BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NX0AMYA3YC22CM1.SCF (idq=208218) (967 letters) Database: /home/amadoui/banque/phyto_ramorum 16,066 sequences; 7,352,630 total letters Searching.................................done Score E Sequences producing significant alignments: (bits) Value 38640 350 3e-97 73140 120 6e-28 77036 114 5e-26 73141 104 4e-23 86067 87 9e-18 51170 82 3e-16 85461 35 0.041 85749 32 0.45 76008 30 1.0 76009 30 1.0 73473 29 2.3 82934 28 5.0 74122 28 6.6 73533 28 6.6 75735 28 6.6 80483 27 8.6 81699 27 8.6 86306 27 8.6 78768 27 8.6 >38640 Length = 254 Score = 350 bits (899), Expect = 3e-97 Identities = 166/241 (68%), Positives = 191/241 (79%), Gaps = 3/241 (1%) Frame = +2 Query: 203 DKDSSLAPTFVRLAWHSSGTY-KKADGSGGSQGGTIRFDPEINHGGNHGLVIVIEKLEAV 379 D+D+ + PT VRLAWHSSG+Y K+ GSGGS GGTIR DPEINHGGN GL + ++ LE V Sbjct: 2 DEDNYMGPTMVRLAWHSSGSYSKERGGSGGSTGGTIRLDPEINHGGNAGLHLAVKALEKV 61 Query: 380 KAKHPNITYADLYVYAGVVAISEMGGPEVPFHLGRKDAKSGKE--STPDDRLPDADKGSK 553 K HP I+YADLY+ AGV I EMGGPE+PF LGR DAKSGKE TPDDRLP+AD G+K Sbjct: 62 KKNHPEISYADLYILAGVTMIEEMGGPEIPFRLGRPDAKSGKEPTQTPDDRLPNADMGTK 121 Query: 554 PKTIGHIRDVFYRMGFNDREIVALVGAHAVGRCYPTRSGYSGPWTRAETTFSNEYFRELI 733 KT H+RDVFYRMGF+DR+IVALVGAHA+GRCYPTRSGYSGPWT AE TFSNE+FREL+ Sbjct: 122 DKTTQHVRDVFYRMGFDDRDIVALVGAHAIGRCYPTRSGYSGPWTNAEWTFSNEFFRELL 181 Query: 734 ENKWTIKKWDGPEQYEDPTGXXXXXXXXXXXXWDSSFKKYVKLYAKDEEVWPKDFAHAFP 913 ENKWT+KKW+GP QYEDPTG D FKKYV+LYAKDE++W KDF+ AF Sbjct: 182 ENKWTVKKWNGPMQYEDPTGKLMMLPADLVLIQDPQFKKYVELYAKDEDLWFKDFSKAFV 241 Query: 914 K 916 K Sbjct: 242 K 242 >73140 Length = 687 Score = 120 bits (302), Expect = 6e-28 Identities = 99/336 (29%), Positives = 145/336 (43%), Gaps = 82/336 (24%) Frame = +2 Query: 155 NAVDLAKVRADIVDLIDKDSSLAPT--------FVRLAWHSSGTYKKADGSGGSQGGTIR 310 + +D A V+ D++ L+ P F+RLAWH +G+Y++ADG GG GG IR Sbjct: 52 DVIDYALVKEDLLHLMTDSQDFWPADFGHYGGLFIRLAWHCNGSYRRADGRGGCDGGRIR 111 Query: 311 FDPEINHGGNHGLVIVIEKLEAVKAKHPN-ITYADLYVYAGVVAISEMGGPEVPFHLGRK 487 F+PE + N L ++ LE +K K+ + +++ DL V +G VAI MGGP + F GR+ Sbjct: 112 FNPERSWADNTNLDKALDLLEPIKLKYGDALSWGDLIVLSGDVAIESMGGPVLGFCGGRR 171 Query: 488 DAKSGKES-----TPDDR--LPDADKGS-----KPKTIG--------------------H 571 D G S TP+ P A G P T+G Sbjct: 172 DDADGTSSLQLGPTPEQESVAPCAVDGQCKEPLGPTTMGLIYVNPEGPMGVPDPALSVHD 231 Query: 572 IRDVFYRMGFNDREIVALV-GAHAVGRCY----------PTR------------------ 664 +RD F RMG NDRE VAL+ G HA G+ + PT+ Sbjct: 232 VRDTFERMGMNDRETVALIGGGHAFGKTHGACPTGPGPDPTQDPLSPWPGTCGEGAMKGK 