TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCH13e05.yg.2.1
(577 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD892843.1|CD892843 G118.122B24F010726 G118 Triticum aes... 210 7e-059
gb|BG608037.1|BG608037 WHE2496_A12_A24ZS Triticum monococcu... 226 1e-058
gb|BQ838089.1|BQ838089 WHE2906_D08_G16ZS Wheat aluminum-str... 217 9e-056
gb|CD490341.1|CD490341 WHE2496_A12_A24ZT Triticum monococcu... 215 5e-055
gb|CD892844.1|CD892844 G118.122B24R010926 G118 Triticum aes... 151 5e-036
gb|CK156671.1|CK156671 FGAS037678 Triticum aestivum FGAS: T... 141 5e-033
gb|CK157430.1|CK157430 FGAS038543 Triticum aestivum FGAS: T... 141 5e-033
gb|CK157595.1|CK157595 FGAS038739 Triticum aestivum FGAS: T... 141 5e-033
gb|CK157687.1|CK157687 FGAS038840 Triticum aestivum FGAS: T... 141 5e-033
gb|CK157545.1|CK157545 FGAS038681 Triticum aestivum FGAS: T... 140 1e-032
gb|CK156888.1|CK156888 FGAS037929 Triticum aestivum FGAS: T... 137 9e-032
gb|CK192907.1|CK192907 FGAS001313 Triticum aestivum FGAS: L... 131 8e-030
gb|BF200163.1|BF200163 WHE2252_F12_K24ZE Triticum monococcu... 119 3e-026
gb|CD491602.1|CD491602 WHE3092_C12_E24ZT CS wheat cold-stre... 114 1e-024
gb|BJ247659.1|BJ247659 BJ247659 Y. Ogihara unpublished cDNA... 111 5e-024
gb|CD872897.1|CD872897 AZO2.121N15F010209 AZO2 Triticum aes... 111 5e-024
gb|BJ297738.1|BJ297738 BJ297738 Y. Ogihara unpublished cDNA... 108 5e-023
gb|CD872898.1|CD872898 AZO2.121N15R010521 AZO2 Triticum aes... 103 2e-021
>gb|CD892843.1|CD892843 G118.122B24F010726 G118 Triticum aestivum cDNA clone G118122B24,
mRNA sequence
Length = 682
Score = 210 bits (452), Expect(2) = 7e-059
Identities = 81/101 (80%), Positives = 90/101 (89%)
Frame = -1 / +1
Query: 502 GYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCED 323
GYIVS+DIAKEVYRKHK GELKMFKLEDVAMGIWINEM+K+G DV Y+NDGRILVEGCED
Sbjct: 100 GYIVSQDIAKEVYRKHKRGELKMFKLEDVAMGIWINEMEKEGFDVTYQNDGRILVEGCED 279
Query: 322 GYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*QKSCEWCFM 200
GYV+AHYQEPR MMCLWD+FQKTKRG CC E* ++ + M
Sbjct: 280 GYVVAHYQEPRQMMCLWDKFQKTKRGNCCNE*GRTIFYVLM 402
Score = 163 bits (351), Expect(2) = 4e-047
Identities = 74/92 (80%), Positives = 79/92 (85%)
Frame = +3 / -3
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQ PRFVF N SQRHII LGSW* A T PSS PSTKILPSF Y+TSKPSF ISLIHI
Sbjct: 374 YSLQQFPRFVFWNLSQRHIICLGSW*WATTYPSSQPSTKILPSFWYVTSKPSFSISLIHI 195
Query: 408 PIATSSSLNIFNSPLLCFL*TSLAMSFETIYP 503
PIATSSSLNIF+SPLLCFL*TS A+S +T+YP
Sbjct: 194 PIATSSSLNIFSSPLLCFL*TSFAIS*DTMYP 99
Score = 129 bits (276), Expect(2) = 4e-034
Identities = 53/91 (58%), Positives = 65/91 (71%)
Frame = -3 / +3
Query: 500 IYCFKGHS*RSLQETQEWGVKDVQAGGCRNGNMDQ*DEEGWLGCQV*E*WEDFG*RMRGW 321
++C G+S RSLQETQ+ G KDVQAGGC +GNMDQ*D EG L C + E +D G R+ GW
