BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NX0AMYA7YC17CM1.SCF (idq=218988) (968 letters) Database: /home/amadoui/banque/phyto_ramorum 16,066 sequences; 7,352,630 total letters Searching.................................done Score E Sequences producing significant alignments: (bits) Value 42015 167 7e-42 42013 165 2e-41 75058 134 7e-32 75982 104 6e-23 39250 79 2e-15 47446 64 8e-11 74938 39 0.002 79939 35 0.041 75543 33 0.12 75422 29 3.0 74531 28 3.9 74534 28 3.9 82706 28 5.1 82129 28 5.1 77260 28 6.6 81917 28 6.6 77980 28 6.6 75813 28 6.6 82667 27 8.6 82665 27 8.6 74968 27 8.6 85391 27 8.6 >42015 Length = 157 Score = 167 bits (422), Expect = 7e-42 Identities = 83/158 (52%), Positives = 105/158 (66%), Gaps = 1/158 (0%) Frame = +3 Query: 393 KSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLL 572 KSFYEL D+ G V +YKG+V +A N S+CGLT NY + +L +KY +GL++L Sbjct: 1 KSFYELKDFDMAGNEVSMAKYKGKVVLAVNVSSKCGLTPTNYPELQQLHEKYHAEGLEVL 60 Query: 573 AFPSNSF-GQETGSASEIQSFVDRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFGN 749 AFP N F GQE G+ EI FV +Y VTFP F+K VNG +PVF YLK GS FGN Sbjct: 61 AFPCNQFAGQEPGTHDEILEFVKQYNVTFPFFEKHDVNGATARPVFTYLKTKLPGS-FGN 119 Query: 750 FIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 F+KWNF KFL+D++G+P KRF+PK P E +I LL Sbjct: 120 FVKWNFTKFLVDRNGQPFKRFAPKDLPLSFEEDIKTLL 157 >42013 Length = 165 Score = 165 bits (418), Expect = 2e-41 Identities = 81/160 (50%), Positives = 107/160 (66%), Gaps = 1/160 (0%) Frame = +3 Query: 387 QVKSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQ 566 + K+FYEL D++ K V EEYKG+V + N S+CGLT NY + +L +KY+++GL Sbjct: 6 EAKTFYELKDFDMDKKEVSMEEYKGKVVLVVNVSSKCGLTPTNYPELQQLYEKYQEEGLV 65 Query: 567 LLAFPSNSF-GQETGSASEIQSFVDRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVF 743 +LAFP N F QE G+ EI FV +Y VTFP F+K VNG +PVF YLK GS F Sbjct: 66 VLAFPCNQFKSQEPGTHEEILEFVKQYNVTFPFFEKHDVNGSNARPVFTYLKAKLPGS-F 124 Query: 744 GNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 GNF+KWNF KFL+D++G+P KR++P P E +I ELL Sbjct: 125 GNFVKWNFTKFLVDRNGQPFKRYAPTDLPLSFEEDIKELL 164 >75058 Length = 206 Score = 134 bits (336), Expect = 7e-32 Identities = 75/171 (43%), Positives = 103/171 (60%), Gaps = 3/171 (1%) Frame = +3 Query: 369 GEFDPNQVKSFYELSAVDLNGKLVPFEEYKG-RVCVAFNAGSQCGLTDVNYKQFVELDKK 545 G + + SF + + DL G+ V E+ V + N S CG TD NY++ +L +K Sbjct: 15 GACNAAEYTSFLDFTVPDLQGREVSMREFSAFPVILVVNVASDCGYTDKNYRELQDLYEK 74 Query: 546 YRDQGLQLLAFPSNSFG-QETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQPVFKYLK 719 Y D+G +L FP N FG QE G+A EI F ++Y VTFP+F K VNG P+FK+LK Sbjct: 75 YHDEGFTVLGFPCNQFGAQEPGTAEEILKFTREKYHVTFPLFTKVDVNGDNAHPLFKFLK 