291 Query: 665 ------SGYSGPWTRAETTFSNEYFRELIENKWTIKKWDGP------EQYEDPTGXXXXX 808 SG+ G W+ T + N YF+ L +W +K+DGP D T Sbjct: 292 GNNTFTSGFEGAWSFTPTQWGNGYFKGLTGLEW--EKFDGPGGHVQWRPVPDTTPPVRML 349 Query: 809 XXXXXXXWDSSFKKYVKLYAKDEEVWPKDFAHAFPK 916 D+S+ +A + ++F+HA+ K Sbjct: 350 TADIALLHDASYHNISLEFASNLTALNEEFSHAWYK 385 Score = 99.0 bits (245), Expect = 2e-21 Identities = 82/264 (31%), Positives = 119/264 (45%), Gaps = 13/264 (4%) Frame = +2 Query: 164 DLAKVRADIVDLIDK-------DSSLAPT------FVRLAWHSSGTYKKADGSGGSQGGT 304 D VR+DI L+ K DSS T FV AW + T++ D +GG G Sbjct: 421 DFDAVRSDIRSLLTKSVDGLTSDSSSDGTPYNGALFVHAAWQCASTFRITDYAGGCNGAK 480 Query: 305 IRFDPEINHGGNHGLVIVIEKLEAVKAKHPNITYADLYVYAGVVAISEMGGPEVPFHLGR 484 IRF P+ + N G+ +I LE VK +P ++ ADL V AG VA+ + G + F GR Sbjct: 481 IRFSPQKDWPVNAGVDKIISALEPVKESYPTLSTADLIVLAGQVALEDAGNVTIDFLGGR 540 Query: 485 KDAKSGKESTPDDRLPDADKGSKPKTIGHIRDVFYRMGFNDREIVALVGAHAVGRCYPTR 664 DA++G D+ L A + T+ +RD +G + E VAL G Sbjct: 541 TDAENG---NGDEIL--APREYYNTTLIAVRDNIRILGVSPYEAVALAGRPRSVE-QQKA 594 Query: 665 SGYSGPWTRAETTFSNEYFRELIENKWTIKKWDGPEQYEDPTGXXXXXXXXXXXXWDSSF 844 GYSG ++ T SNEYF+ L+ WT +Y+ Sbjct: 595 LGYSGSYSNNSLTLSNEYFQVLLNETWTEV---SAAEYQAEGKNVFMLDTDLALLAAPEL 651 Query: 845 KKYVKLYAKDEEVWPKDFAHAFPK 916 K+ V+L+A +E V+ F+ A+ K Sbjct: 652 KEAVQLFASEENVFKAVFSSAWAK 675 >77036 Length = 686 Score = 114 bits (285), Expect = 5e-26 Identities = 98/336 (29%), Positives = 137/336 (40%), Gaps = 82/336 (24%) Frame = +2 Query: 155 NAVDLAKVRADIVDLIDKDSSLAPT--------FVRLAWHSSGTYKKADGSGGSQGGTIR 310 + +D V+ D+ L+ P F+RLAWH +G+Y++ADG GG GG IR Sbjct: 52 DVIDYDLVKKDLEALMTNSQDFWPADFGHYGGLFIRLAWHCNGSYRRADGRGGCDGGRIR 111 Query: 311 FDPEINHGGNHGLVIVIEKLEAVKAKHPN-ITYADLYVYAGVVAISEMGGPEVPFHLGRK 487 F+PE + N L ++ L +K K+ + +++ DL V +G VAI MGGP + F GR+ Sbjct: 112 FNPEHSWADNTNLDKALKLLNPIKEKYGDALSWGDLVVLSGDVAIKSMGGPVLGFCGGRR 171 Query: 488 DAKSGKES-----TPDDR--LPDADKGS-----KPKTIG--------------------H 571 D G S TP+ P A G P T+G Sbjct: 172 DDADGTSSLQLGPTPEQEAVAPCAVDGQCKEPLGPTTMGLIYVNPEGPMGVPDPALSVLD 231 Query: 572 IRDVFYRMGFNDREIVALV-GAHAVGRCY---PT-------------------------- 661 +RD F RMG NDRE VAL+ G HA G+ + PT Sbjct: 232 VRDTFKRMGMNDRETVALIGGGHAFGKTHGACPTGPGPSPLEDPENPWPGTCGEGEMKGK 291 Query: 662 -----RSGYSGPWTRAETTFSNEYFRELIENKWTIKKWDGP------EQYEDPTGXXXXX 808 SG+ G WT T + N YF+ L W +K+DGP D Sbjct: 292 GNNTFTSGFEGSWTFTPTKWGNGYFKGLTTLDW--EKFDGPGGHVQWRPVPDTNPPVRML 349 Query: 809 XXXXXXXWDSSFKKYVKLYAKDEEVWPKDFAHAFPK 916 D S+ +A