BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448753.2.1
(537 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA98638.1| RNA-binding protein precursor [Oryza sativa ... 171 2e-41
ref|NP_200911.1| RNA binding / nucleic acid binding [Arabid... 132 8e-30
gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tab... 130 2e-29
dbj|BAA05170.1| RNA-binding glycine rich protein (RGP-2) [N... 129 4e-29
gb|AAL07519.1| RNA-binding protein precursor [Solanum tuber... 128 9e-29
gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pis... 128 1e-28
dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris] 127 3e-28
dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris] 127 3e-28
ref|NP_177563.1| RNA binding / nucleic acid binding [Arabid... 125 8e-28
gb|ABA40461.1| RNA binding protein-like protein [Solanum tu... 124 2e-27
gb|ABB97027.1| unknown [Brassica rapa] 124 2e-27
ref|NP_849377.1| ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2... 120 3e-26
emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana] 120 3e-26
ref|NP_193121.1| ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2... 120 3e-26
gb|AAM01112.1| Putative RNA-binding protein [Oryza sativa] 119 4e-26
ref|NP_914833.1| putative glycine-rich RNA-binding protein ... 112 5e-24
ref|NP_850629.1| RNA binding / nucleic acid binding [Arabid... 111 2e-23
gb|AAM63053.1| glycine-rich RNA binding protein, putative [... 110 2e-23
emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidops... 108 1e-22
dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomit... 100 3e-20
gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAD48471.1| glycine-rich RNA-binding protein [Glycine max] 99 6e-20
gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays] ... 99 6e-20
gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays] ... 99 6e-20
gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays] ... 99 6e-20
gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays] 99 6e-20
gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays] 99 8e-20
gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays] ... 99 8e-20
gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays] 99 8e-20
gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays] 99 8e-20
gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays] 99 8e-20
gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays] 99 1e-19
gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays] 99 1e-19
emb|CAA43431.1| glycine-rich protein [Zea mays] 98 1e-19
gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargon... 97 2e-19
gb|AAB07749.1| low temperature-responsive RNA-binding protein 97 4e-19
gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays] 96 5e-19
gb|AAD28176.1| glycine-rich RNA-binding protein [Picea glauca] 96 7e-19
gb|AAB65412.1| glycine-rich protein [Oryza sativa] 95 1e-18
emb|CAC83314.1| glycine rich RNA binding protein [Oryza sat... 95 1e-18
emb|CAD29693.1| putative glycine rich protein [Rumex obtusi... 95 1e-18
gb|AAA75104.1| single-stranded nucleic acid binding protein... 95 1e-18
gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexica... 94 2e-18
gb|AAT85299.1| glycine-rich RNA-binding protein, putative [... 94 2e-18
emb|CAA31077.1| ABA-inducible gene protein [Zea mays] >gi|1... 94 2e-18
gb|ABA99935.1| glycine-rich RNA-binding protein, putative [... 94 3e-18
emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum b... 94 3e-18
emb|CAA05728.1| OsGRP1 [Oryza sativa (japonica cultivar-gro... 94 3e-18
gb|AAF31404.1| putative glycine-rich RNA-binding protein 2 ... 94 3e-18
gb|ABB87126.1| putative glycine-rich RNA binding protein-li... 94 3e-18
gb|AAF31403.1| putative glycine-rich RNA binding protein 3 ... 94 3e-18
gb|AAB66885.1| glycine-rich protein [Oryza sativa] 93 4e-18
emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus c... 93 4e-18
gb|AAF31402.1| putative glycine-rich RNA binding protein 1 ... 93 4e-18
gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa] 93 6e-18
gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bi... 92 7e-18
emb|CAA88558.1| glycine rich protein, RNA binding protein [... 92 9e-18
gb|AAB66884.1| glycine-rich protein [Oryza sativa] 92 1e-17
dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae] 91 2e-17
dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomit... 91 2e-17
gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidop... 91 3e-17
ref|NP_850017.1| ATGRP7; RNA binding [Arabidopsis thaliana] 91 3e-17
ref|NP_179760.1| ATGRP7; RNA binding [Arabidopsis thaliana]... 91 3e-17
ref|NP_001017228.1| hypothetical protein LOC549982 [Xenopus... 91 3e-17
dbj|BAA88978.1| BFCIRP [Rana catesbeiana] 91 3e-17
gb|AAF06329.1| glycine-rich RNA binding protein [Medicago s... 91 3e-17
emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvest... 90 4e-17
emb|CAA73034.1| SGRP-1 [Solanum commersonii] 90 4e-17
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus un... 90 4e-17
gb|AAH86491.1| Rbm3 protein [Mus musculus] 90 4e-17
gb|AAH06580.1| Rbm3 protein [Mus musculus] >gi|74228699|dbj... 90 4e-17
ref|XP_343774.2| PREDICTED: RNA binding motif (RNP1, RRM) p... 90 4e-17
gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa] 90 4e-17
ref|NP_006734.1| RNA binding motif protein 3 isoform a [Hom... 90 4e-17
gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus] 90 4e-17
gb|AAH59098.1| Rbm3 protein [Mus musculus] >gi|26352956|dbj... 90 4e-17
dbj|BAB92955.1| cold inducible RNA-binding protein alpha [H... 90 5e-17
gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar] 90 5e-17
emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbagin... 90 5e-17
dbj|BAA03743.1| RNA-binding gricine-rich protein-1 (RGP-1c)... 90 5e-17
ref|NP_189273.1| ARRZ-1A; RNA binding / nucleotide binding ... 90 5e-17
gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana] >... 90 5e-17
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A... 89 6e-17
ref|XP_863171.1| PREDICTED: similar to RNA binding motif pr... 89 6e-17
dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thal... 89 8e-17
gb|AAL13082.1| putative glycine-rich RNA-binding protein [P... 89 8e-17
ref|NP_956311.1| cold inducible RNA binding protein [Danio ... 89 1e-16
dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hy... 89 1e-16
gb|AAM62588.1| glycine-rich RNA-binding protein, putative [... 88 1e-16
ref|NP_173298.1| RNA binding / nucleic acid binding [Arabid... 88 1e-16
gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia ... 88 1e-16
ref|NP_920649.1| putative RNA-binding protein [Oryza sativa... 88 2e-16
emb|CAA78513.1| glycine-rich RNA binding protein [Brassica ... 87 2e-16
ref|XP_868602.1| PREDICTED: similar to cold inducible RNA b... 87 2e-16
dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomit... 87 3e-16
emb|CAA89058.1| putative glycine rich RNA binding protein [... 87 3e-16
dbj|BAA03741.1| RNA-binding glycine-rich protein-1 (RGP-1a)... 87 3e-16
emb|CAA41152.1| glycine-rich protein [Daucus carota] >gi|54... 87 3e-16
emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclea... 87 3e-16
ref|NP_568681.1| RPS19; RNA binding [Arabidopsis thaliana] ... 87 3e-16
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis th... 87 4e-16
ref|NP_181259.1| RNA binding / nucleic acid binding [Arabid... 87 4e-16
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A... 87 4e-16
gb|AAH54250.1| Xcirp2 protein [Xenopus laevis] >gi|11761319... 87 4e-16
ref|NP_001271.1| cold inducible RNA binding protein [Homo s... 86 5e-16
gb|AAZ38826.1| aggrecan promoter binding protein [Gallus ga... 86 5e-16
ref|XP_533961.1| PREDICTED: similar to cold inducible RNA b... 86 5e-16
ref|NP_849523.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA bindi... 86 5e-16
gb|AAP36943.1| Homo sapiens cold inducible RNA binding prot... 86 5e-16
gb|AAI02774.1| Hypothetical protein LOC507120 [Bos taurus] ... 86 5e-16
ref|XP_868600.1| PREDICTED: similar to cold inducible RNA b... 86 5e-16
ref|NP_001026518.1| cold inducible RNA binding protein [Gal... 86 5e-16
ref|NP_195637.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA bindi... 86 5e-16
gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia ... 86 5e-16
ref|XP_868601.1| PREDICTED: similar to cold inducible RNA b... 86 5e-16
ref|NP_849524.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA bindi... 86 5e-16
dbj|BAA03742.1| RNA-binding glycine-rich protein-1 (RGP-1b)... 86 5e-16
ref|NP_917982.1| putative 29 kDa ribonucleoprotein A, chlor... 86 7e-16
ref|NP_187457.1| RNA binding / nucleic acid binding [Arabid... 86 9e-16
pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18... 86 9e-16
gb|AAH69219.1| Cold inducible RNA binding protein [Rattus n... 85 1e-15
gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetul... 85 1e-15
ref|XP_896365.1| PREDICTED: similar to Putative RNA-binding... 85 1e-15
ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella... 85 1e-15
gb|AAW44674.1| glycine-rich RNA binding protein, putative [... 85 2e-15
gb|AAW44675.1| glycine-rich RNA binding protein, putative [... 85 2e-15
sp|O93235|CIRBP_XENLA Cold-inducible RNA-binding protein (G... 84 2e-15
gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis] 84 2e-15
emb|CAA37880.1| unnamed protein product [Nicotiana sylvestr... 84 2e-15
ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella... 84 2e-15
gb|AAG09816.1| cold-inducible RNA binding protein XCIRP-1 [... 84 3e-15
dbj|BAE56344.1| unnamed protein product [Aspergillus oryzae] 84 3e-15
emb|CAD18921.1| RNA-binding protein precursor [Persea ameri... 84 3e-15
gb|AAO90692.1| nucleic acid binding domain protein [Coxiell... 84 3e-15
ref|NP_190914.1| CP29; RNA binding [Arabidopsis thaliana] >... 83 4e-15
dbj|BAA06519.1| cp29 [Arabidopsis thaliana] 83 4e-15
ref|NP_850692.1| CP29; RNA binding [Arabidopsis thaliana] >... 83 4e-15
ref|XP_758559.1| hypothetical protein UM02412.1 [Ustilago m... 83 4e-15
emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotia... 83 6e-15
emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvest... 82 8e-15
dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvest... 82 8e-15
gb|AAA33486.1| nucleic acid-binding protein 82 8e-15
gb|AAA79045.1| 24 kDa RNA binding protein 82 8e-15
gb|AAK01176.1| RNA-binding protein [Triticum aestivum] 82 8e-15
emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbagin... 82 8e-15
emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vul... 82 8e-15
pir||S15348 RNA-binding protein, 28K - spinach 82 1e-14
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast ... 82 1e-14
emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea] 82 1e-14
ref|XP_485004.1| PREDICTED: similar to Putative RNA-binding... 82 1e-14
ref|NP_001017797.1| hypothetical protein LOC550495 [Danio r... 82 1e-14
dbj|BAD46651.1| putative nucleic acid-binding protein [Oryz... 82 1e-14
gb|AAH57481.1| Cirbp protein [Danio rerio] 82 1e-14
ref|XP_470714.1| putative ribonucleoprotein [Oryza sativa] ... 81 2e-14
ref|XP_549003.1| PREDICTED: similar to RNA binding motif pr... 81 2e-14
dbj|BAA22411.1| Ps16 protein [Triticum aestivum] 81 2e-14
ref|XP_855044.1| PREDICTED: similar to RNA binding motif pr... 80 3e-14
gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana] >... 80 4e-14
ref|NP_194208.1| RBP31 (31-KDA RNA BINDING PROTEIN); RNA bi... 80 4e-14
dbj|BAA06521.1| cp31 [Arabidopsis thaliana] 80 4e-14
emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana] 80 4e-14
gb|AAA18379.1| RNA-binding protein 2 80 4e-14
dbj|BAD87838.1| hypothetical protein [Oryza sativa (japonic... 80 4e-14
dbj|BAA06520.1| cp31 [Arabidopsis thaliana] 80 4e-14
ref|NP_196239.1| RNA binding / nucleic acid binding [Arabid... 80 4e-14
gb|AAA18380.1| RNA-binding protein 3 80 4e-14
ref|XP_754757.1| hypothetical protein Afu3g08580 [Aspergill... 80 5e-14
ref|XP_476928.1| glycine-rich RNA-binding protein-like [Ory... 79 6e-14
gb|AAL39067.1| single-stranded DNA binding protein precurso... 79 6e-14
gb|AAA33039.1| RNA-binding protein 79 6e-14
ref|XP_915256.1| PREDICTED: similar to Putative RNA-binding... 79 8e-14
ref|XP_470338.1| putative RNA binding protein [Oryza sativa... 79 8e-14
emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare] 79 8e-14
emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum b... 78 1e-13
ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus... 78 1e-13
gb|EAQ86776.1| hypothetical protein CHGG_08029 [Chaetomium ... 78 1e-13
emb|CAA74889.1| ribonucleoprotein [Pisum sativum] >gi|10179... 78 2e-13
gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatu... 78 2e-13
ref|XP_483744.1| nucleic acid-binding protein-like [Oryza s... 77 2e-13
ref|XP_483743.1| putative nucleic acid-binding protein [Ory... 77 2e-13
gb|AAX07503.1| unknown [Gemmata sp. Wa1-1] 77 2e-13
ref|ZP_00243386.1| COG0724: RNA-binding proteins (RRM domai... 77 2e-13
ref|XP_965121.1| hypothetical protein [Neurospora crassa N1... 77 3e-13
emb|CAD18922.1| RNA-binding protein precursor [Persea ameri... 77 3e-13
ref|NP_181287.1| RNA binding / nucleic acid binding [Arabid... 77 4e-13
gb|AAF82129.1| testes-specific heterogenous nuclear ribonuc... 76 5e-13
ref|NP_910645.1| RNA recognition motif (RRM)-containing pro... 76 7e-13
gb|EAQ90849.1| hypothetical protein CHGG_02784 [Chaetomium ... 76 7e-13
emb|CAH25380.1| putative glycine-rich RNA-binding protein [... 76 7e-13
ref|NP_199836.1| RNA binding / nucleic acid binding [Arabid... 76 7e-13
ref|NP_179221.1| RNA binding / nucleic acid binding [Arabid... 75 9e-13
ref|NP_055284.2| testes-specific heterogenous nuclear ribon... 75 2e-12
ref|XP_521823.1| PREDICTED: similar to testes-specific hete... 75 2e-12
ref|XP_469309.1| putative RNA-binding protein [Oryza sativa... 75 2e-12
gb|AAB61213.1| glycine-rich protein [Oryza sativa] 75 2e-12
dbj|BAE00759.1| unnamed protein product [Macaca fascicularis] 75 2e-12
gb|EAQ20895.1| RNA-binding region RNP-1 (RNA recognition m... 74 3e-12
ref|NP_001029535.1| hypothetical protein LOC509771 [Bos tau... 74 3e-12
emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio ... 74 3e-12
gb|AAI14041.1| Unknown (protein for MGC:137496) [Bos taurus] 74 3e-12
ref|ZP_01019076.1| RNA-binding region RNP-1 (RNA recogniti... 74 3e-12
gb|EAQ20775.1| RNA-binding region RNP-1 (RNA recognition m... 74 3e-12
ref|XP_875397.1| PREDICTED: similar to testes-specific hete... 74 3e-12
ref|ZP_01021329.1| RNA-binding region RNP-1 (RNA recogniti... 74 3e-12
gb|AAV59339.1| unknown protein [Oryza sativa (japonica cult... 74 3e-12
emb|CAC86462.1| glycin-rich RNA binding protein [Polytomell... 73 5e-12
gb|AAH57796.1| Testes-specific heterogenous nuclear ribonuc... 73 5e-12
ref|ZP_01090592.1| RNA-binding protein [Blastopirellula mar... 73 5e-12
ref|ZP_00509395.1| RNA-binding region RNP-1 (RNA recogniti... 73 5e-12
ref|XP_863236.1| PREDICTED: similar to RNA binding motif pr... 73 5e-12
gb|AAX07506.1| unknown [Gemmata sp. Wa1-1] 73 6e-12
ref|NP_849832.1| RNA binding / nucleic acid binding [Arabid... 73 6e-12
ref|NP_200269.1| RNA binding / nucleic acid binding [Arabid... 73 6e-12
ref|NP_001017430.1| RNA binding motif protein 3 isoform b [... 73 6e-12
gb|AAD00328.1| RBM1 [Sminthopsis macroura] 72 8e-12
ref|NP_083936.1| testes-specific heterogenous nuclear ribon... 72 8e-12
gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [M... 72 8e-12
ref|XP_480007.1| putative RNA recognition motif (RRM)-conta... 72 8e-12
ref|XP_914797.1| PREDICTED: similar to testes-specific hete... 72 8e-12
ref|NP_193122.2| RNA binding / nucleic acid binding [Arabid... 72 8e-12
ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis... 72 8e-12
emb|CAG09825.1| unnamed protein product [Tetraodon nigrovir... 72 1e-11
gb|AAD00327.1| RBM1 [Macropus eugenii] 72 1e-11
ref|XP_513540.1| PREDICTED: similar to kynurenine aminotran... 72 1e-11
ref|ZP_00502429.1| RNA-binding region RNP-1 (RNA recogniti... 72 1e-11
emb|CAI21694.1| novel protein similar to RNA binding motif ... 72 1e-11
gb|ABB92440.1| RBM1 [Cercopithecus sabaeus] 72 1e-11
gb|ABB92439.1| RBM1 [Hylobates lar] 72 1e-11
gb|ABB92438.1| RBM1 [Pongo pygmaeus] 72 1e-11
gb|ABB92437.1| RBM1 [Gorilla gorilla] >gi|82802771|gb|ABB92... 72 1e-11
gb|ABB92435.1| RBM1 [Homo sapiens] 72 1e-11
gb|AAM71380.1| RNA-binding protein [Chlorobium tepidum TLS]... 72 1e-11
ref|NP_062556.2| RNA binding motif protein, X-linked-like 1... 72 1e-11
gb|AAW40908.1| transformer-2-beta isoform 3, putative [Cryp... 72 1e-11
dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thali... 71 2e-11
gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana] 71 2e-11
ref|NP_851195.1| RNA binding / nucleic acid binding [Arabid... 71 2e-11
ref|NP_974937.1| RNA binding / nucleic acid binding [Arabid... 71 2e-11
ref|XP_521047.1| PREDICTED: similar to Putative RNA-binding... 71 2e-11
dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona i... 71 2e-11
ref|ZP_00527479.1| RNA-binding region RNP-1 (RNA recogniti... 71 2e-11
gb|EAA00972.2| ENSANGP00000018356 [Anopheles gambiae str. P... 71 2e-11
emb|CAE77994.1| RNA-binding protein [Bdellovibrio bacteriov... 71 2e-11
gb|ABB28806.1| RNA-binding region RNP-1 (RNA recognition m... 71 2e-11
ref|NP_001027768.1| glycine rich RNA binding protein [Ciona... 71 2e-11
ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumiga... 71 2e-11
ref|XP_657084.1| RNA-binding protein [Entamoeba histolytica... 70 3e-11
ref|XP_752566.1| nuclear and cytoplasmic polyadenylated RNA... 70 3e-11
dbj|BAC87434.1| unnamed protein product [Homo sapiens] 70 3e-11
emb|CAG31684.1| hypothetical protein [Gallus gallus] 70 3e-11
ref|XP_380618.1| hypothetical protein FG00442.1 [Gibberella... 70 3e-11
ref|XP_478915.1| putative heterogeneous nuclear ribonucleop... 70 3e-11
gb|ABB22978.1| RNA-binding region RNP-1 (RNA recognition m... 70 3e-11
gb|AAH97479.1| Hypothetical protein LOC302855 [Rattus norve... 70 4e-11
ref|XP_586588.2| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
ref|XP_880773.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
ref|XP_529117.1| PREDICTED: similar to testes-specific hete... 70 4e-11
ref|NP_196048.1| RNA binding / nucleic acid binding [Arabid... 70 4e-11
emb|CAG60192.1| unnamed protein product [Candida glabrata C... 70 4e-11
ref|XP_880626.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
ref|XP_866399.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus ... 70 4e-11
emb|CAA80599.1| hnRNP G protein [Homo sapiens] 70 4e-11
dbj|BAE00972.1| unnamed protein product [Macaca fascicularis] 70 4e-11
gb|AAH07435.1| RNA binding motif protein, X chromosome [Hom... 70 4e-11
gb|AAH03710.1| RNA binding motif protein, X chromosome [Mus... 70 4e-11
ref|XP_881201.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
emb|CAB51361.1| heterogeneous nuclear ribonucleoprotein G [... 70 4e-11
ref|XP_866389.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
ref|XP_853786.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
ref|XP_880849.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
gb|AAW41016.1| single-stranded DNA binding protein, putativ... 70 4e-11
gb|AAS95735.1| RNA-binding protein [Desulfovibrio vulgaris ... 70 4e-11
emb|CAG58693.1| unnamed protein product [Candida glabrata C... 70 4e-11
ref|ZP_01128871.1| RNA-binding protein [Nitrococcus mobilis... 70 4e-11
ref|XP_880704.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
ref|XP_866411.1| PREDICTED: similar to Heterogeneous nuclea... 70 4e-11
pir||S41766 heterogeneous nuclear ribonucleoprotein G - human 70 4e-11
ref|XP_917567.1| PREDICTED: similar to Heterogeneous nuclea... 70 5e-11
gb|EAL23252.1| hypothetical protein CNBA3680 [Cryptococcus ... 70 5e-11
ref|XP_452776.1| unnamed protein product [Kluyveromyces lac... 70 5e-11
dbj|BAC31099.1| unnamed protein product [Mus musculus] >gi|... 70 5e-11
ref|NP_849525.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA bindi... 70 5e-11
ref|NP_001031725.1| RNA binding / nucleic acid binding [Ara... 69 7e-11
