BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig2455 NX0AMYA23YA08CM1.SCF NX0AMYA26YE07CM1.SCF NX0AMYA26YB12CM1.SCF (933 letters) Database: /home/amadoui/banque/plasm_falciparum 5411 sequences; 4,065,673 total letters Searching...........done Score E Sequences producing significant alignments: (bits) Value Plasmodium_falciparum_3D7|MAL14|PF14_0368|Pf Annotation|Plasmodi... 161 2e-40 Plasmodium_falciparum_3D7|MAL12|PFL0725w|Pf Annotation|Plasmodiu... 139 9e-34 Plasmodium_falciparum_3D7|MAL8|PF08_0131|Pf Annotation|Plasmodiu... 84 4e-17 Plasmodium_falciparum_3D7|MAL10|PF10_0268|Pf Annotation|Plasmodi... 33 0.12 Plasmodium_falciparum_3D7|MAL10|PF10_0045|Pf Annotation|Plasmodi... 29 1.8 Plasmodium_falciparum_3D7|MAL11|PF11_0129|Pf Annotation|Plasmodi... 27 5.1 Plasmodium_falciparum_3D7|MAL4|PFD0545w|Pf Annotation|Plasmodium... 27 6.7 Plasmodium_falciparum_3D7|MAL13|MAL13P1.342|Pf Annotation|Plasmo... 27 8.7 >Plasmodium_falciparum_3D7|MAL14|PF14_0368|Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) 2-Cys peroxiredoxin Length = 195 Score = 161 bits (407), Expect = 2e-40 Identities = 78/177 (44%), Positives = 119/177 (67%), Gaps = 3/177 (1%) Frame = +2 Query: 278 AFIGKPAPAFTAPAVVRGD-IDEISLHDYLGK-YVVLFFYPKDFTYVCPTEIIAFNDRAK 451 +++G+ AP F A AV + E++LHD++GK YV+L+FYP DFT+VCP+EIIA + Sbjct: 3 SYVGREAPYFKAEAVFADNTFGEVNLHDFIGKKYVLLYFYPLDFTFVCPSEIIALDKALD 62 Query: 452 EFEALDTQLICASTDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCL-GESN 628 F+ + +LI S D+ HLAW +TP GG+G ++ +++D+TK IS Y L G+S Sbjct: 63 AFKERNVELIGCSVDSKYTHLAWKKTPLTKGGIGNIQHTLISDITKSISRSYNVLFGDS- 121 Query: 629 GFPYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQPG 799 R +ID++G++Q +NN +GRSV+E LR++ A Q +E+HG+VCPANW+ G Sbjct: 122 -VSLRAFVLIDKQGVVQHLLVNNLAIGRSVEEVLRIIDAVQHHEQHGDVCPANWKKG 177 >Plasmodium_falciparum_3D7|MAL12|PFL0725w|Pf Annotation|Plasmodium_falciparum_Stanford|(protein coding) thioredoxin peroxidase Length = 216 Score = 139 bits (350), Expect = 9e-34 Identities = 70/176 (39%), Positives = 106/176 (60%), Gaps = 2/176 (1%) Frame = +2 Query: 278 AFIGKPAPAFTAPAVVRG-DIDEISLHDYLG-KYVVLFFYPKDFTYVCPTEIIAFNDRAK 451 + + K A FTA + + +I + L ++G KY L FYP ++T+VCPTEII FN K Sbjct: 20 SLVTKKAYNFTAQGLNKNNEIINVDLSSFIGQKYCCLLFYPLNYTFVCPTEIIEFNKHIK 79 Query: 452 EFEALDTQLICASTDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCLGESNG 631 +FE + +L+ S D+ HLAW P GG+G ++ +V+D+ K IS Y L + N Sbjct: 80 DFENKNVELLGISVDSVYSHLAWKNMPIEKGGIGNVEFTLVSDINKDISKNYNVLYD-NS 138 Query: 632 FPYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQPG 799 F RGL++ID+ G ++ T+N+ P+GR+V E LR + + + GEVCP NW+ G Sbjct: 139 FALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSIIHVDTSGEVCPINWKKG 194 >Plasmodium_falciparum_3D7|MAL8|PF08_0131|Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) 1-cys peroxidoxin Length = 220 Score = 84.3 bits (207), Expect = 4e-17 Identities = 62/201 (30%), Positives = 97/201 (48%), Gaps = 12/201 (5%) Frame = +2 Query: 284 IGKPAPAFTAPAVVRGDIDEI-SLHDYLG-KYVVLFFYPKDFTYVCPTEIIAFNDRAKEF 457 +G P FTA A ++D + + Y+G + +LF +P DFT VC TE+ F +EF Sbjct: 5 LGATFPNFTATA---SNVDGVFDFYKYVGDNWAILFSHPHDFTPVCTTELAEFGKMHEEF 