BLASTX 2.2.9 [May-01-2004]
BLASTX 2.2.9 [May-01-2004]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Contig1967 NX0AMYA15YP09CM1.SCF NX0AMYA16YJ14CM1.SCF
         (978 letters)

Database: banque/fusarium 
           15,707 sequences; 7,530,674 total letters

Searching................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

jgi|Necha2|89932|fgenesh1_pm.sca_1_chr1_3_0000065                     260   5e-70
jgi|Necha2|102077|estExt_fgenesh1_pg.C_sca_41_chr12_2_00004            88   6e-18
jgi|Necha2|52569|e_gw1.39.174.1                                        67   1e-11
jgi|Necha2|55664|e_gw1.21.28.1                                         31   0.63 
jgi|Necha2|96018|fgenesh1_pm.sca_27_chr9_1_0000114                     31   0.82 
jgi|Necha2|43112|e_gw1.20.512.1                                        28   4.1  
jgi|Necha2|50632|e_gw1.14.643.1                                        28   5.3  
jgi|Necha2|83545|fgenesh1_pg.sca_17_chr8_1_0000318                     28   6.9  
jgi|Necha2|70017|estExt_Genewise1Plus.C_sca_20_chr6_4_00130            28   6.9  
jgi|Necha2|56315|e_gw1.117.29.1                                        27   9.1  
jgi|Necha2|50208|e_gw1.82.380.1                                        27   9.1  
jgi|Necha2|33819|e_gw1.18.1517.1                                       27   9.1  

>jgi|Necha2|89932|fgenesh1_pm.sca_1_chr1_3_0000065
          Length = 345

 Score =  260 bits (665), Expect = 5e-70
 Identities = 142/295 (48%), Positives = 181/295 (61%), Gaps = 6/295 (2%)
 Frame = +3

Query: 33  GASMTMLQAKDQPVDLPKIRSEIVS-LIEKDNY----LGPTLVRLAWHSSGTYXXXXXXX 197
           GAS T         D  K+ +EI + L EKD+Y      P L+RLAWH+SGTY       
Sbjct: 56  GASATPKVFNPTKDDYQKVYNEIANRLEEKDDYDDGSYAPVLLRLAWHASGTYDKETGTG 115

Query: 198 XXXXXTIRFDPEINHGANAGLNTAVDKLEAIKERYPNISYADLYVFAGVVAIAEMGGPEV 377
                T+RF PE +HGANAGL  A + LE +K ++P I+Y+DL++  GV AI EM GP +
Sbjct: 116 GSNGATMRFAPESDHGANAGLLAARNFLEPVKAKFPWITYSDLWILGGVCAIQEMQGPVI 175

Query: 378 KFHLGRKDAESGAECTPDGRLPDADKGSKPNTINHVREIFYRMGFNDREIVALIGAHAVG 557
            +  GR D +  A CTPDGRLPDA K S     NH+R+IFYRMGFND+EIVAL GAHA+G
Sbjct: 176 PYRPGRSDRDVSA-CTPDGRLPDATKSS-----NHLRDIFYRMGFNDQEIVALSGAHALG 229

Query: 558 RCYPTRSGYSGPWTRAEWTFSNEYYRELIENKWTLKKWKGPEQYTD-PTGELMMLPADMA 734
           RC+  RSG+ GPWT +    +N+Y+R LIE KW  KKW GP QY D  T  LMMLP DMA
Sbjct: 230 RCHTDRSGFDGPWTFSPTVLTNDYFRLLIEEKWQWKKWNGPAQYEDKSTKTLMMLPTDMA 289

Query: 735 FIWDPEFKKYVELYAKDEELWHKDFAKAFQKLTENGCHLEKNGWRRYFFFGPRGD 899
            + D + K +VE YAKD + + KDF+    +L E G    +    + + F P  D
Sbjct: 290 LVQDKKLKPFVEKYAKDNDAFFKDFSDVVLRLFELGVPFAQGTENQRWTFKPTYD 344


>jgi|Necha2|102077|estExt_fgenesh1_pg.C_sca_41_chr12_2_00004
          Length = 782

 Score = 87.8 bits (216), Expect = 6e-18
 Identities = 95/329 (28%), Positives = 129/329 (39%), Gaps = 94/329 (28%)
 Frame = +3

Query: 126  YLGPTLVRLAWHSSGTYXXXXXXXXXXXXTIRFDPEINHGANAGLNTAVDKLEAIKERYP 305
            + G   +R+AWHS+GTY              RF P  +   N  L+ A   L  IK++Y 
Sbjct: 125  HYGGLFIRMAWHSAGTYRAIDGRGGGGMGQQRFAPLNSWPDNQNLDKARRLLWPIKQKYG 184