ref|XP_524964.1| PREDICTED: similar to CGI-01 protein isofo... 69 7e-11
emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana] >... 69 7e-11
ref|NP_567753.1| RNA binding / nucleic acid binding [Arabid... 69 7e-11
gb|AAH70649.1| MGC82187 protein [Xenopus laevis] 69 7e-11
sp|P84586|HNRPG_RAT Heterogeneous nuclear ribonucleoprotein... 69 7e-11
gb|AAO76994.1| putative RNA-binding protein rbpA [Bacteroid... 69 7e-11
emb|CAH08430.1| putative RNA-binding protein [Bacteroides f... 69 7e-11
ref|ZP_00766004.1| RNA-binding region RNP-1 (RNA recogniti... 69 7e-11
ref|XP_575394.1| PREDICTED: similar to RNA binding motif pr... 69 7e-11
gb|AAH87677.1| Unknown (protein for MGC:105811) [Rattus nor... 69 9e-11
ref|ZP_00590701.1| RNA-binding region RNP-1 (RNA recogniti... 69 9e-11
ref|ZP_00661830.1| RNA-binding region RNP-1 (RNA recogniti... 69 9e-11
ref|XP_468382.1| putative RNA-binding protein RNP1 precurso... 69 1e-10
dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae] 69 1e-10
emb|CAH25374.1| putative 29 kDa ribonucleoprotein A [Guilla... 69 1e-10
emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica... 69 1e-10
ref|YP_431499.1| RNA-binding protein (RRM domain) [Hahella ... 69 1e-10
ref|ZP_00532230.1| RNA-binding region RNP-1 (RNA recogniti... 69 1e-10
ref|ZP_00525966.1| RNA-binding region RNP-1 (RNA recogniti... 69 1e-10
ref|ZP_00512344.1| RNA-binding region RNP-1 (RNA recogniti... 69 1e-10
ref|XP_393451.2| PREDICTED: similar to Heterogeneous nuclea... 68 1e-10
emb|CAG62487.1| unnamed protein product [Candida glabrata C... 68 1e-10
ref|NP_176208.1| RNA binding / nucleic acid binding [Arabid... 68 1e-10
ref|NP_921939.1| putative RNA-binding protein [Oryza sativa... 68 1e-10
gb|AAV59341.1| unknown protein [Oryza sativa (japonica cult... 68 1e-10
gb|AAS96688.1| RNA-binding protein [Desulfovibrio vulgaris ... 68 1e-10
gb|AAC65342.1| RNA-binding protein, putative [Treponema pal... 68 1e-10
ref|XP_863190.1| PREDICTED: similar to RNA binding motif pr... 68 1e-10
ref|ZP_00527889.1| RNA-binding region RNP-1 (RNA recogniti... 68 1e-10
emb|CAA37879.1| unnamed protein product [Nicotiana tabacum]... 68 2e-10
emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicoti... 68 2e-10
sp|O35479|HNRPG_MOUSE Heterogeneous nuclear ribonucleoprote... 68 2e-10
emb|CAC18311.1| related to heterogeneous nuclear ribonucleo... 68 2e-10
gb|AAA81023.1| CEBP-1 [Dianthus caryophyllus] 67 3e-10
gb|ABB37976.1| RNA-binding region RNP-1 [Desulfovibrio desu... 67 3e-10
ref|ZP_00532200.1| RNA-binding region RNP-1 (RNA recogniti... 67 3e-10
ref|XP_520521.1| PREDICTED: similar to Heterogeneous nuclea... 67 3e-10
ref|NP_177494.1| RNA binding / nucleic acid binding [Arabid... 67 3e-10
ref|NP_190188.1| RNA binding / nucleic acid binding [Arabid... 67 3e-10
emb|CAF23617.1| probable nucleic acid-binding protein [Para... 67 3e-10
ref|ZP_00111030.1| COG0724: RNA-binding proteins (RRM domai... 67 3e-10
ref|ZP_00522665.1| RNA-binding region RNP-1 (RNA recogniti... 67 3e-10
gb|ABA94921.1| RNA recognition motif. (a.k.a. RRM, RBD, or ... 67 4e-10
ref|XP_658695.1| hypothetical protein AN1091.2 [Aspergillus... 67 4e-10
ref|ZP_00518171.1| RNA-binding region RNP-1 (RNA recogniti... 67 4e-10
ref|ZP_00661617.1| RNA-binding region RNP-1 (RNA recogniti... 67 4e-10
gb|AAQ94565.1| RNA binding motif protein [Danio rerio] 66 6e-10
ref|ZP_00694628.1| RNA-binding region RNP-1 (RNA recogniti... 66 6e-10
ref|XP_944440.1| PREDICTED: similar to RNA binding motif pr... 66 6e-10
ref|XP_467618.1| RNA recognition motif (RRM)-containing pro... 66 6e-10
gb|ABA59216.1| RNA-binding protein, RNP-1 [Nitrosococcus oc... 66 6e-10
ref|XP_798195.1| PREDICTED: similar to RNA-binding region c... 66 6e-10
ref|ZP_00592006.1| RNA-binding region RNP-1 (RNA recogniti... 66 6e-10
ref|ZP_01150371.1| RNA-binding region RNP-1 (RNA recogniti... 66 6e-10
gb|AAF06330.1| vitamin D response element binding protein [... 66 6e-10
ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus... 66 7e-10
emb|CAB86413.1| gar2 [Schizosaccharomyces pombe] >gi|191144... 66 7e-10
emb|CAE47924.1| oligouridylate binding protein, putative [A... 66 7e-10
gb|AAH49509.1| RNA binding motif protein, X-linked [Danio r... 66 7e-10
gb|ABC18895.1| RNA-binding region RNP-1 [Moorella thermoace... 66 7e-10
gb|ABA20598.1| RNA-binding region RNP-1 [Anabaena variabili... 66 7e-10
gb|ABB23885.1| RNA-binding region RNP-1 (RNA recognition m... 66 7e-10
gb|EAQ85846.1| hypothetical protein CHGG_07099 [Chaetomium ... 65 1e-09
dbj|BAE23274.1| unnamed protein product [Mus musculus] 65 1e-09
emb|CAB78428.1| RNA-binding protein like [Arabidopsis thali... 65 1e-09
ref|ZP_00310979.1| COG0724: RNA-binding proteins (RRM domai... 65 1e-09
ref|YP_475096.1| putative RNA-binding protein [Cyanobacteri... 65 1e-09
ref|YP_431779.1| RNA-binding protein (RRM domain) [Hahella ... 65 1e-09
gb|AAS51760.1| ADL160Wp [Ashbya gossypii ATCC 10895] >gi|45... 65 1e-09
gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related p... 65 1e-09
gb|AAF21191.1| putative RNA-binding protein [Arabidopsis th... 65 1e-09
emb|CAA88179.1| gar2 [Schizosaccharomyces pombe] 65 1e-09
dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae] 65 1e-09
ref|NP_850539.1| RNA binding / nucleic acid binding [Arabid... 65 1e-09
gb|AAK92717.1| putative RNA-binding protein [Arabidopsis th... 65 1e-09
ref|NP_566321.1| RNA binding / nucleic acid binding [Arabid... 65 1e-09
gb|AAH45260.1| Hnrpa1-prov protein [Xenopus laevis] 65 1e-09
gb|AAU26358.1| RNA binding protein, cold-inducible rrm [Leg... 65 1e-09
ref|YP_399698.1| RNA-binding region RNP-1 [Synechococcus el... 65 1e-09
ref|ZP_00769324.1| RNA-binding region RNP-1 (RNA recogniti... 65 1e-09
ref|XP_472414.1| OJ000126_13.13 [Oryza sativa (japonica cul... 65 1e-09
ref|XP_385593.1| conserved hypothetical protein [Gibberella... 65 2e-09
ref|XP_390449.1| hypothetical protein FG10273.1 [Gibberella... 65 2e-09
emb|CAH90762.1| hypothetical protein [Pongo pygmaeus] 65 2e-09
emb|CAG84877.1| unnamed protein product [Debaryomyces hanse... 65 2e-09
ref|ZP_00672292.1| RNA-binding region RNP-1 (RNA recogniti... 65 2e-09
ref|YP_476563.1| putative RNA-binding protein [Cyanobacteri... 65 2e-09
ref|YP_473991.1| putative RNA-binding protein [Cyanobacteri... 65 2e-09
ref|XP_594772.2| PREDICTED: similar to Heterogeneous nuclea... 65 2e-09
ref|XP_464699.1| putative heterogeneous nuclearribonucleopr... 64 2e-09
ref|XP_877926.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
dbj|BAC40700.1| unnamed protein product [Mus musculus] >gi|... 64 2e-09
ref|XP_879098.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_877624.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_864295.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_464698.1| putative heterogeneous nuclearribonucleopr... 64 2e-09
ref|XP_879279.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_864315.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|NP_001026156.1| heterogeneous nuclear ribonucleoprotein... 64 2e-09
ref|XP_864174.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_962723.1| hypothetical protein [Neurospora crassa N1... 64 2e-09
ref|XP_863956.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_649094.1| TIA-1 protein [Entamoeba histolytica HM-1:... 64 2e-09
dbj|BAA06523.1| cp33 [Arabidopsis thaliana] 64 2e-09
ref|XP_879191.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
gb|AAA49742.1| ribonucleoprotein A1b 64 2e-09
ref|XP_879366.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_864226.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
gb|EAQ88954.1| hypothetical protein CHGG_05573 [Chaetomium ... 64 2e-09
gb|AAH59107.1| Hnrpa2b1 protein [Mus musculus] 64 2e-09
ref|XP_864274.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
gb|AAH00506.3| HNRPA2B1 protein [Homo sapiens] 64 2e-09
ref|XP_879004.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_878908.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_864199.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_878116.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_878025.1| PREDICTED: similar to Heterogeneous nuclea... 64 2e-09
gb|EAQ92600.1| hypothetical protein CHGG_00835 [Chaetomium ... 64 2e-09
gb|AAN16352.1| heterogeneous nuclear ribonucleoprotein A2/B... 64 2e-09
ref|XP_879529.1| PREDICTED: similar to Heterogeneous nuclea... 64 2e-09
ref|XP_864360.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_864337.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
gb|AAH72090.1| LOC397751 protein [Xenopus laevis] 64 2e-09
sp|P17130|ROA1_XENLA Heterogeneous nuclear ribonucleoprotei... 64 2e-09
ref|XP_869525.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|NP_190806.1| CP33; RNA binding [Arabidopsis thaliana] >... 64 2e-09
dbj|BAD41825.1| glycine-rich RNA-binding protein [Symbiobac... 64 2e-09
dbj|BAD39994.1| glycine-rich RNA-binding protein [Symbiobac... 64 2e-09
ref|YP_477403.1| putative RNA-binding protein [Cyanobacteri... 64 2e-09
ref|ZP_00533321.1| RNA-binding region RNP-1 (RNA recogniti... 64 2e-09
ref|ZP_00512687.1| RNA-binding region RNP-1 (RNA recogniti... 64 2e-09
gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B... 64 2e-09
emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae] >gi|1550721... 64 2e-09
ref|XP_879603.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
ref|XP_878322.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1... 64 2e-09
ref|XP_864379.1| PREDICTED: similar to heterogeneous nuclea... 64 2e-09
gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabido... 64 3e-09
ref|NP_731825.1| squid CG16901-PB, isoform B [Drosophila me... 64 3e-09
ref|NP_566672.1| RNA binding / nucleic acid binding [Arabid... 64 3e-09
emb|CAA44504.1| hrp40.2 [Drosophila melanogaster] 64 3e-09
gb|AAB26988.1| SqdA [Drosophila melanogaster] 64 3e-09
emb|CAA44503.1| hrp40.1 [Drosophila melanogaster] >gi|24646... 64 3e-09
gb|AAB26989.1| SqdB [Drosophila melanogaster] 64 3e-09
ref|NP_652209.1| squid CG16901-PC, isoform C [Drosophila me... 64 3e-09
dbj|BAC89332.1| RNA-binding protein [Gloeobacter violaceus ... 64 3e-09
ref|ZP_00673743.1| RNA-binding region RNP-1 (RNA recogniti... 64 3e-09
gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica ole... 64 3e-09
ref|XP_590414.2| PREDICTED: similar to Heterogeneous nuclea... 64 4e-09
emb|CAF96554.1| unnamed protein product [Tetraodon nigrovir... 64 4e-09
gb|AAF13099.1| putative RNA-binding protein, 3' partial [Ar... 64 4e-09
dbj|BAA77714.1| RNA-binding protein [Anabaena variabilis] 64 4e-09
ref|ZP_01124405.1| RNA-binding protein RbpD [Synechococcus ... 64 4e-09
ref|XP_749738.1| heterogeneous nuclear ribonucleoprotein HR... 64 4e-09
gb|AAH84487.1| Heterogeneous nuclear ribonucleoprotein A1 [... 64 4e-09
ref|NP_568685.1| RNA binding / nucleic acid binding [Arabid... 63 5e-09
gb|AAM63044.1| RNA-binding protein-like [Arabidopsis thaliana] 63 5e-09
ref|XP_886645.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
ref|XP_865220.1| PREDICTED: similar to RNA-binding region (... 63 5e-09
gb|AAH04000.1| Rnpc2 protein [Mus musculus] 63 5e-09
emb|CAE45890.1| hypothetical protein [Homo sapiens] 63 5e-09
emb|CAD97833.1| hypothetical protein [Homo sapiens] 63 5e-09
ref|XP_865145.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
dbj|BAB09088.1| RNA-binding protein-like [Arabidopsis thali... 63 5e-09
ref|XP_585544.2| PREDICTED: similar to RNA-binding region c... 63 5e-09
dbj|BAE32977.1| unnamed protein product [Mus musculus] >gi|... 63 5e-09
ref|XP_886717.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
emb|CAH18281.2| hypothetical protein [Homo sapiens] 63 5e-09
emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schis... 63 5e-09
ref|XP_425690.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
ref|XP_865090.1| PREDICTED: similar to RNA-binding region (... 63 5e-09
ref|XP_886619.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
ref|XP_865289.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
ref|XP_865202.1| PREDICTED: similar to RNA-binding region (... 63 5e-09
ref|XP_886666.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
ref|XP_886555.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
ref|XP_865070.1| PREDICTED: similar to RNA-binding region (... 63 5e-09
gb|AAI05542.1| Unknown (protein for IMAGE:8120827) [Bos tau... 63 5e-09
ref|XP_886657.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
dbj|BAC04244.1| unnamed protein product [Homo sapiens] >gi|... 63 5e-09
ref|XP_865304.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
gb|AAH86645.1| Rnpc2 protein [Mus musculus] >gi|74151058|db... 63 5e-09
ref|XP_873382.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
gb|AAL32373.1| transcription coactivator CAPER [Mus musculu... 63 5e-09
ref|XP_719050.1| putative nuclear localization sequence bin... 63 5e-09
ref|XP_886631.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
dbj|BAE22477.1| unnamed protein product [Mus musculus] 63 5e-09
ref|XP_865167.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
dbj|BAB08354.1| unnamed protein product [Arabidopsis thaliana] 63 5e-09
gb|ABA22740.1| RNA-binding region RNP-1 [Anabaena variabili... 63 5e-09
gb|AAA85379.1| RNA binding protein [Synechocystis sp. PCC 6... 63 5e-09
emb|CAH11469.1| hypothetical protein [Legionella pneumophil... 63 5e-09
gb|AAA17426.1| RNA-binding protein 63 5e-09
gb|ABB37594.1| RNA-binding region RNP-1 [Desulfovibrio desu... 63 5e-09
gb|AAW40816.1| hypothetical protein CNA02490 [Cryptococcus ... 63 5e-09
gb|EAL23587.1| hypothetical protein CNBA2340 [Cryptococcus ... 63 5e-09
ref|XP_865185.1| PREDICTED: similar to RNA-binding region c... 63 5e-09
gb|AAH44487.1| RNA-binding region (RNP1, RRM) containing 2 ... 63 6e-09
emb|CAA22535.1| SPBC660.15 [Schizosaccharomyces pombe] >gi|... 63 6e-09
ref|XP_904576.1| PREDICTED: similar to heterogeneous nuclea... 63 6e-09
ref|XP_896312.1| PREDICTED: similar to heterogeneous nuclea... 63 6e-09
gb|AAX28335.2| SJCHGC05136 protein [Schistosoma japonicum] 63 6e-09
ref|XP_904566.1| PREDICTED: similar to heterogeneous nuclea... 63 6e-09
emb|CAJ05119.1| hypothetical protein, conserved [Leishmania... 63 6e-09
gb|AAB27595.1| FBRNP [Homo sapiens] >gi|2119040|pir||I52962... 63 6e-09
emb|CAA66479.1| RNA- or ssDNA-binding protein [Vicia faba v... 63 6e-09
ref|XP_904563.1| PREDICTED: similar to heterogeneous nuclea... 63 6e-09
emb|CAE19835.1| RNA-binding protein RbpD [Prochlorococcus m... 63 6e-09
emb|CAE71709.1| Hypothetical protein CBG18686 [Caenorhabdit... 63 6e-09
>gb|ABA98638.1| RNA-binding protein precursor [Oryza sativa (japonica
cultivar-group)]
Length = 258
Score = 171 bits (432), Expect = 2e-41
Identities = 88/118 (74%), Positives = 95/118 (80%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M LANK+G LLK ATSS + +YQ+IRCMSSSKLFVGGLSYGTD+ SLRD FA YGQV
Sbjct: 1 MALANKIGNLLKRATSSSPA---LYQSIRCMSSSKLFVGGLSYGTDEQSLRDTFANYGQV 57
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
IEAKII DRE+GRSRGFGFITY ITA+DGK LDGRNIRVN ANERTGGFR
Sbjct: 58 IEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNTANERTGGFR 115
>ref|NP_200911.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
Length = 309
Score = 132 bits (331), Expect = 8e-30
Identities = 61/122 (50%), Positives = 87/122 (71%), Gaps = 6/122 (4%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKS------SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
M +K G +LK T+ + S+ S++QAIRCMSSSKLF+GG++Y D+ SLR+ F
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERT 385
KYG+V++ ++ILDRE+GRSRGFGF+T+T I A+DG+ L GR ++VN+AN+RT
Sbjct: 61 TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRT 120
Query: 386 GG 391
G
Sbjct: 121 SG 122
>gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 130 bits (327), Expect = 2e-29
Identities = 67/124 (54%), Positives = 88/124 (70%), Gaps = 7/124 (5%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKS------SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
M N++G +LK + S S SN S++QAIR MSSSKLFVGGLSYGTD+ SL++ F
Sbjct: 1 MAFFNRVGSILKQSVSKHSNLELSASNASLFQAIRSMSSSKLFVGGLSYGTDESSLKEAF 60
Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE-R 382
++YG VIEA++I+DR++GRSRGFGFI++ + AMDG+ L GR IRVN+A E R
Sbjct: 61 SQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNYATEKR 120
Query: 383 TGGF 394
GF
Sbjct: 121 RAGF 124
>dbj|BAA05170.1| RNA-binding glycine rich protein (RGP-2) [Nicotiana sylvestris]
Length = 259
Score = 129 bits (325), Expect = 4e-29
Identities = 63/122 (51%), Positives = 88/122 (72%), Gaps = 6/122 (4%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKS------SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
M NK+G +LK S + S S+YQAIR MSSSKLFVGGLS+GTD+ SL++ F
Sbjct: 1 MAFVNKIGNMLKQIVSRHANLELCASRTSLYQAIRSMSSSKLFVGGLSWGTDETSLKEAF 60
Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERT 385
+++G+VIEA++I+DR++GRSRGFGF+++T +TA+DG+ L GR IRVN+A E+
Sbjct: 61 SQHGEVIEARVIMDRDTGRSRGFGFVSFTSTEEAASALTALDGQDLHGRQIRVNYATEKL 120
Query: 386 GG 391
G
Sbjct: 121 RG 122
>gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 128 bits (322), Expect = 9e-29
Identities = 66/124 (53%), Positives = 87/124 (70%), Gaps = 7/124 (5%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKS------SNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
M NK+G +LK+ + SN S++Q IR MSSSKLFVGGLSYGTD+ SL++ F
Sbjct: 1 MAFLNKIGNILKHGVGKNTNLELSASNGSLFQTIRSMSSSKLFVGGLSYGTDESSLKETF 60
Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE-R 382
++YG+VIEA++ILDRE+GRSRGFGFI++ + AMDG+ L GR I+VN+A E R
Sbjct: 61 SQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNYATEKR 120
Query: 383 TGGF 394
GF
Sbjct: 121 RDGF 124
>gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
Length = 146
Score = 128 bits (321), Expect = 1e-28
Identities = 62/115 (53%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
Frame = +2
Query: 44 MMLANKLGGLLKNAT--SSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
M NKLG LL+ SS + S+ +R MSSSKLF+GGLSYG DD SL+D FA YG
Sbjct: 1 MAFCNKLGNLLRQGATQSSHAPVSSMLNYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYG 60
Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
+V+EA++I DR++GRSRGFGF+ +T ++AMDG+ L+GRNIRV++AN+R
Sbjct: 61 EVVEARVITDRDTGRSRGFGFVNFTSDESATSALSAMDGQDLNGRNIRVSYANDR 115
>dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
Length = 144
Score = 127 bits (318), Expect = 3e-28
Identities = 69/125 (55%), Positives = 88/125 (70%), Gaps = 8/125 (6%)
Frame = +2
Query: 44 MMLANKLGGLLK-----NATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFA 208
M NKLGGLL+ NA S+ S S+ A+RCMS+ KLFVGGLS+GTDD SLRD FA
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPMPSMLDAVRCMST-KLFVGGLSWGTDDQSLRDAFA 59
Query: 209 KYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE--- 379
+G V++A++I+DR+SGRSRGFGF+ ++ I AMDG+ L GRNIRV+ A E
Sbjct: 60 TFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQERAP 119
Query: 380 RTGGF 394
R+GGF
Sbjct: 120 RSGGF 124
>dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
Length = 144
Score = 127 bits (318), Expect = 3e-28
Identities = 69/125 (55%), Positives = 87/125 (69%), Gaps = 8/125 (6%)
Frame = +2
Query: 44 MMLANKLGGLLK-----NATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFA 208
M NKLGGLL+ NA S+ S S+ A+RCMS+ KLFVGGLS+GTDD SLRD FA
Sbjct: 1 MAFYNKLGGLLRQSISGNAVSATSPMKSMLDAVRCMST-KLFVGGLSWGTDDQSLRDAFA 59
Query: 209 KYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE--- 379
+G V++A++I+DR+SGRSRGFGF+ ++ I AMDG+ L GRNIRV A E
Sbjct: 60 TFGDVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQERAP 119
Query: 380 RTGGF 394
R+GGF
Sbjct: 120 RSGGF 124
>ref|NP_177563.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAP13423.1| At1g74230 [Arabidopsis thaliana]
gb|AAG52402.1| putative RNA-binding protein; 37609-36098 [Arabidopsis thaliana]
gb|AAN72048.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 125 bits (314), Expect = 8e-28
Identities = 60/117 (51%), Positives = 84/117 (71%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M +K+G L +S +++ S+ Q+IRCMSSSK+FVGG+SY TD+ LR+ F+KYG+V
