BLASTX 2.2.9 [May-01-2004]
BLASTX 2.2.9 [May-01-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig2455 NX0AMYA23YA08CM1.SCF NX0AMYA26YE07CM1.SCF
NX0AMYA26YB12CM1.SCF
         (933 letters)

Database: banque/phyto_sojae 
           19,276 sequences; 9,479,895 total letters

Searching.......................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sojae_141953                                                          282   2e-76
sojae_108742                                                          238   2e-63
sojae_108745                                                          216   1e-56
sojae_109763                                                          199   2e-51
sojae_108690                                                           61   9e-10
sojae_134062                                                           41   7e-04
sojae_134066                                                           41   7e-04
sojae_109445                                                           35   0.039
sojae_140949                                                           34   0.086
sojae_132565                                                           30   1.2  
sojae_136574                                                           29   3.6  
sojae_131126                                                           29   3.6  
sojae_143027                                                           28   4.7  
sojae_133686                                                           28   6.2  
sojae_128922                                                           28   8.1  
sojae_143216                                                           28   8.1  
sojae_134070                                                           28   8.1  

>sojae_141953
          Length = 378

 Score =  282 bits (721), Expect = 2e-76
 Identities = 137/200 (68%), Positives = 157/200 (78%)
 Frame = +2

Query: 257 VKYPAPKAFIGKPAPAFTAPAVVRGDIDEISLHDYLGKYVVLFFYPKDFTYVCPTEIIAF 436
           V+YP   A +   AP FTA AV+ GDI +ISL  Y G+YVVLFFYPKDFTYVCPTEIIAF
Sbjct: 64  VQYPPVGARVQHQAPQFTAQAVLDGDITDISLDTYRGQYVVLFFYPKDFTYVCPTEIIAF 123

Query: 437 NDRAKEFEALDTQLICASTDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCL 616
           NDRA EF+AL+TQLI  S D+PE HLAWTR PRN GGLGKM IP+V+D+TKVISAKYG L
Sbjct: 124 NDRADEFKALNTQLIAVSCDSPESHLAWTRLPRNKGGLGKMDIPIVSDITKVISAKYGVL 183

Query: 617 GESNGFPYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQP 796
            E  G   RGL+++D+EG+LQ  TINN P+GRSVDE LRL+KA QF EEHGEVCPANWQP
Sbjct: 184 VEEAGVALRGLFIMDKEGVLQQITINNMPIGRSVDETLRLIKALQFVEEHGEVCPANWQP 243

Query: 797 GDATIVDNPVESQKYFKNVK 856
           GD TI   P +S +YF  VK
Sbjct: 244 GDKTIKATPKDSYEYFSTVK 263


>sojae_108742
          Length = 208

 Score =  238 bits (608), Expect = 2e-63
 Identities = 114/193 (59%), Positives = 148/193 (76%), Gaps = 3/193 (1%)
 Frame = +2

Query: 284 IGKPAPAFTAPAVVRGDIDEISLHDYLGKYVVLFFYPKDFTYVCPTEIIAFNDRAKEFEA 463
           I  PAP FTA AVV G+  +ISL DY G+YVVLFFYP DFT+VCPTEI AF+DR ++F+ 
Sbjct: 5   IRNPAPEFTADAVVDGEFKKISLSDYKGQYVVLFFYPLDFTFVCPTEICAFSDRVEDFKK 64

Query: 464 LDTQLICASTDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCL---GESNGF 634
           L+TQ+I AS D+   HLAW  TPR  GGLG+M IP++ADVTK +S KY  L   G+  G 
Sbjct: 65  LNTQVIGASIDSKFSHLAWINTPRKKGGLGEMNIPLIADVTKELSTKYEVLVQDGDDKGV 124

Query: 635 PYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQPGDATIV 814
            +RGL++ID+EGIL+  TIN+ P+GR+VDE LRL++AFQF+EEHG+VCPANW+ G  ++V
Sbjct: 125 AFRGLFIIDKEGILRQITINDLPIGRNVDEVLRLIEAFQFHEEHGDVCPANWKKGAKSMV 184