61 Query: 458 EALDTQLICASTDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCLGES---- 625 L+ +LI S ++ E H W + G L K IPMV D ++ ++ + + E Sbjct: 62 LKLNCKLIGFSCNSKESHDQWIEDIKFYGNLDKWDIPMVCDESRELANQLKIMDEKEKDI 121 Query: 626 NGFPY--RGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQPG 799 G P R ++ I + +++ + GR+ E LR++K+ Q H P NW+ G Sbjct: 122 KGLPLTCRCVFFISPDKKVKATVLYPATTGRNSQEILRVLKSLQLTNTHPVATPVNWKEG 181 Query: 800 DATI----VDNPVESQKYFKN 850 D VDN + K FKN Sbjct: 182 DKCCILPSVDN-ADLPKLFKN 201 >Plasmodium_falciparum_3D7|MAL10|PF10_0268|Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) merozoite capping protein 1 Length = 393 Score = 32.7 bits (73), Expect = 0.12 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 2/99 (2%) Frame = +2 Query: 338 DEISLHDYLGKYVVLFFYPKDFTYVCPTEIIAFNDRAKEFEALDTQLICASTDTPEVHLA 517 +E+ H + +V+F YPK T C + F ++ +EF + S DT E L Sbjct: 31 NEVEKHKENNEGIVVFTYPKANTPGCTKQAELFKEKHEEFVNNKYVVYGLSADTAEDQLK 90 Query: 518 WTRTPRNVGGLGKMKIP--MVADVTKVISAKYGCLGESN 628 W K+++P ++ DV K + G E + Sbjct: 91 WKE---------KLELPYELLCDVDKNLLKLLGLTNEED 120 >Plasmodium_falciparum_3D7|MAL10|PF10_0045|Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical protein Length = 3014 Score = 28.9 bits (63), Expect = 1.8 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +2 Query: 320 VVRGDIDEISLHDYLGKYVVLFFYPK 397 ++ +IDEISL+D G Y++ PK Sbjct: 2363 IIEKNIDEISLYDTSGTYIISIIIPK 2388 >Plasmodium_falciparum_3D7|MAL11|PF11_0129|Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical protein Length = 845 Score = 27.3 bits (59), Expect = 5.1 Identities = 9/30 (30%), Positives = 18/30 (60%) Frame = +2 Query: 326 RGDIDEISLHDYLGKYVVLFFYPKDFTYVC 415 + DI+ + + ++ Y++ Y KDFT+ C Sbjct: 757 KNDIENVEKYKHIHMYILYNNYQKDFTFSC 786 >Plasmodium_falciparum_3D7|MAL4|PFD0545w|Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein Length = 1571 Score = 26.9 bits (58), Expect = 6.7 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 5/58 (8%) Frame = -3 Query: 469 VKSFELLGTIVEGNDFSRAHVGEILGVEEQDDILSEVVM-----ERNFINVTADNSRS 311 + S+E + ++ + N F EI+ +D ++++VM E NF+++ N +S Sbjct: 463 ISSYETVSSLNDNNIFLFEKKNEIMKEPTRDRNMNDIVMSGRTNEENFVSMNMSNEKS 520 >Plasmodium_falciparum_3D7|MAL13|MAL13P1.342|Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical protein Length = 600 Score = 26.6 bits (57), Expect = 8.7 Identities = 11/25 (44%), Positives = 17/25 (68%) Frame = +2 Query: 650 YVIDREGILQSYTINNNPVGRSVDE 724 Y I + IL+ YTINNN + ++D+ Sbjct: 49 YFIKDDKILKIYTINNNIIMENIDD 73 Database: /home/amadoui/banque/plasm_falciparum Posted date: Mar 30, 2007 3:37 PM Number of letters in database: 4,065,673 Number of sequences in database: 5411 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,006,757 Number of Sequences: 5411 Number of extensions: 98463 Number of successful extensions: 231 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 220 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 227 length of database: 4,065,673 effective HSP length: 92 effective length of database: 3,567,861 effective search space used: 777793698 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)