Sbjct: 1 MAFLSKVGRLFSQTSSHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 60
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGF 394
++AKII+DRE+GRSRGF F+T+T + +DG+ L GR IRVN+A ER GF
Sbjct: 61 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAM-QLDGQDLHGRRIRVNYATERGSGF 116
>gb|ABA40461.1| RNA binding protein-like protein [Solanum tuberosum]
gb|ABA40453.1| RNA binding protein-like protein [Solanum tuberosum]
Length = 150
Score = 124 bits (311), Expect = 2e-27
Identities = 64/119 (53%), Positives = 83/119 (69%), Gaps = 6/119 (5%)
Frame = +2
Query: 44 MMLANKLGGLLK------NATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEF 205
M NKLGGLL+ NA S+ S ++ AIRCMSS +LFVGGLS+GTDD SL++ F
Sbjct: 1 MAFCNKLGGLLRQSISTGNAASANSPTPAMLNAIRCMSS-RLFVGGLSWGTDDQSLKEAF 59
Query: 206 AKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
+G V++AK+I+DR+SGRSRGFGF+ ++ + AMDG+ L GRNIRVN A ER
Sbjct: 60 TSFGDVVDAKVIIDRDSGRSRGFGFVNFSDEDCAKEAMNAMDGQQLHGRNIRVNLAQER 118
>gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 124 bits (310), Expect = 2e-27
Identities = 58/117 (49%), Positives = 85/117 (72%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M +K+G + + ++ +++ S+ Q+IRCMSSSK+FVGG+SY TD+ LR+ F+KYG+V
Sbjct: 1 MAFLSKVGKIFRQTSAHVTASNSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 60
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGF 394
++AKII+DRE+GRSRGF F+T+T + +DG+ L GR IRVN+A ER GF
Sbjct: 61 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAM-QLDGQDLHGRRIRVNYATERGSGF 116
>ref|NP_849377.1| ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / nucleic
acid binding [Arabidopsis thaliana]
Length = 153
Score = 120 bits (300), Expect = 3e-26
Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
M NKLGGLL+ SS + S+ ++R MS+ KLF+GGLS+GTDD SLRD FA +G
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAFAHFG 59
Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
V++AK+I+DRE+GRSRGFGF+ + I+ MDGK L+GR+IRVN AN+R
Sbjct: 60 DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>emb|CAA05727.1| AtGRP2 [Arabidopsis thaliana]
Length = 150
Score = 120 bits (300), Expect = 3e-26
Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
M NKLGGLL+ SS + S+ ++R MS+ KLF+GGLS+GTDD SLRD FA +G
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAFAHFG 59
Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
V++AK+I+DRE+GRSRGFGF+ + I+ MDGK L+GR+IRVN AN+R
Sbjct: 60 DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>ref|NP_193121.1| ATGRP2 (GLYCINE-RICH RNA-BINDING PROTEIN 2); RNA binding / nucleic
acid binding [Arabidopsis thaliana]
emb|CAB78427.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
emb|CAB36849.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gb|AAL62353.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
gb|AAM62842.1| glycine-rich RNA-binding protein AtGRP2-like [Arabidopsis thaliana]
gb|AAN72208.1| glycine-rich RNA-binding protein AtGRP2 - like [Arabidopsis
thaliana]
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial precursor
(AtGRP2)
Length = 158
Score = 120 bits (300), Expect = 3e-26
Identities = 62/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
M NKLGGLL+ SS + S+ ++R MS+ KLF+GGLS+GTDD SLRD FA +G
Sbjct: 1 MAFCNKLGGLLRQNISSNGNVPVTSMLGSLRLMST-KLFIGGLSWGTDDASLRDAFAHFG 59
Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
V++AK+I+DRE+GRSRGFGF+ + I+ MDGK L+GR+IRVN AN+R
Sbjct: 60 DVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISEMDGKELNGRHIRVNPANDR 114
>gb|AAM01112.1| Putative RNA-binding protein [Oryza sativa]
Length = 119
Score = 119 bits (299), Expect = 4e-26
Identities = 56/99 (56%), Positives = 73/99 (73%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M K+G L++ + S S ++QA+RCMSSSKLF+GG+SYGTDD SL++ FA YG+V
Sbjct: 1 MAFLRKVGNLVRQSAGSGSP---LFQAVRCMSSSKLFIGGISYGTDDQSLKEAFANYGEV 57
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKT 340
IEA++I+DR +GRSRGFGF+TYT IT MDGKT
Sbjct: 58 IEARVIVDRTTGRSRGFGFVTYTSTDEAAAAITGMDGKT 96
>ref|NP_914833.1| putative glycine-rich RNA-binding protein 2 [Oryza sativa (japonica
cultivar-group)]
emb|CAA05729.1| OsGRP2 [Oryza sativa (japonica cultivar-group)]
dbj|BAB86134.1| OsGRP2 [Oryza sativa (japonica cultivar-group)]
dbj|BAB92683.1| OsGRP2 [Oryza sativa (japonica cultivar-group)]
Length = 150
Score = 112 bits (281), Expect = 5e-24
Identities = 60/122 (49%), Positives = 83/122 (68%), Gaps = 4/122 (3%)
Frame = +2
Query: 44 MMLANKLGGLLKNA----TSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAK 211
M NKLG L+++ ++S S+ +++ A R MS+ KLFVGGLS+ T+D SL++ F
Sbjct: 1 MAAFNKLGSFLRHSGLTSSASAGSSPAMFNAARLMST-KLFVGGLSWNTNDDSLKEAFTS 59
Query: 212 YGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGG 391
+G V EA++I DRESGRSRGFGF+++ + AMDGK L+GR+IRVN ANER G
Sbjct: 60 FGDVTEARVINDRESGRSRGFGFVSFANGDDAKSAMDAMDGKELEGRSIRVNFANERPPG 119
Query: 392 FR 397
R
Sbjct: 120 NR 121
>ref|NP_850629.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
ref|NP_189025.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM19890.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
gb|AAL50093.1| AT3g23830/F14O13_2 [Arabidopsis thaliana]
dbj|BAB03001.1| glycine-rich RNA binding protein-like [Arabidopsis thaliana]
Length = 136
Score = 111 bits (277), Expect = 2e-23
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
M NKL G+L+ S S+ S+ ++R MSS KLFVGGLS+GTDD SL+ F +G
Sbjct: 1 MAFCNKLSGILRQGVSQSSNGPVTSMLGSLRYMSS-KLFVGGLSWGTDDSSLKQAFTSFG 59
Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
+V EA +I DRE+GRSRGFGF++++ I MDGK L+GR IRVN A ER+ R
Sbjct: 60 EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 119
>gb|AAM63053.1| glycine-rich RNA binding protein, putative [Arabidopsis thaliana]
Length = 136
Score = 110 bits (276), Expect = 2e-23
Identities = 60/120 (50%), Positives = 78/120 (65%), Gaps = 2/120 (1%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSN--MSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYG 217
M NKL G+L+ S S+ S+ ++R MSS KLFVGGLS+GTDD SL+ F +G
Sbjct: 1 MAFCNKLSGILRQGVSHSSNGPVTSMLGSLRYMSS-KLFVGGLSWGTDDSSLKQAFTSFG 59
Query: 218 QVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
+V EA +I DRE+GRSRGFGF++++ I MDGK L+GR IRVN A ER+ R
Sbjct: 60 EVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKEMDGKELNGRQIRVNLATERSSAPR 119
>emb|CAA49174.1| glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 139
Score = 108 bits (270), Expect = 1e-22
Identities = 52/91 (57%), Positives = 70/91 (76%)
Frame = +2
Query: 110 SVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITY 289
S+ ++R MS+ KLF+GGLS+GTDD SLRD FA +G V++AK+I+DRE+GRSRGFGF+ +
Sbjct: 6 SMLGSLRLMST-KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNF 64
Query: 290 TXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
I+ MDGK L+GR+IRVN AN+R
Sbjct: 65 NDEGAATAAISEMDGKELNGRHIRVNPANDR 95
>dbj|BAC00787.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 155
Score = 100 bits (248), Expect = 3e-20
Identities = 50/122 (40%), Positives = 79/122 (64%), Gaps = 8/122 (6%)
Frame = +2
Query: 44 MMLANKLGGLLKNAT--------SSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRD 199
M +LGGL++ + SS ++ +++ R MS SKLFVGGL++GT D ++++
Sbjct: 1 MAFLAQLGGLVRQSIARNALQRHSSAAAIPAMFLVSRGMSGSKLFVGGLAWGTTDDNIKE 60
Query: 200 EFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE 379
F+ +G+V E KII DR++GRSRGFGF+T+ + A+DG+ L GR IRVN+A +
Sbjct: 61 AFSAFGEVTEVKIICDRDTGRSRGFGFVTFATDQDAEAALQALDGRDLAGRTIRVNYATK 120
Query: 380 RT 385
++
Sbjct: 121 QS 122
>gb|AAM16010.1| glycine-rich RNA binding protein [Zea mays]
Length = 147
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 11 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 70
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 71 MNGKELDGRNITVNEAQSRGG 91
>gb|AAB88616.1| glycine-rich RNA binding protein [Zea mays]
Length = 145
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRGG 89
>gb|AAM16002.1| glycine-rich RNA binding protein [Zea mays]
Length = 139
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 3 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 62
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 63 MNGKELDGRNITVNEAQSRGG 83
>gb|AAD48471.1| glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 99.4 bits (246), Expect = 6e-20
Identities = 45/82 (54%), Positives = 59/82 (71%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDH+L F++YG+++E KII DRE+GRSRGFGF+T+ I A
Sbjct: 9 RCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGA 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R GG
Sbjct: 69 MNGQNLDGRNITVNEAQSRGGG 90
>gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 78 MNGKELDGRNITVNEAQSRGG 98
>gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 78 MNGKELDGRNITVNEAQSRGG 98
>gb|AAM16000.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 19 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 79 MNGKELDGRNITVNEAQSRGG 99
>gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 19 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 78
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 79 MNGKELDGRNITVNEAQSRGG 99
>gb|AAM16013.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 13 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 72
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 73 MNGKELDGRNITVNEAQSRGG 93
>gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 72 MNGKELDGRNITVNEAQSRGG 92
>gb|AAM16025.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16024.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16017.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16008.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16004.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16001.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM15999.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 77
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 78 MNGKELDGRNITVNEAQSRGG 98
>gb|AAM16026.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16023.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 71
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 72 MNGKELDGRNITVNEAQSRGG 92
>gb|AAM16021.1| glycine-rich RNA binding protein [Zea mays]
Length = 150
Score = 99.4 bits (246), Expect = 6e-20
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 14 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEG 73
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 74 MNGKELDGRNITVNEAQSRGG 94
>gb|AAM16012.1| glycine-rich RNA binding protein [Zea mays]
Length = 153
Score = 99.0 bits (245), Expect = 8e-20
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 16 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXDAMRSAIEG 75
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 76 MNGKELDGRNITVNEAQSRGG 96
>gb|AAM16018.1| glycine-rich RNA binding protein [Zea mays]
gb|AAM16015.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 99.0 bits (245), Expect = 8e-20
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 78 MNGKELDGRNITVNEAQSRGG 98
>gb|AAM16019.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 99.0 bits (245), Expect = 8e-20
Identities = 47/81 (58%), Positives = 60/81 (74%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXEDAMRSAIEG 77
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 78 MNGKELDGRNITVNEAQSRGG 98
>gb|AAM16005.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 99.0 bits (245), Expect = 8e-20
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 78 MNGKELDGRNITVNEAQSRGG 98
>gb|AAM16006.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 99.0 bits (245), Expect = 8e-20
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 71
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 72 MNGKELDGRNITVNEAQSRGG 92
>gb|AAM16016.1| glycine-rich RNA binding protein [Zea mays]
Length = 154
Score = 98.6 bits (244), Expect = 1e-19
Identities = 51/81 (62%), Positives = 64/81 (79%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 18 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEG 77
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 78 MNGKELDGRNITVNEAQSRGG 98
>gb|AAM16014.1| glycine-rich RNA binding protein [Zea mays]
Length = 148
Score = 98.6 bits (244), Expect = 1e-19
Identities = 51/81 (62%), Positives = 64/81 (79%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 12 RCFVGGLAWATDDHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXXXRSAIEG 71
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 72 MNGKELDGRNITVNEAQSRGG 92
>emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 98.2 bits (243), Expect = 1e-19
Identities = 46/81 (56%), Positives = 59/81 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDHSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDDHSLHNAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRGG 89
>gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
gb|AAB63581.1| glycine-rich RNA binding protein 1 [Pelargonium x hortorum]
Length = 166
Score = 97.4 bits (241), Expect = 2e-19
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDH+L F++YG+V+E+KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEKSMNDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 69 MNGQNLDGRNITVNEAQSRGSG 90
>gb|AAB07749.1| low temperature-responsive RNA-binding protein
Length = 161
Score = 96.7 bits (239), Expect = 4e-19
Identities = 48/87 (55%), Positives = 60/87 (68%), Gaps = 4/87 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL + TDD SL++ F+KYG VI++KII DRE+GRSRGFGF+T+ I A
Sbjct: 7 RCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEA 66
Query: 326 MDGKTLDGRNIRVNHANERT----GGF 394
M+G+ LDGRNI VN A R GGF
Sbjct: 67 MNGQDLDGRNITVNEAQSRRSDGGGGF 93
>gb|AAM16020.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 96.3 bits (238), Expect = 5e-19
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TD HSL + F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I
Sbjct: 18 RCFVGGLAWATDXHSLNNAFSTYGEVLESKIILDRETQRSRGFGFVTFSXXXAMRSAIEG 77
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+GK LDGRNI VN A R G
Sbjct: 78 MNGKELDGRNITVNEAQSRGG 98
>gb|AAD28176.1| glycine-rich RNA-binding protein [Picea glauca]
Length = 155
Score = 95.9 bits (237), Expect = 7e-19
Identities = 45/82 (54%), Positives = 59/82 (71%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL++ F+ YG+V+E+KII DRE+GRSRGFGF+T+ I A
Sbjct: 9 RCFVGGLAWSTDDRSLQEAFSPYGEVVESKIISDRETGRSRGFGFVTFNDEQSMRDAIDA 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGR+I VN A R G
Sbjct: 69 MNGKMLDGRSITVNPAQSRGNG 90
>gb|AAB65412.1| glycine-rich protein [Oryza sativa]
Length = 161
Score = 95.1 bits (235), Expect = 1e-18
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRRSG 90
>emb|CAC83314.1| glycine rich RNA binding protein [Oryza sativa (indica
cultivar-group)]
Length = 194
Score = 95.1 bits (235), Expect = 1e-18
Identities = 44/82 (53%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRRSG 90
>emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 95.1 bits (235), Expect = 1e-18
Identities = 45/82 (54%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YGQV+E+KII DRE+GRSRGFGF+T++ I
Sbjct: 8 RCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 67
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 68 MNGQDLDGRNITVNEAQSRGSG 89
>gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 94.7 bits (234), Expect = 1e-18
Identities = 43/82 (52%), Positives = 59/82 (71%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD++L+ F++YG++++AKII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATDDNNLQQAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 67 MNGKELDGRNITVNEAQSRRSG 88
>gb|AAC41383.1| RNA-binding protein AxRNBP [Ambystoma mexicanum]
Length = 144
Score = 94.4 bits (233), Expect = 2e-18
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 3/91 (3%)
Frame = +2
Query: 134 MSSS---KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXX 304
MSSS KLFVGGLS+ +++HSL F+KYG V +A ++ DRE+GRSRGFGF+T+
Sbjct: 1 MSSSDEGKLFVGGLSFDSNEHSLESAFSKYGDVCDAVVVKDRETGRSRGFGFVTFRNPSD 60
Query: 305 XXXXITAMDGKTLDGRNIRVNHANERTGGFR 397
+ AM+G++LDGR IRV+ A + +GG R
Sbjct: 61 AKEALHAMNGESLDGRQIRVDLAGKSSGGGR 91
>gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 162
Score = 94.0 bits (232), Expect = 2e-18
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRRSG 90
>emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein
prf||1410284A abscisic acid inducible gene
Length = 157
Score = 94.0 bits (232), Expect = 2e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T + SL + FA YG+++++K+I DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIEN 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R GG
Sbjct: 69 MNGKELDGRNITVNQAQSRGGG 90
>gb|ABA99935.1| glycine-rich RNA-binding protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 162
Score = 93.6 bits (231), Expect = 3e-18
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ +G+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRRSG 90
>emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2
Length = 168
Score = 93.6 bits (231), Expect = 3e-18
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T++ +L FA +GQVI++K+I DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R GG
Sbjct: 69 MNGKELDGRNITVNQAQSRGGG 90
>emb|CAA05728.1| OsGRP1 [Oryza sativa (japonica cultivar-group)]
Length = 160
Score = 93.6 bits (231), Expect = 3e-18
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ +G+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRRSG 90
>gb|AAF31404.1| putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 93.6 bits (231), Expect = 3e-18
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D SL + F++YG+V+E+K+I DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEKSMKDAIVG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+TLDGRNI VN A R G
Sbjct: 69 MNGQTLDGRNITVNEAQSRGSG 90
>gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 93.6 bits (231), Expect = 3e-18
Identities = 43/82 (52%), Positives = 59/82 (71%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D++L + F++YG+V+E+KII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATTDNTLSEAFSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R GG
Sbjct: 67 MNGQDLDGRNITVNEAQSRGGG 88
>gb|AAF31403.1| putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 93.6 bits (231), Expect = 3e-18
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D SL + F++YG+++E+KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQSMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+TLDGRNI VN A R G
Sbjct: 69 MNGQTLDGRNITVNEAQSRGSG 90
>gb|AAB66885.1| glycine-rich protein [Oryza sativa]
Length = 161
Score = 93.2 bits (230), Expect = 4e-18
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TD+ SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRRSG 90
>emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 93.2 bits (230), Expect = 4e-18
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D +L + F+ YG+V+E+KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R GG
Sbjct: 69 MNGQNLDGRNITVNEAQSRGGG 90
>gb|AAF31402.1| putative glycine-rich RNA binding protein 1 [Catharanthus roseus]
Length = 137
Score = 93.2 bits (230), Expect = 4e-18
Identities = 43/82 (52%), Positives = 58/82 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D SL + F++YG+V+E+KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATTDQSLSEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMKDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+TLDGRN+ VN A R G
Sbjct: 69 MNGQTLDGRNVTVNEAQSRGSG 90
>gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa]
Length = 165
Score = 92.8 bits (229), Expect = 6e-18
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TD+ SL F+ YG+++E+KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDNRSLEAAFSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M GK LDGRNI VN A R G
Sbjct: 69 MSGKELDGRNITVNEAQSRRSG 90
>gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 92.4 bits (228), Expect = 7e-18