Query: 815 DNPVESQKYFKNV 853
            +P +S KYF+ V
Sbjct: 185 ADPKDSLKYFETV 197


>sojae_108745
          Length = 240

 Score =  216 bits (550), Expect = 1e-56
 Identities = 111/196 (56%), Positives = 137/196 (69%), Gaps = 3/196 (1%)
 Frame = +2

Query: 269 APKAFIGKPAPAFTAPAVVRGDIDEISLHDYLGKYVVLFFYPKDFTYVCPTEIIAFNDRA 448
           APK  I   APAFTA AVV G+   +SL DY GKYVVLFFYP DFT+VCPTEIIAF+++A
Sbjct: 11  APK--IRHAAPAFTADAVVDGEFKTVSLSDYKGKYVVLFFYPMDFTFVCPTEIIAFSEKA 68

Query: 449 KEFEALDTQLICASTDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCL---G 619
            EF  L  +++  S D+   HLAW  TPR  GGLG++ IP++AD  K IS  Y  L   G
Sbjct: 69  AEFRKLGCEVLGCSVDSKFSHLAWINTPRKKGGLGELDIPLIADFNKEISKAYDVLIDVG 128

Query: 620 ESNGFPYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQPG 799
           E  G  +RGL++ID EG L+  TIN+ PVGR+VDE LRLV+AFQF +EHGEVCPA W+ G
Sbjct: 129 EETGATFRGLFIIDGEGKLRQSTINDCPVGRNVDEVLRLVEAFQFTDEHGEVCPAGWKKG 188

Query: 800 DATIVDNPVESQKYFK 847
             TI     ES++YF+
Sbjct: 189 KKTIKPTVEESKEYFE 204


>sojae_109763
          Length = 258

 Score =  199 bits (505), Expect = 2e-51
 Identities = 100/205 (48%), Positives = 138/205 (67%), Gaps = 7/205 (3%)
 Frame = +2

Query: 251 NKVKYPAPKAFIGKPAPAFT-APAVVRGDIDEISLHDYLGKYVVLFFYPKDFTYVCPTEI 427
           N+    A K    KPAP F+   AVV    +++SL DY GK+++LFFYP DFT+VCPTEI
Sbjct: 54  NRYSASAFKVTPRKPAPDFSNVNAVVNEKFEKVSLSDYKGKWLILFFYPFDFTFVCPTEI 113

Query: 428 IAFNDRAKEFEALDTQLICASTDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKY 607
           ++F+D   +F +++ +++  STD+   HLAW +TPR+ GGLGKM IP++AD++K IS  Y
Sbjct: 114 VSFSDSVDQFRSINAEVVAISTDSHHTHLAWVKTPRSEGGLGKMNIPLIADISKRISEDY 173

Query: 608 GCL-----GESNGFPYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEH-G 769
           G L      E  G   RGL++ID EG ++S  IN++ VGRSVDE LR++KAFQ+   H  
Sbjct: 174 GVLVTDEEDEMFGAALRGLFIIDPEGTIRSIQINDDAVGRSVDETLRILKAFQYSASHPH 233

Query: 770 EVCPANWQPGDATIVDNPVESQKYF 844
           EVCPANW+PG  TI  + VE   +F
Sbjct: 234 EVCPANWKPGGETIKTDHVEKMDFF 258


>sojae_108690
          Length = 198

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
 Frame = +2

Query: 332 DIDEISLHDYL-GKYVVLFFYPKDFTYVCPTEIIAFNDRAKEFEALDTQLICASTDTPEV 508
           D    SLH Y  G + +LF +P DFT +C TE+               +L+  S +    
Sbjct: 22  DDSSSSLHAYFKGSWGLLFSHPDDFTPICTTEL--------------GELLALSCNDVAS 67

Query: 509 HLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCLGESN----GFP--YRGLYVID--- 661
           H  W        G  K+  P+VAD ++ I+A+ G L + +    G P   R L+V+D   
Sbjct: 68  HKRWIVDIEKYAG-AKVNFPIVADPSRPIAAQLGMLSQDDLDKQGMPLTVRTLFVLDPRV 126

