BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NX0AMYA7YC17CM1.SCF (idq=218988) (968 letters) Database: banque/fusarium 15,707 sequences; 7,530,674 total letters Searching................................done Score E Sequences producing significant alignments: (bits) Value jgi|Necha2|73875|fgenesh1_kg.sca_6_chr9_2_0000039 120 8e-28 jgi|Necha2|83215|fgenesh1_pg.sca_22_chr7_11_0000252 31 0.62 jgi|Necha2|21098|gw1.20.1064.1 30 1.8 jgi|Necha2|94095|fgenesh1_pm.sca_37_chr6_2_0000014 29 2.4 jgi|Necha2|102396|estExt_fgenesh1_kg.C_sca_1_chr1_3_00081 28 4.0 jgi|Necha2|56739|e_gw1.177.3.1 28 5.2 jgi|Necha2|82537|fgenesh1_pg.sca_9_chr7_10_0000061 28 5.2 jgi|Necha2|103678|estExt_fgenesh1_pm.C_sca_2_chr3_3_00119 28 5.2 jgi|Necha2|72858|estExt_Genewise1Plus.C_sca_41_chr12_2_00077 28 6.8 jgi|Necha2|84492|fgenesh1_pg.sca_27_chr9_1_0000186 28 6.8 jgi|Necha2|77516|fgenesh1_pg.sca_2_chr3_3_0000238 27 8.9 jgi|Necha2|83877|fgenesh1_pg.sca_10_chr8_2_0000317 27 8.9 >jgi|Necha2|73875|fgenesh1_kg.sca_6_chr9_2_0000039 Length = 171 Score = 120 bits (301), Expect = 8e-28 Identities = 67/161 (41%), Positives = 96/161 (59%), Gaps = 5/161 (3%) Frame = +3 Query: 396 SFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLT---DVNYKQFVELDKKYRDQGLQ 566 SFY+ +D G+ VP +YKG+V + N S+CG T + K + +L +K+ D + Sbjct: 6 SFYDFKPLDKRGQEVPLADYKGKVVLIVNTASKCGFTPQYEGLEKLWTDLKQKHPDDFV- 64 Query: 567 LLAFPSNSFG-QETGSASEIQSFVD-RYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSV 740 +L FP N FG QE GS EIQSF YGV+FP+ QK VNG T P++ +LK+ G + Sbjct: 65 ILGFPCNQFGGQEPGSDEEIQSFCQINYGVSFPIMQKTEVNGDGTNPLWAWLKEQQPGLL 124 Query: 741 FGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 +KWNF+KFL+ +DGK R++ T P +E I+E L Sbjct: 125 GLKRVKWNFEKFLVGRDGKVKGRWASTTKPESLEKPILEAL 165 >jgi|Necha2|83215|fgenesh1_pg.sca_22_chr7_11_0000252 Length = 1327 Score = 31.2 bits (69), Expect = 0.62 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%) Frame = +1 Query: 532 NWTRSTVTKVCNSWLSH--PTRLDKKLARLVKSN 627 +WT ++ VC +WL+ PT DK + R+++ N Sbjct: 831 HWTNLSLAAVCKAWLNSPLPTNFDKTVFRMMREN 864 >jgi|Necha2|21098|gw1.20.1064.1 Length = 812 Score = 29.6 bits (65), Expect = 1.8 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Frame = -2 Query: 499 PHCEPA-LNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPN 323 PH A AT+ SS+ T+ P + A+S + + S++ TGS APA + Sbjct: 437 PHVRRAEYPATEDATSSSSSSTASPSATPAISPTSPSSISSSSASTGSNSTAPATSAKAA 496 Query: 322 HSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRTN 218 + +S + ST+ + P+ NT +++ T+ Sbjct: 497 STSSTSTSSSASTSIAKPSPANTANPKNRTTATTS 531 >jgi|Necha2|94095|fgenesh1_pm.sca_37_chr6_2_0000014 Length = 313 Score = 29.3 bits (64), Expect = 2.4 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = +3 Query: 603 TGSASEIQSFVDRYGVTFPVFQKAPVNGPQTQPVFKYLKQ 722 T + + Q + YG F +Q+ P N Q QPVF +Q Sbjct: 36 TQTQTGFQLYPGSYGQVFTPYQQQPANNGQQQPVFMNQQQ 75 >jgi|Necha2|102396|estExt_fgenesh1_kg.C_sca_1_chr1_3_00081 Length = 241 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 6/62 (9%) Frame = -2 Query: 595 PNELDGKAKSCRPWSRYFLSN------STNCL*FTSVKPHCEPALNATQTRPLYSSNGTS 434 P++ A S PW FL N T L + ++KP EP ++A + ++ Sbjct: 12 PSKAPRAAWSLNPWKTRFLLNFKGIDYKTEWLEYPNIKPTLEPHVSANEATGTWTIPTVK 71 Query: 433 FP 428 FP Sbjct: 72 FP 73 >jgi|Necha2|56739|e_gw1.177.3.1 Length = 1018 Score = 28.1 bits (61), Expect = 5.2 Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 1/135 (0%) Frame = +3 Query: 441 PFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLLAFPSNSFGQETGSASE 620 P EY VC + +G G + +Y FVE + R+ G+ + +++ + Sbjct: 193 PENEYS--VCATYTSGDVNGCLEKDYMAFVE--SQLRNAGITVPFISNDAVPLGNWAPGS 