi|Thaps3|261627|thaps1_ua_kg.chr_3000005 Length = 151 Score = 104 bits (259), Expect = 4e-23 Identities = 61/141 (43%), Positives = 85/141 (60%), Gaps = 2/141 (1%) Frame = +1 Query: 163 VQYRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKI 342 ++Y G + L+VNVA +*GLT+ NY +LA L KY +GL +LAFP N F QE TNE+I Sbjct: 18 MKYAGSISLIVNVACE*GLTKSNYKELAVLYDKYHKRGLNVLAFPSNDF-HQEKETNEEI 76 Query: 343 MEFVKTF--GITFQFFNKCDVNGDNTVPVFQYLKHHLSGLLGNFIKWNFTKFLVDREGQP 516 +E+V++ + F F++ + + VFQ + H G + WNF K+LVD EG+ Sbjct: 77 LEYVRSNFPEVRFPVFSRAPLASN---LVFQLCEKH----TGESVAWNFHKYLVDGEGRA 129 Query: 517 FKRYSPQTAPNDFEGDIVELL 579 K Y + P D EGDIV LL Sbjct: 130 VKSYGHRVQPIDMEGDIVRLL 150 >jgi|Thaps3|35314|e_gw1.7.452.1 Length = 153 Score = 81.6 bits (200), Expect = 3e-16 Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 4/119 (3%) Frame = +1 Query: 166 QYRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQG--LEILAFPCNQFGGQEPGTNEK 339 Q++G+V +V NVAS G T+ +Y L L KY++ L ILAFPCNQFG QEP T Sbjct: 30 QFKGQVTVVANVASYCGYTESHYKGLTKLHRKYKSSPTKLNILAFPCNQFGEQEPETCST 89 Query: 340 IMEFVKT-FGITFQFFNKCDVNGDNTVPVFQYLKHHLSGLLGNFIKWNF-TKFLVDREG 510 I F T +G+ F NK DVNG + V+ +LK ++G I WNF T F+V +G Sbjct: 90 IKRFATTKYGVEFTMMNKVDVNGLDASDVYLWLK-KVAG--PPRITWNFGTYFVVTPDG 145 >jgi|Thaps3|263906|thaps1_ua_kg.chr_12000057 Length = 106 Score = 44.3 bits (103), Expect = 5e-05 Identities = 29/89 (32%), Positives = 42/89 (47%) Frame = +1 Query: 169 YRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIME 348 + G V ++VN A +++ Y L + + Y LEILAFP N + I Sbjct: 19 FEGYVTVIVNAARVCDYSEVFYGTLEHMHSVYP-YALEILAFPFNHPNVTIDKCEDAIKS 77 Query: 349 FVKTFGITFQFFNKCDVNGDNTVPVFQYL 435 K+ G D+NGD+T PVF+YL Sbjct: 78 AEKSGGTKVHIMEAIDINGDSTHPVFKYL 106 >jgi|Thaps3|4596|fgenesh1_pg.C_chr_4000546 Length = 1012 Score = 33.1 bits (74), Expect = 0.11 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Frame = +3 Query: 408 QHGASVSVPEAPPLGTPGQLYQVELYQVPRRSRGPTVQAIQSPDRPQRL---RRRHCRAL 578 Q S SV EA + PG E ++S+ PT +AI D + ++ RAL Sbjct: 630 QGAPSASVGEAVAIPLPGSFADDEASVRSKKSKSPTAEAISLEDDEATVVETQKEPLRAL 689 Query: 579 VQTSAQGRIQGGSQARIA*NDVE 647 ++ +A+ +GG ND+E Sbjct: 690 LEKAAENAGRGGLDVTEFLNDLE 712 >jgi|Thaps3|869|fgenesh1_pg.C_chr_1000003 Length = 1105 Score = 31.2 bits (69), Expect = 0.42 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 533 PRPPPTTSKATLS-SSCPNKRPGKNPRRKPSKN 628 P PPTTS T++ SS P K P +P P++N Sbjct: 306 PTSPPTTSDPTVNPSSSPTKNPTLSPSSSPAQN 338 Score = 30.4 bits (67), Expect = 0.72 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Frame = +2 Query: 527 TVPRPPPTTSKATLSSSCP--NKRPGKNPRRKPSKN 628 T P PPTTS T++ + P P NP P+KN Sbjct: 291 TAPTSPPTTSDPTVAPTSPPTTSDPTVNPSSSPTKN 326 >jgi|Thaps3|24325|estExt_fgenesh1_pg.C_chr_11a0113 Length = 1846 Score = 30.8 bits (68), Expect = 0.55 Identities = 29/112 (25%), Positives = 41/112 (36%) Frame = +2 Query: 290 HSLAISLEVKNRARTKRSWNLSRRLASRFNSSTSVMSMATTRCQCFST*STTSRDSWAXX 469 H+ +IS + N S +S + + S SV