Query: 662 REGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQPGDATIVDNPVESQK 838
           R  ++ +Y  +     R+  E LR++ + Q  +E     P NW+ G+   ++  V +++
Sbjct: 127 RVRLMLTYPASTR---RNFMEVLRVLDSLQLTDEKSLATPVNWKQGERVCINPQVSTEE 182


>sojae_134062
          Length = 201

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 50/175 (28%), Positives = 70/175 (40%), Gaps = 8/175 (4%)
 Frame = +1

Query: 358 LPRKVCRLVLLPQGFHLRVPD*NHCLQRS-----CQGVRSS*HAIDLRIDRHARSAFGLD 522
           L  +V R +LLP G H+RVP  +H +QR        G+R +     L++      A G+D
Sbjct: 32  LQGQVRRALLLPDGLHVRVPHGDHRVQREGGRVPQTGLRGAGLQRGLQV-----LAPGVD 86

Query: 523 PHPTQRRWFGQDEDPHGG*CDQGD---LGQVWLLG*IQWLPIPWLVRD*SRRYLAKLHDX 693
            H  Q    G+   P      QGD   L +    G      +P  V    R   A  HD 
Sbjct: 87  QHAAQEGRPGRAGHPADRRLQQGDLQGLRRADRRGRGDGRDVPRPVHHRRRGQAAPEHDQ 146

Query: 694 XXXXXXXXXXXFAFGQGFPILRRTRRSVPGQLATW*CDYR*QPSRIAKVLQERQV 858
                       A G G P+  R RR VP +L     D++     +  VL+ RQ+
Sbjct: 147 RLPRGPQRGRGAASGGGLPVHGRARRGVPRRLEEGQEDHQAHGRGVQGVLRGRQL 201


>sojae_134066
          Length = 220

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 49/177 (27%), Positives = 70/177 (39%), Gaps = 8/177 (4%)
 Frame = +1

Query: 358 LPRKVCRLVLLPQGFHLRVPD*NHCLQRS-----CQGVRSS*HAIDLRIDRHARSAFGLD 522
           L  +V R +LLP G H+RVP  +H +QR        G+R +     L++      A G+D
Sbjct: 44  LQGQVRRALLLPDGLHVRVPHGDHRVQREGGRVPQTGLRGAGLQRGLQV-----LAPGVD 98

Query: 523 PHPTQRRWFGQDEDPHGG*CDQGD---LGQVWLLG*IQWLPIPWLVRD*SRRYLAKLHDX 693
            H  Q    G+   P      QGD   L +    G      +P  V    R   A  HD 
Sbjct: 99  QHAAQEGRPGRAGHPADRRLQQGDLQGLRRADRRGRGDGRDVPRPVHHRRRGQAAPEHDQ 158

Query: 694 XXXXXXXXXXXFAFGQGFPILRRTRRSVPGQLATW*CDYR*QPSRIAKVLQERQVES 864
                       A G G P+  R RR VP +L     D++    R  ++L   ++ S
Sbjct: 159 RLPRGPQRGRGAASGGGLPVHGRARRGVPRRLEEGQEDHQAHGRRFQRILWRGELSS 215


>sojae_109445
          Length = 226

 Score = 35.4 bits (80), Expect = 0.039
 Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 12/181 (6%)
 Frame = +2

Query: 320 VVRGDIDEISLHDYL-GKYVVLFFYPKDFTYVCPTEIIAFNDRAKEFEALDTQLIC---A 487
           V    +  +   DYL G + ++  +P+    V  +E+        +FEA + +++    +
Sbjct: 18  VCESQVGVVRAQDYLSGCWGIVCSFPQAKHPVWLSELGMLQKLHDQFEARNARVLALHVS 77

Query: 488 STDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCLG--------ESNGFPYR 643
           S       LA     + V    K+  P++AD    +S + G +         ++   P+ 
Sbjct: 78  SVREQTPFLADVNETQEV----KLGFPVMADEDGELSRRLGLVAAGAPKHAADAGRLPFS 133

