BLASTX 2.2.9 [May-01-2004] BLASTX 2.2.9 [May-01-2004] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= NX0AMYA7YC17CM1.SCF (idq=218988) (968 letters) Database: /home/amadoui/banque/arabette 25,820 sequences; 10,745,422 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AT2G25080.1 | Symbol: None | phospholipid hydroperoxide glutathi... 153 1e-37 AT4G31870.1 | Symbol: None | glutathione peroxidase, putative, g... 152 2e-37 AT2G31570.1 | Symbol: None | glutathione peroxidase, putative | ... 147 8e-36 AT4G11600.1 | Symbol: None | glutathione peroxidase, putative | ... 144 5e-35 AT2G43350.1 | Symbol: None | glutathione peroxidase, putative | ... 140 1e-33 AT1G63460.1 | Symbol: None | glutathione peroxidase, putative, c... 136 1e-32 AT3G63080.1 | Symbol: None | glutathione peroxidase, putative, p... 130 1e-30 AT2G48150.1 | Symbol: None | glutathione peroxidase, putative | ... 125 2e-29 AT5G38220.2 | Symbol: None | expressed protein | chr5:15286108-1... 32 0.64 AT5G38220.3 | Symbol: None | similar to expressed protein [Arabi... 32 0.64 AT5G38220.1 | Symbol: None | expressed protein | chr5:15286108-1... 32 0.64 AT1G62640.2 | Symbol: None | similar to beta-ketoacyl-acyl carri... 32 0.64 AT1G62640.1 | Symbol: None | 3-oxoacyl-(acyl-carrier-protein) sy... 32 0.64 AT3G13490.1 | Symbol: None | tRNA synthetase class II (D, K and ... 31 0.83 AT1G66900.1 | Symbol: None | expressed protein | chr1:24962997-2... 31 1.1 AT2G04550.1 | Symbol: None | dual specificity protein phosphatas... 30 2.4 AT2G46060.2 | Symbol: None | transmembrane protein-related, cont... 29 3.2 AT2G46060.1 | Symbol: None | transmembrane protein-related, cont... 29 3.2 AT1G59660.1 | Symbol: None | nucleoporin family protein, contain... 29 4.1 AT4G17190.1 | Symbol: None | farnesyl pyrophosphate synthetase 2... 29 4.1 AT5G04290.1 | Symbol: None | KOW domain-containing transcription... 28 5.4 AT5G21970.1 | Symbol: None | expressed protein, supported by ful... 28 5.4 AT5G61130.1 | Symbol: None | glycosyl hydrolase family protein 1... 28 5.4 AT3G56080.1 | Symbol: None | dehydration-responsive protein-rela... 28 9.2 >AT2G25080.1 | Symbol: None | phospholipid hydroperoxide glutathione peroxidase, chloroplast / PHGPx (GPX1), identical to SP:P52032 Phospholipid hydroperoxide glutathione peroxidase, chloroplast precursor (EC 1.11.1.9) (PHGPx) {Arabidopsis thaliana}; contains Glutathione peroxidases signatures, Glutathione_Peroxid_1 (GKVMLIVNVASRCGLT), Glutathione_Peroxid_2 (LAFPCNQF); contains EST GB:T43669, N38679, R30227, H37043, AA042773; identical to cDNA chloroplast mRNA for glutathione peroxidase GI:2274856 | chr2:10675137-10677089 FORWARD | Aliases: F13D4.40, F13D4_40 Length = 236 Score = 153 bits (387), Expect = 1e-37 Identities = 75/161 (46%), Positives = 107/161 (66%), Gaps = 2/161 (1%) Frame = +3 Query: 393 KSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLL 572 K+ ++ + D++GK V ++KG+V + N S+CGLT NY + L +KY+ QG ++L Sbjct: 77 KTVHDFTVKDIDGKDVALNKFKGKVMLIVNVASRCGLTSSNYSELSHLYEKYKTQGFEIL 136 Query: 573 AFPSNSFG-QETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFG 746 AFP N FG QE GS SEI+ F R+ FP+F K VNGP T P++++LK NA G G Sbjct: 137 AFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYEFLKSNA-GGFLG 195 Query: 747 NFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELLQA 869 IKWNF+KFLID+ GK ++R+ P T+P +IE +I +LL A Sbjct: 196 GLIKWNFEKFLIDKKGKVVERYPPTTSPFQIEKDIQKLLAA 236 >AT4G31870.1 | Symbol: None | glutathione peroxidase, putative, glutathione peroxidase, Arabidopsis thaliana, PIR2:S71250 | chr4:15410211-15411623 FORWARD | Aliases: F11C18.70, F11C18_70 Length = 233 Score = 152 bits (384), Expect = 2e-37 Identities = 73/161 (45%), Positives = 108/161 (67%), Gaps = 2/161 (1%) Frame = +3 Query: 393 KSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLL 572 KS ++ + D++G V +++KG+ + N S+CGLT NY + +L +KY++QG ++L Sbjct: 74 KSVHDFTVKDIDGNDVSLDKFKGKPLLIVNVASRCGLTSSNYSELSQLYEKYKNQGFEIL 133 Query: 573 AFPSNSF-GQETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFG 746 AFP N F GQE GS EI+ F R+ FP+F K VNGP T P++K+LK NA G G Sbjct: 134 AFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYKFLKSNA-GGFLG 192 Query: 747 NFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELLQA 869 + IKWNF+KFL+D+ GK ++R+ P T+P +IE +I +LL A Sbjct: 193 DIIKWNFEKFLVDKKGKVVERYPPTTSPFQIEKDIQKLLAA 233 >AT2G31570.1 | Symbol: None | glutathione peroxidase, putative | chr2:13445082-13446955 REVERSE | Aliases: T9H9.9, T9H9_9 Length = 169 Score = 147 bits (371), Expect = 8e-36 Identities = 72/155 (46%), Positives = 101/155 (65%), Gaps = 2/155 (1%) Frame = +3 Query: 393 KSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLL 572 KS Y+ + D+ G V ++YKG+ + N S+CGLTD NYK+ L +KY++QGL++L Sbjct: 7 KSIYDFTVKDIGGNDVSLDQYKGKTLLVVNVASKCGLTDANYKELNVLYEKYKEQGLEIL 66 Query: 573 AFPSNSF-GQETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFG 746 AFP N F GQE G+ EIQ V R+ FP+F K VNG T P++KYLK G + Sbjct: 67 AFPCNQFLGQEPGNNEEIQQTVCTRFKAEFPIFDKVDVNGKNTAPLYKYLKAEKGGLLI- 125 Query: 747 NFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEI 851 + IKWNF KFL+ DGK ++R+SP+T+P + E +I Sbjct: 126 DAIKWNFTKFLVSPDGKVLQRYSPRTSPLQFEKDI 160 >AT4G11600.1 | Symbol: None | glutathione peroxidase, putative | chr4:7009763-7011350 REVERSE | Aliases: T5C23.30, T5C23_30 Length = 232 Score = 144 bits (364), Expect = 5e-35 Identities = 71/162 (43%), Positives = 103/162 (63%), Gaps = 2/162 (1%) Frame = +3 Query: 384 NQVKSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGL 563 ++ KS Y+ + D G V YKG+V + N SQCGLT+ NY + +L +KY+ G Sbjct: 68 SEPKSLYDFTVKDAKGNDVDLSIYKGKVLLIVNVASQCGLTNSNYTELAQLYEKYKGHGF 127 Query: 564 QLLAFPSNSFG-QETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGS 737 ++LAFP N FG QE G+ EI F R+ +P+F K VNG + PV+K+LK ++ G Sbjct: 128 EILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDKAAPVYKFLK-SSKGG 186 Query: 738 VFGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 +FG+ IKWNF KFL+D+DG + RF+P T+P IE ++ +LL Sbjct: 187 LFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEKDVKKLL 228 >AT2G43350.1 | Symbol: None | glutathione peroxidase, putative | chr2:18015720-18017677 REVERSE | Aliases: T1O24.9 Length = 206 Score = 140 bits (352), Expect = 1e-33 Identities = 72/158 (45%), Positives = 101/158 (63%), Gaps = 2/158 (1%) Frame = +3 Query: 396 SFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLLA 575 S Y +S D+ GK V ++ G+V + N S+CGLT NYK+ L KY+ QG ++LA Sbjct: 47 SIYNISVKDIEGKDVSLSKFTGKVLLIVNVASKCGLTHGNYKEMNILYAKYKTQGFEILA 106 Query: 576 FPSNSFG-QETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFGN 749 FP N FG QE GS EI+ V + + FP+F K VNG T P++ +LK+ G +FG+ Sbjct: 107 FPCNQFGSQEPGSNMEIKETVCNIFKAEFPIFDKIEVNGKNTCPLYNFLKEQ-KGGLFGD 165 Query: 750 FIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 IKWNF KFL+D+ G + R++P T+P EIE +IV+LL Sbjct: 166 AIKWNFAKFLVDRQGNVVDRYAPTTSPLEIEKDIVKLL 203 >AT1G63460.1 | Symbol: None | glutathione peroxidase, putative, contains Pfam profile: PF00255 glutathione peroxidases | chr1:23538681-23540132 FORWARD | Aliases: F2K11.16, F2K11_16 Length = 167 Score = 136 bits (343), Expect = 1e-32 Identities = 67/159 (42%), Positives = 103/159 (64%), Gaps = 2/159 (1%) Frame = +3 Query: 393 KSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLL 572 +S YELS D G + +YK +V + N S+CG+T+ NY + EL +Y+D+GL++L Sbjct: 7 ESVYELSIEDAKGNNLALSQYKDKVLLIVNVASKCGMTNSNYTELNELYNRYKDKGLEIL 66 Query: 573 AFPSNSFG-QETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFG 746 AFP N FG +E G+ +I FV R+ FP+F K VNG P++K+LK+ G +FG Sbjct: 67 AFPCNQFGDEEPGTNDQITDFVCTRFKSEFPIFNKIEVNGENASPLYKFLKKGKWG-IFG 125 Query: 747 NFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 + I+WNF KFL+D++G+ ++R+ P T+P +E +I LL Sbjct: 126 DDIQWNFAKFLVDKNGQAVQRYYPTTSPLTLEHDIKNLL 164 >AT3G63080.1 | Symbol: None | glutathione peroxidase, putative, phospholipid-hydroperoxide glutathione peroxidase, spinach, PIR:JC5619 | chr3:23320712-23322361 FORWARD | Aliases: T20O10.180 Length = 173 Score = 130 bits (327), Expect = 1e-30 Identities = 72/175 (41%), Positives = 100/175 (57%), Gaps = 2/175 (1%) Frame = +3 Query: 345 GASIQEPVGEFDPNQVKSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQ 524 GAS V E KS ++ + D +GK V Y+G+V + N S+CG T+ NY Q Sbjct: 2 GASSSSSVSE------KSIHQFTVKDSSGKEVDLSVYQGKVLLVVNVASKCGFTESNYTQ 55 Query: 525 FVELDKKYRDQGLQLLAFPSNSF-GQETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQ 698 EL +KY+DQG +LAFP N F QE G++ E F R+ +PVFQK VNG Sbjct: 56 LTELYRKYKDQGFVVLAFPCNQFLSQEPGTSEEAHQFACTRFKAEYPVFQKVRVNGQNAA 115 Query: 699 PVFKYLKQNASGSVFGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELL 863 PV+K+LK + S G+ IKWNF KFL+ +DG+ I R+ +P I+ +I + L Sbjct: 116 PVYKFLK-SKKPSFLGSRIKWNFTKFLVGKDGQVIDRYGTTVSPLSIQKDIEKAL 169 >AT2G48150.1 | Symbol: None | glutathione peroxidase, putative | chr2:19695032-19696243 REVERSE | Aliases: F11L15.5 Length = 170 Score = 125 bits (315), Expect = 2e-29 Identities = 64/160 (40%), Positives = 96/160 (60%), Gaps = 2/160 (1%) Frame = +3 Query: 393 KSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGSQCGLTDVNYKQFVELDKKYRDQGLQLL 572 +S ++ + D +GK + Y+G+V + N S+CG T+ NY Q EL +KY+DQ ++L Sbjct: 10 RSVHQFTVKDSSGKDLNMSIYQGKVLLIVNVASKCGFTETNYTQLTELYRKYKDQDFEIL 69 Query: 573 AFPSNSF-GQETGSASEIQSFV-DRYGVTFPVFQKAPVNGPQTQPVFKYLKQNASGSVFG 746 AFP N F QE G++ E F +R+ +PVFQK VNG P++K+LK + + G Sbjct: 70 AFPCNQFLYQEPGTSQEAHEFACERFKAEYPVFQKVRVNGQNAAPIYKFLKA-SKPTFLG 128 Query: 747 NFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEIVELLQ 866 + IKWNF KFL+ +DG I R+ TP IE +I + L+ Sbjct: 129 SRIKWNFTKFLVGKDGLVIDRYGTMVTPLSIEKDIKKALE 168 >AT5G38220.2 | Symbol: None | expressed protein | chr5:15286108-15288565 FORWARD | Aliases: None Length = 238 Score = 31.6 bits (70), Expect = 0.64 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +3 Query: 516 YKQFVELDKKYRDQGLQLLAFPSNSFGQETGSASEIQSFVD 638 ++ F+EL + R L L+ + + +GQ TG ASE ++ D Sbjct: 83 FELFIELSNRLR---LNLMGYDYSGYGQSTGKASECNTYAD 120 >AT5G38220.3 | Symbol: None | similar to expressed protein [Arabidopsis thaliana] (TAIR:At1g66900.1); similar to Cgi67 serine protease-like [Oryza sativa (japonica cultivar-group)] (GB:BAD82560.1); contains InterPro domain Esterase/lipase/thioesterase (InterPro:IPR000379) | chr5:15286057-15288616 FORWARD | Aliases: None Length = 336 Score = 31.6 bits (70), Expect = 0.64 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +3 Query: 516 YKQFVELDKKYRDQGLQLLAFPSNSFGQETGSASEIQSFVD 638 ++ F+EL + R L L+ + + +GQ TG ASE ++ D Sbjct: 83 FELFIELSNRLR---LNLMGYDYSGYGQSTGKASECNTYAD 120 >AT5G38220.1 | Symbol: None | expressed protein | chr5:15286108-15288573 FORWARD | Aliases: MXA21.9, MXA21_9 Length = 336 Score = 31.6 bits (70), Expect = 0.64 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +3 Query: 516 YKQFVELDKKYRDQGLQLLAFPSNSFGQETGSASEIQSFVD 638 ++ F+EL + R L L+ + + +GQ TG ASE ++ D Sbjct: 83 FELFIELSNRLR---LNLMGYDYSGYGQSTGKASECNTYAD 120 >AT1G62640.2 | Symbol: None | similar to beta-ketoacyl-acyl carrier protein synthase III [Glycine max] (GB:AAF70509.1); contains InterPro domain Beta-ketoacyl-acyl carrier protein synthase III (FabH) (InterPro:IPR004655) | chr1:23195909-23198740 FORWARD | Aliases: None Length = 404 Score = 31.6 bits (70), Expect = 0.64 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +3 Query: 717 KQNASGSVFGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEI 851 + +++GSVFG+F I +GK + RF+ K P IE+ + Sbjct: 270 ESSSNGSVFGDFPPKQSSYSCIQMNGKEVFRFAVKCVPQSIESAL 314 >AT1G62640.1 | Symbol: None | 3-oxoacyl-(acyl-carrier-protein) synthase III, chloroplast / beta-ketoacyl-ACP synthase III / 3-ketoacyl-acyl carrier protein synthase III (KAS III), identical to SP:P49243 3-oxoacyl-(acyl-carrier-protein) synthase III, chloroplast precursor (EC 2.3.1.41) (Beta-ketoacyl-ACP synthase III) (KAS III) {Arabidopsis thaliana} | chr1:23195951-23198768 FORWARD | Aliases: T3P18.20, T3P18_20 Length = 404 Score = 31.6 bits (70), Expect = 0.64 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = +3 Query: 717 KQNASGSVFGNFIKWNFQKFLIDQDGKPIKRFSPKTTPSEIEAEI 851 + +++GSVFG+F I +GK + RF+ K P IE+ + Sbjct: 270 ESSSNGSVFGDFPPKQSSYSCIQMNGKEVFRFAVKCVPQSIESAL 314 >AT3G13490.1 | Symbol: None | tRNA synthetase class II (D, K and N) family protein, similar to SP:Q9RHV9 Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) {Bacillus stearothermophilus}; contains Pfam profile: PF00152 tRNA synthetases class II (D, K and N) | chr3:4395732-4399332 REVERSE | Aliases: MRP15.13 Length = 602 Score = 31.2 bits (69), Expect = 0.83 Identities = 30/114 (26%), Positives = 55/114 (48%), Gaps = 9/114 (7%) Frame = +3 Query: 387 QVKSFYELSAV-DLNGKLVPFEEYKGRVCV---AFNAGSQCGLTDVNYKQFVELDKKYRD 554 Q+K F ++ + +G + E+ + +CV + S L D Y ++DK+YR Sbjct: 179 QLKQFIDIGDILGASGSMKRTEKGELSICVNSFSILTKSLLPLPD-KYHGLTDIDKRYRQ 237 Query: 555 