BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig1815 NX0AMYA13YF12CM1.SCF NX0AMYA13YJ03CM1.SCF (890 letters) Database: banque/phyto_sojae 19,276 sequences; 9,479,895 total letters Searching.......................................done Score E Sequences producing significant alignments: (bits) Value sojae_108638 184 1e-50 sojae_132609 187 9e-49 sojae_133117 146 1e-35 sojae_132604 91 6e-19 sojae_138962 80 2e-15 sojae_127971 70 1e-12 sojae_140244 33 0.18 sojae_144558 31 0.90 sojae_142465 31 0.90 sojae_144850 25 1.3 sojae_140447 30 2.0 sojae_127541 29 2.6 sojae_129344 29 2.6 sojae_128482 29 3.4 sojae_128623 28 4.5 sojae_136371 28 5.8 sojae_140957 28 7.6 sojae_142201 28 7.6 sojae_130847 27 9.9 sojae_137778 27 9.9 >sojae_108638 Length = 228 Score = 184 bits (468), Expect(2) = 1e-50 Identities = 87/145 (60%), Positives = 110/145 (75%) Frame = +1 Query: 166 QYRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIM 345 +Y+G+V L VNV+S+ GLT NY +L L AKY+++GLE+LAFPCNQF GQEPGT+E+IM Sbjct: 84 KYKGKVVLAVNVSSKCGLTPTNYPELQELYAKYKDEGLEVLAFPCNQFAGQEPGTHEEIM 143 Query: 346 EFVKTFGITFQFFNKCDVNGDNTVPVFQYLKHHLSGLLGNFIKWNFTKFLVDREGQPFKR 525 EFVK + +TF FF K DVNG PVF YLK L G G+F+KWNFTKFLVDR GQP+KR Sbjct: 144 EFVKQYNVTFPFFEKHDVNGATARPVFTYLKTKLPGSFGDFVKWNFTKFLVDRNGQPYKR 203 Query: 526 YSPQTAPNDFEGDIVELLSKQAPRE 600 ++P+ P FE DI LL+++A E Sbjct: 204 FAPKDRPLSFEEDIKTLLAQKASEE 228 Score = 33.1 bits (74), Expect(2) = 1e-50 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +2 Query: 89 DPTKAKSFFELSAVDMAGQTVPMSKY 166 D K KSF+EL DMAG V M+KY Sbjct: 60 DTAKIKSFYELKDFDMAGNEVSMAKY 85 >sojae_132609 Length = 587 Score = 187 bits (474), Expect(2) = 9e-49 Identities = 89/154 (57%), Positives = 112/154 (72%) Frame = +1 Query: 166 QYRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIM 345 +Y+G+V LVVNV+S+ GLT NY +L L KY+ +GL +L FPCNQF QEPGT+E+I+ Sbjct: 363 EYKGKVVLVVNVSSKCGLTPTNYPELQQLYEKYQEEGLVVLGFPCNQFKSQEPGTHEEII 422 Query: 346 EFVKTFGITFQFFNKCDVNGDNTVPVFQYLKHHLSGLLGNFIKWNFTKFLVDREGQPFKR 525 EFVK + ++F F K DVNG N P+F YLK L G GN+IKWNFTKFLVDR GQPFKR Sbjct: 423 EFVKQYNVSFPLFEKHDVNGSNARPIFTYLKAKLPGTFGNYIKWNFTKFLVDRNGQPFKR 482 Query: 526 YSPQTAPNDFEGDIVELLSKQAPREESKEEAKQE 627 Y+P P FE DI ELL+K E+++EE K+E Sbjct: 483 YAPTDLPLSFEEDIKELLAKAPEPEKTEEEPKEE 516 Score = 24.6 bits (52), Expect(2) = 9e-49 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +2 Query: 98 KAKSFFELSAVDMAGQTVPMSKY 166 +AKSF+EL DM + V M +Y Sbjct: 342 EAKSFYELKDFDMDKKEVSMEEY 364 >sojae_133117 Length = 218 Score = 146 bits (368), Expect = 1e-35 Identities = 75/143 (52%), Positives = 93/143 (65%), Gaps = 1/143 (0%) Frame = +1 Query: 178 RVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIMEFV- 354 RV LVVNVAS G T NY +L L KY ++G +L FPCNQFGGQEPGT E I++F Sbjct: 59 RVILVVNVASDCGYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTAEGILKFTQ 118 Query: 355 KTFGITFQFFNKCDVNGDNTVPVFQYLKHHLSGLLGNFIKWNFTKFLVDREGQPFKRYSP 534 + + +TF F K DVNGDN P+F++LK L G + N IKWNFTKFLV +PFKRY Sbjct: 119 EKYHVTFPLFTKVDVNGDNAHPLFKFLKQQLDGFITNDIKWNFTKFLVVNH-EPFKRYGT 177 Query: 535 QTAPNDFEGDIVELLSKQAPREE 603 T+P + E DIV+ L +E Sbjct: 178 TTSPLEMENDIVQALQSSQHVDE 200 >sojae_132604 Length = 547 Score = 91.3 bits (225), Expect = 6e-19 Identities = 60/146 (41%), Positives = 78/146 (53%), Gaps = 8/146 (5%) Frame = +1 Query: 166 QYRGRVCLVVNVASQ*GLTQLNYTQL---AALDAKYRNQGLEILAFPCNQFGGQEPGTNE 336 + RG V L+VNV S G N QL A L KY + GL+++AFP QFG E +E Sbjct: 404 ELRGHVALLVNVTS--GSCNTNAEQLLELADLSKKYEDAGLKVVAFPSAQFGDAEFDNDE 461 Query: 337 KIME-FVKTFGITFQFFNKCDVNGDNTVPVFQYLKHHLSGLLGN----FIKWNFTKFLVD 501 +++E F + FG+ F DVNG N + K + G + FI+ NF KFLVD Sbjct: 462 ELVEHFQELFGVRFPVLTTRDVNGPNARDALLFCKTRVPGAARSAANAFIENNFVKFLVD 521 Query: 502 REGQPFKRYSPQTAPNDFEGDIVELL 579 REG+ KR+ P P E DI ELL Sbjct: 522 REGRLVKRFGPNDLPLSMETDIQELL 547 >sojae_138962 Length = 645 Score = 79.7 bits (195), Expect = 2e-15 Identities = 51/139 (36%), Positives = 68/139 (48%) Frame = +1 Query: 169 YRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIME 348 +R + LVVN AS+ + QL L KY + GL ++A P N F GQEPG N +I+E Sbjct: 462 FRFKAALVVNTASKCSHSA-QLKQLQQLHEKYSDLGLVVVAVPSNDFAGQEPGDNSEILE 520 Query: 349 FVKTFGITFQFFNKCDVNGDNTVPVFQYLKHHLSGLLGNFIKWNFTKFLVDREGQPFKRY 528 FG TF K V GD P F+ + S + WNF KFLVD G Sbjct: 521 RYAAFGATFAIAEKTPVTGDKAHPFFKKIADKYSASVAP--TWNFDKFLVDHRGD----- 573 Query: 529 SPQTAPNDFEGDIVELLSK 585 PND E + E++++ Sbjct: 574 MRAVFPNDTEPLVQEVIAE 592 >sojae_127971 Length = 285 Score = 70.5 bits (171), Expect = 1e-12 Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 33/169 (19%) Frame = +1 Query: 169 YRGRVCLVVNVASQ*GLTQLNYTQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIME 348 + G+ LVVNVAS T Y QL L ++ L I+ PCNQFG QE E+I + Sbjct: 108 FAGKPILVVNVASHCNSTTKAYVQLNDLAKRFPE--LVIIGCPCNQFGHQENLNGEEIYQ 165 Query: 349 FV------KTFGITFQFFNKCDVNGDNTVPVFQYLKHHL---------------SGLLGN 465 + K F F K +VNG N +F +L+ L SG+ + Sbjct: 166 SLRHIRPGKGFEPAFMLTEKVEVNGANAHALFNFLRITLPYPCDRTLLDEMSTPSGVFSH 225 Query: 466 ------------FIKWNFTKFLVDREGQPFKRYSPQTAPNDFEGDIVEL 576 + WNF KFL+ +G P+KRYSP+ DF G I ++ Sbjct: 226 PMRLIWMPVTRADVSWNFEKFLISPDGTPYKRYSPRL---DFTGMIEDI 271 >sojae_140244 Length = 904 Score = 33.1 bits (74), Expect = 0.18 Identities = 20/64 (31%), Positives = 32/64 (50%) Frame = -3 Query: 546 GGGLGTVSLERLALAIDEELGKVPLDKVAQESREVVLQVLKHWHRVVAIDITLVEELKRD 367 GGG G +R + +E P A S + LQ L++WHR + +D + EL+R+ Sbjct: 17 GGGGGNNKRKRKRVGKAKEAAAAP-PSAASVSVDAQLQTLENWHRALTVD---MRELRRE 72 Query: 366 AKRL 355 R+ Sbjct: 73 GARV 76 >sojae_144558 Length = 1291 Score = 30.8 bits (68), Expect = 0.90 Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 