Query: 306  N-ISYADLYVFAGVVAIAEMGGPEVKFHLGRKDA----ES---GAECT--PDGR------ 437
            N IS+ADL + AG VA+  M    + F  GR D     ES   GAE T  P G       
Sbjct: 185  NKISWADLILLAGNVALESMDFEPIGFGAGRADTWQSDESVYWGAETTFVPKGNDVRYNG 244

Query: 438  ----LPDADKGSKP-----------------------NTINHVREIFYRMGFNDREIVAL 536
                +  ADK  KP                       ++   +R  F RMG ND E VAL
Sbjct: 245  SKDVVDRADKLEKPLGAVSLGLIYVNPEGPDANSNPADSALDIRVNFDRMGMNDEETVAL 304

Query: 537  I-GAHAVGRCYPTRSGYS-GP----------------------------------WTRAE 608
            I G H  G+ +    G + GP                                  WT+  
Sbjct: 305  IVGGHTFGKTHGAVPGSNIGPEPEAADLGEMGLGWHNKVGEGNGPNQMTSGLEVIWTKTP 364

Query: 609  WTFSNEYYRELIENKWTL-------KKWK---GPEQYTDPTGE-----LMMLPADMAFIW 743
              +SN +   L+ N WTL        +W+   G   Y DP  +       ML +D+A I 
Sbjct: 365  TKWSNGFLTSLLTNNWTLVESPAGAHQWEALNGTVDYPDPFDKTKFRRATMLTSDLALIH 424

Query: 744  DPEFKKYVELYAKDEELWHKDFAKAFQKL 830
            DPE+ K  + + K+ E   K F +A+ KL
Sbjct: 425  DPEYLKICKRWQKNPEELRKAFGRAWFKL 453


>jgi|Necha2|52569|e_gw1.39.174.1
          Length = 741

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 85/340 (25%), Positives = 123/340 (36%), Gaps = 104/340 (30%)
 Frame = +3

Query: 126  YLGPTLVRLAWHSSGTYXXXXXXXXXXXXTIRFDPEINHGANAGLNTAVDKLEAIKERYP 305
            + G   +R++WHS                  RF P  +   N  L+ A   L  IK++Y 
Sbjct: 84   HYGGLFIRMSWHSGQQ---------------RFAPLNSWPDNVSLDKARRLLWPIKQKYG 128

Query: 306  N-ISYADLYVFAGVVAIAEMGGPEVKFHLGRKDAESGAE--------CTPDGRLPDADKG 458
            N IS+ADL V AG VA+ +MG   + F  GR+D    AE           D R  D   G
Sbjct: 129  NKISWADLIVLAGNVALEDMGFKTIGFAGGREDTWEAAEDVYWRTTWLGNDVRYSDGHPG 188

Query: 459  -SKPNTIN------------------------------------------HVREIFYRMG 509
             SK   I+                                           +R+ F RM 
Sbjct: 189  TSKAGAIDSDEAPHKDIHSRKLEEPLGALGLIYVNPEGPDGNPDPVAAARDIRDTFGRMA 248

Query: 510  FNDREIVALI-GAHAVGRCY-----------------------------------PTRSG 581
             ND E VALI G H+ G+ +                                    T SG
Sbjct: 249  MNDEETVALIAGGHSFGKTHGAGSSDHVGPEPEAAGLEAQGLGWSNTYKSGKGPDTTTSG 308

Query: 582  YSGPWTRAEWTFSNEYYRELIENKWTLKK-------WKG-------PEQYTDPTGEL--M 713
                WT+    +SN ++  L + +W L K       W         P+ Y DP  +    
Sbjct: 309  LEVTWTKTPTKWSNNFFEYLFKFEWELTKSPAGAHQWVAKDAPEIIPDAY-DPNKKQRPT 367

Query: 714  MLPADMAFIWDPEFKKYVELYAKDEELWHKDFAKAFQKLT 833
            ML  D++  +DPE++K    +  + + + + FAKA+ KLT
Sbjct: 368  MLTTDLSLRFDPEYEKISRRFLNNFDEFSEVFAKAWFKLT 407


>jgi|Necha2|55664|e_gw1.21.28.1
          Length = 728

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 20/72 (27%), Positives = 32/72 (44%)
 Frame = +3

Query: 270 VDKLEAIKERYPNISYADLYVFAGVVAIAEMGGPEVKFHLGRKDAESGAECTPDGRLPDA 449
           + KL         IS+A +  F G++A++        +HL  KD ESG  C P+G     
Sbjct: 303 LSKLTLFSVDASKISHAKMSNFYGLLAVSA-------YHLSLKDQESGDLCRPEGYWAAV 355

