BLASTX 2.2.9 [May-01-2004]
BLASTX 2.2.9 [May-01-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig2455 NX0AMYA23YA08CM1.SCF NX0AMYA26YE07CM1.SCF
NX0AMYA26YB12CM1.SCF
         (933 letters)

Database: banque/fusarium 
           15,707 sequences; 7,530,674 total letters

Searching................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

jgi|Necha2|102906|estExt_fgenesh1_kg.C_sca_15_chr12_5_00004           197   4e-51
jgi|Necha2|71531|estExt_Genewise1Plus.C_sca_27_chr9_1_00287            86   2e-17
jgi|Necha2|8856|gw1.5.370.1                                            40   0.001
jgi|Necha2|51414|e_gw1.30.295.1                                        32   0.26 
jgi|Necha2|94824|fgenesh1_pm.sca_72_chr7_6_0000010                     32   0.45 
jgi|Necha2|98772|estExt_fgenesh1_pg.C_sca_1_chr1_3_00313               30   1.00 
jgi|Necha2|61302|estExt_Genewise1.C_sca_5_chr5_3_00745                 30   1.7  
jgi|Necha2|95471|fgenesh1_pm.sca_10_chr8_2_0000110                     29   2.2  
jgi|Necha2|44944|e_gw1.9.351.1                                         28   5.0  
jgi|Necha2|73986|fgenesh1_pg.sca_8_chr1_1_0000017                      28   5.0  
jgi|Necha2|101762|estExt_fgenesh1_pg.C_sca_43_chr10_1_00075            28   6.5  
jgi|Necha2|91049|fgenesh1_pm.sca_18_chr2_1_0000453                     28   6.5  
jgi|Necha2|103042|estExt_fgenesh1_pm.C_sca_1_chr1_3_00020              27   8.5  
jgi|Necha2|57678|estExt_Genewise1.C_sca_1_chr1_3_01307                 27   8.5  
jgi|Necha2|67804|estExt_Genewise1Plus.C_sca_54_chr3_4_00097            27   8.5  
jgi|Necha2|57922|estExt_Genewise1.C_sca_18_chr2_1_00601                27   8.5  

>jgi|Necha2|102906|estExt_fgenesh1_kg.C_sca_15_chr12_5_00004
          Length = 214

 Score =  197 bits (502), Expect = 4e-51
 Identities = 97/191 (50%), Positives = 132/191 (69%), Gaps = 2/191 (1%)
 Frame = +2

Query: 278 AFIGKPAPAFTAPAVVRG-DIDEISLHDYLGKYVVLFFYPKDFTYVCPTEIIAFNDRAKE 454
           AF+ +PAP FTA  +  G +  +ISL ++ G++VVL FYP DFT+VCPTEII +N+  + 
Sbjct: 4   AFVQRPAPEFTATTLYPGGEFKDISLSEFKGQWVVLLFYPMDFTFVCPTEIIQYNNALER 63

Query: 455 FEALDTQLICASTDTPEVHLAWTRTPRNVGGLGK-MKIPMVADVTKVISAKYGCLGESNG 631
           F A++T ++  STD+   HLAW   PR  GGLG  +++P+VAD +  IS  YG L E  G
Sbjct: 64  FRAINTTVLGVSTDSHFTHLAWVEKPRKQGGLGPDLELPLVADKSHKISRSYGVLIEDEG 123

Query: 632 FPYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEVCPANWQPGDATI 811
              RGL++ID +GIL+  T+N+ PVGR V+E +RLVKAFQF +EHGEVCPA WQ G  T+
Sbjct: 124 VALRGLFIIDPKGILRQITVNDLPVGRDVEETIRLVKAFQFTDEHGEVCPAGWQEGGKTM 183

Query: 812 VDNPVESQKYF 844
             +P  S +YF
Sbjct: 184 KADPKGSLEYF 194


>jgi|Necha2|71531|estExt_Genewise1Plus.C_sca_27_chr9_1_00287
          Length = 226

 Score = 85.9 bits (211), Expect = 2e-17
 Identities = 59/201 (29%), Positives = 99/201 (49%), Gaps = 10/201 (4%)
 Frame = +2

Query: 266 PAPKAFIGKPAPAFTAPAVVRGDIDEISLHDYLG-KYVVLFFYPKDFTYVCPTEIIAFND 442
           PAP   +G  AP F A    +G ID    H+++G  +V+LF +P+D+T VC TE+ A   
Sbjct: 4   PAPLR-LGSIAPNFQAETT-KGKID---FHEFIGDNWVILFSHPEDYTPVCTTELGAMAK 58