Identities = 42/82 (51%), Positives = 58/82 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T++ +L FA +GQV+++K+I DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATNNETLEHAFANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIEN 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R GG
Sbjct: 69 MNGKELDGRNITVNQAQSRGGG 90
>emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 92.0 bits (227), Expect = 9e-18
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDDH+L+ F++YG++++AKII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATDDHNLQAAFSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEE 66
Query: 326 MDGKTLDGRNIRVNHANER 382
M+GK LDGR + VN A R
Sbjct: 67 MNGKELDGRQVTVNEAQSR 85
>gb|AAB66884.1| glycine-rich protein [Oryza sativa]
Length = 162
Score = 91.7 bits (226), Expect = 1e-17
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD SL F+ YG+++++KII DRE+GRS GFGFIT++ I
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R G
Sbjct: 69 MNGKELDGRNITVNEAQSRRSG 90
>dbj|BAE58923.1| unnamed protein product [Aspergillus oryzae]
Length = 125
Score = 90.9 bits (224), Expect = 2e-17
Identities = 42/86 (48%), Positives = 61/86 (70%)
Frame = +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
MSS+K++VG LS+ T+D SLR F+++G V++A ++ DRE+GRSRGFGF+T++
Sbjct: 1 MSSAKVYVGNLSWNTNDESLRQTFSEFGNVLDAIVMKDRETGRSRGFGFVTFSAQTEADA 60
Query: 314 XITAMDGKTLDGRNIRVNHANERTGG 391
I ++ + LDGR IRVN AN R G
Sbjct: 61 AIGGLNEQELDGRRIRVNLANARPAG 86
>dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 90.9 bits (224), Expect = 2e-17
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D SL + F +G+V++ K+I DRE+GRSRGFGF+T+ I
Sbjct: 6 RCFVGGLAWATTDGSLEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKD 65
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGRNI VN A R GG
Sbjct: 66 MNGKELDGRNITVNQAQSRGGG 87
>gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 90.5 bits (223), Expect = 3e-17
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD +L FA+YG VI++KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGR+I VN A R G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>ref|NP_850017.1| ATGRP7; RNA binding [Arabidopsis thaliana]
Length = 159
Score = 90.5 bits (223), Expect = 3e-17
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD +L FA+YG VI++KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGR+I VN A R G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>ref|NP_179760.1| ATGRP7; RNA binding [Arabidopsis thaliana]
emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gb|AAL16149.1| At2g22292/F2G1.7_ [Arabidopsis thaliana]
gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7
gb|AAA32853.1| RNA-binding protein
Length = 176
Score = 90.5 bits (223), Expect = 3e-17
Identities = 43/82 (52%), Positives = 56/82 (68%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD +L FA+YG VI++KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGR+I VN A R G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>ref|NP_001017228.1| hypothetical protein LOC549982 [Xenopus tropicalis]
emb|CAJ83306.1| cold inducible RNA binding protein [Xenopus tropicalis]
Length = 166
Score = 90.5 bits (223), Expect = 3e-17
Identities = 45/88 (51%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ T + SL F+KYGQV E ++ DRES RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A N+R GG+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSNDRRGGYR 94
>dbj|BAA88978.1| BFCIRP [Rana catesbeiana]
Length = 164
Score = 90.5 bits (223), Expect = 3e-17
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ TD+ L F+KYGQ+ E ++ DRE+ RSRGFGF+T+ +
Sbjct: 7 KLFVGGLSFDTDEQCLETVFSKYGQIQEVVVVKDRETKRSRGFGFVTFENCEDAKDAMAG 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GKT+DGR IRV+ A N+R GG+R
Sbjct: 67 MNGKTVDGRQIRVDQAGKSSNDRRGGYR 94
>gb|AAF06329.1| glycine-rich RNA binding protein [Medicago sativa]
Length = 105
Score = 90.5 bits (223), Expect = 3e-17
Identities = 41/82 (50%), Positives = 58/82 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TD+ +L F++YG+++++KII DRE+GRSRGFGF+T+ I A
Sbjct: 7 RCFVGGLAWATDNDALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDVIEA 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 67 MNGQDLDGRNITVNQAQSRGSG 88
>emb|CAA43428.1| 29kD B ribonucleoprotein [Nicotiana sylvestris]
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)
Length = 291
Score = 90.1 bits (222), Expect = 4e-17
Identities = 40/82 (48%), Positives = 62/82 (75%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS++++VG LS+G DD +L++ F++ G V++AK++ DR+SGRSRGFGF+TY+
Sbjct: 205 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSSKEVNDA 264
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I +++G LDGR+IRV+ A ER
Sbjct: 265 IDSLNGVDLDGRSIRVSAAEER 286
Score = 59.3 bits (142), Expect = 7e-08
Identities = 32/88 (36%), Positives = 46/88 (52%)
Frame = +2
Query: 104 NMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFI 283
++ V + R KLFVG L + D +L F + G V ++I D+ +GRSRGFGF+
Sbjct: 74 DVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGFV 133
Query: 284 TYTXXXXXXXXITAMDGKTLDGRNIRVN 367
T + +G +DGR IRVN
Sbjct: 134 TMSTKEEVEAAEQQFNGYEIDGRAIRVN 161
>emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 90.1 bits (222), Expect = 4e-17
Identities = 42/80 (52%), Positives = 55/80 (68%)
Frame = +2
Query: 152 FVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMD 331
FVGGL++ T D +L D F+ YG+V+++KII DRE+GRSRGFGF+T+ I+ M+
Sbjct: 10 FVGGLAWATTDRTLSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAISGMN 69
Query: 332 GKTLDGRNIRVNHANERTGG 391
G LDGRNI VN A R G
Sbjct: 70 GSELDGRNITVNEAQARGSG 89
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 90.1 bits (222), Expect = 4e-17
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D SL + F+ YG ++E+KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 69 MNGQNLDGRNITVNEAQSRGSG 90
>gb|AAH86491.1| Rbm3 protein [Mus musculus]
Length = 128
Score = 90.1 bits (222), Expect = 4e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>gb|AAH06580.1| Rbm3 protein [Mus musculus]
dbj|BAE21846.1| unnamed protein product [Mus musculus]
dbj|BAE32335.1| unnamed protein product [Mus musculus]
dbj|BAE39828.1| unnamed protein product [Mus musculus]
dbj|BAB22957.1| unnamed protein product [Mus musculus]
dbj|BAB24981.1| unnamed protein product [Mus musculus]
gb|AAL10707.1| RNA-binding motif protein 3 [Mus musculus]
sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 (RNA-binding motif protein 3)
gb|AAI06177.1| Rbm3 protein [Mus musculus]
dbj|BAA32060.1| rbm3 [Mus musculus]
Length = 153
Score = 90.1 bits (222), Expect = 4e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>ref|XP_343774.2| PREDICTED: RNA binding motif (RNP1, RRM) protein 3 [Rattus
norvegicus]
Length = 156
Score = 90.1 bits (222), Expect = 4e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 90.1 bits (222), Expect = 4e-17
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D +L D F++YG+++++KII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 67 MNGQDLDGRNITVNEAQSRGSG 88
>ref|NP_006734.1| RNA binding motif protein 3 isoform a [Homo sapiens]
gb|AAH06825.1| RNA binding motif (RNP1, RRM) protein 3 [Homo sapiens]
sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 (RNA-binding motif protein 3) (RNPL)
gb|AAB17212.1| RNPL
Length = 157
Score = 90.1 bits (222), Expect = 4e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>gb|AAK39523.1| RNA-binding motif protein 3 [Rattus norvegicus]
Length = 127
Score = 90.1 bits (222), Expect = 4e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>gb|AAH59098.1| Rbm3 protein [Mus musculus]
dbj|BAC40108.1| unnamed protein product [Mus musculus]
dbj|BAC33821.1| unnamed protein product [Mus musculus]
ref|NP_058089.2| RNA binding motif protein 3 [Mus musculus]
Length = 154
Score = 90.1 bits (222), Expect = 4e-17
Identities = 41/84 (48%), Positives = 58/84 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>dbj|BAB92955.1| cold inducible RNA-binding protein alpha [Hyla japonica]
Length = 162
Score = 89.7 bits (221), Expect = 5e-17
Identities = 47/95 (49%), Positives = 63/95 (66%), Gaps = 7/95 (7%)
Frame = +2
Query: 134 MSSS---KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXX 304
MSSS KLFVGGLS+ T++ SL F KYGQ+ E ++ DRE+ RSRGFGF+T+
Sbjct: 1 MSSSDEGKLFVGGLSFDTEEQSLEQVFGKYGQISEVVVVKDRETKRSRGFGFVTFENPED 60
Query: 305 XXXXITAMDGKTLDGRNIRVNHA----NERTGGFR 397
+ AM+GK++DGR IRV+ A +R GG+R
Sbjct: 61 AKDAMEAMNGKSVDGRQIRVDQAGKSSGDRRGGYR 95
>gb|AAO32675.1| hyperosmotic glycine rich protein [Salmo salar]
Length = 205
Score = 89.7 bits (221), Expect = 5e-17
Identities = 42/84 (50%), Positives = 57/84 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T + SL + F+KYG + + +I+DRE+GR RGFGF+ Y + A
Sbjct: 6 KLFVGGLSFDTTEQSLAEAFSKYGNISKCDVIMDRETGRPRGFGFVKYDNPEDAKDAMDA 65
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRVN A + GG R
Sbjct: 66 MNGQSLDGRTIRVNEAGQGGGGGR 89
>emb|CAA46233.1| RNA binding protein 31 [Nicotiana plumbaginifolia]
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplast precursor (CP-RBP31)
Length = 292
Score = 89.7 bits (221), Expect = 5e-17
Identities = 40/82 (48%), Positives = 62/82 (75%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS++++VG LS+G DD +L++ F++ G V++AK++ DR+SGRSRGFGF+TY+
Sbjct: 206 SSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDA 265
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I +++G LDGR+IRV+ A ER
Sbjct: 266 IDSLNGIDLDGRSIRVSAAEER 287
Score = 60.1 bits (144), Expect = 4e-08
Identities = 33/88 (37%), Positives = 46/88 (52%)
Frame = +2
Query: 104 NMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFI 283
++ V + R KLFVG L + D +L F + G V ++I D+ SGRSRGFGF+
Sbjct: 75 DVEVAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEIVEVIYDKLSGRSRGFGFV 134
Query: 284 TYTXXXXXXXXITAMDGKTLDGRNIRVN 367
T + +G +DGR IRVN
Sbjct: 135 TMSTKEEVEAAEQQFNGYEIDGRAIRVN 162
>dbj|BAA03743.1| RNA-binding gricine-rich protein-1 (RGP-1c) [Nicotiana sylvestris]
Length = 165
Score = 89.7 bits (221), Expect = 5e-17
Identities = 42/82 (51%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D +L + F++YG+V+E+KII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIEG 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 67 MNGQDLDGRNITVNEAQSRGSG 88
>ref|NP_189273.1| ARRZ-1A; RNA binding / nucleotide binding [Arabidopsis thaliana]
dbj|BAD93728.1| RNA-binding protein [Arabidopsis thaliana]
gb|AAL66872.1| unknown protein [Arabidopsis thaliana]
gb|AAL11606.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gb|AAK96804.1| Unknown protein [Arabidopsis thaliana]
dbj|BAB02203.1| unnamed protein product [Arabidopsis thaliana]
Length = 245
Score = 89.7 bits (221), Expect = 5e-17
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ F+GGL++ T D LRD F KYG ++EAK++LD+ SGRSRGFGFIT+ I A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G LDGR I V+ A GG
Sbjct: 68 MNGMDLDGRTITVDKAQPHQGG 89
>gb|AAL90956.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
gb|AAL09710.1| AT3g26420/F20C19_14 [Arabidopsis thaliana]
Length = 148
Score = 89.7 bits (221), Expect = 5e-17
Identities = 42/82 (51%), Positives = 54/82 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ F+GGL++ T D LRD F KYG ++EAK++LD+ SGRSRGFGFIT+ I A
Sbjct: 8 RCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKAMDEAIAA 67
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G LDGR I V+ A GG
Sbjct: 68 MNGMDLDGRTITVDKAQPHQGG 89
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A
gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue
Length = 166
Score = 89.4 bits (220), Expect = 6e-17
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TDD +L F++YG+V+++KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGR+I VN A R G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>ref|XP_863171.1| PREDICTED: similar to RNA binding motif protein 3 isoform 2 [Canis
familiaris]
Length = 162
Score = 89.4 bits (220), Expect = 6e-17
Identities = 41/84 (48%), Positives = 57/84 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTR 90
>dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
Length = 244
Score = 89.0 bits (219), Expect = 8e-17
Identities = 47/116 (40%), Positives = 73/116 (62%)
Frame = +2
Query: 32 QLGTMMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAK 211
Q +M KLGG K + S+M ++R MS+ KL++GGLS GTD+HSL+D F+
Sbjct: 29 QASSMAFCTKLGGHWKQGVNVPVSSM--LGSLRYMST-KLYIGGLSPGTDEHSLKDAFSS 85
Query: 212 YGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE 379
+ V EA+++ ++ +GRSRG+GF+ + I+AM+G+ L+G NI VN A +
Sbjct: 86 FNGVTEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKD 141
>gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 89.0 bits (219), Expect = 8e-17
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TD+ +L F+ +G++IE+KII DRE+GRSRGFGF+T++ I
Sbjct: 9 RCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 69 MNGQNLDGRNITVNEAQSRGSG 90
>ref|NP_956311.1| cold inducible RNA binding protein [Danio rerio]
gb|AAH48027.1| Cold inducible RNA binding protein [Danio rerio]
Length = 184
Score = 88.6 bits (218), Expect = 1e-16
Identities = 43/87 (49%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGLSY T + SL + F+KYG + + +I DRE+ RSRGFGF+T+ + A
Sbjct: 6 KLFIGGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAA 65
Query: 326 MDGKTLDGRNIRVNHANE---RTGGFR 397
M+GK +DGR IRV+ A + R+GGFR
Sbjct: 66 MNGKQVDGRMIRVDEAGKSGGRSGGFR 92
>dbj|BAB92956.1| cold inducible RNA-binding protein beta [Hyla japonica]
Length = 166
Score = 88.6 bits (218), Expect = 1e-16
Identities = 46/95 (48%), Positives = 63/95 (66%), Gaps = 7/95 (7%)
Frame = +2
Query: 134 MSSS---KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXX 304
MSSS KLFVGGLS+ T++ +L F KYGQ+ E ++ DRE+ RSRGFGF+T+
Sbjct: 1 MSSSDEGKLFVGGLSFDTEEQNLEQVFGKYGQISEVVVVKDRETQRSRGFGFVTFENPED 60
Query: 305 XXXXITAMDGKTLDGRNIRVNHA----NERTGGFR 397
+ AM+GK++DGR IRV+ A +R GG+R
Sbjct: 61 AKDAMEAMNGKSVDGRQIRVDQAGKSSGDRRGGYR 95
>gb|AAM62588.1| glycine-rich RNA-binding protein, putative [Arabidopsis thaliana]
Length = 152
Score = 88.2 bits (217), Expect = 1e-16
Identities = 46/116 (39%), Positives = 71/116 (61%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M L ++ G + + + ++SN ++ Q ++ SK+FVGGLS TD L++ F +G++
Sbjct: 1 MGLFSRAGNIFRQPRALQASN-AMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKI 59
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGG 391
++A ++LDRESG SRGFGF+TY + AM K LDGR I V+ A+ GG
Sbjct: 60 VDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPADSGGGG 115
>ref|NP_173298.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAF98412.1| Similar to glycine-rich RNA-binding proteins [Arabidopsis thaliana]
gb|AAO64934.1| At1g18630 [Arabidopsis thaliana]
Length = 155
Score = 88.2 bits (217), Expect = 1e-16
Identities = 46/116 (39%), Positives = 71/116 (61%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M L ++ G + + + ++SN ++ Q ++ SK+FVGGLS TD L++ F +G++
Sbjct: 4 MGLFSRAGNIFRQPRALQASN-AMLQGNLSLTPSKIFVGGLSPSTDVELLKEAFGSFGKI 62
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGG 391
++A ++LDRESG SRGFGF+TY + AM K LDGR I V+ A+ GG
Sbjct: 63 VDAVVVLDRESGLSRGFGFVTYDSIEVANNAMQAMQNKELDGRIIGVHPADSGGGG 118
>gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 88.2 bits (217), Expect = 1e-16
Identities = 40/82 (48%), Positives = 56/82 (68%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D SL++ F+ YG+++++KII DRE+GRSRGFGF+T+ I
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+ + LDGRNI VN A R G
Sbjct: 68 MNSQELDGRNITVNEAQSRGSG 89
>ref|NP_920649.1| putative RNA-binding protein [Oryza sativa (japonica
cultivar-group)]
gb|AAN04953.1| Putative RNA-binding protein [Oryza sativa (japonica
cultivar-group)]
gb|AAP52936.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain), putative
[Oryza sativa (japonica cultivar-group)]
Length = 147
Score = 87.8 bits (216), Expect = 2e-16
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = +2
Query: 119 QAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXX 298
QA+R + + + GG+SYGTDD SL++ FA YG+VIEA++I+DR +GRSRGFGF+TYT
Sbjct: 54 QAVRRLGLAAV-PGGISYGTDDQSLKEAFANYGEVIEARVIVDRTTGRSRGFGFVTYTST 112
Query: 299 XXXXXXITAMDGK 337
IT MDGK
Sbjct: 113 DEAAAAITGMDGK 125
>emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10
Length = 169
Score = 87.4 bits (215), Expect = 2e-16
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D L F+++G+VI++KII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDE 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGR I VN A R GG
Sbjct: 67 MNGKELDGRTITVNEAQSRGGG 88
>ref|XP_868602.1| PREDICTED: similar to cold inducible RNA binding protein isoform 4
[Canis familiaris]
Length = 219
Score = 87.4 bits (215), Expect = 2e-16
Identities = 45/105 (42%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Frame = +2
Query: 95 KSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGF 274
+SS +A KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGF
Sbjct: 37 ESSQAHHGKATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGF 96
Query: 275 GFITYTXXXXXXXXITAMDGKTLDGRNIRVNHA----NERTGGFR 397
GF+T+ + AM+GK++DGR IRV+ A + R+ G+R
Sbjct: 97 GFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGKSSDNRSRGYR 141
>dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
Length = 162
Score = 87.0 bits (214), Expect = 3e-16
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D L F +G+V+++K+I DRE+GRSRGFGF+T+ I
Sbjct: 8 RCFVGGLAWATTDGRLEGAFRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAIKE 67
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R GG
Sbjct: 68 MNGQELDGRNITVNQAQSRGGG 89
>emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 87.0 bits (214), Expect = 3e-16
Identities = 41/81 (50%), Positives = 55/81 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D +L D F++Y +V+E+KII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATTDQTLSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEG 66
Query: 326 MDGKTLDGRNIRVNHANERTG 388
M+ + LDGRNI VN A R G
Sbjct: 67 MNRQDLDGRNITVNEAQSRGG 87
>dbj|BAA03741.1| RNA-binding glycine-rich protein-1 (RGP-1a) [Nicotiana sylvestris]
Length = 156
Score = 87.0 bits (214), Expect = 3e-16
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D +L + F+++G+++++KII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEG 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 67 MNGQDLDGRNITVNEAQSRGSG 88
>emb|CAA41152.1| glycine-rich protein [Daucus carota]
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein
prf||1908438A Gly-rich protein
Length = 157
Score = 87.0 bits (214), Expect = 3e-16
Identities = 40/82 (48%), Positives = 55/82 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T+D SL F+++G + ++KII DRE+GRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEG 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI VN A R G
Sbjct: 67 MNGQELDGRNITVNEAQSRGSG 88
>emb|CAA54965.1| mitochondrial ribosomal protein S19, nuclear encoded [Arabidopsis
thaliana]
emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
Length = 212
Score = 87.0 bits (214), Expect = 3e-16
Identities = 46/112 (41%), Positives = 71/112 (63%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M KLGG K + S+M ++R MS+ KL++GGLS GTD+HSL+D F+ + V
Sbjct: 1 MAFCTKLGGHWKQGVNVPVSSM--LGSLRYMST-KLYIGGLSPGTDEHSLKDAFSSFNGV 57
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE 379
EA+++ ++ +GRSRG+GF+ + I+AM+G+ L+G NI VN A +
Sbjct: 58 TEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKD 109
>ref|NP_568681.1| RPS19; RNA binding [Arabidopsis thaliana]
gb|AAM14293.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
gb|AAK76637.1| putative 40S ribosomal protein S19 [Arabidopsis thaliana]
sp|P39697|RT19_ARATH 40S ribosomal protein S19, mitochondrial precursor
Length = 212
Score = 87.0 bits (214), Expect = 3e-16
Identities = 46/112 (41%), Positives = 71/112 (63%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M KLGG K + S+M ++R MS+ KL++GGLS GTD+HSL+D F+ + V
Sbjct: 1 MAFCTKLGGHWKQGVNVPVSSM--LGSLRYMST-KLYIGGLSPGTDEHSLKDAFSSFNGV 57
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE 379