14/216 (6%) Frame = -3 Query: 807 LEPHKATAQLARLKPTQK--VSLAVQDCILKTLLTSRLEEESVIHVDDARFQLDNA-RHH 637 L P +A A A + Q+ +LA +D + + L+ E + + + D + A R Sbjct: 422 LAPVRARADAAEAERDQQRDAALAERDHVTRVLVVVEQERDRALDMRDQVCRTSTALRRE 481 Query: 636 XXXXXXXXXXXXXXXXXXGQELDNVAFEVVGGGLGTVSLERLALAIDEEL-------GKV 478 Q D E +LE+ +DEEL + Sbjct: 482 RDAAVTERDRARQAVAALEQRRDAAVAERDQARQALTALEQQRAPVDEELRAARASLSQS 541 Query: 477 PLDKVAQESREVVLQVLKHWHRVVAIDITLVEELKRDAKRLDKFHDLFVRARFL----TS 310 ++ A ++ V LQ RV A+ + EEL+RDA R+ + + A L S Sbjct: 542 RMEIEAAQNLNVPLQ--DDLRRVNALLVANAEELRRDAPRIHELEESVATATTLRVAAES 599 Query: 309 KLIAREC*DFQALIAVFRIKSGELSVVELRQASLRR 202 ++ + + A + ++G LS +R++S +R Sbjct: 600 EMARAQAGELCAATRAVQYRAGWLS---MRRSSQQR 632 >sojae_142465 Length = 837 Score = 30.8 bits (68), Expect = 0.90 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 527 TVPRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 TVP+PP T A SSS ++ P + KP+ N Sbjct: 592 TVPQPPATAVPAQASSSSTSEAPKRTTESKPNPN 625 >sojae_144850 Length = 1880 Score = 25.0 bits (53), Expect(2) = 1.3 Identities = 13/40 (32%), Positives = 18/40 (45%) Frame = +3 Query: 426 SVPEAPPLGTPGQLYQVELYQVPRRSRGPTVQAIQSPDRP 545 S+P APPL TP L + Y S + + +P P Sbjct: 720 SIPAAPPLSTP-SLSSLSSYHASSESERASGTGVLAPQGP 758 Score = 23.5 bits (49), Expect(2) = 1.3 Identities = 13/42 (30%), Positives = 20/42 (47%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSKNSLK*CRALSS 658 P+ PP+ S + L SS PG N + ++ + R SS Sbjct: 755 PQGPPSRSPSDLDSSLFGTTPGSNESTFSAASAARSSRGSSS 796 Score = 23.1 bits (48), Expect(2) = 7.1 Identities = 16/47 (34%), Positives = 21/47 (44%) Frame = +2 Query: 530 VPRPPPTTSKATLSSSCPNKRPGKNPRRKPSKNSLK*CRALSSWNRA 670 +PRPP T S +++ P P PS +SL A S RA Sbjct: 709 LPRPPSTQSVSSI--------PAAPPLSTPSLSSLSSYHASSESERA 747 Score = 22.7 bits (47), Expect(2) = 7.1 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 2/20 (10%) Frame = +3 Query: 495 RRSRGPTVQAIQSPD--RPQ 548 RR+RGP V + PD RPQ Sbjct: 687 RRTRGPQVSSTGEPDSKRPQ 706 >sojae_140447 Length = 772 Score = 29.6 bits (65), Expect = 2.0 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = +3 Query: 414 GASVSVPEAPPLGTPGQLYQVELYQVPRRSRGPTVQAIQSPDRPQ 548 GASVSVPE PP +L+ + Q P + P V P PQ Sbjct: 635 GASVSVPEPPPSRKLSKLF--KRVQPPPTATPPAVTETPPPPNPQ 677 >sojae_127541 Length = 1486 Score = 29.3 bits (64), Expect = 2.6 Identities = 18/66 (27%), Positives = 29/66 (43%) Frame = +1 Query: 235 TQLAALDAKYRNQGLEILAFPCNQFGGQEPGTNEKIMEFVKTFGITFQFFNKCDVNGDNT 414 T + + + Q + + P + E GT EKI EF T I + N+ D N ++T Sbjct: 521 TTATGVTSLFSPQAVSMTPAPTTKAPVAEQGTVEKIGEFTFTLPIRTEGVNQADANDEDT 580 Query: 415 VPVFQY 432 F + Sbjct: 581 RVRFMF 586 >sojae_129344 Length = 412 Score = 29.3 bits (64), Expect = 2.6 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = -3 Query: 204 