134 Query: 720 QNASGSVFGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELLQAN 872 + G V N IKWNF KFLI + +P KR+ T+PSEIE +IV+ LQ++ Sbjct: 135 KQLDGFV-TNDIKWNFTKFLI-VNHEPFKRYGTTTSPSEIENDIVQTLQSS 183 >75982 Length = 559 Score = 104 bits (259), Expect = 6e-23 Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 8/204 (3%) Frame = +3 Query: 285 VLSAKSSDEQGEWFGSFTKAGASIQE--PVGEFDPNQVKSFYELSAVDLNGKLVPFEEYK 458 +L +S EQ +W + AGA+ E P S Y L D +GK + + Sbjct: 352 ILVLRSKPEQEQWLLALRDAGAAFLETHPGILSCAASSASLYSLRDTDASGKTFWMSDLR 411 Query: 459 GRVCVAFNAGSQCGLTDVN-YKQFVELDKKYRDQGLQLLAFPSNSFGQ-ETGSASEIQSF 632 G V + N S G +V + + VEL KY + L+++AFPS FG E + E+ + Sbjct: 412 GHVALLTNVPSDSGANNVEQFTELVELVAKYESE-LKVVAFPSAQFGDAEFSNDEELGAH 470 Query: 633 VDR-YGVTFPVFQKAPVNGPQTQPVFKYLKQNASG---SVFGNFIKWNFQKFLIDQDGKP 800 + + +GV+FPV VNGP + + K +G S +FI+ NF KFL+ +DG+P Sbjct: 471 LQQTFGVSFPVLATRDVNGPNAREALLFCKTQLTGATESAANSFIEDNFVKFLVGRDGRP 530 Query: 801 IKRFSPKTTPSEIEAEIVELLQAN 872 +KR+ P PS +E +I LL+AN Sbjct: 531 VKRYGPYAMPSSLETDIQRLLKAN 554 >39250 Length = 142 Score = 79.0 bits (193), Expect = 2e-15 Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 4/142 (2%) Frame = +3 Query: 450 EYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLLAFPSNSF-GQETGSASEIQ 626 +++ + + N S+C + KQ L + Y D+GL +LA PSN F GQE GS E+ Sbjct: 2 DFRFKAALVVNTASKCSHS-AQLKQLQTLHETYSDRGLVVLAVPSNDFAGQEPGSPEEML 60 Query: 627 SFVDRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFGNF-IKWNFQKFLIDQDGKPI 803 + +GVTFPV K V G + P FK + +F + +WNF KFL++ G Sbjct: 61 NRYADFGVTFPVAHKTAVTGDKAHPFFKKIADKGLLMMFCSVGCRWNFDKFLVNHRGDMR 120 Query: 804 KRFSPKTTP--SEIEAEIVELL 863 F T P E+ AEI E+L Sbjct: 121 AVFPNDTEPLEKEVIAEIEEVL 142 >47446 Length = 200 Score = 63.9 bits (154), Expect = 8e-11 Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 34/194 (17%) Frame = +3 Query: 393 KSFYELSAVDLNG-KLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQL 569 KS + S L G K + +Y G+ + N S C T Y Q +L K++ + L + Sbjct: 6 KSAHNFSFRSLTGSKFIRLADYAGKPILIVNVASHCNSTTKAYVQLNDLAKRFPE--LLV 63 Query: 570 LAFPSNSFG-QETGSASEIQSFVD--RYGVTF-PVFQ---KAPVNGPQTQPVFKYLK--- 719 + P N FG QE + EI + R G F P FQ K VNG +F +L+ Sbjct: 64 IGCPCNQFGHQENLNGDEIYQSLRHIRPGKGFEPAFQLTEKVEVNGANAHAIFNFLRITL 123 Query: 720 -----------QNASGSVFGN------------FIKWNFQKFLIDQDGKPIKRFSPKTTP 830 + VF + + WNF+KFLI DG P KR+SPK Sbjct: 124 PYPCDRSLLDEMSTPSGVFSHPMRLIWMPVTRADVSWNFEKFLISPDGTPYKRYSPKLDF 183 Query: 831 SEIEAEIVELLQAN 872 + + +I LL+ + Sbjct: 184 TAMIEDIKFLLKVD 197 >74938 Length = 1625 Score = 39.3 bits (90), Expect = 0.002 Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 