248 Query: 621 IQSFVDRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFGNFIKWNFQKFLIDQDGKP 800 Q VD YG F F + G N W +L+DQ Sbjct: 249 GQGAVDIYGTDFYPF--------------------SWGVGCNNPSNWTRGYWLLDQFNVS 288 Query: 801 I-KRFSPKTTPSEIE 842 + +FSP T S +E Sbjct: 289 VHNKFSPSTPFSMVE 303 >jgi|Necha2|82537|fgenesh1_pg.sca_9_chr7_10_0000061 Length = 599 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = +3 Query: 288 LSAKSSDEQGEWFGSFTKAGASI 356 ++ K S+E+GEW+ S T GA++ Sbjct: 220 MTLKESEERGEWYSSTTYNGAAV 242 >jgi|Necha2|103678|estExt_fgenesh1_pm.C_sca_2_chr3_3_00119 Length = 602 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -2 Query: 382 GSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SG 239 GSNSP ++ +N NHS +D A ++ TP DP ++ +G Sbjct: 216 GSNSP---YLSRKGSLNSSNHSVHHPDDHAATSRPITPVDPVSSAQAG 260 >jgi|Necha2|72858|estExt_Genewise1Plus.C_sca_41_chr12_2_00077 Length = 2520 Score = 27.7 bits (60), Expect = 6.8 Identities = 13/45 (28%), Positives = 24/45 (53%) Frame = +1 Query: 517 TSNLLNWTRSTVTKVCNSWLSHPTRLDKKLARLVKSNRLLTAMES 651 T + +WT +T K+ +W H D+ L +V ++ + T +ES Sbjct: 2214 TMSYEDWTTTTAPKIQGAWNLHKCLKDQDLDFMVMASSINTIVES 2258 >jgi|Necha2|84492|fgenesh1_pg.sca_27_chr9_1_0000186 Length = 710 Score = 27.7 bits (60), Expect = 6.8 Identities = 31/162 (19%), Positives = 57/162 (35%) Frame = -2 Query: 508 SVKPHCEPALNATQTRPLYSSNGTSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNE 329 S E A ++T+T + + +S +++ + T S + T + + + Sbjct: 251 SASSSTETASSSTETASSSTESASSSTETASSSTESASSTESASTTATATATSSTESASS 310 Query: 328 PNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRTNTCLAXXXXXXXXXXXXXXXXXXF 149 + SS + A STTG+T + + +SS +T Sbjct: 311 STETASSSTETA-STTGTTTASTESTIGTTTASSTESTTGTTTASSTESTTASSTESTTG 369 Query: 148 LSVGFDTTNTGVFFTEFHNMPCETLT*SSKPPRDSASNTSST 23 + T +T TE T +S +AS+T ST Sbjct: 370 TTTASSTESTTASSTESTTASSTESTTASSTESTTASSTEST 411 Score = 27.3 bits (59), Expect = 8.9 Identities = 21/112 (18%), Positives = 38/112 (33%) Frame = -2 Query: 439 TSFPFKSTALSS*NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDP 260 T+ +ST SS T + S T S E+ + + ++ ESTTG+T Sbjct: 380 TASSTESTTASSTESTTASSTESTTASSTESTTGTTTASSTESTTASSTESTTGTTTASS 439 Query: 259 NTNR*SGASSSRTNTCLAXXXXXXXXXXXXXXXXXXFLSVGFDTTNTGVFFT 104 + + ++ S T + + T+ +FT Sbjct: 440 TESTTASSTESTTASSTESTTMSTTFSSSTIGTTSTTAAPSTTTSEACTYFT 491 >jgi|Necha2|77516|fgenesh1_pg.sca_2_chr3_3_0000238 Length = 221 Score = 27.3 bits (59), Expect = 8.9 Identities = 18/55 (32%), Positives = 23/55 (41%) Frame = -1 Query: 380 VKLTDWLLDRGSSFRERTKPFTLLVRGLGRKHDWFNTYRSQYESVIRSIFFTHKH 216 VK+ D + G S RE T+P L+ F ES S+FF H H Sbjct: 5 VKILDGAMTFGKSHREVTEPLIKLLTVAK-----FEPISCPSESTFASVFFLHPH 54 >jgi|Necha2|83877|fgenesh1_pg.sca_10_chr8_2_0000317 Length = 1096 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -2 Query: 346 PAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRTNTCLA 206 P+F HS SS+ LA S T +T T P+ S A+ + T A Sbjct: 105 PSFGRLGKHSNRSSQALASSKTPATTTTPSATSGSAATGAPAATTQA 151 Database: banque/fusarium Posted date: Mar 29, 2007 4:45 PM Number of letters in database: 7,530,674 Number of sequences in database: 15,707 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,261,906 Number of Sequences: 15707 Number of extensions: 286744 Number of successful extensions: 921 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 871 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 917 length of database: 7,530,674 effective HSP length: 96 effective length of database: 6,022,802 effective search space used: 1361153252 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)