RDVHNKTDAATVLYLLIGTVWPAISTADNSKNDL 103 RDV +K+D VLY+ G W + + K+DL Sbjct: 31 RDVISKSDPFAVLYVKSGAGWSQVGKTEAKKDDL 64 >sojae_128482 Length = 1859 Score = 28.9 bits (63), Expect = 3.4 Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%) Frame = -3 Query: 276 ALIAVFRIKSGELSVVELRQASLRRDVHNKTDAATVLYL--LIGTVWPAISTADNSKNDL 103 AL AVF K+GE +R S ++ V + D L L L ++P+ +D Sbjct: 1514 ALRAVFAEKNGESGAANIRMRSRKQKVQEREDITGKLLLWDLFLQLFPSSGNSDGEGASS 1573 Query: 102 ALVGSS 85 L+ SS Sbjct: 1574 TLIASS 1579 >sojae_128623 Length = 455 Score = 28.5 bits (62), Expect = 4.5 Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 3/76 (3%) Frame = -3 Query: 579 QELDNVAFEVVGGGLGTVSLERLALAIDEELGKVPLDKVAQESREVVL---QVLKHWHRV 409 ++L + E GG GT+ +++++ + + L ++A++ E+++ Q+ K +HR Sbjct: 143 EQLTKMLTEYENGGGGTLQVQQVSSSSSLSEKEQQLVQIARQKNELLVENAQLRKQFHRA 202 Query: 408 VAIDITLVEELKRDAK 361 A +L + L + K Sbjct: 203 TAFATSLQQMLNNEHK 218 >sojae_136371 Length = 281 Score = 28.1 bits (61), Expect = 5.8 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +1 Query: 514 PFKRYSPQTAPNDFEGDIVELLSKQAPRE 600 P KR PQ A F D+V LLS P + Sbjct: 117 PAKREEPQVAQKTFNNDLVGLLSDPVPAQ 145 >sojae_140957 Length = 932 Score = 27.7 bits (60), Expect = 7.6 Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%) Frame = -3 Query: 531 TVSLERLALAIDEELGKVPLDKVAQESREV---VLQVLKHWHRVVAIDITLVEELKRDAK 361 T +RL + E+ +V L + E V L V H ++ LVEELKRD + Sbjct: 444 TKETQRLVTRVHEK--EVELANLQNEMARVGVDALNVQNHTAQLAEAQRALVEELKRDDQ 501 Query: 360 RLDKFHDLFVRAR 322 R+++ +L +R R Sbjct: 502 RVER-AELEIRQR 513 >sojae_142201 Length = 268 Score = 27.7 bits (60), Expect = 7.6 Identities = 11/21 (52%), Positives = 14/21 (66%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRP 595 P P PTT+ +T SS C +RP Sbjct: 248 PAPVPTTAPSTSSSKCLRRRP 268 >sojae_130847 Length = 129 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 7/34 (20%) Frame = +2 Query: 533 PRPP-------PTTSKATLSSSCPNKRPGKNPRR 613 PRPP P+ S S CP ++P PRR Sbjct: 16 PRPPVQCQKSLPSCSSPARCSPCPPEKPSSRPRR 49 >sojae_137778 Length = 2103 Score = 27.3 bits (59), Expect = 9.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRK 616 P PP T +K S+ K P K+P++K Sbjct: 913 PAPPQTDAKQNESTKSATKSPKKSPKKK 940 Database: banque/phyto_sojae Posted date: Mar 29, 2007 5:00 PM Number of letters in database: 9,479,895 Number of sequences in database: 19,276 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,344,784 Number of Sequences: 19276 Number of extensions: 329378 Number of successful extensions: 1325 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 1194 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1317 length of database: 9,479,895 effective HSP length: 97 effective length of database: 7,610,123 effective search space used: 1514414477 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)