5/142 (3%) Frame = -2 Query: 625 WISLAEPVSCPNELDGKAKSCRPWSRYFLSNSTNCL*FTSVKPHCEPALNATQTRPLYSS 446 W S G + S P S++T T+ P E +A+ + SS Sbjct: 347 WTEAPSSASASGTSSGSSSSSTP------SSTTRAPTSTTQAPWTEAPSSASASGT--SS 398 Query: 445 NGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAE--STTGST 272 +S KS LSS T + S +GS +AP + N P +P +S + S+TGS+ Sbjct: 399 GSSSTARKSRGLSSSGSTTGPSTQSSSGSGTDAPVWTNAPTEAPTTSTSGSSTGSSTGSS 458 Query: 271 PT---DPNTNR*SGASSSRTNT 215 T P T+ S S++ +T Sbjct: 459 TTWTQAPTTSASSSGSATGPST 480 Score = 34.7 bits (78), Expect = 0.054 Identities = 38/158 (24%), Positives = 62/158 (39%), Gaps = 8/158 (5%) Frame = -2 Query: 451 SSNGTSFPFK---STALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAE--S 287 SS G+S + +T+ SS T + S +GS +AP + N P +P +S + S Sbjct: 512 SSTGSSTTWTQAPTTSASSSGSATGPSTQSSSGSGTDAPVWTNAPTEAPTTSTSGSSTGS 571 Query: 286 TTGSTPT---DPNTNR*SGASSSRTNTCLAXXXXXXXXXXXXXXXXXXFLSVGFDTTNTG 116 +TGS+ T P T+ + +S S T + TT + Sbjct: 572 STGSSTTWTQAPTTS--ASSSGSATGPSTQSSSGSGTDAPVWTNAPTEAPTTEAPTTESP 629 Query: 115 VFFTEFHNMPCETLT*SSKPPRDSASNTSSTLIMFPSI 2 +T P + + P S S + S+ + PSI Sbjct: 630 TTWTPLTEAPTTEVPATDAPSSISTSTSGSSGNLLPSI 667 Score = 32.7 bits (73), Expect = 0.21 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 8/87 (9%) Frame = -2 Query: 451 SSNGTSFPFK---STALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAE--S 287 SS G+S + +T+ SS T + S +GS +AP + N P +P +S + S Sbjct: 453 SSTGSSTTWTQAPTTSASSSGSATGPSTQSSSGSGTDAPVWTNAPTEAPTTSTSGSSTGS 512 Query: 286 TTGSTPT---DPNTNR*SGASSSRTNT 215 +TGS+ T P T+ S S++ +T Sbjct: 513 STGSSTTWTQAPTTSASSSGSATGPST 539 Score = 31.2 bits (69), Expect = 0.60 Identities = 43/205 (20%), Positives = 69/205 (33%), Gaps = 4/205 (1%) Frame = -2 Query: 625 WISLAEPVSCPNELDGKAKSCRPWSRYFLSNSTNCL*FTSVKPHCEPALNATQTRPLYSS 446 W S G + S P S++T T+ P E +A+ + S Sbjct: 273 WTEAPSSASASGTSSGSSSSSTP------SSTTRAPTSTTQAPWTEAPSSASASGTSSGS 326 Query: 445 NGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPT 266 + +S P +T + ++ W EAP+ + S SS S+T PT Sbjct: 327 SSSSTPSSTTRAPT---------STTQAPWTEAPSSASASGTSSGSSSSSTPSSTTRAPT 377 Query: 265 D----PNTNR*SGASSSRTNTCLAXXXXXXXXXXXXXXXXXXFLSVGFDTTNTGVFFTEF 98 P T S AS+S T++ + ++ +G + Sbjct: 378 STTQAPWTEAPSSASASGTSSGSSSTARKSRGLSSSGSTTGPSTQ---SSSGSGTDAPVW 434 Query: 97 HNMPCETLT*SSKPPRDSASNTSST 23 N P E T S+ +S SST Sbjct: 435 TNAPTEAPTTSTSGSSTGSSTGSST 459 Score = 30.4 bits (67), Expect = 1.0 Identities = 33/141 (23%), Positives = 52/141 (36%), Gaps = 4/141 (2%) Frame = -2 Query: 625 WISLAEPVSCPNELDGKAKSCRPWSRYFLSNSTNCL*FTSVKPHCEPALNATQTRPLYSS 446 W S G + S P S++T T+ P E +A+ + S Sbjct: 199 