EA+++ ++ +GRSRG+GF+ + I+AM+G+ L+G NI VN A +
Sbjct: 58 TEARVMTNKVTGRSRGYGFVNFISEDSANSAISAMNGQELNGFNISVNVAKD 109
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 86.7 bits (213), Expect = 4e-16
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
S ++++VG LS+G DD +L F++ G+V+EA++I DR+SGRS+GFGF+TY
Sbjct: 202 SGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNA 261
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I ++DG LDGR IRV+ A R
Sbjct: 262 IKSLDGADLDGRQIRVSEAEAR 283
Score = 58.9 bits (141), Expect = 9e-08
Identities = 30/74 (40%), Positives = 39/74 (52%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVG L + D L F G V ++I D+ +GRSRGFGF+T +
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 326 MDGKTLDGRNIRVN 367
+G LDGR +RVN
Sbjct: 152 FNGYELDGRPLRVN 165
>ref|NP_181259.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAL15235.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAK43982.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAM15222.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAC98043.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAK82513.1| At2g37220/F3G5.1 [Arabidopsis thaliana]
sp|Q9ZUU4|ROC1_ARATH Putative ribonucleoprotein At2g37220, chloroplast precursor
Length = 289
Score = 86.7 bits (213), Expect = 4e-16
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
S ++++VG LS+G DD +L F++ G+V+EA++I DR+SGRS+GFGF+TY
Sbjct: 202 SGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNA 261
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I ++DG LDGR IRV+ A R
Sbjct: 262 IKSLDGADLDGRQIRVSEAEAR 283
Score = 58.9 bits (141), Expect = 9e-08
Identities = 30/74 (40%), Positives = 39/74 (52%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVG L + D L F G V ++I D+ +GRSRGFGF+T +
Sbjct: 92 KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQ 151
Query: 326 MDGKTLDGRNIRVN 367
+G LDGR +RVN
Sbjct: 152 FNGYELDGRPLRVN 165
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A
gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue
Length = 169
Score = 86.7 bits (213), Expect = 4e-16
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TD+ SL F+++G+++++KII DRE+GRSRGFGF+T+ I
Sbjct: 9 RCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEG 68
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGR+I VN A R G
Sbjct: 69 MNGQDLDGRSITVNEAQSRGSG 90
>gb|AAH54250.1| Xcirp2 protein [Xenopus laevis]
dbj|BAB19129.1| cold-inducible RNA binding protein 2 [Xenopus laevis]
Length = 166
Score = 86.7 bits (213), Expect = 4e-16
Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL++ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 6 KLFIGGLNFDTNEESLEQVFSKYGQISEVVVVKDRETKRSRGFGFVTFENPDDAKDAMMA 65
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK +DGR IRV+ A +R GG+R
Sbjct: 66 MNGKAVDGRQIRVDQAGKSSGDRRGGYR 93
>ref|NP_001271.1| cold inducible RNA binding protein [Homo sapiens]
gb|AAH00901.1| Cold inducible RNA binding protein [Homo sapiens]
gb|AAH00403.1| Cold inducible RNA binding protein [Homo sapiens]
emb|CAH89574.1| hypothetical protein [Pongo pygmaeus]
gb|AAP35874.1| cold inducible RNA binding protein [Homo sapiens]
dbj|BAE01608.1| unnamed protein product [Macaca fascicularis]
gb|AAX32049.1| cold inducible RNA binding protein [synthetic construct]
sp|Q14011|CIRBP_HUMAN Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP)
gb|AAC51787.1| DNA damage-inducible RNA binding protein [Homo sapiens]
gb|AAC04895.1| CIRP [Homo sapiens]
dbj|BAA11212.1| CIRP [Homo sapiens]
Length = 172
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYR 94
>gb|AAZ38826.1| aggrecan promoter binding protein [Gallus gallus]
Length = 172
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHANE----RTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGYR 94
>ref|XP_533961.1| PREDICTED: similar to cold inducible RNA binding protein isoform 1
[Canis familiaris]
Length = 172
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYR 94
>ref|NP_849523.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA binding / nucleic acid binding
[Arabidopsis thaliana]
Length = 126
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T+D L+ F+++G VI++KII DRESGRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGR I VN A R G
Sbjct: 67 MNGKELDGRVITVNEAQSRGSG 88
>gb|AAP36943.1| Homo sapiens cold inducible RNA binding protein [synthetic
construct]
gb|AAX43685.1| cold inducible RNA binding protein [synthetic construct]
gb|AAX43684.1| cold inducible RNA binding protein [synthetic construct]
Length = 173
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYR 94
>gb|AAI02774.1| Hypothetical protein LOC507120 [Bos taurus]
ref|NP_001029450.1| hypothetical protein LOC507120 [Bos taurus]
Length = 213
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYR 94
>ref|XP_868600.1| PREDICTED: similar to cold inducible RNA binding protein isoform 2
[Canis familiaris]
Length = 185
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYR 94
>ref|NP_001026518.1| cold inducible RNA binding protein [Gallus gallus]
emb|CAG31295.1| hypothetical protein [Gallus gallus]
Length = 190
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHANE----RTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSENRSRGYR 94
>ref|NP_195637.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA binding / nucleic acid binding
[Arabidopsis thaliana]
emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 (CCR1 protein)
gb|AAA32854.1| RNA-binding protein
gb|AAA20201.1| ORF
Length = 169
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T+D L+ F+++G VI++KII DRESGRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGR I VN A R G
Sbjct: 67 MNGKELDGRVITVNEAQSRGSG 88
>gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 86.3 bits (212), Expect = 5e-16
Identities = 39/82 (47%), Positives = 55/82 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T D SL++ F+ YG+++++KII DRE+GRSRGFGF+T+ I
Sbjct: 8 RCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQG 67
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+ + LDGRN VN A R G
Sbjct: 68 MNSQELDGRNTTVNEAQSRGNG 89
>ref|XP_868601.1| PREDICTED: similar to cold inducible RNA binding protein isoform 3
[Canis familiaris]
Length = 164
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYR 94
>ref|NP_849524.1| ATGRP8 (GLYCINE-RICH PROTEIN 8); RNA binding / nucleic acid binding
[Arabidopsis thaliana]
Length = 92
Score = 86.3 bits (212), Expect = 5e-16
Identities = 42/82 (51%), Positives = 55/82 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ T+D L+ F+++G VI++KII DRESGRSRGFGF+T+ I
Sbjct: 7 RCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEE 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK LDGR I VN A R G
Sbjct: 67 MNGKELDGRVITVNEAQSRGSG 88
>dbj|BAA03742.1| RNA-binding glycine-rich protein-1 (RGP-1b) [Nicotiana sylvestris]
Length = 148
Score = 86.3 bits (212), Expect = 5e-16
Identities = 41/80 (51%), Positives = 54/80 (67%)
Frame = +2
Query: 152 FVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMD 331
FVGGL++ T D +L D F YG+V+++KII DRE+GRSRGFGF+T+ I M+
Sbjct: 9 FVGGLAWATTDRTLADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAIEGMN 68
Query: 332 GKTLDGRNIRVNHANERTGG 391
G+ LDGR+I VN A R G
Sbjct: 69 GQELDGRSITVNEAQARGSG 88
>ref|NP_917982.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa (japonica cultivar-group)]
dbj|BAC10140.1| putative 29 kDa ribonucleoprotein A, chloroplast precursor [Oryza
sativa (japonica cultivar-group)]
Length = 264
Score = 85.9 bits (211), Expect = 7e-16
Identities = 41/82 (50%), Positives = 57/82 (69%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS+KL+VG L++G D+ +L + F++ G V++AK+I DRESGRSRGFGF+TY
Sbjct: 178 SSNKLYVGNLAWGVDNSTLENLFSEQGTVLDAKVIYDRESGRSRGFGFVTYGSAEEVNNA 237
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I+ +DG LDGR IRV A +
Sbjct: 238 ISNLDGVDLDGRQIRVTVAESK 259
Score = 60.8 bits (146), Expect = 2e-08
Identities = 28/74 (37%), Positives = 41/74 (55%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
K+FVG L + D L F + G V +++ DR++GRSRGFGF+T + +
Sbjct: 81 KVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVVYDRQTGRSRGFGFVTMSTAEEAGAAVEQ 140
Query: 326 MDGKTLDGRNIRVN 367
+G T GR +RVN
Sbjct: 141 FNGYTFQGRPLRVN 154
>ref|NP_187457.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAS88763.1| At3g08000 [Arabidopsis thaliana]
gb|AAS76213.1| At3g08000 [Arabidopsis thaliana]
gb|AAF21210.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 143
Score = 85.5 bits (210), Expect = 9e-16
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 1/119 (0%)
Frame = +2
Query: 38 GTMMLANKLGGLLKNATSSKSSNMSVYQAIRCMS-SSKLFVGGLSYGTDDHSLRDEFAKY 214
G +L ++ + +++ SS + + S SSKLF+GGLS+ D+ SL+D F+ +
Sbjct: 5 GIELLVRRVSAIPQHSISSSFHFLPQFCTSSSASPSSKLFIGGLSWSVDEQSLKDAFSSF 64
Query: 215 GQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANERTGG 391
G+V E +I D+ SGRSRGFGF+ + AMDGK L GR +R++ A ER G
Sbjct: 65 GEVAEVRIAYDKGSGRSRGFGFVDFAEEGDALSAKDAMDGKGLLGRPLRISFALERVRG 123
>pdb|1X5S|A Chain A, Solution Structure Of Rrm Domain In A18 Hnrnp
Length = 102
Score = 85.5 bits (210), Expect = 9e-16
Identities = 44/97 (45%), Positives = 61/97 (62%)
Frame = +2
Query: 89 SSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSR 268
SS SS M+ KLFVGGLS+ T++ SL F+KYGQ+ E ++ DRE+ RSR
Sbjct: 2 SSGSSGMA-------SDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQRSR 54
Query: 269 GFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANE 379
GFGF+T+ + AM+GK++DGR IRV+ A +
Sbjct: 55 GFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVDQAGK 91
>gb|AAH69219.1| Cold inducible RNA binding protein [Rattus norvegicus]
ref|NP_112409.2| cold inducible RNA binding protein [Rattus norvegicus]
Length = 172
Score = 85.1 bits (209), Expect = 1e-15
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ +L F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYR 94
>gb|AAQ57122.1| cold-inducible RNA binding protein [Cricetulus griseus]
dbj|BAE21245.1| unnamed protein product [Mus musculus]
dbj|BAB29491.1| unnamed protein product [Mus musculus]
gb|AAH75699.1| Cold inducible RNA binding protein [Mus musculus]
sp|P60825|CIRBP_RAT Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP)
sp|P60824|CIRBP_MOUSE Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP)
sp|P60826|CIRBP_CRIGR Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (A18 hnRNP)
ref|NP_031731.1| cold inducible RNA binding protein [Mus musculus]
dbj|BAA11213.1| CIRP [Mus musculus]
dbj|BAA19092.1| CIRP [Rattus norvegicus]
Length = 172
Score = 85.1 bits (209), Expect = 1e-15
Identities = 41/88 (46%), Positives = 60/88 (68%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGLS+ T++ +L F+KYGQ+ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 7 KLFVGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMA 66
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A + R+ G+R
Sbjct: 67 MNGKSVDGRQIRVDQAGKSSDNRSRGYR 94
>ref|XP_896365.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA-binding
motif protein 3) [Mus musculus]
ref|XP_915071.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA-binding
motif protein 3) [Mus musculus]
Length = 153
Score = 85.1 bits (209), Expect = 1e-15
Identities = 39/84 (46%), Positives = 57/84 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RS+GF FIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSQGFDFITFTNPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKFARGSR 90
>ref|XP_384017.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
gb|EAA71543.1| hypothetical protein FG03841.1 [Gibberella zeae PH-1]
Length = 1163
Score = 85.1 bits (209), Expect = 1e-15
Identities = 38/84 (45%), Positives = 58/84 (69%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S+K++VG L + T D SLR+ F YGQ++++ ++ DR++GRSRGFGF+T+ I
Sbjct: 2 SAKVYVGNLGWNTTDDSLRNAFQDYGQILDSIVMRDRDTGRSRGFGFVTFGSSQEAETAI 61
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
+++ + LDGR I+VN AN R GG
Sbjct: 62 ISLNEQELDGRRIKVNLANARPGG 85
>gb|AAW44674.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
ref|XP_571981.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gb|EAL19553.1| hypothetical protein CNBG1820 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 161
Score = 84.7 bits (208), Expect = 2e-15
Identities = 41/86 (47%), Positives = 56/86 (65%)
Frame = +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
MS+SK++VG LS+ + D +L F+ YG V + ++ DRE+GRSRGFGF+TY
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 314 XITAMDGKTLDGRNIRVNHANERTGG 391
I AM+ + LDGR +RVN AN R G
Sbjct: 61 AIAAMNEQELDGRRVRVNMANSRGSG 86
>gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 182
Score = 84.7 bits (208), Expect = 2e-15
Identities = 41/86 (47%), Positives = 56/86 (65%)
Frame = +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
MS+SK++VG LS+ + D +L F+ YG V + ++ DRE+GRSRGFGF+TY
Sbjct: 1 MSASKVYVGNLSWNSTDDTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEA 60
Query: 314 XITAMDGKTLDGRNIRVNHANERTGG 391
I AM+ + LDGR +RVN AN R G
Sbjct: 61 AIAAMNEQELDGRRVRVNMANSRGSG 86
>sp|O93235|CIRBP_XENLA Cold-inducible RNA-binding protein (Glycine-rich RNA-binding
protein CIRP) (xCIRP)
pir||JC6571 cold-inducible RNA-binding protein homolog - clawed frog
dbj|BAA31861.1| cold-inducible RNA binding protein [Xenopus laevis]
Length = 163
Score = 84.3 bits (207), Expect = 2e-15
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL++ T++ L F KYG++ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A ER GG+R
Sbjct: 66 MNGKSVDGRQIRVDQAGKSSGERRGGYR 93
>gb|AAH41204.1| Cirbp-prov protein [Xenopus laevis]
Length = 166
Score = 84.3 bits (207), Expect = 2e-15
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL++ T++ L F KYG++ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 6 KLFIGGLNFETNEDCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A ER GG+R
Sbjct: 66 MNGKSVDGRQIRVDQAGKSSGERRGGYR 93
>emb|CAA37880.1| unnamed protein product [Nicotiana sylvestris]
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplast precursor (28RNP)
pir||S12109 ribonucleoprotein, 28K, precursor - common tobacco
Length = 276
Score = 84.3 bits (207), Expect = 2e-15
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG + + DD L F+++G+V+ A+++ DRESGRSRGFGF+T + I
Sbjct: 192 RIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRSRGFGFVTMSSEAEMSEAIAN 251
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+TLDGR IRVN A ER
Sbjct: 252 LDGQTLDGRTIRVNAAEER 270
Score = 55.8 bits (133), Expect = 8e-07
Identities = 31/80 (38%), Positives = 42/80 (52%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L Y D L F + G V A++I +RE+ RSRGFGF+T + +
Sbjct: 97 AKLFVGNLPYDIDSEGLAQLFQQAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEADKAVE 156
Query: 323 AMDGKTLDGRNIRVNHANER 382
L+GR + VN A R
Sbjct: 157 LYSQYDLNGRLLTVNKAAPR 176
>ref|XP_391240.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
gb|EAA74887.1| hypothetical protein FG11064.1 [Gibberella zeae PH-1]
Length = 127
Score = 84.3 bits (207), Expect = 2e-15
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
SKL+VG LS+ T D +LR F+++G+V ++ I+ DR++GR+RGFGF+T++ +
Sbjct: 2 SKLYVGNLSWNTTDETLRQTFSEFGEVTDSIIMRDRDTGRARGFGFVTFSTEEQATAAVD 61
Query: 323 AMDGKTLDGRNIRVNHANERTGG 391
A++ + LDGR IRVN AN R G
Sbjct: 62 ALNEQELDGRRIRVNVANARPAG 84
>gb|AAG09816.1| cold-inducible RNA binding protein XCIRP-1 [Xenopus laevis]
Length = 166
Score = 84.0 bits (206), Expect = 3e-15
Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL++ T++ L F KYG++ E ++ DRE+ RSRGFGF+T+ + A
Sbjct: 6 KLFIGGLNFETNEGCLEQAFTKYGRISEVVVVKDRETKRSRGFGFVTFENVDDAKDAMMA 65
Query: 326 MDGKTLDGRNIRVNHA----NERTGGFR 397
M+GK++DGR IRV+ A ER GG+R
Sbjct: 66 MNGKSVDGRQIRVDQAGKSSGERRGGYR 93
>dbj|BAE56344.1| unnamed protein product [Aspergillus oryzae]
Length = 127
Score = 83.6 bits (205), Expect = 3e-15
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 4/89 (4%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
SKLF+GGL++ T D SLR F KYG V EA ++ DR++GRSRGFGF+ ++
Sbjct: 2 SKLFIGGLAWHTTDESLRSGFEKYGAVEEAIVVKDRDTGRSRGFGFVRFSSEADAEAAAH 61
Query: 323 AMDGKTLDGRNIRVNHANERT----GGFR 397
M+ + DGR IRV+ A+ER GGF+
Sbjct: 62 EMNNQEFDGRTIRVDKASERAPRNDGGFQ 90
>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 83.6 bits (205), Expect = 3e-15
Identities = 37/79 (46%), Positives = 56/79 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + DD L F+++G+V+EA+++ DRE+GRSRGFGF+T + I A
Sbjct: 216 RMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAA 275
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG++LDGR IRVN A +R
Sbjct: 276 LDGQSLDGRAIRVNVAEDR 294
Score = 55.8 bits (133), Expect = 8e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L Y D +L + F + G V A++I +RE+ +SRGFGF+T + +
Sbjct: 121 AKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVE 180
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ ++GR + VN A R
Sbjct: 181 MFNRYDINGRLLTVNKAAPR 200
>gb|AAO90692.1| nucleic acid binding domain protein [Coxiella burnetii RSA 493]
ref|NP_820178.1| nucleic acid binding domain protein [Coxiella burnetii RSA 493]
Length = 103
Score = 83.6 bits (205), Expect = 3e-15
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
MS +K++VG LSY L+ F +YG++ EAK+I+DRE+GRS+GF FITY
Sbjct: 1 MSQNKIYVGSLSYDVTADELQSFFGQYGEIEEAKLIMDRETGRSKGFAFITYGTQDAAQE 60
Query: 314 XITAMDGKTLDGRNIRVNHANERTGGFR 397
++ +G L GR IRVN A E TG R
Sbjct: 61 AVSKANGIDLQGRKIRVNIARENTGDRR 88
>ref|NP_190914.1| CP29; RNA binding [Arabidopsis thaliana]
gb|AAL76152.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gb|AAK64013.1| AT3g53460/F4P12_160 [Arabidopsis thaliana]
gb|AAM65393.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
emb|CAB67653.1| RNA-binding protein cp29 protein [Arabidopsis thaliana]
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplast precursor (RNA-binding
protein cp29)
pir||T45886 RNA-binding protein cp29 protein - Arabidopsis thaliana
Length = 342
Score = 83.2 bits (204), Expect = 4e-15
Identities = 38/82 (46%), Positives = 57/82 (69%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
S ++L+VG LS+G DD +L + F + G+V+EA++I DR+SGRS+GFGF+T +
Sbjct: 255 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 314
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I +++G LDGR IRV+ A R
Sbjct: 315 INSLNGADLDGRQIRVSEAEAR 336
Score = 58.5 bits (140), Expect = 1e-07
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVG LS+ D L F G V ++I D+ +GRSRGFGF+T +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 326 MDGKTLDGRNIRVN 367
+G +GR +RVN
Sbjct: 160 FNGYEFEGRPLRVN 173
>dbj|BAA06519.1| cp29 [Arabidopsis thaliana]
Length = 326
Score = 83.2 bits (204), Expect = 4e-15
Identities = 38/82 (46%), Positives = 57/82 (69%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
S ++L+VG LS+G DD +L + F + G+V+EA++I DR+SGRS+GFGF+T +
Sbjct: 239 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 298
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I +++G LDGR IRV+ A R
Sbjct: 299 INSLNGADLDGRQIRVSEAEAR 320
Score = 58.5 bits (140), Expect = 1e-07
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVG LS+ D L F G V ++I D+ +GRSRGFGF+T +
Sbjct: 92 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 151
Query: 326 MDGKTLDGRNIRVN 367
+G +GR +RVN
Sbjct: 152 FNGYEFEGRPLRVN 165
>ref|NP_850692.1| CP29; RNA binding [Arabidopsis thaliana]
dbj|BAA06518.1| cp29 [Arabidopsis thaliana]
Length = 334
Score = 83.2 bits (204), Expect = 4e-15
Identities = 38/82 (46%), Positives = 57/82 (69%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
S ++L+VG LS+G DD +L + F + G+V+EA++I DR+SGRS+GFGF+T +
Sbjct: 247 SGNRLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKA 306
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I +++G LDGR IRV+ A R
Sbjct: 307 INSLNGADLDGRQIRVSEAEAR 328
Score = 58.5 bits (140), Expect = 1e-07
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVG LS+ D L F G V ++I D+ +GRSRGFGF+T +
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 326 MDGKTLDGRNIRVN 367
+G +GR +RVN
Sbjct: 160 FNGYEFEGRPLRVN 173
>ref|XP_758559.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