Sbjct: 102 VHCISGYSKRSLQETQKRGAKDVQAGGCGDGNMDQ*DGEGRL*CHIPERRKDLGGRL*GW 281
Query: 320 LCDCSLPRTKGYDVPLGSVSENKTRNMLQRI 228
+C C LP K DVPLG + ENK R +LQR+
Sbjct: 282 VCGCPLPGAKADDVPLGQIPENKARKLLQRV 374
Score = 62.5 bits (130), Expect(3) = 7e-028
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / -2
Query: 398 DPYSHCDILQLEHL*LPTLVFPVNFFSYVL*NNI 499
DPYSH ILQLEHL*LP+ VFPVNFF Y+L N+
Sbjct: 204 DPYSHRHILQLEHL*LPSFVFPVNFFCYILRYNV 103
Score = 55.6 bits (115), Expect(3) = 7e-028
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / -2
Query: 260 LKLIPEAHHIPWFLVMSNHIAILASFNQNP 349
L+ +PEAHH+PW LV+ NHI IL +F+Q+P
Sbjct: 342 LEFVPEAHHLPWLLVVGNHIPILTAFHQDP 253
Score = 45.1 bits (92), Expect(2) = 4e-047
Identities = 18/25 (72%), Positives = 18/25 (72%)
Frame = +1 / -2
Query: 502 LVHAPREDNSPQAIPQGLCTTCYTD 576
LVH P DNS QAIP LCT CYTD
Sbjct: 99 LVHVPLGDNSLQAIPLKLCTPCYTD 25
Score = 44.1 bits (90), Expect(3) = 7e-028
Identities = 19/25 (76%), Positives = 19/25 (76%)
Frame = +2 / -3
Query: 503 WSMRPGRITLLRPFLRGYVPLAIRI 577
WSM P ITL RPFL YVPLAIRI
Sbjct: 98 WSMCPWGITLFRPFL*SYVPLAIRI 24
Score = 38.2 bits (77), Expect(2) = 7e-059
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2 / +1
Query: 576 IRIASGT*PLRNGLRRVILPGRMDQ 502
IRIA GT* RNGL+RVI G MDQ
Sbjct: 25 IRIARGT*LQRNGLKRVIPQGHMDQ 99
Score = 35.9 bits (72), Expect(2) = 4e-034
Identities = 18/25 (72%), Positives = 18/25 (72%)
Frame = -3 / +2
Query: 575 SV*QVVHNP*GMA*GELSSLGAWTR 501
SV*Q VHN GMA* ELS G WTR
Sbjct: 26 SV*QGVHNFRGMA*RELSPRGTWTR 100
>gb|BG608037.1|BG608037 WHE2496_A12_A24ZS Triticum monococcum early reproductive apex cDNA
library Triticum monococcum cDNA clone WHE2496_A12_A24,
mRNA sequence
Length = 549
Score = 226 bits (489), Expect = 1e-058
Identities = 90/114 (78%), Positives = 96/114 (84%)
Frame = -1 / +1
Query: 568 SKWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEM 389
SKWYIT WAHGPGYIVS+DIAKEVYRKHK GELKMFKLEDVAMGIWINEM
Sbjct: 1 SKWYITSEEWPEESYPPWAHGPGYIVSEDIAKEVYRKHKRGELKMFKLEDVAMGIWINEM 180
Query: 388 KKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE* 227
+K+G DV Y+NDGRILVEGCEDGYV+AHY EPR MMCLWD+FQKTKRG CC E*
Sbjct: 181 RKEGFDVTYQNDGRILVEGCEDGYVVAHYXEPRXMMCLWDKFQKTKRGNCCNE* 342
Score = 185 bits (398), Expect = 4e-046
Identities = 83/113 (73%), Positives = 87/113 (76%)
Frame = +3 / -2
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQ PRFVF N SQRHI LGSW* A T PSS PSTKILPSF Y+TSKPSF ISLIHI
Sbjct: 341 YSLQQFPRFVFWNLSQRHIXCLGSW*WATTYPSSQPSTKILPSFWYVTSKPSFLISLIHI 162
Query: 408 PIATSSSLNIFNSPLLCFL*TSLAMSFETIYPGPCAQXXXXXXXXXXXVMYHL 566
PIATSSSLNIF+SPLLCFL*TS AMS +T+YPGPCA VMYHL
Sbjct: 161 PIATSSSLNIFSSPLLCFL*TSFAMSSDTMYPGPCAHGG*LSSGHSSEVMYHL 3
Score = 169 bits (363), Expect = 3e-041
Identities = 72/113 (63%), Positives = 83/113 (73%)
Frame = -3 / +3