WTEAPSSASASGTSSGSSSSSTP------SSTTRAPTSTTQAPWTEAPSSASASGTSSGS 252 Query: 445 NGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPT 266 + +S P +T + ++ W EAP+ + S SS S+T PT Sbjct: 253 SSSSTPSSTTRAPT---------STTQAPWTEAPSSASASGTSSGSSSSSTPSSTTRAPT 303 Query: 265 D----PNTNR*SGASSSRTNT 215 P T S AS+S T++ Sbjct: 304 STTQAPWTEAPSSASASGTSS 324 Score = 28.9 bits (63), Expect = 3.0 Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 4/83 (4%) Frame = -2 Query: 451 SSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGST 272 S++GTS S++ S T +++ W EAP+ + S SS S+T Sbjct: 170 SASGTSSGSSSSSTPS--STTRAPTSTTQAPWTEAPSSASASGTSSGSSSSSTPSSTTRA 227 Query: 271 PTD----PNTNR*SGASSSRTNT 215 PT P T S AS+S T++ Sbjct: 228 PTSTTQAPWTEAPSSASASGTSS 250 Score = 27.3 bits (59), Expect = 8.6 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 4/73 (5%) Frame = -2 Query: 421 STALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTD----PNT 254 S++ S+ + T +++ W EAP+ + S SS S+T PT P T Sbjct: 141 SSSSSTPSSTTRAPTSTTQAPWTEAPSSASASGTSSGSSSSSTPSSTTRAPTSTTQAPWT 200 Query: 253 NR*SGASSSRTNT 215 S AS+S T++ Sbjct: 201 EAPSSASASGTSS 213 >79939 Length = 435 Score = 35.0 bits (79), Expect = 0.041 Identities = 25/77 (32%), Positives = 39/77 (50%) Frame = -2 Query: 451 SSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGST 272 SS G+S +S+ SS T S S TGS E P+ + +P + S+TGS+ Sbjct: 249 SSTGSSTTAQSSDSSSSTQTTTAPSTSSTGSSAETPSTGSSSEQTP------STSSTGSS 302 Query: 271 PTDPNTNR*SGASSSRT 221 P++ +G+SS +T Sbjct: 303 AETPSSGSSTGSSSEQT 319 Score = 31.6 bits (70), Expect = 0.46 Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 5/93 (5%) Frame = -2 Query: 478 NATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPC---- 311 ++++ P SS G+S S+ S+ + + S TGS E P+ + +P Sbjct: 288 SSSEQTPSTSSTGSSAETPSSGSSTGSSSEQTPATSGTGSSAETPSTGSSSEQTPATSST 347 Query: 310 -SSEDLAESTTGSTPTDPNTNR*SGASSSRTNT 215 SSE+ S++G T T + + + ++SS +T Sbjct: 348 GSSEEAPASSSGETTTSSSGDETTTSASSDVST 380 >75543 Length = 1451 Score = 33.5 bits (75), Expect = 0.12 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = +1 Query: 280 QSCFLPSPRTSKVNGLVRSRKLEPRSKSQSVSLTRTKSSRS 402 QS FLPS +S V L+ RKL+P S + L T++ R+ Sbjct: 693 QSAFLPSESSSMVQTLISPRKLKPSSNPTTKLLQTTRTDRA 733 >75422 Length = 167 Score = 28.9 bits (63), Expect = 3.0 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -2 Query: 328 PNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRTNT 215 P H P SS A S+T + T P+T S A+SS T T Sbjct: 106 PAHCPSSSSGSATSSTSTATTAPSTTT-SSATSSTTPT 142 >74531 Length = 795 Score = 28.5 bits (62), Expect = 3.9 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = -2 