BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Contig1815 NX0AMYA13YF12CM1.SCF NX0AMYA13YJ03CM1.SCF (890 letters) Database: banque/fusarium 15,707 sequences; 7,530,674 total letters Searching................................done Score E Sequences producing significant alignments: (bits) Value jgi|Necha2|73875|fgenesh1_kg.sca_6_chr9_2_0000039 113 8e-27 jgi|Necha2|31067|e_gw1.1.1335.1 30 1.2 jgi|Necha2|93686|fgenesh1_pm.sca_5_chr5_3_0000251 30 1.6 jgi|Necha2|106189|fgeneshN1_pm.sca_20_chr6_4_0000001 29 2.7 jgi|Necha2|79951|fgenesh1_pg.sca_12_chr5_2_0000131 29 2.7 jgi|Necha2|24252|gw1.65.78.1 28 3.5 jgi|Necha2|47187|e_gw1.10.558.1 28 4.6 jgi|Necha2|89043|fgenesh1_pg.sca_88_unmapped000008 28 4.6 jgi|Necha2|92688|fgenesh1_pm.sca_3_chr4_2_0000303 27 7.9 >jgi|Necha2|73875|fgenesh1_kg.sca_6_chr9_2_0000039 Length = 171 Score = 113 bits (282), Expect(2) = 8e-27 Identities = 64/145 (44%), Positives = 90/145 (62%), Gaps = 5/145 (3%) Frame = +1 Query: 169 YRGRVCLVVNVASQ*GLTQLNYTQLAAL--DAKYRN-QGLEILAFPCNQFGGQEPGTNEK 339 Y+G+V L+VN AS+ G T Y L L D K ++ IL FPCNQFGGQEPG++E+ Sbjct: 25 YKGKVVLIVNTASKCGFTP-QYEGLEKLWTDLKQKHPDDFVILGFPCNQFGGQEPGSDEE 83 Query: 340 IMEFVK-TFGITFQFFNKCDVNGDNTVPVFQYLKHHLSGLLG-NFIKWNFTKFLVDREGQ 513 I F + +G++F K +VNGD T P++ +LK GLLG +KWNF KFLV R+G+ Sbjct: 84 IQSFCQINYGVSFPIMQKTEVNGDGTNPLWAWLKEQQPGLLGLKRVKWNFEKFLVGRDGK 143 Query: 514 PFKRYSPQTAPNDFEGDIVELLSKQ 588 R++ T P E I+E L+++ Sbjct: 144 VKGRWASTTKPESLEKPILEALAEE 168 Score = 24.6 bits (52), Expect(2) = 8e-27 Identities = 9/22 (40%), Positives = 14/22 (63%) Frame = +2 Query: 101 AKSFFELSAVDMAGQTVPMSKY 166 A SF++ +D GQ VP++ Y Sbjct: 4 ATSFYDFKPLDKRGQEVPLADY 25 >jgi|Necha2|31067|e_gw1.1.1335.1 Length = 968 Score = 30.0 bits (66), Expect = 1.2 Identities = 20/56 (35%), Positives = 27/56 (48%) Frame = -3 Query: 579 QELDNVAFEVVGGGLGTVSLERLALAIDEELGKVPLDKVAQESREVVLQVLKHWHR 412 QE V +VGG G++ L R ALA + L K DK +++ HWHR Sbjct: 321 QETAPVLDIIVGGARGSIYLYRDALARSQALAKSGSDKEPIQAQNF------HWHR 370 >jgi|Necha2|93686|fgenesh1_pm.sca_5_chr5_3_0000251 Length = 1369 Score = 29.6 bits (65), Expect = 1.6 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +2 Query: 527 TVPRPPPTTSKATLSSSCPNKRPGKNPRRKPSKNSL 634 T P P P A + P P +NPRR +K SL Sbjct: 592 TSPNPSPVNESAKNFTPVPGNVPPRNPRRLTTKRSL 627 >jgi|Necha2|106189|fgeneshN1_pm.sca_20_chr6_4_0000001 Length = 527 Score = 28.9 bits (63), Expect = 2.7 Identities = 16/46 (34%), Positives = 24/46 (52%) Frame = -1 Query: 548 LGAVWGLYRLNGWPSRSTRNLVKFHLIKLPRSPERWCFRY*NTGTV 411 +G + ++ L WPS S +LV F L+ +PE RY + TV Sbjct: 49 VGLILFVFSLWLWPSSSVASLVSFGLLSTSGTPELETVRYYDLTTV 94 >jgi|Necha2|79951|fgenesh1_pg.sca_12_chr5_2_0000131 Length = 525 Score = 28.9 bits (63), Expect = 2.7 Identities = 28/113 (24%), Positives = 43/113 (38%) Frame = +3 Query: 33 SCHAGLCSDDARRVNQAATIRPRPNRSLNCQPSIWLAKPYR*ASTVPWPRLSCCERRVAV 212 S H+ S + + + +I P PN +L QP + L+ P P LS + A Sbjct: 82 STHSTPPSTRIKHSHPSFSISPSPNPTLTRQPQLPLSSPLPSLLAPPTQLLSSIAQLFAS 141 Query: 213 RLDATQLHSTRRS*CEIPQSRLGNPSIPLQSVWRSRTGHERKDHGICQDVWHH 371 + T +P LG + Q ++ S T ER + WHH Sbjct: 142 SISTT-----------MPPPPLGQRPLSDQELFDSFTDRERDFYD-----WHH 178 >jgi|Necha2|24252|gw1.65.78.1 Length = 405 Score = 28.5 bits (62), Expect = 3.5 Identities = 24/101 (23%), Positives = 46/101 (45%) Frame = -3 Query: 387 VEELKRDAKRLDKFHDLFVRARFLTSKLIAREC*DFQALIAVFRIKSGELSVVELRQASL 208 VEE+++ A L K + ++ L S+ ++ EC + +++G + ++ A L Sbjct: 147 VEEMRKYAPALGKRYTIYTSREDLRSRNVSDEC------VGAIGMRAGSMWPYKMVTALL 200 Query: 207 RRDVHNKTDAATVLYLLIGTVWPAISTADNSKNDLALVGSS 85 R V + L + T S +DN ++D A V +S Sbjct: 201 ERMVRDNK-------LSVQTNAVVTSISDNDEDDYATVHTS 234 >jgi|Necha2|47187|e_gw1.10.558.1 Length = 1138 Score = 28.1 bits (61), Expect = 4.6 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%) Frame = +3 Query: 411 HGASVSVPEAPPLGTPGQLYQVELYQVPRRSRGPTVQAIQSPDRPQ-RLRRRHCRALVQT 587 HG+ P + Y + L + PRR+ T IQ P+ P RR R L+ Sbjct: 438 HGSGFETSRIPGIKQSTWQYYLGLKKTPRRASESTPPPIQEPELPYVSPLRRQLRELIAA 497 Query: 588 SAQGR 602 + R Sbjct: 498 ATSAR 502 >jgi|Necha2|89043|fgenesh1_pg.sca_88_unmapped000008 Length = 572 Score = 28.1 bits (61), Expect = 4.6 Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 1/33 (3%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPN-KRPGKNPRRKPSKN 628 P P P+ S + +SS P+ KRP +P R P N Sbjct: 155 PLPSPSMSSSNATSSTPSGKRPRIDPNRTPRAN 187 >jgi|Necha2|92688|fgenesh1_pm.sca_3_chr4_2_0000303 Length = 756 Score = 27.3 bits (59), Expect = 7.9 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = +2 Query: 533 PRPPPTTSKATLSSSCPNKRPGKNPRRKPSKN 628 P PPP ++ T S P +RP + +K SKN Sbjct: 159 PPPPPLSNPQTSSRPDPPQRPMTSDPKKGSKN 190 Database: banque/fusarium Posted date: Mar 29, 2007 4:45 PM Number of letters in database: 7,530,674 Number of sequences in database: 15,707 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,891,962 Number of Sequences: 15707 Number of extensions: 287001 Number of successful extensions: 1088 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1013 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1083 length of database: 7,530,674 effective HSP length: 96 effective length of database: 6,022,802 effective search space used: 1204560400 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)