gb|EAK83450.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
Length = 192
Score = 83.2 bits (204), Expect = 4e-15
Identities = 39/84 (46%), Positives = 55/84 (65%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
++K++VG LS+ T D SL F+ YGQ+ + ++ DRE+GRSRGFGF+T+ I
Sbjct: 2 AAKVYVGNLSWNTTDDSLAHAFSTYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAI 61
Query: 320 TAMDGKTLDGRNIRVNHANERTGG 391
A++ + LDGR IRVN AN R G
Sbjct: 62 AALNEQELDGRRIRVNMANSRPAG 85
>emb|CAA40364.1| 31kD chloroplast ribonucleoprotein [Nicotiana sylvestris]
emb|CAA37885.1| unnamed protein product [Nicotiana sylvestris]
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplast precursor
Length = 315
Score = 82.8 bits (203), Expect = 6e-15
Identities = 36/82 (43%), Positives = 56/82 (68%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S +++VG + +G DD L F+++G+V+ A+++ DRE+GRSRGFGF+T I
Sbjct: 229 SYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRGFGFVTMASEAEMSDAI 288
Query: 320 TAMDGKTLDGRNIRVNHANERT 385
+DG++LDGR IRVN A +R+
Sbjct: 289 ANLDGQSLDGRTIRVNVAEDRS 310
Score = 52.4 bits (124), Expect = 8e-06
Identities = 28/80 (35%), Positives = 43/80 (53%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L Y D L F + G V A++I +R++ +SRGFGF+T + +
Sbjct: 136 AKLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 195
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ ++GR + VN A R
Sbjct: 196 MYNRYDVNGRLLTVNKAARR 215
>emb|CAA43427.1| 29kD A ribonucleoprotein [Nicotiana sylvestris]
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A)
Length = 273
Score = 82.4 bits (202), Expect = 8e-15
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS++++VG L++G D +L F++ G+V++AK++ DR+SGRSRGFGF+TY+
Sbjct: 186 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 245
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I ++DG L+GR IRV+ A R
Sbjct: 246 IESLDGVDLNGRAIRVSPAEAR 267
Score = 59.7 bits (143), Expect = 5e-08
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
K+FVG L + D +L + F + G V ++I D+ +GRSRGFGF+T +
Sbjct: 88 KIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 326 MDGKTLDGRNIRVN 367
+G LDGR +RVN
Sbjct: 148 FNGYELDGRALRVN 161
>dbj|BAA12064.1| RNA-binding protein RZ-1 [Nicotiana sylvestris]
dbj|BAA06012.1| RNA binding protein, RZ-1 [Nicotiana sylvestris]
Length = 209
Score = 82.4 bits (202), Expect = 8e-15
Identities = 38/84 (45%), Positives = 54/84 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ F+G LS+ T D L+D F K+G +++AK++LD+ SGRSRGFGF+T+ I A
Sbjct: 7 RCFIGNLSWSTSDRGLKDAFEKFGNLVDAKVVLDKFSGRSRGFGFVTFDEKRAMEDAIEA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G LDGR+I V+ A G R
Sbjct: 67 MNGVDLDGRDITVDKAQPDKGSGR 90
>gb|AAA33486.1| nucleic acid-binding protein
Length = 303
Score = 82.4 bits (202), Expect = 8e-15
Identities = 37/81 (45%), Positives = 57/81 (70%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S +++VG L + DD L + F+++G+V++A+++ DRE+GRSRGFGF+T I
Sbjct: 218 SLRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRETGRSRGFGFVTMASQDELDDAI 277
Query: 320 TAMDGKTLDGRNIRVNHANER 382
A+DG++LDGR +RVN A ER
Sbjct: 278 AALDGQSLDGRALRVNVAEER 298
Score = 50.8 bits (120), Expect = 2e-05
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+K++VG L Y D L F + G V A++I +RE+ +SRGFGF+T + +
Sbjct: 125 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVE 184
Query: 323 AMDGKTLDGRNIRVNHANER 382
++GR + VN A R
Sbjct: 185 MFHRYDVNGRLLTVNKAAPR 204
>gb|AAA79045.1| 24 kDa RNA binding protein
Length = 220
Score = 82.4 bits (202), Expect = 8e-15
Identities = 39/82 (47%), Positives = 56/82 (68%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS+++ VG LS+ DD +L+ F++ G V+EAK+I DR++GRSRGFGF+TY
Sbjct: 133 SSNRVHVGNLSWKVDDDALKTLFSETGDVVEAKVIYDRDTGRSRGFGFVTYNSANEVNTA 192
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I ++DG L+GR+IRV A R
Sbjct: 193 IESLDGVDLNGRSIRVTAAEAR 214
Score = 53.5 bits (127), Expect = 4e-06
Identities = 27/79 (34%), Positives = 39/79 (49%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
K+FVG L + D L F G V ++I D+ +GRSRGFGF+T +
Sbjct: 39 KIFVGNLPFNVDSAELAGLFGAAGTVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAAQQ 98
Query: 326 MDGKTLDGRNIRVNHANER 382
+ LDGR +RV + +
Sbjct: 99 FNNYELDGRTLRVTEDSHK 117
>gb|AAK01176.1| RNA-binding protein [Triticum aestivum]
Length = 183
Score = 82.4 bits (202), Expect = 8e-15
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVG LS+ T D L+D F K+G+V E K++LD+ SGRSRGFGF+T+ + A
Sbjct: 8 RCFVGSLSWNTTDVDLKDAFGKFGRVTETKVVLDKFSGRSRGFGFVTFDDKKAMEEAVEA 67
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G LDGRNI V A + G
Sbjct: 68 MNGIDLDGRNITVERAQPQGSG 89
>emb|CAA46234.1| RNA binding protein 30 [Nicotiana plumbaginifolia]
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplast precursor (CP-RBP30)
Length = 279
Score = 82.4 bits (202), Expect = 8e-15
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS++++VG L++G D +L F++ G+V++AK++ DR+SGRSRGFGF+TY+
Sbjct: 192 SSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNA 251
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I ++DG L+GR IRV+ A R
Sbjct: 252 IESLDGVDLNGRAIRVSPAEAR 273
Score = 59.3 bits (142), Expect = 7e-08
Identities = 29/74 (39%), Positives = 42/74 (56%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
K+FVG L + D +L + F + G V ++I D+ +GRSRGFGF+T +
Sbjct: 88 KIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEVEAACQQ 147
Query: 326 MDGKTLDGRNIRVN 367
+G LDGR +RVN
Sbjct: 148 FNGYELDGRALRVN 161
>emb|CAA06469.1| cp31AHv protein [Hordeum vulgare subsp. vulgare]
Length = 294
Score = 82.4 bits (202), Expect = 8e-15
Identities = 37/82 (45%), Positives = 58/82 (70%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS +++VG L + DD L + F+++G+V++AK++ DR++GRSRGFGF+T
Sbjct: 208 SSFRIYVGNLPWQVDDSRLVELFSEHGKVVDAKVVYDRDTGRSRGFGFVTMASQEELDDA 267
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I A+DG++L+GR +RVN A ER
Sbjct: 268 IAALDGQSLEGRALRVNVAEER 289
Score = 50.1 bits (118), Expect = 4e-05
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+K++VG L Y D L F + G V +++I +RE+ +SRGFGF+T + +
Sbjct: 116 AKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVE 175
Query: 323 AMDGKTLDGRNIRVNHANER 382
++GR + VN A R
Sbjct: 176 MFHRYDVNGRLLTVNKAAPR 195
>pir||S15348 RNA-binding protein, 28K - spinach
Length = 233
Score = 82.0 bits (201), Expect = 1e-14
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S +++VG L + D L F+++G+V+ A+++ DRE+GRSRGFGF+T + I
Sbjct: 148 SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 207
Query: 320 TAMDGKTLDGRNIRVNHANER 382
A+DG+TLDGR +RVN A ER
Sbjct: 208 AALDGQTLDGRAVRVNVAEER 228
Score = 61.6 bits (148), Expect = 1e-08
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L Y D L F G V A++I +RE+ RSRGFGF+T + +
Sbjct: 55 AKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 114
Query: 323 AMDGKTLDGRNIRVNHANER 382
++G +DGR + VN A R
Sbjct: 115 LLNGYDMDGRQLTVNKAAPR 134
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplast (28RNP)
Length = 233
Score = 82.0 bits (201), Expect = 1e-14
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S +++VG L + D L F+++G+V+ A+++ DRE+GRSRGFGF+T + I
Sbjct: 148 SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 207
Query: 320 TAMDGKTLDGRNIRVNHANER 382
A+DG+TLDGR +RVN A ER
Sbjct: 208 AALDGQTLDGRAVRVNVAEER 228
Score = 61.6 bits (148), Expect = 1e-08
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L Y D L F G V A++I +RE+ RSRGFGF+T + +
Sbjct: 55 AKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 114
Query: 323 AMDGKTLDGRNIRVNHANER 382
++G +DGR + VN A R
Sbjct: 115 LLNGYDMDGRQLTVNKAAPR 134
>emb|CAA41023.1| 28kD RNA binding protein [Spinacia oleracea]
Length = 226
Score = 82.0 bits (201), Expect = 1e-14
Identities = 37/81 (45%), Positives = 55/81 (67%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S +++VG L + D L F+++G+V+ A+++ DRE+GRSRGFGF+T + I
Sbjct: 141 SCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGRSRGFGFVTMSSESEVNDAI 200
Query: 320 TAMDGKTLDGRNIRVNHANER 382
A+DG+TLDGR +RVN A ER
Sbjct: 201 AALDGQTLDGRAVRVNVAEER 221
Score = 61.6 bits (148), Expect = 1e-08
Identities = 32/80 (40%), Positives = 44/80 (55%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L Y D L F G V A++I +RE+ RSRGFGF+T + +
Sbjct: 48 AKLFVGNLPYDVDSEKLAGIFDAAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 107
Query: 323 AMDGKTLDGRNIRVNHANER 382
++G +DGR + VN A R
Sbjct: 108 LLNGYDMDGRQLTVNKAAPR 127
>ref|XP_485004.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA-binding
motif protein 3) [Mus musculus]
Length = 153
Score = 81.6 bits (200), Expect = 1e-14
Identities = 38/84 (45%), Positives = 56/84 (66%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ T + +L + F+ +G + E ++ DRE+ RS GFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>ref|NP_001017797.1| hypothetical protein LOC550495 [Danio rerio]
gb|AAH95030.1| Hypothetical protein LOC550495 [Danio rerio]
gb|AAH93299.1| Hypothetical protein LOC550495 [Danio rerio]
Length = 185
Score = 81.6 bits (200), Expect = 1e-14
Identities = 37/82 (45%), Positives = 53/82 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGLS+ T + SL D F+KYG + + +RE+ RSRGFGF+T+ +
Sbjct: 6 KLFIGGLSFDTTEQSLEDAFSKYGVITNVHVARNRETNRSRGFGFVTFENPDDAKDALEG 65
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+GK++DGR IRV+ A + GG
Sbjct: 66 MNGKSVDGRTIRVDEAGKGGGG 87
>dbj|BAD46651.1| putative nucleic acid-binding protein [Oryza sativa (japonica
cultivar-group)]
dbj|BAD46644.1| putative nucleic acid-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 322
Score = 81.6 bits (200), Expect = 1e-14
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S +++VG L + DD L F+++G+V++A+++ DRE+GRSRGFGF+T I
Sbjct: 236 SFRIYVGNLPWQVDDSRLVQLFSEHGKVVDARVVYDRETGRSRGFGFVTMATQEELDDAI 295
Query: 320 TAMDGKTLDGRNIRVNHANER 382
A+DG++LDGR +RVN A ER
Sbjct: 296 AALDGQSLDGRALRVNVAEER 316
Score = 52.8 bits (125), Expect = 6e-06
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+K++VG L Y D L F + G V +++I +RE+ RSRGFGF+T + +
Sbjct: 143 AKVYVGNLPYDIDSERLAQLFEQAGIVEVSEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 202
Query: 323 AMDGKTLDGRNIRVNHANER 382
+DGR + VN A R
Sbjct: 203 MFHRYDVDGRLLTVNKAAPR 222
>gb|AAH57481.1| Cirbp protein [Danio rerio]
Length = 121
Score = 81.6 bits (200), Expect = 1e-14
Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +2
Query: 158 GGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGK 337
GGLSY T + SL + F+KYG + + +I DRE+ RSRGFGF+T+ + AM+GK
Sbjct: 3 GGLSYDTTEQSLEEAFSKYGTIAKVDVIRDRETDRSRGFGFVTFENPEDAKDAMAAMNGK 62
Query: 338 TLDGRNIRVNHANE---RTGGFR 397
+DGR IRV+ A + R+GGFR
Sbjct: 63 QVDGRMIRVDEAGKSGGRSGGFR 85
>ref|XP_470714.1| putative ribonucleoprotein [Oryza sativa]
gb|AAL82527.1| putative ribonucleoprotein [Oryza sativa]
Length = 265
Score = 81.3 bits (199), Expect = 2e-14
Identities = 37/81 (45%), Positives = 56/81 (69%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
+++++VG LS+G D+ +L + F+ G+V+EAK+I DRESGRSRGFGF+TY +
Sbjct: 179 ANRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAV 238
Query: 320 TAMDGKTLDGRNIRVNHANER 382
+ +DG +DGR IRV A +
Sbjct: 239 SNLDGADMDGRQIRVTVAESK 259
Score = 58.9 bits (141), Expect = 9e-08
Identities = 28/74 (37%), Positives = 42/74 (56%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
++FVG L + D L F + G V ++I D+ +GRSRGFGF+T + +
Sbjct: 87 RVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEVEAAVEQ 146
Query: 326 MDGKTLDGRNIRVN 367
+G LDGR++RVN
Sbjct: 147 FNGYILDGRSLRVN 160
>ref|XP_549003.1| PREDICTED: similar to RNA binding motif protein 3 [Canis
familiaris]
Length = 131
Score = 81.3 bits (199), Expect = 2e-14
Identities = 40/90 (44%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Frame = +2
Query: 134 MSSSK--LFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXX 307
MSS + LF+GGL++ T++ +L D F+ +G + E ++ DRE+ RSRGF FIT+T
Sbjct: 1 MSSEEGMLFLGGLNFNTNEQALEDHFSSFGPISEVVVVKDRETQRSRGFCFITFTNPEHA 60
Query: 308 XXXITAMDGKTLDGRNIRVNHANERTGGFR 397
+ M+GK+LDGR IRV+HA + G R
Sbjct: 61 SDAMRPMNGKSLDGRQIRVDHAGKLARGTR 90
>dbj|BAA22411.1| Ps16 protein [Triticum aestivum]
Length = 293
Score = 80.9 bits (198), Expect = 2e-14
Identities = 36/82 (43%), Positives = 58/82 (70%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS +++VG L + DD L + F+++G+V++A+++ DR++GRSRGFGF+T
Sbjct: 207 SSFRIYVGNLPWQVDDSRLVELFSEHGKVVDARVVYDRDTGRSRGFGFVTMASQPELDDA 266
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I A+DG++L+GR +RVN A ER
Sbjct: 267 IAALDGQSLEGRALRVNVAEER 288
Score = 50.1 bits (118), Expect = 4e-05
Identities = 26/80 (32%), Positives = 42/80 (52%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+K++VG L Y D L F + G V +++I +RE+ +SRGFGF+T + +
Sbjct: 115 AKVYVGNLPYDVDSERLAQLFEQAGVVEVSEVIYNRETDQSRGFGFVTMSTIEEAEKAVE 174
Query: 323 AMDGKTLDGRNIRVNHANER 382
++GR + VN A R
Sbjct: 175 MFHRYDVNGRLLTVNKAAPR 194
>ref|XP_855044.1| PREDICTED: similar to RNA binding motif protein 3 [Canis
familiaris]
Length = 152
Score = 80.5 bits (197), Expect = 3e-14
Identities = 37/84 (44%), Positives = 56/84 (66%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ T++ +L D F+ +G + E ++ DRE+ RSRGFGFIT++ + A
Sbjct: 40 KLFVGGLNFITNEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFSNPEYASDTMRA 99
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR I V+H + G R
Sbjct: 100 MNGESLDGRQICVDHVGKSARGTR 123
>gb|AAN28804.1| At4g24770/F22K18_30 [Arabidopsis thaliana]
gb|AAK95304.1| AT4g24770/F22K18_30 [Arabidopsis thaliana]
Length = 329
Score = 80.1 bits (196), Expect = 4e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + D+ L F+++G+V+EA+++ DRE+GRSRGFGF+T + I+A
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ L+GR IRVN A ER
Sbjct: 305 LDGQNLEGRAIRVNVAEER 323
Score = 54.3 bits (129), Expect = 2e-06
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L+Y + +L F + G V A++I +RE+ +SRGFGF+T + +
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ L+GR + VN A R
Sbjct: 210 KFNRYDLNGRLLTVNKAAPR 229
>ref|NP_194208.1| RBP31 (31-KDA RNA BINDING PROTEIN); RNA binding [Arabidopsis
thaliana]
emb|CAA46347.1| RNA-binding protein [Arabidopsis thaliana]
emb|CAB79387.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
emb|CAA22986.1| RNA-binding protein RNP-T precursor [Arabidopsis thaliana]
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplast precursor (RNA-binding
protein RNP-T) (RNA-binding protein 1/2/3) (AtRBP33)
(RNA-binding protein cp31)
gb|AAA32860.1| 31 kDa RNA binding protein
prf||1921382A RNA-binding protein
gb|AAA18378.1| RNA-binding protein 1
Length = 329
Score = 80.1 bits (196), Expect = 4e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + D+ L F+++G+V+EA+++ DRE+GRSRGFGF+T + I+A
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ L+GR IRVN A ER
Sbjct: 305 LDGQNLEGRAIRVNVAEER 323
Score = 54.3 bits (129), Expect = 2e-06
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L+Y + +L F + G V A++I +RE+ +SRGFGF+T + +
Sbjct: 150 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 209
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ L+GR + VN A R
Sbjct: 210 KFNRYDLNGRLLTVNKAAPR 229
>dbj|BAA06521.1| cp31 [Arabidopsis thaliana]
Length = 304
Score = 80.1 bits (196), Expect = 4e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + D+ L F+++G+V+EA+++ DRE+GRSRGFGF+T + I+A
Sbjct: 220 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 279
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ L+GR IRVN A ER
Sbjct: 280 LDGQNLEGRAIRVNVAEER 298
Score = 54.3 bits (129), Expect = 2e-06
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L+Y + +L F + G V A++I +RE+ +SRGFGF+T + +
Sbjct: 125 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 184
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ L+GR + VN A R
Sbjct: 185 KFNRYDLNGRLLTVNKAAPR 204
>emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 80.1 bits (196), Expect = 4e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + D+ L F+++G+V+EA+++ DRE+GRSRGFGF+T + I+A
Sbjct: 226 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 285
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ L+GR IRVN A ER
Sbjct: 286 LDGQNLEGRAIRVNVAEER 304
Score = 54.3 bits (129), Expect = 2e-06
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L+Y + +L F + G V A++I +RE+ +SRGFGF+T + +
Sbjct: 131 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 190
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ L+GR + VN A R
Sbjct: 191 KFNRYDLNGRLLTVNKAAPR 210
>gb|AAA18379.1| RNA-binding protein 2
Length = 315
Score = 80.1 bits (196), Expect = 4e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + D+ L F+++G+V+EA+++ DRE+GRSRGFGF+T + I+A
Sbjct: 231 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 290
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ L+GR IRVN A ER
Sbjct: 291 LDGQNLEGRAIRVNVAEER 309
Score = 54.3 bits (129), Expect = 2e-06
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L+Y + +L F + G V A++I +RE+ +SRGFGF+T + +
Sbjct: 136 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 195
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ L+GR + VN A R
Sbjct: 196 KFNRYDLNGRLLTVNKAAPR 215
>dbj|BAD87838.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 203
Score = 80.1 bits (196), Expect = 4e-14
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
SKLF+GGLSY T++ +L+D F+++G +I+ K+I +G+S+G+GF+ + +
Sbjct: 124 SKLFIGGLSYDTNETALKDAFSQHGHIIQVKVICHPVTGKSKGYGFVKFASEDEAAAALH 183
Query: 323 AMDGKTLDGRNIRVNHAN 376
M G+ +DGRNIRV++AN
Sbjct: 184 KMGGEVIDGRNIRVHYAN 201
>dbj|BAA06520.1| cp31 [Arabidopsis thaliana]
Length = 314
Score = 80.1 bits (196), Expect = 4e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + D+ L F+++G+V+EA+++ DRE+GRSRGFGF+T + I+A
Sbjct: 230 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 289
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ L+GR IRVN A ER
Sbjct: 290 LDGQNLEGRAIRVNVAEER 308
Score = 54.3 bits (129), Expect = 2e-06
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L+Y + +L F + G V A++I +RE+ +SRGFGF+T + +
Sbjct: 135 AKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVE 194
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ L+GR + VN A R
Sbjct: 195 KFNRYDLNGRLLTVNKAAPR 214
>ref|NP_196239.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM13348.1| unknown protein [Arabidopsis thaliana]
gb|AAL32792.1| Unknown protein [Arabidopsis thaliana]
gb|AAM65119.1| unknown [Arabidopsis thaliana]
dbj|BAB09686.1| unnamed protein product [Arabidopsis thaliana]
Length = 146
Score = 80.1 bits (196), Expect = 4e-14
Identities = 40/108 (37%), Positives = 66/108 (61%)
Frame = +2
Query: 59 KLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKI 238
++GG + +S+ S + R +SKLF+GGLS+ T + L + F+K GQV+EA+I
Sbjct: 6 RIGGRHLKSVCLINSSASCFFTQRRGVASKLFIGGLSFCTTEQGLSEAFSKCGQVVEAQI 65
Query: 239 ILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
++DR S RS+GFGF+T+ + +G+ L+GR I V++A +
Sbjct: 66 VMDRVSDRSKGFGFVTFASADEAQKALMEFNGQQLNGRTIFVDYAKAK 113
>gb|AAA18380.1| RNA-binding protein 3
Length = 162
Score = 80.1 bits (196), Expect = 4e-14
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + D+ L F+++G+V+EA+++ DRE+GRSRGFGF+T + I+A
Sbjct: 78 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 137
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ L+GR IRVN A ER
Sbjct: 138 LDGQNLEGRAIRVNVAEER 156
Score = 40.4 bits (93), Expect = 0.033
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 203 FAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
F + G V A++I +RE+ +SRGFGF+T + + + L+GR + VN A R
Sbjct: 3 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPR 62
>ref|XP_754757.1| hypothetical protein Afu3g08580 [Aspergillus fumigatus Af293]
gb|EAL92719.1| glycine-rich RNA-binding protein [Aspergillus fumigatus Af293]
Length = 118
Score = 79.7 bits (195), Expect = 5e-14
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 4/88 (4%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
SKLF+GGL++ T D +LR F YG V EA ++ DR++ RSRGFGF+ ++ +
Sbjct: 2 SKLFIGGLAWHTTDDALRQGFEPYGVVEEAIVVKDRDTNRSRGFGFVRFSSDTEADAAMD 61
Query: 323 AMDGKTLDGRNIRVNHANER----TGGF 394
