BLASTX 2.2.9 [May-01-2004]
BLASTX 2.2.9 [May-01-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= NX0AMYA7YO07CM1.SCF (idq=205910)
         (804 letters)

Database: /home/amadoui/banque/plasm_falciparum 
           5411 sequences; 4,065,673 total letters

Searching...........done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Plasmodium_falciparum_3D7|MAL13|PF13_0298|Pf Annotation|Plasmodi...    28   2.4  
Plasmodium_falciparum_3D7|MAL7|PF07_0086|Pf Annotation|Plasmodiu...    27   5.4  

>Plasmodium_falciparum_3D7|MAL13|PF13_0298|Pf
           Annotation|Plasmodium_falciparum_Sanger|(protein coding)
           hypothetical protein
          Length = 1398

 Score = 28.1 bits (61), Expect = 2.4
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 380 QVSVGNVGVLCLDSFEFFNHNDQTMVATVIDFRV 279
           Q  + N   LCL+    F  N++T ++  IDF++
Sbjct: 483 QEYINNYSKLCLEDKSLFYTNNETKISFTIDFKI 516


>Plasmodium_falciparum_3D7|MAL7|PF07_0086|Pf
            Annotation|Plasmodium_falciparum_Sanger|(protein coding)
            hypothetical protein
          Length = 3429

 Score = 26.9 bits (58), Expect = 5.4
 Identities = 14/54 (25%), Positives = 25/54 (46%)
 Frame = +3

Query: 366  TYADLYVYAGVVAISEMGGPEVPFHLGRKDAKSGKESTPDDRLPDADKGSKPKT 527
            TY DL+++   +  S+ G   +  H G    +  K  T +    + D+G K +T
Sbjct: 1341 TYYDLFLFFCTLLTSKGGDEIIKGHKGIIPTQGDKNETDEGNKNETDEGDKNET 1394


  Database: /home/amadoui/banque/plasm_falciparum
    Posted date:  Mar 30, 2007  3:37 PM
  Number of letters in database: 4,065,673
  Number of sequences in database:  5411
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,054,301
Number of Sequences: 5411
Number of extensions: 98524
Number of successful extensions: 254
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 254
length of database: 4,065,673
effective HSP length: 91
effective length of database: 3,573,272
effective search space used: 628895872
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)