Query: 443 RAKEFEALDTQLICASTDTPEVHLAWTRTPRNVGGLGKMKIPMVADVTKVISAKYGCLGE 622
            A EF     + I  S +T E H  W +    V G G ++ P++ D  + +S  Y  + +
Sbjct: 59  LAPEFAKRGVKPIGLSANTIESHEGWIKDISEVTG-GNVEFPIIGDKERKVSLLYDMIDQ 117

Query: 623 SN---------GFPYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEEHGEV 775
            +          F  R +Y ID +  +++        GR+  E LR++ + Q  +++   
Sbjct: 118 QDATNVDEKGIAFTIRSVYFIDPKKTIRTILSYPASTGRNAAEILRIIDSLQTGDKYRIT 177

Query: 776 CPANWQPGDATIVDNPVESQK 838
            P NW PG+  IV   V++++
Sbjct: 178 TPINWVPGEDVIVHPSVKNEE 198


>jgi|Necha2|8856|gw1.5.370.1
          Length = 146

 Score = 40.0 bits (92), Expect = 0.001
 Identities = 29/99 (29%), Positives = 45/99 (45%)
 Frame = +2

Query: 374 VVLFFYPKDFTYVCPTEIIAFNDRAKEFEALDTQLICASTDTPEVHLAWTRTPRNVGGLG 553
           VVLF YPK  T  C  ++  F D  +   A    +   STD+P+ +  +           
Sbjct: 35  VVLFTYPKASTPGCTKQVCFFRDSYEPLTAGGLAIYGLSTDSPKANTTFKDKQ------- 87

Query: 554 KMKIPMVADVTKVISAKYGCLGESNGFPYRGLYVIDREG 670
           K+  P++ D    +    G L +S     RG++VID+EG
Sbjct: 88  KLPYPLLCDPKATLIGAIG-LKKSPKGTQRGVFVIDKEG 125


>jgi|Necha2|51414|e_gw1.30.295.1
          Length = 368

 Score = 32.3 bits (72), Expect = 0.26
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -3

Query: 649 QATVWEAIGFTQAAILGRDHLGHISHHGDLHLAQTTDVAWGAGPGQMHFW 500
           +A  W   G+  AA++GR  L +  +   LHL Q  D  +   PG  H+W
Sbjct: 320 EADEWIQKGYMDAAVIGRPLLYNPDYVEKLHLGQ-ADALYQEQPGDEHWW 368


>jgi|Necha2|94824|fgenesh1_pm.sca_72_chr7_6_0000010
          Length = 494

 Score = 31.6 bits (70), Expect = 0.45
 Identities = 17/59 (28%), Positives = 24/59 (40%)
 Frame = -2

Query: 674 RYLRDQSRTSHGMGSHWIHPSSHTWPRSPWSHQPPWGSSSCPNHRRCVGCGSRPNALLA 498
           R +  Q +      +H + PS    P    +   P GSS    H  C+ CG    AL+A
Sbjct: 224 RKIEHQGKFYKSSSAHQVDPSPQRTPVLFQAGMSPAGSSFAAKHAECIFCGGASPALVA 282


>jgi|Necha2|98772|estExt_fgenesh1_pg.C_sca_1_chr1_3_00313
          Length = 651

 Score = 30.4 bits (67), Expect = 1.00
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 644 HGMGSHWIHPSSHTWPRSPWSHQPPWGSSSCPNHRRCVGCGSRPN 510
           H   +HW+   SH  P  PW  Q P    S P+H      GS P+
Sbjct: 24  HSASNHWMS-HSHNSPSYPWQTQNPSLPQSYPHHPLQPAPGSGPD 67


>jgi|Necha2|61302|estExt_Genewise1.C_sca_5_chr5_3_00745
          Length = 453

 Score = 29.6 bits (65), Expect = 1.7
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
 Frame = +2

Query: 623 SNGFPYRGLYVIDREGILQSYTINNNPVGRSVDEALRLVKAFQFYEE-----------HG 769
           S G  Y   Y  +  GI++   I+ N V ++ DE   L +A + Y +           HG
Sbjct: 291 SGGLMYEYSYEDNDFGIVK---ISGNTV-KTTDEYKLLKEALKNYPQPTGSGGAAKSTHG 346

Query: 770 EVCPAN---WQPGDATIVDNPVESQKYFKN 850
             CPA    WQ     + + P +++KYF N
Sbjct: 347 VDCPAKEDVWQVDPDLVPEMPSQAEKYFTN 376


>jgi|Necha2|95471|fgenesh1_pm.sca_10_chr8_2_0000110
          Length = 605

 Score = 29.3 bits (64), Expect = 2.2
 Identities = 17/44 (38%), Positives = 24/44 (54%)
 Frame = -2