AM+ + DGR IRV+ A+ER GGF
Sbjct: 62 AMNNQEFDGRTIRVDKASERPARNNGGF 89
>ref|XP_476928.1| glycine-rich RNA-binding protein-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAD31070.1| glycine-rich RNA-binding protein-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAC79944.1| glycine-rich RNA-binding protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 308
Score = 79.3 bits (194), Expect = 6e-14
Identities = 36/79 (45%), Positives = 53/79 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
++FVGGLS+ T + +L F++YG+VIE +++L+R++GRSRGFGF+T++ I
Sbjct: 8 RIFVGGLSWDTTERTLERAFSEYGKVIETQVVLERDTGRSRGFGFVTFSEPRAVDAAIRG 67
Query: 326 MDGKTLDGRNIRVNHANER 382
M LDGR I VN A R
Sbjct: 68 MHNGELDGRTISVNKAQPR 86
>gb|AAL39067.1| single-stranded DNA binding protein precursor [Solanum tuberosum]
Length = 289
Score = 79.3 bits (194), Expect = 6e-14
Identities = 36/82 (43%), Positives = 55/82 (67%)
Frame = +2
Query: 137 SSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXX 316
SS++++VG L++ D L F++ G+V++AK++ DR+SGRSRGFGF+TY+
Sbjct: 202 SSNRVYVGNLAWSVDQQQLETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAKEVNDA 261
Query: 317 ITAMDGKTLDGRNIRVNHANER 382
I ++DG L GR IRV+ A R
Sbjct: 262 IESLDGVDLGGRAIRVSPAEAR 283
Score = 60.1 bits (144), Expect = 4e-08
Identities = 36/120 (30%), Positives = 56/120 (46%)
Frame = +2
Query: 8 LSSFPSVSQLGTMMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDH 187
LS F + ++ + GGL S + N + K+FVG L + D
Sbjct: 62 LSDFDQIEEVEAGDDDEEEGGLSDEGASYEERNAN--------PDLKIFVGNLPFSVDSA 113
Query: 188 SLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVN 367
+L + F + G V ++I D+ +GRSRGFGF+T + +G +DGR +RVN
Sbjct: 114 ALAELFERAGDVEMVEVIYDKLTGRSRGFGFVTMSSKEAVEAACQQFNGYEIDGRALRVN 173
>gb|AAA33039.1| RNA-binding protein
Length = 289
Score = 79.3 bits (194), Expect = 6e-14
Identities = 37/81 (45%), Positives = 54/81 (66%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S +++VG L + DD L F+++G+V+ A+++ DRE+GRSRGF F+T I
Sbjct: 204 SFRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAI 263
Query: 320 TAMDGKTLDGRNIRVNHANER 382
A+DG+TL+GR IRVN A ER
Sbjct: 264 GALDGQTLEGRAIRVNVAEER 284
Score = 51.6 bits (122), Expect = 1e-05
Identities = 29/80 (36%), Positives = 41/80 (51%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L + D L F G V A++I +RE+ RSRGFGF+T + +
Sbjct: 111 AKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVEEAEKAVE 170
Query: 323 AMDGKTLDGRNIRVNHANER 382
++GR + VN A R
Sbjct: 171 LYHKFEVNGRFLTVNKAAPR 190
>ref|XP_915256.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA-binding
motif protein 3) [Mus musculus]
Length = 153
Score = 79.0 bits (193), Expect = 8e-14
Identities = 37/84 (44%), Positives = 55/84 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KL VGGL++ T + +L + F+ +G + E ++ DRE+ RS GFGFIT+T + A
Sbjct: 7 KLVVGGLNFNTHEQALENYFSSFGPISEVVVVKDRETQRSWGFGFITFTNPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGGFR 397
M+G++LDGR IRV+HA + G R
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSR 90
>ref|XP_470338.1| putative RNA binding protein [Oryza sativa (japonica
cultivar-group)]
gb|AAR88588.1| putative RNA binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 205
Score = 79.0 bits (193), Expect = 8e-14
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ F+G LS+ T D SL+D F K+G + EAK++ D+ SGRSRGFGF+T+ I
Sbjct: 8 RCFIGNLSWSTTDESLKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEG 67
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G LDGR I V+ A + G
Sbjct: 68 MNGLDLDGRAITVDKAQPQGPG 89
>emb|CAA11893.1| cp31BHv [Hordeum vulgare subsp. vulgare]
Length = 283
Score = 79.0 bits (193), Expect = 8e-14
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +2
Query: 62 LGGLLKNATSSKSSNMSVYQAIRCMSSS-KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKI 238
+ G L N + V + R +SS + +VG L + +D L F+++G+V+ A I
Sbjct: 171 ISGRLLNVNRAAQRGSRVERPPRQFASSFRAYVGNLPWQAEDSRLVQMFSEHGEVVNATI 230
Query: 239 ILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
+ DRE+GRSRGFGF+T I+A+DG+ +DGR +RVN A ER
Sbjct: 231 VYDRETGRSRGFGFVTMASKEDLDSAISALDGQEMDGRPLRVNVAAER 278
Score = 57.4 bits (137), Expect = 3e-07
Identities = 29/80 (36%), Positives = 44/80 (55%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+K++VG L Y D L F + G V A++I ++ESG+SRGFGF+T + I
Sbjct: 105 AKVYVGNLPYDVDSERLAQLFDQAGVVEVAEVIYNKESGQSRGFGFVTMSTIEEADKAIE 164
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ + GR + VN A +R
Sbjct: 165 TFNRYNISGRLLNVNRAAQR 184
>emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
sp|Q99069|GRP1_SORBI Glycine-rich RNA-binding protein 1
Length = 142
Score = 78.2 bits (191), Expect = 1e-13
Identities = 37/68 (54%), Positives = 47/68 (69%)
Frame = +2
Query: 185 HSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRV 364
+SL F+ YG+V+E+KIILDRE+ RSRGFGF+T++ I M+GK LDGRNI V
Sbjct: 1 NSLHSAFSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITV 60
Query: 365 NHANERTG 388
N A R G
Sbjct: 61 NEAQSRGG 68
>ref|XP_660593.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
gb|EAA63560.1| hypothetical protein AN2989.2 [Aspergillus nidulans FGSC A4]
Length = 118
Score = 78.2 bits (191), Expect = 1e-13
Identities = 38/89 (42%), Positives = 58/89 (65%), Gaps = 4/89 (4%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLF+GGL++ T D LR+ F++YG + EA ++ DR++ RSRGFGF+ + +
Sbjct: 2 AKLFIGGLAWHTTDDVLREGFSRYGTIEEAVVVKDRDTNRSRGFGFVRFASEPEADAAMG 61
Query: 323 AMDGKTLDGRNIRVNHANE----RTGGFR 397
AM+ + DGR IRV+ A+E R GGF+
Sbjct: 62 AMNNQEFDGRIIRVDKASERPAARNGGFQ 90
>gb|EAQ86776.1| hypothetical protein CHGG_08029 [Chaetomium globosum CBS 148.51]
Length = 105
Score = 78.2 bits (191), Expect = 1e-13
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
MS SK++VG LS+ TDD SLR F YG V+++ ++ DR++ RSRGFGF+T++
Sbjct: 1 MSGSKVYVGNLSWSTDDMSLRTAFEAYGLVVDSIVMKDRDTNRSRGFGFVTFSTTEEAEA 60
Query: 314 XITAMDGKTLDGRNIRVNHANERTGG 391
I +D + NIRVN AN R G
Sbjct: 61 AIAGLDQQ----ENIRVNMANARPSG 82
>emb|CAA74889.1| ribonucleoprotein [Pisum sativum]
gb|AAG13900.1| 33 kDa ribonucleoprotein [Pisum sativum]
Length = 291
Score = 77.8 bits (190), Expect = 2e-13
Identities = 34/79 (43%), Positives = 55/79 (69%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG LS+ DD L F+++G+V+ A+++ DRE+GRSRGFGF+T + I A
Sbjct: 207 RVYVGNLSWELDDSRLEQVFSEHGKVVSARVVYDRETGRSRGFGFVTMSDEKEMNDAIAA 266
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ L+GR I+V+ A +R
Sbjct: 267 LDGQILEGRTIKVSVAEDR 285
Score = 51.2 bits (121), Expect = 2e-05
Identities = 29/80 (36%), Positives = 40/80 (50%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L Y D L F G V A++I +RE+ +SRGFGF+T +
Sbjct: 109 AKLFVGNLPYDVDSEKLAMLFEPAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAEAGAA 168
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ +GR + VN A R
Sbjct: 169 KFNRYDYNGRPLTVNKAAPR 188
>gb|AAU92915.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
ref|YP_113486.1| RNA-binding protein [Methylococcus capsulatus str. Bath]
Length = 95
Score = 77.8 bits (190), Expect = 2e-13
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 2/85 (2%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
SKL+VG L+Y D L FA YG V A++++DR +GRSRGFGF+ I
Sbjct: 3 SKLYVGNLNYRVGDADLERTFAAYGTVKSAQVVMDRATGRSRGFGFVEMGSDQEAQAAIA 62
Query: 323 AMDGKTLDGRNIRVNHAN--ERTGG 391
++GK +DGRN+ VN A ER GG
Sbjct: 63 GLNGKEMDGRNLMVNEARPPERRGG 87
>ref|XP_483744.1| nucleic acid-binding protein-like [Oryza sativa (japonica
cultivar-group)]
dbj|BAD09079.1| nucleic acid-binding protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 131
Score = 77.4 bits (189), Expect = 2e-13
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ +VG L + DD L F+++G+V+ A ++ DRESGRSRGFGF++ I+A
Sbjct: 48 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 107
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ LDGR +RVN A ER
Sbjct: 108 LDGQELDGRPLRVNVAAER 126
>ref|XP_483743.1| putative nucleic acid-binding protein [Oryza sativa (japonica
cultivar-group)]
ref|XP_507331.1| PREDICTED OJ1150_A11.19-2 gene product [Oryza sativa (japonica
cultivar-group)]
dbj|BAD09078.1| putative nucleic acid-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 305
Score = 77.4 bits (189), Expect = 2e-13
Identities = 36/79 (45%), Positives = 52/79 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ +VG L + DD L F+++G+V+ A ++ DRESGRSRGFGF++ I+A
Sbjct: 222 RAYVGNLPWQVDDSRLLQLFSEHGEVVNASVVYDRESGRSRGFGFVSMASKEELDDAISA 281
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG+ LDGR +RVN A ER
Sbjct: 282 LDGQELDGRPLRVNVAAER 300
Score = 57.4 bits (137), Expect = 3e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+K++VG L Y D L F + G V A++I +RE+G+SRGFGF+T + I
Sbjct: 127 AKVYVGNLPYDVDSEGLAQLFEQAGVVEVAEVIYNRETGQSRGFGFVTMSTIEEADKAIE 186
Query: 323 AMDGKTLDGRNIRVNHANER 382
++ ++GR + VN A R
Sbjct: 187 MLNRYDINGRLLNVNRAAPR 206
>gb|AAX07503.1| unknown [Gemmata sp. Wa1-1]
Length = 122
Score = 77.4 bits (189), Expect = 2e-13
Identities = 34/79 (43%), Positives = 50/79 (63%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KL+VG LS+G D L+D F YG V+ A++I+DR++GRS+GFGF+ IT
Sbjct: 41 KLYVGNLSWGVTDSQLQDMFTPYGSVVSAQVIMDRDTGRSKGFGFVEMGTDQEAQAAITG 100
Query: 326 MDGKTLDGRNIRVNHANER 382
M G+ ++GR + VN A +
Sbjct: 101 MHGQVIEGRPLTVNEARPK 119
>ref|ZP_00243386.1| COG0724: RNA-binding proteins (RRM domain) [Rubrivivax gelatinosus
PM1]
Length = 162
Score = 77.4 bits (189), Expect = 2e-13
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KL+VG L+Y D L+ F ++G V AK+++DR++GRS+GFGF+ I
Sbjct: 3 NKLYVGNLAYSVRDDDLQQAFGEFGAVTSAKVMMDRDTGRSKGFGFVEMGSDAEAQAAIE 62
Query: 323 AMDGKTLDGRNIRVNHA---NERTGGFR 397
M+G++L GR I VN A ER GGFR
Sbjct: 63 GMNGQSLSGRAIVVNEARPREERPGGFR 90
>ref|XP_965121.1| hypothetical protein [Neurospora crassa N150]
ref|XP_331935.1| predicted protein [Neurospora crassa]
gb|EAA35885.1| predicted protein [Neurospora crassa]
Length = 193
Score = 77.0 bits (188), Expect = 3e-13
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 5/90 (5%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVGGLS+ TDD+ LR +F ++G V EA ++ DR++GRSRGFGF+ Y I
Sbjct: 2 AKLFVGGLSWNTDDNMLRAKFEEFGAVEEAVVVKDRDTGRSRGFGFVRYGNDADAENAIA 61
Query: 323 AMDGKTLDGRNIRVNHANERT-----GGFR 397
M DG+ +RV+ A++R GGFR
Sbjct: 62 NM-----DGQEVRVDKASDRAAGGGGGGFR 86
>emb|CAD18922.1| RNA-binding protein precursor [Persea americana]
Length = 315
Score = 77.0 bits (188), Expect = 3e-13
Identities = 36/79 (45%), Positives = 53/79 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG + + D+ L F++YG+V EA+I+ DRE+GRSRGFGF+T + I A
Sbjct: 231 RVYVGNIPWQVDNLRLEQLFSEYGKVEEARIVFDRETGRSRGFGFVTMSSQIEMEDAIAA 290
Query: 326 MDGKTLDGRNIRVNHANER 382
+DG LDGR I+V+ A ER
Sbjct: 291 LDGSDLDGRAIKVSMAQER 309
Score = 55.5 bits (132), Expect = 1e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
K+FVG L + + L D F K G V A++I +RE+ +SRGFGF++ + I
Sbjct: 137 KIFVGNLPFDLESADLADLFNKAGVVESAEVIYNRETDQSRGFGFVSMSTVEEVVKAIEM 196
Query: 326 MDGKTLDGRNIRVNHANER 382
D ++GR + VN A R
Sbjct: 197 FDRYDINGRTLTVNKAAPR 215
>ref|NP_181287.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM15089.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAM61313.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 142
Score = 76.6 bits (187), Expect = 4e-13
Identities = 42/113 (37%), Positives = 63/113 (55%)
Frame = +2
Query: 44 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 223
M + L+ ++S SS + ++S +LFV GLS T + L+D FA +GQ+
Sbjct: 1 MAFVSSFRRLVAGSSSLLSSPSLCVRRCSTLTSPRLFVSGLSRLTTNEKLQDAFASFGQL 60
Query: 224 IEAKIILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
++A++I DR+SGRS+GFGF+TY M+ K LDG I V+ A R
Sbjct: 61 VDARVITDRDSGRSKGFGFVTYATIEDAEKAKAEMNAKFLDGWVIFVDPARPR 113
>gb|AAF82129.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 386
Score = 76.3 bits (186), Expect = 5e-13
Identities = 33/78 (42%), Positives = 52/78 (66%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ TD+ +L EF KYG+++E ++ DRE+ +SRGF F+T+ +
Sbjct: 3 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAVRD 62
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 63 MNGKSLDGKAIKVAQATK 80
>ref|NP_910645.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
(japonica cultivar-group)]
dbj|BAC57733.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
(japonica cultivar-group)]
Length = 133
Score = 75.9 bits (185), Expect = 7e-13
Identities = 39/80 (48%), Positives = 49/80 (61%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+ LFV GL+ T LR+ F+K+GQVIEA++I DR SG SRGFGF+ Y I
Sbjct: 35 NNLFVSGLNKRTTSDGLREAFSKFGQVIEARVITDRISGYSRGFGFVKYATVEEAGEGIK 94
Query: 323 AMDGKTLDGRNIRVNHANER 382
MDGK LDG I +A +R
Sbjct: 95 GMDGKFLDGWVIFAEYAKQR 114
>gb|EAQ90849.1| hypothetical protein CHGG_02784 [Chaetomium globosum CBS 148.51]
Length = 179
Score = 75.9 bits (185), Expect = 7e-13
Identities = 38/82 (46%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
SKLF+GGL++ T++ +LR +F ++G V EA ++ DR++GRSRGFGF+ YT I
Sbjct: 2 SKLFIGGLAWHTEEPTLRQKFEEFGVVEEAVVVKDRDTGRSRGFGFVRYTNEGDAIKAIE 61
Query: 323 AM---DGKTLDGRNIRVNHANE 379
AM D + DGR IRV+ A++
Sbjct: 62 AMNNVDLPSFDGRQIRVDKASD 83
>emb|CAH25380.1| putative glycine-rich RNA-binding protein [Guillardia theta]
Length = 152
Score = 75.9 bits (185), Expect = 7e-13
Identities = 35/83 (42%), Positives = 49/83 (59%)
Frame = +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
+ +K FV GL + LRD FA++G + +A ++ DRE+GRSRGFGF+T+
Sbjct: 58 LDPNKCFVSGLPWALTSEDLRDLFAEFGAIQDANVVYDRETGRSRGFGFVTFAESADCEA 117
Query: 314 XITAMDGKTLDGRNIRVNHANER 382
ITAMD + GR + V AN R
Sbjct: 118 AITAMDKANIGGRTVLVKQANVR 140
>ref|NP_199836.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAL76138.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
gb|AAK63972.1| AT5g50250/K6A12_11 [Arabidopsis thaliana]
dbj|BAB09396.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 289
Score = 75.9 bits (185), Expect = 7e-13
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+++VG L + D L F+++G+V++A+++ DRE+GRSRGFGF+ + I A
Sbjct: 208 RIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAA 267
Query: 326 MDGKTLDGRNIRVNHANERT 385
+DG+ L+GR I+VN A ERT
Sbjct: 268 LDGQNLEGRAIKVNVAEERT 287
Score = 53.5 bits (127), Expect = 4e-06
Identities = 27/80 (33%), Positives = 44/80 (55%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KLFVG L Y D +L F + G V +++I +R++ +SRGFGF+T + +
Sbjct: 113 AKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVE 172
Query: 323 AMDGKTLDGRNIRVNHANER 382
+ ++GR + VN A R
Sbjct: 173 KFNSFEVNGRRLTVNRAAPR 192
>ref|NP_179221.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAD22311.1| putative glycine-rich RNA-binding protein [Arabidopsis thaliana]
Length = 185
Score = 75.5 bits (184), Expect = 9e-13
Identities = 35/82 (42%), Positives = 52/82 (63%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
+ FVGGL++ TD+ S+ F ++G+V ++KII+DRE+GRS+GF F+T+ I
Sbjct: 45 RCFVGGLAWATDEQSIERCFNEFGEVFDSKIIIDRETGRSKGFRFVTFKDEDSMRTAIDR 104
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ LDGRNI T G
Sbjct: 105 MNGQELDGRNITAQARGSGTRG 126
>ref|NP_055284.2| testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
gb|AAC24858.2| testes specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 392
Score = 74.7 bits (182), Expect = 2e-12
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ TD+ +L EF KYG+++E ++ DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVAQATK 86
>ref|XP_521823.1| PREDICTED: similar to testes-specific heterogenous nuclear
ribonucleoprotein G-T [Pan troglodytes]
Length = 392
Score = 74.7 bits (182), Expect = 2e-12
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ TD+ +L EF KYG+++E ++ DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVAQATK 86
>ref|XP_469309.1| putative RNA-binding protein [Oryza sativa (japonica
cultivar-group)]
gb|AAP68379.1| putative RNA-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 308
Score = 74.7 bits (182), Expect = 2e-12
Identities = 34/79 (43%), Positives = 52/79 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
++FVGGLS+ TD+ L D F ++G+V++A+I+L+R + R RGFGF+T++ I
Sbjct: 8 RIFVGGLSFHTDERKLADAFRRFGKVVDAQIMLERHTQRHRGFGFVTFSDPEAVDSAIKE 67
Query: 326 MDGKTLDGRNIRVNHANER 382
M + LDGR I VN A +
Sbjct: 68 MHCQELDGRTISVNKAEPK 86
>gb|AAB61213.1| glycine-rich protein [Oryza sativa]
Length = 197
Score = 74.7 bits (182), Expect = 2e-12
Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 36/115 (31%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAK------------------------------ 235
+ FVGGL++ TDD SL F+ YG+++E+K
Sbjct: 9 RCFVGGLAWATDDRSLEAAFSTYGEILESKVRWIPSSLCFFLMRFGGGVRQIWLRKSDYG 68
Query: 236 ------IILDRESGRSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
II DRE+GRSRGFGF+T++ I M+GK LDGRNI VN A R
Sbjct: 69 GGYAVQIINDRETGRSRGFGFVTFSNEQAMRDAIQGMNGKELDGRNITVNEAQSR 123
>dbj|BAE00759.1| unnamed protein product [Macaca fascicularis]
Length = 394
Score = 74.7 bits (182), Expect = 2e-12
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ TD+ +L EF KYG+++E ++ DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPANAKAAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVAQATK 86
>gb|EAQ20895.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas
naphthalenivorans CJ2]
ref|ZP_01020469.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas
naphthalenivorans CJ2]
Length = 132
Score = 73.9 bits (180), Expect = 3e-12
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KL+VG L Y D L+ F ++G V AK++++R++GRS+GFGF+ I
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIA 62
Query: 323 AMDGKTLDGRNIRVNHAN------ERTGGF 394
M+G++L GR+I VN A RTGGF
Sbjct: 63 GMNGQSLGGRSITVNEARPMEARPPRTGGF 92
>ref|NP_001029535.1| hypothetical protein LOC509771 [Bos taurus]
gb|AAI03474.1| Hypothetical protein LOC509771 [Bos taurus]
Length = 90
Score = 73.9 bits (180), Expect = 3e-12
Identities = 35/82 (42%), Positives = 52/82 (63%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDERALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASNAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ ++G + A E T G
Sbjct: 67 MNGEGVEGSGRQSRAAWEATTG 88
>emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio bacteriovorus HD100]
ref|NP_968295.1| putative RNA-binding protein [Bdellovibrio bacteriovorus HD100]
Length = 116
Score = 73.9 bits (180), Expect = 3e-12
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
K++VG LSY DD SL D FA++G V A+I++DRE+GRS+GF F+ + I
Sbjct: 4 KIYVGNLSYSLDDQSLADTFAEFGNVESARIVIDRETGRSKGFAFVEMSTDDEAATAIAK 63
Query: 326 MDGKTLDGRNIRVNHA-----NERTGGF 394
++G L GR + V+ A E GGF
Sbjct: 64 LNGVELMGRAMNVSEAKPMAPRENRGGF 91
>gb|AAI14041.1| Unknown (protein for MGC:137496) [Bos taurus]
Length = 396
Score = 73.6 bits (179), Expect = 3e-12
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ TD+ SL F KYG++ E ++ DRE+ +SRGF FIT+ +
Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVAQATK 86
>ref|ZP_01019076.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas
naphthalenivorans CJ2]
gb|EAQ22667.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas
naphthalenivorans CJ2]
Length = 150
Score = 73.6 bits (179), Expect = 3e-12
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KL+VG L Y D L+ F ++G V AK++++R++GRS+GFGF+ I
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAIN 62
Query: 323 AMDGKTLDGRNIRVNHAN------ERTGGF 394
M+G+ L GR+I VN A RTGGF
Sbjct: 63 GMNGQPLGGRSITVNEARPMEARPPRTGGF 92
>gb|EAQ20775.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas
naphthalenivorans CJ2]
ref|ZP_01020799.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas
naphthalenivorans CJ2]
Length = 152
Score = 73.6 bits (179), Expect = 3e-12
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KL+VG L Y D L+ F ++G V AK++++R++GRS+GFGF+ I
Sbjct: 3 NKLYVGNLPYSVRDEDLQQSFGQFGAVTSAKVMMERDTGRSKGFGFVEMASDAEAQAAIN 62
Query: 323 AMDGKTLDGRNIRVNHAN------ERTGGF 394
M+G+ L GR++ VN A RTGGF
Sbjct: 63 GMNGQPLGGRSVVVNEARPMEARPPRTGGF 92
>ref|XP_875397.1| PREDICTED: similar to testes-specific heterogenous nuclear
ribonucleoprotein G-T [Bos taurus]
Length = 312
Score = 73.6 bits (179), Expect = 3e-12