Query: 361 SWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSS 227 S IE P E N++ ++E++ +++ ++ P N GASSS Sbjct: 40 SHIETPTLAPELNNTNSAAENVGSTSSSNSAAPPTPNVGDGASSS 84 >74534 Length = 795 Score = 28.5 bits (62), Expect = 3.9 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = -2 Query: 361 SWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSS 227 S IE P E N++ ++E++ +++ ++ P N GASSS Sbjct: 40 SHIETPTLAPELNNTNSAAENVGSTSSSNSAAPPTPNVGDGASSS 84 >82706 Length = 737 Score = 28.1 bits (61), Expect = 5.1 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +3 Query: 711 YLKQNASGSVFGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 YL A F N KW F++ L Q + + F+P+ T S I + +L+ Sbjct: 427 YLPVLAEFDSFDNTTKWRFREVLSGQLAQLCRTFTPEATFSVINPLVFKLV 477 >82129 Length = 955 Score = 28.1 bits (61), Expect = 5.1 Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 2/101 (1%) Frame = -2 Query: 511 TSVKPHCEPALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGS--NSPTGSWIEAPAF 338 T + + + ++T + P +S S + SS + S S TGS P+ Sbjct: 260 TPAQSSTDASASSTDSTPTQASTAPSTSSTGASASSADTTPAQSSIIGSTTGS---TPSA 316 Query: 337 VNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRTNT 215 + P S S D + S+ G+TPT P T +G++SS +T Sbjct: 317 ESTPAQS---SSDASASSAGTTPTQPPT---TGSTSSTGST 351 Score = 27.3 bits (59), Expect = 8.6 Identities = 51/222 (22%), Positives = 85/222 (38%), Gaps = 1/222 (0%) Frame = -2 Query: 685 PFTGAFWKTGKVTP*RSTNDWISLAEPVSCPNELDGKAKSCRPWSRYFLSNSTNCL*FTS 506 P TG+ TG TP +S++D S P +S + ST+ + Sbjct: 340 PTTGSTSSTGS-TPAQSSSD-------ASAPTTDSTSTQSST-------AGSTSAPDSSP 384 Query: 505 VKPHCEPALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEP 326 K + ++T + P SSN S S A S+ + G +S + A + + Sbjct: 385 TKSSTTGSTSSTGSTPAQSSNAAS---GSYAGSTQAPTSSSGPDSTSTQASTAGSTSSTD 441 Query: 325 NHSPCSSEDLAESTTGSTPTDPNTN-R*SGASSSRTNTCLAXXXXXXXXXXXXXXXXXXF 149 + + SS + S+TGSTP + +T+ S SS T + A Sbjct: 442 STTTQSSTAGSTSSTGSTPVESSTDASASSTDSSLTQSSTAGSTSSTNSTPTQTPVSGSR 501 Query: 148 LSVGFDTTNTGVFFTEFHNMPCETLT*SSKPPRDSASNTSST 23 S G T + + P T++ +S S +++SST Sbjct: 502 SSAG-STVQASASGSSADSTPTPTVSSASASSGASTASSSST 542 >77260 Length = 466 Score = 27.7 bits (60), Expect = 6.6 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Frame = +3 Query: 510 VNYKQFVELDKKYRDQGLQLLAFPSNSFGQETGSASEIQSFVDRYGVTFPV--FQKAPVN 683 +NY E D+ +R G+Q + F F Q + +E S YG P+ Q P++ Sbjct: 130 INYNTRSEEDRCWRKNGMQYVVFYDIVFAQSNETVAEYDS---EYGPMLPMDGGQCTPIS 186 Query: 684 G 686 G Sbjct: 187 G 187 >81917 Length = 1291 Score = 27.7 bits (60), Expect = 6.6 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Frame = +3 Query: 594 