Query: 450 DKGSKPNTINHV 485
            +G+      H+
Sbjct: 356 HEGAYDAAKKHL 367


>jgi|Necha2|96018|fgenesh1_pm.sca_27_chr9_1_0000114
          Length = 695

 Score = 30.8 bits (68), Expect = 0.82
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
 Frame = -3

Query: 559 RPTA--WAPMRATISRSLNPMR*KISRTWLIVFGLLPLSASGKRPSG----VHSAPDSAS 398
           RPT+   +P ++T S  L+P R  +SR       +L  S  G+R S     V  AP+   
Sbjct: 487 RPTSRDLSPSKSTQSSRLDPNRQSVSRHRTAHSMVLSRSQEGRRRSSIVATVRDAPEVPE 546

Query: 397 LRPKWNLTSGPPISAMATTPANTYK 323
           L  + +  S P + A  TT +N  +
Sbjct: 547 LNERRSSQSPPLLLAPPTTTSNALR 571


>jgi|Necha2|43112|e_gw1.20.512.1
          Length = 1067

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 20/87 (22%), Positives = 32/87 (36%), Gaps = 15/87 (17%)
 Frame = +3

Query: 507  GFNDREIVALIGAHAVGRCYPTRSGYSGPWTRAEWTF----------SNEYYRELIEN-- 650
            GFN++ +           C P  S  S  +T   W F             ++ E+ E   
Sbjct: 894  GFNNQGLGHDCNTKYSESCEPVFSARSTAFTTMTWDFLLFAWQLVDSRRSFFAEIFEQGG 953

Query: 651  ---KWTLKKWKGPEQYTDPTGELMMLP 722
                WT++ WK P  +   T   ++LP
Sbjct: 954  SFKAWTMRLWKNPFLFWSVTISTVLLP 980


>jgi|Necha2|50632|e_gw1.14.643.1
          Length = 179

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/74 (20%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = -2

Query: 467 WLASLISIGQATIRSAFSARLGILTAQMELDFRTSHFGNGDNTSEHI--QISVGNVGVAF 294
           W     +I ++ + S + +++   ++  +  + T H G GD+T  H    +  G +    
Sbjct: 61  WKGLTPNIARSVLMSEYVSQIATYSSTKQ--YLTGHLGFGDDTKTHAISSLMAGTMATTL 118

Query: 293 LDRFELVNSRVQTS 252
               +++ SR+Q+S
Sbjct: 119 CAPADVLKSRIQSS 132


>jgi|Necha2|83545|fgenesh1_pg.sca_17_chr8_1_0000318
          Length = 542

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +1

Query: 784 MKNCGTRTSPKLSKSSLKMVATW 852
           +K CG RT    ++S+L+MV TW
Sbjct: 79  LKVCGGRTDSVSARSALEMVTTW 101


>jgi|Necha2|70017|estExt_Genewise1Plus.C_sca_20_chr6_4_00130
          Length = 783

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
 Frame = -2

Query: 650 VFNEFAVVLIGECP-LCAGPXXXXXXXXXXXXTN--GMGTDESND 525
           VFN F   L+G CP +  GP                G G DE ND
Sbjct: 234 VFNPFIYALLGSCPQMVVGPEAAGSLLVGTVVKQNVGSGDDEEND 278


>jgi|Necha2|56315|e_gw1.117.29.1
          Length = 247

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 26  HSGCFHDYVASQGSTRGPPQDSLGNCQLD 112
           H   F+D V  +  T GPP++  G   LD
Sbjct: 29  HDDGFYDVVTPRNVTSGPPEEIAGKTHLD 57


>jgi|Necha2|50208|e_gw1.82.380.1
          Length = 1078

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -2

Query: 536 ESNDFTVVESHAVKNFTDMVDSVWLASLISI 444
           E  D T +   A KN  D+V+  W ASLI +
Sbjct: 810 EDEDATALTKWAGKNAEDLVEDGWAASLIRL 840


>jgi|Necha2|33819|e_gw1.18.1517.1
          Length = 1677

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = +3

Query: 624 EYYRELIENKWTLKKWKGPEQYTDPTGELMMLPADMAFIWDPEFKKYVELYAKDEELWHK 803
           +++RE I     +K W+GP    +P   L +     +F   PE++++ E +  D   WH 
Sbjct: 661 DFFREFITP--IVKVWQGP----NPKKPLRL----KSFFTQPEYEEWKEDHKDDMGRWHS 710

Query: 804 DFAK 815
            + K
Sbjct: 711 KYYK 714


  Database: banque/fusarium
    Posted date:  Mar 29, 2007  4:45 PM
  Number of letters in database: 7,530,674
  Number of sequences in database:  15,707
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,979,789
Number of Sequences: 15707
Number of extensions: 346768
Number of successful extensions: 1083
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1078
length of database: 7,530,674
effective HSP length: 96
effective length of database: 6,022,802
effective search space used: 1379221658
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)