SM T+ + S+ DS Sbjct: 389 HAPSISTQPSNAPSDSPS--VSSKPTGAPSESPSVSSMPTSEPSLSPSESSAPSDS---- 442 Query: 470 XXXXXXXXXXXXXXXXXXDTVPRPPPTTSKATLSSSCPNKRPGKNPRRKPSK 625 T P PT S +T ++ P P KNP PSK Sbjct: 443 -----PTSTPTTSPTSKPTTSPTDEPTKSPSTSPTANPTASPSKNPTSSPSK 489 Score = 29.6 bits (65), Expect = 1.2 Identities = 14/34 (41%), Positives = 16/34 (47%) Frame = +2 Query: 527 TVPRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 T P PTTS + P+ P NP PSKN Sbjct: 449 TSPTSKPTTSPTDEPTKSPSTSPTANPTASPSKN 482 >jgi|Thaps3|21581|estExt_fgenesh1_pg.C_chr_21016 Length = 4505 Score = 29.6 bits (65), Expect = 1.2 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +2 Query: 536 RPPPTTSKATLSSSCPNKRPGKNPRRKPSKNSLK*CRAL 652 +P TS T ++ P+KRP NP PS + L C ++ Sbjct: 1621 KPVAQTSHPTNATQQPSKRPSLNPAAIPSNSPLSPCSSV 1659 >jgi|Thaps3|22658|estExt_fgenesh1_pg.C_chr_50295 Length = 2183 Score = 29.6 bits (65), Expect = 1.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSK 625 P PT + SS P+K+P K P PSK Sbjct: 189 PTANPTKQPSKTPSSSPSKQPSKTPSSSPSK 219 >jgi|Thaps3|10337|fgenesh1_pg.C_chr_16a000018 Length = 818 Score = 29.6 bits (65), Expect = 1.2 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%) Frame = +2 Query: 533 PRPPPTTSK----ATLSSSCPNKRPGKNPRRKPSKNSLK*CRALSSWN 664 P PPP T K A SSS P++RP K P N + AL W+ Sbjct: 671 PPPPPPTYKRSGSAASSSSEPSRRPSKTQTPSPPTNLQE---ALQQWS 715 >jgi|Thaps3|11208|fgenesh1_pg.C_chr_19a_19000151 Length = 796 Score = 29.3 bits (64), Expect = 1.6 Identities = 16/63 (25%), Positives = 23/63 (36%) Frame = +2 Query: 437 STTSRDSWAXXXXXXXXXXXXXXXXXXXXDTVPRPPPTTSKATLSSSCPNKRPGKNPRRK 616 STT S + VP PT++ T SS P+ P +P ++ Sbjct: 53 STTLEPSTSPSFQDTSTATPSSDVASSTPSFVPSNAPTSTSTTNSSRTPSHAPSSHPTKR 112 Query: 617 PSK 625 P K Sbjct: 113 PIK 115 >jgi|Thaps3|12075|fgenesh1_pg.C_chr_23000103 Length = 846 Score = 29.3 bits (64), Expect = 1.6 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPS 622 P PT+S + S+ P+K P +P +KPS Sbjct: 762 PSDSPTSSPSKSPSASPSKTPSASPSKKPS 791 Score = 28.1 bits (61), Expect = 3.6 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +2 Query: 533 PRPPPTTSKATLS-SSCPNKRPGKNPRRKPSKNS 631 P PP+ TLS +S P+K+P K P P N+ Sbjct: 706 PSSPPSAHPITLSPTSPPSKQPSKQPVTSPPTNN 739 >jgi|Thaps3|2075|fgenesh1_pg.C_chr_2000030 Length = 449 Score = 28.5 bits (62), Expect = 2.7 Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 8/95 (8%) Frame = +2 Query: 161 KYSTVAASVLL*TSRRSEA*RNSTTLNSPLL--MRNTAIKAWKS*HSLAISLEVKNRA-- 328 K S AS T+ S + NS+T+ P + R I A S +S + S V + Sbjct: 89 KRSAATASTASATTPFSSSGLNSSTIRQPPISQQRTNIIPAANSSYSSSSSSSVLSSTLQ 148 Query: 329 ----RTKRSWNLSRRLASRFNSSTSVMSMATTRCQ 421 R + SW R S N+++ ATTR Q Sbjct: 149 SFSLRLENSWRKQRYSGSNNNNNSRETDKATTRKQ 183 >jgi|Thaps3|9425|fgenesh1_pg.C_chr_13000145 Length = 884 Score = 28.1 bits (61), Expect = 3.6 Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 6/75 (8%) Frame = +2 Query: 65 ASSQSSGDDPTKAKSFFELSAVDM------AGQTVPMSKYSTVAASVLL*TSRRSEA*RN 226 AS S D P