Query: 566 QVVHNP*GMA*GELSSLGAWTRIYCFKGHS*RSLQETQEWGVKDVQAGGCRNGNMDQ*DE 387
QVVHN GMA* ELS +G WTR++C GHS RSLQETQ+ G KDVQAGGC +GNMDQ*DE
Sbjct: 3 QVVHNFRGMA*RELSPMGTWTRVHCI*GHSKRSLQETQKRGAKDVQAGGCGDGNMDQ*DE 182
Query: 386 EGWLGCQV*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSVSENKTRNMLQRI 228
EG L C V E +D G R+ GW+C C LP K DVPLG + ENK R +LQR+
Sbjct: 183 EGRL*CHVPERRKDLGGRL*GWVCGCPLPXAKAXDVPLGQIPENKARKLLQRV 341
Score = 97.7 bits (207), Expect(2) = 2e-029
Identities = 42/57 (73%), Positives = 44/57 (77%)
Frame = +2 / -1
Query: 398 DPYSHCDILQLEHL*LPTLVFPVNFFSYVL*NNISWSMRPGRITLLRPFLRGYVPLA 568
DPYSH ILQLEHL*LP+ VFPVNFF YVL N+ WSM P ITL RPFL YVPLA
Sbjct: 171 DPYSHRHILQLEHL*LPSFVFPVNFFCYVLRYNVPWSMCPWGITLFRPFL*SYVPLA 1
Score = 91.3 bits (193), Expect(2) = 2e-025
Identities = 40/55 (72%), Positives = 44/55 (80%)
Frame = -2 / +2
Query: 567 ASGT*PLRNGLRRVILPGRMDQDILFQRT*LKKFTGNTRVGS*RCSSWRMSQWEY 403
ASGT* RNGL+RVI G MDQ L+ RT* KKFTGNT+ GS*RCSSWRM +WEY
Sbjct: 2 ASGT*LQRNGLKRVIPHGHMDQGTLYLRT*QKKFTGNTKEGS*RCSSWRMWRWEY 166
Score = 89.0 bits (188), Expect(2) = 1e-026
Identities = 39/55 (70%), Positives = 39/55 (70%)
Frame = +1 / -3
Query: 403 IFPLRHPPA*TSLTPHSCVSCKLL*LCPLKQYILVHAPREDNSPQAIPQGLCTTC 567
IFP HPPA*TSL P CVSCKLL LCP Q LVH P DNS QAIP LCTTC
Sbjct: 166 IFPSPHPPA*TSLAPLFCVSCKLLLLCPQIQCTLVHVPMGDNSLQAIPLKLCTTC 2
Score = 51.9 bits (107), Expect(2) = 2e-029
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +2 / -1
Query: 260 LKLIPEAHHIPWFLVMSNHIAILASFNQNP 349
L+ +PEAHH PW V+ NHI IL +F+Q+P
Sbjct: 309 LEFVPEAHHXPWLXVVGNHIPILTAFHQDP 220
Score = 51.5 bits (106), Expect(2) = 1e-026
Identities = 21/44 (47%), Positives = 26/44 (59%)
Frame = +1 / -3
Query: 214 RMISVILCNMFLVLFSETDPRGTSYPLVLGNEQSHSHPRILQPK 345
R ++ CN FL LFS PRGTS L G+ Q H+HP L P+
Sbjct: 355 RSFTLTRCNSFLALFSGICPRGTSXALAXGSGQPHTHPHSLPPR 224
Score = 45.1 bits (92), Expect(2) = 2e-025
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = -2 / +2
Query: 342 WLKDARMAM*LLITKNQGI*CASGISFRKQNEEHVA 235
W K RM M L T +QG *CASG + RKQ+EE VA
Sbjct: 227 WWKAVRMGMWLPTTXSQGX*CASGTNSRKQSEETVA 334
>gb|BQ838089.1|BQ838089 WHE2906_D08_G16ZS Wheat aluminum-stressed root tip cDNA library
Triticum aestivum cDNA clone WHE2906_D08_G16, mRNA
sequence
Length = 760
Score = 217 bits (468), Expect = 9e-056
Identities = 83/96 (86%), Positives = 90/96 (93%)
Frame = -1 / -3
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGYIVS+DIAKEV RKHK GELKMFKLEDVAMGIWINEM+K+G+DV Y+NDGRILVE
Sbjct: 725 AHGPGYIVSEDIAKEVSRKHKRGELKMFKLEDVAMGIWINEMRKEGIDVTYQNDGRILVE 546
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE* 227
GCEDGYV+AHYQEPR MMCLWD+FQKTKRG CC E*
Sbjct: 545 GCEDGYVVAHYQEPRQMMCLWDKFQKTKRGNCCNE* 438
Score = 174 bits (374), Expect = 9e-043
Identities = 77/96 (80%), Positives = 81/96 (84%)
Frame = +3 / +1