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ TD+ SL F KYG++ E ++ DRE+ +SRGF FIT+ +
Sbjct: 9 KLFIGGLNLETDEKSLEATFGKYGRISEVLLMKDRETNKSRGFAFITFESPADAKAAVRD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVAQATK 86
>ref|ZP_01021329.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas
naphthalenivorans CJ2]
gb|EAQ20184.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas
naphthalenivorans CJ2]
Length = 148
Score = 73.6 bits (179), Expect = 3e-12
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KL+VG L Y D L+ F ++G V AK++++R++GRS+GFGF+ I
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGQFGTVTSAKVMMERDTGRSKGFGFVEMANDAQAQAAIN 62
Query: 323 AMDGKTLDGRNIRVNHAN------ERTGGF 394
M+G+ L GR+I VN A RTGGF
Sbjct: 63 GMNGQPLGGRSITVNEARPMEARPPRTGGF 92
>gb|AAV59339.1| unknown protein [Oryza sativa (japonica cultivar-group)]
ref|XP_476202.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 104
Score = 73.6 bits (179), Expect = 3e-12
Identities = 34/81 (41%), Positives = 52/81 (64%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
S+++VG L Y D+ SL+D F+ YG V ++I +DRE+GRSRGFGF+++ I
Sbjct: 23 SRVYVGNLPYRADERSLKDSFSNYGAV-SSEIAVDRETGRSRGFGFVSFQDSKSASDAIK 81
Query: 323 AMDGKTLDGRNIRVNHANERT 385
M+G+ + GRN+ V A R+
Sbjct: 82 GMNGQDIGGRNVIVQEAQPRS 102
>emb|CAC86462.1| glycin-rich RNA binding protein [Polytomella sp. Pringsheim 198.80]
Length = 177
Score = 73.2 bits (178), Expect = 5e-12
Identities = 39/79 (49%), Positives = 49/79 (62%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
SS+L+VG LS+ + LR F K+G+V EA I LDRESGRSRGFGF+T I
Sbjct: 2 SSRLYVGNLSWNAKEEDLRTYFGKFGEVEEASIALDRESGRSRGFGFVTLP-ADVAKDAI 60
Query: 320 TAMDGKTLDGRNIRVNHAN 376
+G GRNI+VN A+
Sbjct: 61 EKTNGAEFMGRNIKVNEAS 79
>gb|AAH57796.1| Testes-specific heterogenous nuclear ribonucleoprotein G-T [Homo
sapiens]
Length = 392
Score = 73.2 bits (178), Expect = 5e-12
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GG + TD+ +L EF KYG+++E ++ DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGFNLETDEKALEAEFGKYGRIVEVLLMKDRETNKSRGFAFVTFESPADAKAAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVAQATK 86
>ref|ZP_01090592.1| RNA-binding protein [Blastopirellula marina DSM 3645]
gb|EAQ80901.1| RNA-binding protein [Blastopirellula marina DSM 3645]
Length = 149
Score = 73.2 bits (178), Expect = 5e-12
Identities = 36/79 (45%), Positives = 46/79 (58%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KL+VG L YG L + F +YGQV A +I DRE+GRSRGFGF+ A
Sbjct: 4 KLYVGNLPYGYGSSELENLFGQYGQVASASVINDRETGRSRGFGFVEMASDGDALAATEA 63
Query: 326 MDGKTLDGRNIRVNHANER 382
++G +DGR + VN A ER
Sbjct: 64 LNGFDVDGRKLVVNEARER 82
>ref|ZP_00509395.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
gb|EAM36513.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 134
Score = 73.2 bits (178), Expect = 5e-12
Identities = 35/90 (38%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KL+VG L Y D L+ F +G + AK++++R++GRS+GFGF+ I
Sbjct: 3 NKLYVGNLPYTVRDEDLQQSFGAFGSITSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIA 62
Query: 323 AMDGKTLDGRNIRVNHAN------ERTGGF 394
M+G++L GR+I VN A RTGGF
Sbjct: 63 GMNGQSLGGRSITVNEARPMEARPPRTGGF 92
>ref|XP_863236.1| PREDICTED: similar to RNA binding motif protein 3 isoform b isoform
5 [Canis familiaris]
ref|XP_863218.1| PREDICTED: similar to RNA binding motif protein 3 isoform b isoform
4 [Canis familiaris]
ref|XP_851113.1| PREDICTED: similar to RNA binding motif protein 3 isoform b isoform
1 [Canis familiaris]
Length = 90
Score = 73.2 bits (178), Expect = 5e-12
Identities = 35/82 (42%), Positives = 51/82 (62%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFRSFGPISEVVVVKDRETQRSRGFGFITFTDPEHASDAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ ++G + A E T G
Sbjct: 67 MNGEGVEGSGRQSRAAWEATTG 88
>gb|AAX07506.1| unknown [Gemmata sp. Wa1-1]
Length = 163
Score = 72.8 bits (177), Expect = 6e-12
Identities = 38/101 (37%), Positives = 53/101 (52%), Gaps = 1/101 (0%)
Frame = +2
Query: 83 ATSSKSSNMSVYQAIRCMS-SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESG 259
A S S+ RC + KL+VG L YG D LR F YG V A++I+DR++G
Sbjct: 43 ALGSVPSDSGPLGPARCETVGKKLYVGNLGYGVTDEQLRGMFGPYGSVQTAQVIMDRDTG 102
Query: 260 RSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHANER 382
RS+GFGF+ I M+G+ +GR + VN A +
Sbjct: 103 RSKGFGFVEMNSDQEAQAAIAGMNGQMSEGRALTVNEAKPK 143
>ref|NP_849832.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
ref|NP_564759.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
dbj|BAD94150.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAB71977.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAM65738.1| RNA binding protein, putative [Arabidopsis thaliana]
gb|AAN86161.1| putative glycine-rich RNA binding protein [Arabidopsis thaliana]
Length = 292
Score = 72.8 bits (177), Expect = 6e-12
Identities = 34/83 (40%), Positives = 50/83 (60%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
S++FVGGLS+ + L F +YG++ E +I++ R++GR RGFGFIT+T I
Sbjct: 12 SRIFVGGLSWDVTERQLESTFDRYGKITECQIMVGRDTGRPRGFGFITFTDRRGADDAIK 71
Query: 323 AMDGKTLDGRNIRVNHANERTGG 391
M G+ L + I VN A + GG
Sbjct: 72 HMHGRELGNKVISVNKAEPKVGG 94
>ref|NP_200269.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM20239.1| unknown protein [Arabidopsis thaliana]
gb|AAL59923.1| unknown protein [Arabidopsis thaliana]
gb|AAM62467.1| unknown [Arabidopsis thaliana]
dbj|BAB09337.1| unnamed protein product [Arabidopsis thaliana]
Length = 156
Score = 72.8 bits (177), Expect = 6e-12
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S+ LFV GLS T LR FA++G+V +AK++ DR SG S+GFGF+ Y I
Sbjct: 55 STNLFVSGLSKRTTSEGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLEDSAKGI 114
Query: 320 TAMDGKTLDGRNIRVNHANER 382
MDGK LDG I +A R
Sbjct: 115 AGMDGKFLDGWVIFAEYARPR 135
>ref|NP_001017430.1| RNA binding motif protein 3 isoform b [Homo sapiens]
emb|CAH89634.1| hypothetical protein [Pongo pygmaeus]
Length = 90
Score = 72.8 bits (177), Expect = 6e-12
Identities = 35/82 (42%), Positives = 52/82 (63%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 326 MDGKTLDGRNIRVNHANERTGG 391
M+G+ ++G + A E T G
Sbjct: 67 MNGEGVEGSGRQSLAAWEATTG 88
>gb|AAD00328.1| RBM1 [Sminthopsis macroura]
Length = 390
Score = 72.4 bits (176), Expect = 8e-12
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ L F KYG+++E ++ DRE+ +SRGF FIT+
Sbjct: 9 KLFIGGLNTETNEKGLESVFGKYGRIVEVLLMKDRETNKSRGFAFITFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANE---RTGGFR 397
M+GK+LDG++I+V A + +GG R
Sbjct: 69 MNGKSLDGKSIKVEQATKPSFESGGRR 95
>ref|NP_083936.1| testes-specific heterogenous nuclear ribonucleoprotein G-T [Mus
musculus]
dbj|BAB24311.1| unnamed protein product [Mus musculus]
Length = 385
Score = 72.4 bits (176), Expect = 8e-12
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ TD+ L F KYG++IE ++ DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVAQATK 86
>gb|AAD01997.1| heterogeneous nuclear ribonucleoprotein G [Macropus eugenii]
Length = 394
Score = 72.4 bits (176), Expect = 8e-12
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL+ T++ +L F KYG+++E ++ DRE+ +SRGF FIT+
Sbjct: 9 KLFVGGLNTETNEKALEAVFGKYGRIVEVLLMKDRETSKSRGFAFITFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANERT 385
M+GK LDG++I+V A + T
Sbjct: 69 MNGKLLDGKSIKVEQATKPT 88
>ref|XP_480007.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa (japonica cultivar-group)]
dbj|BAD03017.1| putative RNA recognition motif (RRM)-containing protein [Oryza
sativa (japonica cultivar-group)]
Length = 141
Score = 72.4 bits (176), Expect = 8e-12
Identities = 36/82 (43%), Positives = 48/82 (58%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
S LF+ GLS T L++ FAK+G+VI A+++ DR +G S+GFGF+ Y I
Sbjct: 35 SPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVEDAAKGI 94
Query: 320 TAMDGKTLDGRNIRVNHANERT 385
MDGK LDG I +A RT
Sbjct: 95 EGMDGKFLDGWVIFAEYARPRT 116
>ref|XP_914797.1| PREDICTED: similar to testes-specific heterogenous nuclear
ribonucleoprotein G-T [Mus musculus]
Length = 470
Score = 72.4 bits (176), Expect = 8e-12
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ TD+ L F KYG++IE ++ DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNLETDEKGLETAFGKYGRIIEVLLMKDRETSKSRGFAFVTFENPADAKAAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVAQATK 86
>ref|NP_193122.2| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAT41827.1| At4g13860 [Arabidopsis thaliana]
Length = 87
Score = 72.4 bits (176), Expect = 8e-12
Identities = 32/75 (42%), Positives = 50/75 (66%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
+++++VG LS T D LR+ F+ YG V++A ++ DR + RSRGFGF+TY+ +
Sbjct: 2 ATRVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAV 61
Query: 320 TAMDGKTLDGRNIRV 364
+ MDGK L+GR + V
Sbjct: 62 SGMDGKELNGRRVSV 76
>ref|ZP_01126486.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
gb|EAR22880.1| RNA-binding protein [Nitrococcus mobilis Nb-231]
Length = 94
Score = 72.4 bits (176), Expect = 8e-12
Identities = 34/78 (43%), Positives = 48/78 (61%)
Frame = +2
Query: 149 LFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAM 328
++VG L + + LR+ FA YG V +++ DR++GR RGFGF+T + I A+
Sbjct: 4 IYVGNLPFSASEDELRELFAAYGNVDSVRLMTDRDTGRPRGFGFVTMS-DTDAASAIEAL 62
Query: 329 DGKTLDGRNIRVNHANER 382
DGK GRN+RVN A ER
Sbjct: 63 DGKDFGGRNLRVNEAQER 80
>emb|CAG09825.1| unnamed protein product [Tetraodon nigroviridis]
Length = 391
Score = 72.0 bits (175), Expect = 1e-11
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T + +L F+KYG++ E ++ DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNTETTEKALEQFFSKYGRIAEVILMKDRETNKSRGFAFVTFESPSDAKDAARE 68
Query: 326 MDGKTLDGRNIRVNHANE---RTGGFR 397
M+GK+LDG+NI+V A + +GG R
Sbjct: 69 MNGKSLDGKNIKVEQATKPQFESGGRR 95
>gb|AAD00327.1| RBM1 [Macropus eugenii]
Length = 402
Score = 72.0 bits (175), Expect = 1e-11
Identities = 30/77 (38%), Positives = 49/77 (63%)
Frame = +2
Query: 149 LFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAM 328
LF+GGL+ GT++ L F KYG +++ ++ D+E+ +SRGF F+T+ M
Sbjct: 9 LFIGGLNVGTNEKDLESVFGKYGHIVKVLLMKDQETNKSRGFAFVTFESPAAAKDAARDM 68
Query: 329 DGKTLDGRNIRVNHANE 379
+GK LDG++I+V AN+
Sbjct: 69 NGKALDGKSIKVEQANK 85
>ref|XP_513540.1| PREDICTED: similar to kynurenine aminotransferase III [Pan
troglodytes]
Length = 1488
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ +L F KYG+++E +I DRE+ +SRGF F+T+
Sbjct: 329 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 388
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 389 MNGKSLDGKAIKVEQATK 406
>ref|ZP_00502429.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
gb|EAM41232.1| RNA-binding region RNP-1 (RNA recognition motif) [Polaromonas sp.
JS666]
Length = 151
Score = 71.6 bits (174), Expect = 1e-11
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Frame = +2
Query: 143 SKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT 322
+KL+VG L Y D L+ F ++G V AK++++R++GRS+GFGF+ I
Sbjct: 3 NKLYVGNLPYSVRDEDLQQSFGQFGSVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAIN 62
Query: 323 AMDGKTLDGRNIRVNHAN------ERTGGF 394
M+G+ L GR++ VN A R+GGF
Sbjct: 63 GMNGQPLGGRSVVVNEARPMEARPPRSGGF 92
>emb|CAI21694.1| novel protein similar to RNA binding motif protein, X-linked (RBMX)
[Homo sapiens]
Length = 159
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ +L F KYG+++E +I DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>gb|ABB92440.1| RBM1 [Cercopithecus sabaeus]
Length = 385
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ +L F KYG+++E +I DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>gb|ABB92439.1| RBM1 [Hylobates lar]
Length = 385
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ +L F KYG+++E +I DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>gb|ABB92438.1| RBM1 [Pongo pygmaeus]
Length = 385
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ +L F KYG+++E +I DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>gb|ABB92437.1| RBM1 [Gorilla gorilla]
gb|ABB92436.1| RBM1 [Pan troglodytes]
Length = 385
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ +L F KYG+++E +I DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>gb|ABB92435.1| RBM1 [Homo sapiens]
Length = 384
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ +L F KYG+++E +I DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>gb|AAM71380.1| RNA-binding protein [Chlorobium tepidum TLS]
ref|NP_661038.1| RNA-binding protein [Chlorobium tepidum TLS]
Length = 90
Score = 71.6 bits (174), Expect = 1e-11
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +2
Query: 149 LFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAM 328
+++G L Y D LRD+F+++GQV A II D+ SGRS+GFGF+ I AM
Sbjct: 3 IYIGNLPYSVTDEDLRDKFSEFGQVHSANIITDKFSGRSKGFGFVDMPNESEAREAIDAM 62
Query: 329 DGKTLDGRNIRVNHANER 382
+ K GR I+VN A R
Sbjct: 63 NDKDFKGRTIKVNEARPR 80
>ref|NP_062556.2| RNA binding motif protein, X-linked-like 1 [Homo sapiens]
emb|CAI21693.1| novel protein similar to RNA binding motif protein, X-linked (RBMX)
[Homo sapiens]
emb|CAI46148.1| hypothetical protein [Homo sapiens]
gb|AAH12942.1| RNA binding motif protein, X-linked-like 1 [Homo sapiens]
Length = 390
Score = 71.6 bits (174), Expect = 1e-11
Identities = 32/78 (41%), Positives = 50/78 (64%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GGL+ T++ +L F KYG+++E +I DRE+ +SRGF F+T+
Sbjct: 9 KLFIGGLNTETNEKALETVFGKYGRIVEVLLIKDRETNKSRGFAFVTFESPADAKDAARD 68
Query: 326 MDGKTLDGRNIRVNHANE 379
M+GK+LDG+ I+V A +
Sbjct: 69 MNGKSLDGKAIKVEQATK 86
>gb|AAW40908.1| transformer-2-beta isoform 3, putative [Cryptococcus neoformans
var. neoformans JEC21]
ref|XP_566727.1| transformer-2-beta isoform 3 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 277
Score = 71.6 bits (174), Expect = 1e-11
Identities = 38/98 (38%), Positives = 60/98 (61%)
Frame = +2
Query: 80 NATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESG 259
+A SKS S + + S++ L V GLS T + L+DEF+++G++ + I+ D+ +G
Sbjct: 104 DAIPSKSPPRSSHVFSKVKSTNILGVFGLSVRTTERDLQDEFSRHGEIEKVVIVYDQRTG 163
Query: 260 RSRGFGFITYTXXXXXXXXITAMDGKTLDGRNIRVNHA 373
RSRGFGFIT I ++G T+ GRNIRV+++
Sbjct: 164 RSRGFGFITMRSIEDATQCINKLNGFTIHGRNIRVDYS 201
>dbj|BAB08572.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 473
Score = 71.2 bits (173), Expect = 2e-11
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GG+S+ TD+ LRD F+ YG V+EA I+ DR +GR+RGFGFI + I
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-- 64
Query: 326 MDGKTLDGRNIRVNHANER 382
MD +DGR + A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 43.1 bits (100), Expect = 0.005
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITY 289
+ K+FVGGL + ++ F ++G + + ++ D + R RGFGFIT+
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF 158
>gb|AAM97088.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 448
Score = 71.2 bits (173), Expect = 2e-11
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GG+S+ TD+ LRD F+ YG V+EA I+ DR +GR+RGFGFI + I
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-- 64
Query: 326 MDGKTLDGRNIRVNHANER 382
MD +DGR + A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 43.1 bits (100), Expect = 0.005
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITY 289
+ K+FVGGL + ++ F ++G + + ++ D + R RGFGFIT+
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF 158
>ref|NP_851195.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
Length = 448
Score = 71.2 bits (173), Expect = 2e-11
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GG+S+ TD+ LRD F+ YG V+EA I+ DR +GR+RGFGFI + I
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-- 64
Query: 326 MDGKTLDGRNIRVNHANER 382
MD +DGR + A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 43.1 bits (100), Expect = 0.005
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITY 289
+ K+FVGGL + ++ F ++G + + ++ D + R RGFGFIT+
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF 158
>ref|NP_974937.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
ref|NP_568826.1| RNA binding / nucleic acid binding [Arabidopsis thaliana]
gb|AAM20100.1| putative RNA-binding protein [Arabidopsis thaliana]
gb|AAK92731.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 460
Score = 71.2 bits (173), Expect = 2e-11
Identities = 36/79 (45%), Positives = 48/79 (60%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLF+GG+S+ TD+ LRD F+ YG V+EA I+ DR +GR+RGFGFI + I
Sbjct: 7 KLFIGGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVI-- 64
Query: 326 MDGKTLDGRNIRVNHANER 382
MD +DGR + A R
Sbjct: 65 MDKHIIDGRTVEAKKAVPR 83
Score = 43.1 bits (100), Expect = 0.005
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITY 289
+ K+FVGGL + ++ F ++G + + ++ D + R RGFGFIT+
Sbjct: 109 TKKIFVGGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITF 158
>ref|XP_521047.1| PREDICTED: similar to Putative RNA-binding protein 3 (RNA binding
motif protein 3) (RNPL) [Pan troglodytes]
Length = 211
Score = 70.9 bits (172), Expect = 2e-11
Identities = 30/71 (42%), Positives = 48/71 (67%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITA 325
KLFVGGL++ TD+ +L D F+ +G + E ++ DRE+ RSRGFGFIT+T + A
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 326 MDGKTLDGRNI 358
M+G+ ++ ++
Sbjct: 67 MNGEVVESADL 77
>dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 70.9 bits (172), Expect = 2e-11
Identities = 35/86 (40%), Positives = 49/86 (56%)
Frame = +2
Query: 134 MSSSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXX 313
M++ K+FVG LSY + LR F+ GQV E II DRE+GRSRGF F+T++
Sbjct: 1 MANCKVFVGNLSYNATEDDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEAND 60
Query: 314 XITAMDGKTLDGRNIRVNHANERTGG 391
I ++ + GRN+ V A + G
Sbjct: 61 AIENLNESDVAGRNVSVRQAQSKRDG 86
>ref|ZP_00527479.1| RNA-binding region RNP-1 (RNA recognition motif) [Solibacter
usitatus Ellin6076]
gb|EAM53488.1| RNA-binding region RNP-1 (RNA recognition motif) [Solibacter
usitatus Ellin6076]
Length = 132
Score = 70.9 bits (172), Expect = 2e-11
Identities = 33/78 (42%), Positives = 47/78 (60%)
Frame = +2
Query: 149 LFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXITAM 328
+FVG L + + +R F +YGQV A+I+ DRE+GRSRGF F+ I+A+
Sbjct: 4 IFVGNLDFNASEEGVRSLFERYGQVNSARIMTDRETGRSRGFAFVEMENEGEADQAISAL 63
Query: 329 DGKTLDGRNIRVNHANER 382
+G TLDGR + VN A +
Sbjct: 64 NGYTLDGRALNVNEARPK 81
>gb|EAA00972.2| ENSANGP00000018356 [Anopheles gambiae str. PEST]
ref|XP_321133.2| ENSANGP00000018356 [Anopheles gambiae str. PEST]
Length = 218
Score = 70.9 bits (172), Expect = 2e-11
Identities = 36/89 (40%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXIT- 322
KLFVGGLS+ T +L+ F++YG+VI+ ++ + E+GRSRGFGF+T+ +
Sbjct: 77 KLFVGGLSWETSHENLQRYFSRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALEN 136
Query: 323 ---AMDGKTLDGR--NIRVNHANERTGGF 394
+DG+T+D + N R H +RTGG+
Sbjct: 137 GPHTLDGRTIDPKPCNPRSQHKPKRTGGY 165
Score = 47.8 bits (112), Expect = 2e-04
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +2
Query: 146 KLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITY 289
K+F+GGL + LR F +YG V+E I+ D+E +SRGFGF+++
Sbjct: 167 KVFLGGLPPNITETDLRSFFCRYGTVMEVVIMYDQEKKKSRGFGFLSF 214
>emb|CAE77994.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
ref|NP_967340.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
Length = 120
Score = 70.9 bits (172), Expect = 2e-11
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Frame = +2
Query: 140 SSKLFVGGLSYGTDDHSLRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTXXXXXXXXI 319
+ KL+VG L Y DD +L FA++G V AK+I+DRE+GRS+GFGF+ + I
Sbjct: 2 AKKLYVGNLPYSVDDEALHQHFAQFGAVDSAKVIMDRETGRSKGFGFVEMSDDSAADQAI 61
Query: 320 TAMDGKTLDGRNIRVNHAN---ERTGGFR 397
+G L GR I ++ A R GG R
Sbjct: 62 ERGNGIELGGRPINISEARPQAPREGGPR 90
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 749,974,246
Number of Sequences: 3454138
Number of extensions: 12620268
Number of successful extensions: 42407
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 38054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41317
length of database: 1,185,965,366
effective HSP length: 121
effective length of database: 768,014,668
effective search space used: 43776836076
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)