D+ F+HA+ K Sbjct: 350 TADIALLHDPSYHSISLEFAADQAALDDAFSHAWYK 385 Score = 89.0 bits (219), Expect = 2e-18 Identities = 74/257 (28%), Positives = 117/257 (45%), Gaps = 6/257 (2%) Frame = +2 Query: 164 DLAKVRADIVDLIDKDSSLAPT------FVRLAWHSSGTYKKADGSGGSQGGTIRFDPEI 325 D+ K+ V+ + DSS T FV A+ + T++ D +GG G IRF P+ Sbjct: 428 DIRKLLKKSVEGLTSDSSADGTPYNGALFVHAAYQCASTFRITDYAGGCNGAKIRFSPQK 487 Query: 326 NHGGNHGLVIVIEKLEAVKAKHPNITYADLYVYAGVVAISEMGGPEVPFHLGRKDAKSGK 505 + N G+ +I LE +K +P+++ ADL V AG VA+ E G + F GR DA++G+ Sbjct: 488 DWPVNAGVDSIITALEPIKKSYPSLSTADLLVLAGQVALQE-AGVKTKFLGGRTDAENGE 546 Query: 506 ESTPDDRLPDADKGSKPKTIGHIRDVFYRMGFNDREIVALVGAHAVGRCYPTRSGYSGPW 685 DD L A + T ++D +G + +E VAL G GYSG + Sbjct: 547 ---GDDIL--APREYYNTTAIAVQDNIKILGVSGQEAVALAG-RPRSVAQQKALGYSGSY 600 Query: 686 TRAETTFSNEYFRELIENKWTIKKWDGPEQYEDPTGXXXXXXXXXXXXWDSSFKKYVKLY 865 + +N+YF L+ WT ++Y+ KK V+L+ Sbjct: 601 SNCSEALTNDYFNVLLNETWTPV---SAKEYKAEGKDLFMLDTDLALLEVPELKKAVELF 657 Query: 866 AKDEEVWPKDFAHAFPK 916 A + + + FA A+ K Sbjct: 658 ASSDHAFKQVFASAWAK 674 >73141 Length = 438 Score = 104 bits (260), Expect = 4e-23 Identities = 71/200 (35%), Positives = 99/200 (49%), Gaps = 41/200 (20%) Frame = +2 Query: 155 NAVDLAKVRADIVDLIDKDSSLAPT--------FVRLAWHSSGTYKKADGSGGSQGGTIR 310 + +D A V+ D++ L+ P F+RLAWH +G+Y++ADG GG GG IR Sbjct: 52 DVIDYALVKEDLLHLMTDSQDFWPADFGHYGGLFIRLAWHCNGSYRRADGRGGCDGGRIR 111 Query: 311 FDPEINHGGNHGLVIVIEKLEAVKAKHPN-ITYADLYVYAGVVAISEMGGPEVPFHLGRK 487 F+PE + N L ++ LE +K K+ + +++ DL V +G VAI MGGP + F GR+ Sbjct: 112 FNPERSWADNTNLDKALDLLEPIKLKYGDALSWGDLIVLSGDVAIESMGGPVLGFCGGRR 171 Query: 488 DAKSGKES-----TPDDR--LPDADKGS-----KPKTIG--------------------H 571 D G S TP+ P A G P T+G Sbjct: 172 DDADGTSSLQLGPTPEQESVAPCAVDGQCKEPLGPTTMGLIYVNPEGPMGVPDPALSVHD 231 Query: 572 IRDVFYRMGFNDREIVALVG 631 +RD F RMG NDRE VAL+G Sbjct: 232 VRDTFERMGMNDRETVALIG 251 >86067 Length = 225 Score = 87.0 bits (214), Expect = 9e-18 Identities = 67/221 (30%), Positives = 102/221 (46%) Frame = +2 Query: 254 SGTYKKADGSGGSQGGTIRFDPEINHGGNHGLVIVIEKLEAVKAKHPNITYADLYVYAGV 433 + T++ D +GG G IRF P+ + N G+ +I LE VK +P ++ ADL V AG Sbjct: 2 ASTFRITDYAGGCNGAKIRFSPQKDWPVNAGVDKIISALEPVKESYPTLSTADLIVLAGQ 61 Query: 434 VAISEMGGPEVPFHLGRKDAKSGKESTPDDRLPDADKGSKPKTIGHIRDVFYRMGFNDRE 613 VA+ + G + F GR DA++G D+ L A + T+ +RD +G + E Sbjct: 62 VALEDAGNVTIDFLGGRTDAENG---NGDEIL--APREYYNTTLIAVRDNIRILGVSPYE 116 Query: 614 IVALVGAHAVGRCYPTRSGYSGPWTRAETTFSNEYFRELIENKWTIKKWDGPEQYEDPTG 793 VAL G GYSG ++ T SNEYF+ L+ WT +Y+ Sbjct: 117 AVALAGRPRSVE-QQKALGYSGSYSNNSLTLSNEYFQVLLNETWTEV---SAAEYQAEGK 172 Query: 794 XXXXXXXXXXXXWDSSFKKYVKLYAKDEEVWPKDFAHAFPK 916 K+ V+L+A +E V+ F+ A+ K Sbjct: 173 NVFMLDTDLALLAAPELKEAVQLFASEENVFKAVFSSAWAK 213 >51170 Length = 124 Score = 82.0 bits (201), Expect = 3e-16 Identities = 45/121 (37%), Positives = 68/121 (56%), Gaps = 9/121 (7%) Frame = +2 Query: 155 NAVDLAKVRADIVDLIDKDSSLAPT--------FVRLAWHSSGTYKKADGSGGSQGGTIR 310 + +D V+ D+ L+ P F+RLAWH +G+Y++ADG GG GG IR Sbjct: 4 DVIDYDLVKKDLEALMTNSQDFWPADFGHYGGLFIRLAWHCNGSYRRADGRGGCDGGRIR 63 Query: 311 FDPEINHGGNHGLVIVIEKLEAVKAKHPN-ITYADLYVYAGVVAISEMGGPEVPFHLGRK 487 F+PE + N L ++ L +K K+ + +++ DL V +G VAI MGGP + F GR+ Sbjct: 64 FNPEHSWADNTNLDKALKLLNPIKEKYGDALSWGDLVVLSGDVAIKSMGGPVLGFCGGRR 123 Query: 488 D 490 D Sbjct: 124 D 124 >85461 Length = 350 Score = 35.0 bits (79), Expect = 0.041 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Frame = -3 Query: 125 PPWQKGTRRKSPQQ-TISSCG*SSKPMYNCGQELEEQFDGRW 3 P W+K R S QQ T+SS + Y C Q LE++F RW Sbjct: 303 PEWKKEEARSSEQQMTLSSFNHEHQVHYKCVQALEDKFQRRW 344 >85749 Length = 1425 Score = 31.6 bits (70), Expect = 0.45 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = -3 Query: 344 HGCHRD*FQGRSGWSHLEIHRCHLLSCMYQTSATPNERTLGQASCLCQSSQRYRR 180 HG + + +SG +L + CH L C+ T E LG+++ L Q +RR Sbjct: 530 HGSYSEMSLYKSGAHYLRANICHFLFCVEMLEPTDVEPELGESALLDQLHDLHRR 584 >76008 Length = 422 Score = 30.4 bits (67), Expect = 1.0 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -2 Query: 912 GNAWAKSLGHTSSSLAYNLTYFLKDESHKRAMSAGSIIKSPVGSSY 775 GN +SL + S YNLT DES K ++ GS S G+SY Sbjct: 68 GNVATRSLAFSGSCGDYNLTQ--SDESFKASIVGGSCAASANGASY 111 >76009 Length = 422 Score = 30.4 bits (67), Expect = 1.0 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -2 Query: 912 GNAWAKSLGHTSSSLAYNLTYFLKDESHKRAMSAGSIIKSPVGSSY 775 GN +SL + S YNLT DES K ++ GS S G+SY Sbjct: 68 GNVATRSLAFSGSCGDYNLTQ--SDESFKASIVGGSCAASANGASY 111 >73473 Length = 651 Score = 29.3 bits (64), Expect = 2.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -1 Query: 955 MSVKNLEPVFRWSFWKCVGEILGPYFFI 872 MS++ +E +F F+ CVG IL P F I Sbjct: 464 MSIRVMENLFGSMFFACVGMILNPMFLI 491 >82934 Length = 749 Score = 28.1 bits (61), Expect = 5.0 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%) Frame = +3 Query: 867 LRMKKYGPRISPTHFQKLHRKTGSKF---LTDIIPI 965 L M +Y P + TH Q+L R G F TD++PI Sbjct: 222 LAMTEYRPNVHDTHEQQLRRFIGDHFDPPGTDLLPI 257 >74122 Length = 903 Score = 27.7 bits (60), Expect = 6.6 