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQ PRFVF N SQRHII LGSW* A T PSS PSTKILPSF Y+TS PSF ISLIHI
Sbjct: 439 YSLQQFPRFVFWNLSQRHIICLGSW*WATTYPSSQPSTKILPSFWYVTSMPSFLISLIHI 618
Query: 408 PIATSSSLNIFNSPLLCFL*TSLAMSFETIYPGPCA 515
PIATSSSLNIF+SPLLCFL TS AMS +T+YPGPCA
Sbjct: 619 PIATSSSLNIFSSPLLCFLETSFAMSSDTMYPGPCA 726
Score = 152 bits (326), Expect = 4e-036
Identities = 64/106 (60%), Positives = 76/106 (71%)
Frame = -3 / -2
Query: 545 GMA*GELSSLGAWTRIYCFKGHS*RSLQETQEWGVKDVQAGGCRNGNMDQ*DEEGWLGCQ 366
GMA* +LS +G WTR++C GHS RS QETQ+ G KDVQAGGC +GNMDQ*DEEG C
Sbjct: 756 GMA*RKLSPMGTWTRVHCI*GHSKRSFQETQKRGAKDVQAGGCGDGNMDQ*DEEGRH*CH 577
Query: 365 V*E*WEDFG*RMRGWLCDCSLPRTKGYDVPLGSVSENKTRNMLQRI 228
V E +D G R+ GW+C C LP K DVPLG + ENK R +LQR+
Sbjct: 576 VPERRKDLGGRL*GWVCGCPLPGAKADDVPLGQIPENKARKLLQRV 439
Score = 82.6 bits (174), Expect(2) = 5e-026
Identities = 35/50 (70%), Positives = 37/50 (74%)
Frame = +2 / +3
Query: 398 DPYSHCDILQLEHL*LPTLVFPVNFFSYVL*NNISWSMRPGRITLLRPFL 547
DPYSH ILQLEHL*LP+ VFP NFF YVL N+ WSM P IT RPFL
Sbjct: 609 DPYSHRHILQLEHL*LPSFVFPGNFFCYVLRYNVPWSMCPWGITFFRPFL 758
Score = 80.3 bits (169), Expect(2) = 2e-022
Identities = 33/48 (68%), Positives = 38/48 (79%)
Frame = -2 / -1
Query: 546 RNGLRRVILPGRMDQDILFQRT*LKKFTGNTRVGS*RCSSWRMSQWEY 403
RNGL++VI G MDQ L+ RT* KKF GNT+ GS*RCSSWRM +WEY
Sbjct: 757 RNGLKKVIPHGHMDQGTLYLRT*QKKFPGNTKEGS*RCSSWRMWRWEY 614
Score = 55.6 bits (115), Expect(2) = 5e-026
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 260 LKLIPEAHHIPWFLVMSNHIAILASFNQNP 349
L+ +PEAHH+PW LV+ NHI IL +F+Q+P
Sbjct: 471 LEFVPEAHHLPWLLVVGNHIPILTAFHQDP 560
Score = 45.5 bits (93), Expect(2) = 2e-022
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = -2 / -1
Query: 342 WLKDARMAM*LLITKNQGI*CASGISFRKQNEEHVA 235
W K RM M L T++QG *CASG + RKQ+EE VA
Sbjct: 553 WWKAVRMGMWLPTTRSQGR*CASGTNSRKQSEETVA 446
>gb|CD490341.1|CD490341 WHE2496_A12_A24ZT Triticum monococcum DV92 early reproductive apex
cDNA library Triticum monococcum cDNA clone
WHE2496_A12_A24, mRNA sequence
Length = 710
Score = 215 bits (463), Expect = 5e-055
Identities = 82/94 (87%), Positives = 88/94 (93%)
Frame = -1 / -1
Query: 508 GPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGC 329
GPGYIVS+DIAKEVYRKHK GELKMFKLEDVAMGIWINEM+K+G DV Y+NDGRILVEGC
Sbjct: 710 GPGYIVSEDIAKEVYRKHKRGELKMFKLEDVAMGIWINEMRKEGFDVTYQNDGRILVEGC 531
Query: 328 EDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE* 227
EDGYV+AHYQEPR MMCLWD+FQKTKRG CC E*
Sbjct: 530 EDGYVVAHYQEPRQMMCLWDKFQKTKRGNCCNE* 429
Score = 170 bits (365), Expect = 1e-041
Identities = 76/93 (81%), Positives = 80/93 (86%)
Frame = +3 / +1
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YSLQ PRFVF N SQRHII LGSW* A T PSS PSTKILPSF Y+TSKPSF ISLIHI
Sbjct: 430 YSLQQFPRFVFWNLSQRHIICLGSW*WATTYPSSQPSTKILPSFWYVTSKPSFLISLIHI 609