QGLQLLAFP--SNSFGQETGSASEIQSFVDRYG---VTFPVFQKAPVNGPQTQP 701 + + ++A P ++ F + SEI+ V+ +G V PV Q A G + +P Sbjct: 238 RYVDMIANPEVADVFRRRAKIVSEIRKTVESFGYLEVETPVLQGA-AGGAEARP 290 >AT1G66900.1 | Symbol: None | expressed protein | chr1:24962997-24965279 FORWARD | Aliases: T4O24.3, T4O24_3 Length = 272 Score = 30.8 bits (68), Expect = 1.1 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +3 Query: 516 YKQFVELDKKYRDQGLQLLAFPSNSFGQETGSASEIQSFVD 638 ++ FVEL + R + L+ + + +GQ TG ASE ++ D Sbjct: 86 FELFVELSNRLR---VNLMGYDYSGYGQSTGQASECNTYAD 123 >AT2G04550.1 | Symbol: None | dual specificity protein phosphatase family protein, contains Pfam profile: PF00782 dual specificity phosphatase, catalytic domain | chr2:1588401-1590163 FORWARD | Aliases: T1O3.4, T1O3_4 Length = 257 Score = 29.6 bits (65), Expect = 2.4 Identities = 21/54 (38%), Positives = 24/54 (44%), Gaps = 5/54 (9%) Frame = -2 Query: 400 NDLTWFGSNSPT-GSWIEAPAFVNEPNHS----PCSSEDLAESTTGSTPTDPNT 254 ND FG P + +AP F N P S P SS E T G+TP P T Sbjct: 195 NDAPTFGFGFPKIDNQAQAPVFNNAPTSSIFSSPASSIPPQEFTFGATPPKPTT 248 >AT2G46060.2 | Symbol: None | transmembrane protein-related, contains weak similarity to Swiss-Prot:Q9HCN3 transmembrane protein 8 precursor (M83 protein) (Homo sapiens) | chr2:18948172-18952129 REVERSE | Aliases: None Length = 766 Score = 29.3 bits (64), Expect = 3.2 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = +3 Query: 363 PVGEFDPNQVKSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGS 491 PVG+ PN + Y L AV G L PF+ Y V A +GS Sbjct: 338 PVGKAGPNCGQQIYILQAVMRRGWLTPFQSYYFPVNDASLSGS 380 >AT2G46060.1 | Symbol: None | transmembrane protein-related, contains weak similarity to Swiss-Prot:Q9HCN3 transmembrane protein 8 precursor (M83 protein) (Homo sapiens) | chr2:18948172-18952172 REVERSE | Aliases: T3F17.29 Length = 807 Score = 29.3 bits (64), Expect = 3.2 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = +3 Query: 363 PVGEFDPNQVKSFYELSAVDLNGKLVPFEEYKGRVCVAFNAGS 491 PVG+ PN + Y L AV G L PF+ Y V A +GS Sbjct: 338 PVGKAGPNCGQQIYILQAVMRRGWLTPFQSYYFPVNDASLSGS 380 >AT1G59660.1 | Symbol: None | nucleoporin family protein, contains Pfam profiles: PF04096 nucleoporin autopeptidase, PF03093 nucleoporin FG repeat family | chr1:21928358-21933089 FORWARD | Aliases: T30E16.24, T30E16_24 Length = 997 Score = 28.9 bits (63), Expect = 4.1 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -2 Query: 448 SNGTSFPFKSTALSS*NDLTWFG-SNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGST 272 S+G +F ST ++ + FG S+SP+ ++ +PAF + SS +S+ GST Sbjct: 249 SSGGAFGSSSTPTFGASNTSAFGASSSPSFNFGSSPAFGQSTSAFGSSSFGSTQSSLGST 308 Query: 271 PT 266 P+ Sbjct: 309 PS 310 >AT4G17190.1 | Symbol: None | farnesyl pyrophosphate synthetase 2 (FPS2) / FPP synthetase 2 / farnesyl diphosphate synthase 2, identical to SP:Q43315 Farnesyl pyrophosphate synthetase 2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate synthetase 2) (Includes: Dimethylallyltransferase (EC 2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)) {Arabidopsis thaliana} | chr4:9648552-9650923 REVERSE | Aliases: DL4630C, FCAALL.91 Length = 342 Score = 28.9 bits (63), Expect = 4.1 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 2/72 (2%) Frame = -1 Query: 788 LVNQKLLEVPLDEVAKHTTRCILLQVLEYGLRLRSIHRGL--LEDWKSDSIAVNKRLDFT 615 ++ LL+ P E H +R L ++L+Y +R ++RGL ++ +K + + D T Sbjct: 14 VLKSDLLQDPSFEFT-HESRQWLERMLDYNVRGGKLNRGLSVVDSYK----LLKQGQDLT 68 Query: 614 SRASFLSKRVGW 579 + +FLS +GW Sbjct: 69 EKETFLSCALGW 80 >AT5G04290.1 | Symbol: None | KOW domain-containing transcription factor family protein | chr5:1196070-1202654 FORWARD | Aliases: T19N18.20, T19N18_20 Length = 1493 Score = 28.5 bits (62), Expect = 5.4 Identities = 14/46 (30%), Positives = 16/46 (34%) Frame = -1 Query: 950 SAVWGSFSNGGRSWGSFRAGGSILXXXXXXXXXXXXXXFARSSLWR 813 S W S GGR +G R GG RSS W+ Sbjct: 1322 SKPWNEHSGGGRGFGERRGGGGFRGGRNQSGRGGRSFDGGRSSSWK 1367 Score = 27.7 bits (60), Expect = 9.2 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -1 Query: 947 AVWGSFSNGGRSWGSFRAGGSI 882 ++WG +GG SWG GGS+ Sbjct: 1021 SLWGKKDDGGSSWGKEDDGGSL 1042 >AT5G21970.1 | Symbol: None | expressed protein, supported by full-length cDNA gi:22531216 from (Arabidopsis thaliana) | chr5:7261603-7263516 FORWARD | Aliases: None Length = 449 Score = 28.5 bits (62), Expect = 5.4 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 2/42 (4%) Frame = -1 Query: 830 RSSLWRESLNGLAILVNQ--KLLEVPLDEVAKHTTRCILLQV 711 R LW G L+++ KLLE D+ A+H TRC+++ V Sbjct: 127 RGVLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSV 168 >AT5G61130.1 | Symbol: None | glycosyl hydrolase family protein 17, similar to beta-1,3-glucanase GI:15150341 from (Camellia sinensis); C-terminal homology only | chr5:24604456-24606806 REVERSE | Aliases: MAF19.13, MAF19_13 Length = 201 Score = 28.5 bits (62), Expect = 5.4 Identities = 25/120 (20%), Positives = 44/120 (36%) Frame = -2 Query: 580 GKAKSCRPWSRYFLSNSTNCL*FTSVKPHCEPALNATQTRPLYSSNGTSFPFKSTALSS* 401 G C P +C +V+ HC A+N+ + S +F Sbjct: 42 GNGADCNP-----TKPKQSCFNPDNVRSHCNYAVNSFFQKKGQSPGSCNFD--------- 87 Query: 400 NDLTWFGSNSPTGSWIEAPAFVNEPNHSPCSSEDLAESTTGSTPTDPNTNR*SGASSSRT 221 G+ +PT S +P+++ C+ A ++GST P T G+ ++ T Sbjct: 88 ------GTATPTNS---------DPSYTGCAFPTSASGSSGSTTVTPGTTNPKGSPTTTT 132 >AT3G56080.1 | Symbol: None | dehydration-responsive protein-related, similar to early-responsive to dehydration stress ERD3 protein (Arabidopsis thaliana) GI:15320410; contains Pfam profile PF03141: Putative methyltransferase | chr3:20821288-20824015 REVERSE | Aliases: F18O21.40 Length = 357 Score = 27.7 bits (60), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 4/36 (11%) Frame = -1 Query: 317 TLLVRGL-GRKHDW---FNTYRSQYESVIRSIFFTH 222 T+ RGL G HDW FNTY Y+ + S FT+ Sbjct: 258 TIFDRGLIGIYHDWCESFNTYPRSYDLLHSSFLFTN 293 Database: /home/amadoui/banque/arabette Posted date: Mar 30, 2007 3:37 PM Number of letters in database: 10,745,422 Number of sequences in database: 25,820 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,246,126 Number of Sequences: 25820 Number of extensions: 387728 Number of successful extensions: 1404 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 1326 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1387 length of database: 10,745,422 effective HSP length: 99 effective length of database: 8,189,242 effective search space used: 1826200966 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)