K FF++ + A S ST AA+V T+R R Sbjct: 16 ASLSSREDAPPKESKFFQIGKGNSYNKPKTAAAAKSASSSSTSAAAVTSSTTRAPLPKRF 75 Query: 227 STTLNSPLLMRNTAI 271 STT +P NT++ Sbjct: 76 STTRKAPSYRINTSV 90 >jgi|Thaps3|6511|fgenesh1_pg.C_chr_6000666 Length = 1241 Score = 28.1 bits (61), Expect = 3.6 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPS 622 P PPP + T+ + P+K+P K P PS Sbjct: 1038 PPPPPPPTTPTVVTPSPSKQPTKQPVVTPS 1067 >jgi|Thaps3|24335|estExt_fgenesh1_pg.C_chr_11a0137 Length = 1549 Score = 28.1 bits (61), Expect = 3.6 Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 10/73 (13%) Frame = -2 Query: 322 VLDLQTDCKGMLGFPSLDCGISHQERRVECS*VASSLTAT----------RRSQQDRRGH 173 V+ L T + M FPSLDC I+ S + AT ++ + R G Sbjct: 891 VVGLDTLAEEMGLFPSLDCSINSDATNATASGIRQRQVATMGSFITPGFLKQQAEQRTGD 950 Query: 172 GTVLAHRYGLASH 134 +L+ RY H Sbjct: 951 AAMLSERYDKYFH 963 >jgi|Thaps3|23894|estExt_fgenesh1_pg.C_chr_80493 Length = 1524 Score = 28.1 bits (61), Expect = 3.6 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 P P+ S +++ S+ P+ P NP +PS N Sbjct: 49 PSSNPSESPSSIPSTQPSSDPSSNPSEQPSSN 80 Score = 27.3 bits (59), Expect = 6.1 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = +2 Query: 530 VPRPPPTTSKATLSSSCPNKRPGK----NPRRKPSKN 628 VP P+ ++L SS P+++P NP KPS N Sbjct: 324 VPSSGPSEQPSSLPSSGPSEQPSSIPSSNPSEKPSSN 360 Score = 27.3 bits (59), Expect = 6.1 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPS 622 P P++ ++ SS P+K P +P R PS Sbjct: 137 PSEKPSSIPSSSPSSIPSKEPSSDPSRSPS 166 Score = 26.9 bits (58), Expect = 8.0 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = +2 Query: 527 TVPRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 T P P+T+ + SS P+ +P P PS++ Sbjct: 663 TQPSSEPSTNPSESPSSIPSSQPSSEPSSNPSES 696 Score = 26.9 bits (58), Expect = 8.0 Identities = 10/30 (33%), Positives = 16/30 (53%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPS 622 P P+ +++ S+ P+ RP NP PS Sbjct: 377 PSSNPSEQPSSIPSTSPSSRPSTNPSESPS 406 Score = 26.9 bits (58), Expect = 8.0 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +2 Query: 527 TVPRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 ++P P+ +++ SS P+ P K P PS++ Sbjct: 131 SIPSSNPSEKPSSIPSSSPSSIPSKEPSSDPSRS 164 >jgi|Thaps3|6547|fgenesh1_pg.C_chr_6000702 Length = 682 Score = 27.7 bits (60), Expect = 4.7 Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCP--NKRPGKNPRRKPSKN 628 PRPPP+ + +++++ P + P K P +P N Sbjct: 583 PRPPPSNNTTSVTTTQPTVSTSPPKKPNNRPKPN 616 >jgi|Thaps3|23888|estExt_fgenesh1_pg.C_chr_80475 Length = 909 Score = 27.7 bits (60), Expect = 4.7 Identities = 11/33 (33%), Positives = 19/33 (57%) Frame = +2 Query: 530 VPRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 VP P+++ + SS P+K+P P PS++ Sbjct: 122 VPSSEPSSNPSESPSSIPSKQPSSEPSSNPSES 154 >jgi|Thaps3|23988|estExt_fgenesh1_pg.C_chr_90200 Length = 3045 Score = 27.7 bits (60), Expect = 4.7 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPS 622 P PTT+ + + S+ P+ P +NP PS Sbjct: 2533 