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +2 Query: 833 DSSFKKYVKLYAKDEEVWPKDFAHAFPKAPPKNRLQVFDRHHPH 964 D S K++ K Y PK++ +PK K L +++ HP+ Sbjct: 784 DFSPKEHAKAYP------PKEYVKGYPKEYAKEYLHEYEKEHPY 821 >73533 Length = 773 Score = 27.7 bits (60), Expect = 6.6 Identities = 19/61 (31%), Positives = 26/61 (42%) Frame = +3 Query: 3 PPSVKLLLELLPAIVHRLRTSTARRNRLLWRFPPRSFLPRRHPRPSSTRKRMQSTWPKFA 182 PP +L+E +PA + +S A R PP S P PSS M ++A Sbjct: 70 PPVTSVLMEDMPATASKHYSSRAPPPSTRTRPPPSSKYTGMPPPPSSRYAGMPPPSSRYA 129 Query: 183 P 185 P Sbjct: 130 P 130 >75735 Length = 416 Score = 27.7 bits (60), Expect = 6.6 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%) Frame = -1 Query: 421 DVQVSVGNVGVLCLDSFEFFNHNDQTMVATVIDFRVEADG-PTLRSTAAICFLVCTRRVP 245 D +V V G +C D E HN QT + V + ADG P ++ A+ LVC + Sbjct: 221 DTEVCVCECGEICFDEEELRTHN-QTEHSKVEVTKGIADGTPEQPTSPALVCLVCDQTFS 279 Query: 244 RQ 239 R+ Sbjct: 280 RK 281 >80483 Length = 418 Score = 27.3 bits (59), Expect = 8.6 Identities = 12/48 (25%), Positives = 23/48 (47%) Frame = +3 Query: 462 KFHSTWAAKMLRAARSPPQMTVCQMPTRAPSPRPSATFATCFTAWDST 605 K W ++RAAR + ++ ++ + PS FA C ++S+ Sbjct: 74 KMQHAWGRVLVRAARRSATLQSARVASQLRAAAPSHAFARCAVRFESS 121 >81699 Length = 945 Score = 27.3 bits (59), Expect = 8.6 Identities = 10/28 (35%), Positives = 18/28 (64%) Frame = +1 Query: 223 PNVRSFGVALVWYIQESRWQRWISRWDH 306 PN+ +G AL YI++ +W+ + +DH Sbjct: 500 PNLYVYGEALFAYIRQDQWRHALMLFDH 527 >86306 Length = 416 Score = 27.3 bits (59), Expect = 8.6 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +1 Query: 607 PRNCSARWCSCCRSLLPNAQRLQW 678 PR+C +W C + PN+ W Sbjct: 264 PRSCPEKWARCVKGNEPNSHEKNW 287 >78768 Length = 416 Score = 27.3 bits (59), Expect = 8.6 Identities = 8/24 (33%), Positives = 12/24 (50%) Frame = +1 Query: 607 PRNCSARWCSCCRSLLPNAQRLQW 678 PR+C +W C + PN+ W Sbjct: 264 PRSCPEKWARCVKGNEPNSHEKNW 287 Database: /home/amadoui/banque/phyto_ramorum Posted date: Mar 30, 2007 3:39 PM Number of letters in database: 7,352,630 Number of sequences in database: 16,066 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,737,668 Number of Sequences: 16066 Number of extensions: 307003 Number of successful extensions: 1148 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 1046 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1128 length of database: 7,352,630 effective HSP length: 96 effective length of database: 5,810,294 effective search space used: 1307316150 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)