Query: 155 AKQRGELASLVESKIGFEETRAQPQRRQGDEVECARRARRQSGD 24
           AK+  ELA   E K    E +A   RRQ  +VE + + +R+ GD
Sbjct: 357 AKKAAELAQNGEDKASSLEKQADKLRRQLRKVESSIKRKREQGD 400


>jgi|Necha2|44944|e_gw1.9.351.1
          Length = 488

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 10/55 (18%)
 Frame = +2

Query: 638 YRGLYVIDREGILQSY--------TINNNPVGRSVDEALRLVKA--FQFYEEHGE 772
           Y G + +DRE ILQ +        TIN    G+ +   L ++    F+FY  +G+
Sbjct: 104 YGGNWTVDRELILQGFAGVGPLNATINGEGDGQFLQNGLTIINPVDFEFYSSNGK 158


>jgi|Necha2|73986|fgenesh1_pg.sca_8_chr1_1_0000017
          Length = 790

 Score = 28.1 bits (61), Expect = 5.0
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
 Frame = +2

Query: 464 LDTQLICASTDTPEVHLAWTRTPRNVGG---LGKMKIPMVADVTKVISAKYGCL 616
           LD        DT E H +W R   N+     +GK+ +    D+  + SA+ GCL
Sbjct: 108 LDPYRATPDVDTSETHRSWARAEYNIPAETPVGKITVEKSEDL--IESAQRGCL 159


>jgi|Necha2|101762|estExt_fgenesh1_pg.C_sca_43_chr10_1_00075
          Length = 1341

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 675 CKATRSTTTLSVAVSTKLCVWSRLSNSTKNTAKCARPTG 791
           C  T   TT ++AVST +C  +     T       RPTG
Sbjct: 572 CPNTAHVTTETIAVSTTVCPVTESVTETTGFETVTRPTG 610


>jgi|Necha2|91049|fgenesh1_pm.sca_18_chr2_1_0000453
          Length = 1201

 Score = 27.7 bits (60), Expect = 6.5
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -3

Query: 148 KEASLHLWLNQRLALRKRAHSRSGDRATKLSA 53
           +E SL   +N+R  LR+ +HSR+  ++ + SA
Sbjct: 653 REESLRRKINRRTGLRRASHSRTTSQSARASA 684


>jgi|Necha2|103042|estExt_fgenesh1_pm.C_sca_1_chr1_3_00020
          Length = 747

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = -2

Query: 605 TWPRSPWSHQPPWGSSSCPNHRRCVGCGSRPNALLACRSMRKSIACQELR 456
           TWP   W H+  +  SS  N  RC  CG      +A  S R+S   Q+L+
Sbjct: 114 TWPARSWQHR-FYSGSSHGNASRC-SCGKE----IAVSSTRQSKTTQDLQ 157


>jgi|Necha2|57678|estExt_Genewise1.C_sca_1_chr1_3_01307
          Length = 1318

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +2

Query: 398 DFTYVCPTEIIAFNDRAKEFEALDTQLICASTDT 499
           D TY+    I+A  + AK    LD    CA +DT
Sbjct: 807 DCTYLSDNAIVALVNSAKNLTHLDLSFCCALSDT 840


>jgi|Necha2|67804|estExt_Genewise1Plus.C_sca_54_chr3_4_00097
          Length = 588

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = -2

Query: 590 PWSHQPPWGSSSC-PNHRRCVGCGSRPNALLACRSMRK 480
           P  ++  WGS+S   +H++C GC + P+A    + +RK
Sbjct: 260 PGCNRSFWGSNSFNQHHKQCHGCKTCPHAEKVVKFLRK 297


>jgi|Necha2|57922|estExt_Genewise1.C_sca_18_chr2_1_00601
          Length = 599

 Score = 27.3 bits (59), Expect = 8.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -2

Query: 689 SCSFARYLRDQSRTSHGMGSHWIHPSSHTWPRSPWSHQPP 570
           +CS   ++R   R  H + S  +HP   T P  P S  PP
Sbjct: 424 ACSGEFFIR---RLKHPVSSDEVHPKEKTHPNEPVSGGPP 460


  Database: banque/fusarium
    Posted date:  Mar 29, 2007  4:45 PM
  Number of letters in database: 7,530,674
  Number of sequences in database:  15,707
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,579,962
Number of Sequences: 15707
Number of extensions: 293735
Number of successful extensions: 997
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 993
length of database: 7,530,674
effective HSP length: 96
effective length of database: 6,022,802
effective search space used: 1288879628
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)