GQETGSASEIQSFVDRYG----VTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFG 746 GQ G +Q FV + + ++ PQ+ P+++YL+QN +G Sbjct: 533 GQFPGHTQRMQGFVVGFSGSKVFSLSALSVQTIDVPQSAPLYRYLEQNDFAQAYG 587 >77980 Length = 651 Score = 27.7 bits (60), Expect = 6.6 Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 10/98 (10%) Frame = -2 Query: 376 NSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTN----------R*SGASSS 227 +SP S A + NE S+ ++ ST GS+ P T R S ASSS Sbjct: 254 SSPASSSSTAASAENEDPPQTSSTPSMSTSTAGSSSITPTTTATASGNSDQPRSSMASSS 313 Query: 226 RTNTCLAXXXXXXXXXXXXXXXXXXFLSVGFDTTNTGV 113 T T +A SVG TT++G+ Sbjct: 314 NTPTSMASGEYENSTPTTTSSLSS---SVG-STTSSGI 347 >75813 Length = 338 Score = 27.7 bits (60), Expect = 6.6 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +3 Query: 453 YKGRVCVAFNAGSQCGLT 506 Y+GR C+AF AG C T Sbjct: 22 YEGRPCIAFAAGGSCNAT 39 >82667 Length = 363 Score = 27.3 bits (59), Expect = 8.6 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = +3 Query: 597 QETGSASEIQSFVDRYGVTFPVFQKAPVNGPQTQPVFKY 713 +++G A RYG+T QK GP+ + ++Y Sbjct: 100 EKSGGALTNSEVARRYGITRAAIQKLKAKGPEVRARYRY 138 >82665 Length = 346 Score = 27.3 bits (59), Expect = 8.6 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = +3 Query: 597 QETGSASEIQSFVDRYGVTFPVFQKAPVNGPQTQPVFKY 713 +++G A RYG+T QK GP+ + ++Y Sbjct: 83 EKSGGALTNSEVARRYGITRAAIQKLKAKGPEVRARYRY 121 >74968 Length = 1245 Score = 27.3 bits (59), Expect = 8.6 Identities = 23/72 (31%), Positives = 28/72 (38%) Frame = -2 Query: 475 ATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDL 296 AT P SS +S S SS GS PT + P P+ + SS Sbjct: 817 ATPVVPTSSSRSSSEDTDSAGSSS-------GSLEPTSTPTSPPPVTEMPSSNSGSSSAP 869 Query: 295 AESTTGSTPTDP 260 ST S+PT P Sbjct: 870 PTSTPTSSPTSP 881 >85391 Length = 393 Score = 27.3 bits (59), Expect = 8.6 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = -2 Query: 499 PHCEPALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGS 377 P EPA+ + PLY S GT +P + L+ D + G+ Sbjct: 253 PLNEPAMRISDRTPLYPSIGTLYPDATAILAEAGDESALGA 293 Database: /home/amadoui/banque/phyto_ramorum Posted date: Mar 30, 2007 3:39 PM Number of letters in database: 7,352,630 Number of sequences in database: 16,066 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,933,787 Number of Sequences: 16066 Number of extensions: 245233 Number of successful extensions: 942 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 844 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 922 length of database: 7,352,630 effective HSP length: 96 effective length of database: 5,810,294 effective search space used: 1313126444 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)