Query: 644 GLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQPGDATIVDNP 823
              V+D +  ++  T     VGR+  E LR + A Q       V P NW+  D   V   
Sbjct: 134 CTIVLDLDLTVRMLTYYPMGVGRNFYEVLRALDALQLSTFEQVVTPVNWKVSDDVFVQPD 193

Query: 824 V 826
           V
Sbjct: 194 V 194


>sojae_140949
          Length = 370

 Score = 34.3 bits (77), Expect = 0.086
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +2

Query: 377 VLFFYPKDFTYVCPTEIIAFNDRAKEFEALDTQLICASTDTPEVHLAWTRTPR 535
           + F YPK  T  C T+   +ND  +   A    +     DTP   LAW  + +
Sbjct: 247 IFFMYPKADTPGCTTQACGYNDNLEAINAAGFDVYGLGADTPAELLAWKESQK 299


>sojae_132565
          Length = 437

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -3

Query: 643 TVWEAIGFTQAAILGRDHLGHISHHGDLHLAQTTDV 536
           TVWEA G  +  +LG  HL   S   D H+    DV
Sbjct: 107 TVWEADGEVRVRLLGLSHLTDGSQTADAHVVMFKDV 142


>sojae_136574
          Length = 483

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +2

Query: 323 VRGDIDEISLHDYLGKYVVLFFYPKDFTYVCPTEIIAFNDR 445
           VRG ID   +HD+  ++ V F+  KD  +V   E++    +
Sbjct: 299 VRGCIDTYGVHDFKDRHGVYFYKDKDHIFVRFIELLVMQKK 339


>sojae_131126
          Length = 1035

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 15/28 (53%), Positives = 16/28 (57%)
 Frame = -3

Query: 652 VQATVWEAIGFTQAAILGRDHLGHISHH 569
           V ATV EA+  T AA   R H GH  HH
Sbjct: 298 VCATVLEAVVATSAAASPRQHHGHRRHH 325


>sojae_143027
          Length = 199

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = -3

Query: 121 NQRLALRKRAHSRSGDRATKL--SARGAQDGRAEMLH 17
           ++R+   +  H+R+G    +    ARGA++GRAE+LH
Sbjct: 71  DRRVRRDRGPHARAGAAQARRHQGARGAREGRAELLH 107


>sojae_133686
          Length = 1340

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
 Frame = +2

Query: 266 PAPKAFIGKPAPAFTAPA-VVRGDIDEISLHD 358
           PAP   +  P PA  APA VV    D +SL D
Sbjct: 92  PAPSVEVAAPPPAPVAPAPVVTNTFDSVSLDD 123


>sojae_128922
          Length = 1011

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 58   STSSPCRRCGCARVSSKPIFDSTKDASS 141
            STSS  +  G  R+SS P+    KD SS
Sbjct: 973  STSSGAQSKGVTRISSAPVLHKNKDGSS 1000


>sojae_143216
          Length = 218

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 125 VESKIGFE-ETRAQPQRRQGDEVECARRARRQS 30
           V ++ G + E RA   RR+ D+  CARR RR +
Sbjct: 163 VRTRSGLQAERRAWQARREVDQAACARRGRRDA 195


>sojae_134070
          Length = 246

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -2

Query: 125 VESKIGFE-ETRAQPQRRQGDEVECARRARRQS 30
           V ++ G + E RA   RR+ D+  CARR RR +
Sbjct: 191 VRTRSGLQAERRAWQARREVDQAACARRGRRDA 223


  Database: banque/phyto_sojae
    Posted date:  Mar 29, 2007  5:00 PM
  Number of letters in database: 9,479,895
  Number of sequences in database:  19,276
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,935,030
Number of Sequences: 19276
Number of extensions: 330020
Number of successful extensions: 1151
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1078
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 9,479,895
effective HSP length: 98
effective length of database: 7,590,847
effective search space used: 1609259564
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)