PTGSPTTAPSRIPSTSPSVSPSENPSTSPS 2562 >jgi|Thaps3|22727|estExt_fgenesh1_pg.C_chr_50453 Length = 1301 Score = 27.3 bits (59), Expect = 6.1 Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = -3 Query: 579 QELDNVAFEVVGGGLGTVS---LERLALAIDEELGKVPLD-KVAQESREVVLQVLKH 421 +E+D +A E G G+VS + +L LA DEE G PL + + L +LKH Sbjct: 95 KEVDKIAAEKSKGKGGSVSSQHVHKLMLAKDEENGYTPLHYAILRRDLLSTLLLLKH 151 >jgi|Thaps3|6656|fgenesh1_pg.C_chr_7000039 Length = 1432 Score = 27.3 bits (59), Expect = 6.1 Identities = 18/55 (32%), Positives = 29/55 (52%) Frame = +1 Query: 574 LLSKQAPREESKEEAKQE*LEMMSSVI*LESRIVHMNDRLLFKPRGQKSLENAVL 738 LL++Q SK +AK + + S + LE R M+D L P+G K ++ V+ Sbjct: 798 LLARQFEGRHSKAQAKNVTKQRVESHVDLELRASVMHDILDMMPQGVKQNKSRVI 852 >jgi|Thaps3|21589|estExt_fgenesh1_pg.C_chr_30017 Length = 1435 Score = 26.9 bits (58), Expect = 8.0 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSK 625 P PTT K + S P+K+P +P +KP++ Sbjct: 1114 PSASPTTGKPSAS---PSKQPSTSPSKKPTQ 1141 >jgi|Thaps3|993|fgenesh1_pg.C_chr_1000127 Length = 1724 Score = 26.9 bits (58), Expect = 8.0 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 574 LLSKQAPREESKEEAKQE*LEMMSSVI*LESRIVHMNDRLLFKPRGQKSLENAVL 738 LL++Q SK +AK + + S LE R M+D L P+G K ++ V+ Sbjct: 1060 LLARQFEGRHSKAQAKNVTKQRVESYFDLELRASVMHDILDMMPQGVKQNKSRVI 1114 >jgi|Thaps3|991|fgenesh1_pg.C_chr_1000125 Length = 1724 Score = 26.9 bits (58), Expect = 8.0 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = +1 Query: 574 LLSKQAPREESKEEAKQE*LEMMSSVI*LESRIVHMNDRLLFKPRGQKSLENAVL 738 LL++Q SK +AK + + S LE R M+D L P+G K ++ V+ Sbjct: 1060 LLARQFEGRHSKAQAKNVTKQRVESYFDLELRASVMHDILDMMPQGVKQNKSRVI 1114 >jgi|Thaps3|24466|estExt_fgenesh1_pg.C_chr_120134 Length = 357 Score = 26.9 bits (58), Expect = 8.0 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSKNS 631 P P P SKA SS P+ P NP +PS +S Sbjct: 190 PAPSPGCSKAGKSSQSPSV-PSGNPSNQPSLSS 221 >jgi|Thaps3|24445|estExt_fgenesh1_pg.C_chr_120085 Length = 2409 Score = 26.9 bits (58), Expect = 8.0 Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 8/77 (10%) Frame = -3 Query: 882 FFXXVMMAHERHTVKNEQYVLSLS*LE------PHKATAQLA-RLKPTQKVSLAV-QDCI 727 FF + ++ R T ++ +++LS +E P+ TA + RL+ T+K+ A+ C+ Sbjct: 718 FFRGLELSEPRTTYRS---LVALSFMEGVLREAPNPQTAVSSQRLRSTEKILPAIIPSCV 774 Query: 726 LKTLLTSRLEEESVIHV 676 KTLL ++ +SV+ V Sbjct: 775 TKTLLGKIVQSQSVLLV 791 Database: /home/amadoui/banque/thalassiora Posted date: Mar 30, 2007 3:43 PM Number of letters in database: 5,670,313 Number of sequences in database: 11,390 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,120,967 Number of Sequences: 11390 Number of extensions: 192584 Number of successful extensions: 923 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 714 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 898 length of database: 5,670,313 effective HSP length: 94 effective length of database: 4,599,653 effective search space used: 929129906 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)