Query: 408 PIATSSSLNIFNSPLLCFL*TSLAMSFETIYPG 506
PIATSSSLNIF+SPLLCFL*TS AMS +T+YPG
Sbjct: 610 PIATSSSLNIFSSPLLCFL*TSFAMSSDTMYPG 708
Score = 138 bits (296), Expect = 5e-032
Identities = 58/93 (62%), Positives = 68/93 (73%)
Frame = -3 / -3
Query: 506 TRIYCFKGHS*RSLQETQEWGVKDVQAGGCRNGNMDQ*DEEGWLGCQV*E*WEDFG*RMR 327
TR++C GHS RSLQETQ+ G KDVQAGGC +GNMDQ*DEEG L C V E +D G R+
Sbjct: 708 TRVHCI*GHSKRSLQETQKRGAKDVQAGGCGDGNMDQ*DEEGRL*CHVPERRKDLGGRL* 529
Query: 326 GWLCDCSLPRTKGYDVPLGSVSENKTRNMLQRI 228
GW+C C LP K DVPLG + ENK R +LQR+
Sbjct: 528 GWVCGCPLPGAKADDVPLGQIPENKARKLLQRV 430
Score = 69.3 bits (145), Expect(2) = 4e-022
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2 / +3
Query: 398 DPYSHCDILQLEHL*LPTLVFPVNFFSYVL*NNISWS 508
DPYSH ILQLEHL*LP+ VFPVNFF YVL N+ WS
Sbjct: 600 DPYSHRHILQLEHL*LPSFVFPVNFFCYVLRYNVPWS 710
Score = 55.6 bits (115), Expect(2) = 4e-022
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 260 LKLIPEAHHIPWFLVMSNHIAILASFNQNP 349
L+ +PEAHH+PW LV+ NHI IL +F+Q+P
Sbjct: 462 LEFVPEAHHLPWLLVVGNHIPILTAFHQDP 551
>gb|CD892844.1|CD892844 G118.122B24R010926 G118 Triticum aestivum cDNA clone G118122B24,
mRNA sequence
Length = 627
Score = 151 bits (325), Expect = 5e-036
Identities = 58/78 (74%), Positives = 66/78 (84%)
Frame = -1 / -3
Query: 433 FKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKT 254
F+LEDVAMGIWI+EM+K+G DV Y NDGRILVEGCEDGYV+A YQEPR MMCLWDQFQKT
Sbjct: 625 FQLEDVAMGIWIHEMEKEGFDVTYPNDGRILVEGCEDGYVVAPYQEPRQMMCLWDQFQKT 446
Query: 253 KRGTCCKE*QKSCEWCFM 200
KRG CC E* ++ + M
Sbjct: 445 KRGNCCHE*GRTIFYVLM 392
Score = 114 bits (244), Expect = 7e-025
Identities = 53/69 (76%), Positives = 54/69 (78%)
Frame = +3 / +3
Query: 228 YSLQHVPRFVF*N*SQRHIISLGSW**AIT*PSSHPSTKILPSFSYLTSKPSFFISLIHI 407
YS Q PR VF N SQRHII LGSW* A T PSS PSTKILPSF Y+TSKPSF IS IHI
Sbjct: 420 YSWQQFPRLVFWNWSQRHIICLGSW*GATTYPSSQPSTKILPSFGYVTSKPSFSISWIHI 599
Query: 408 PIATSSSLN 434
PIATSSS N
Sbjct: 600 PIATSSSWN 626
>gb|CK156671.1|CK156671 FGAS037678 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 855
Score = 141 bits (303), Expect = 5e-033
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = -1 / -1
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGY++S+D+AK V + H+ L++F+LEDVAMGIWI + K G V Y ND R E
Sbjct: 645 AHGPGYVISRDVAKFVVQGHQERTLQLFRLEDVAMGIWIQQYKDSGQQVNYANDERFYNE 466
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
GC+ YV+AHYQ PR MMCLW++ QK + CC+
Sbjct: 465 GCDSDYVLAHYQSPRLMMCLWEKLQKESQAVCCE 364
>gb|CK157430.1|CK157430 FGAS038543 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 872
Score = 141 bits (303), Expect = 5e-033
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = -1 / -2
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGY++S+D+AK V + H+ L++F+LEDVAMGIWI + K G V Y ND R E
Sbjct: 643 AHGPGYVISRDVAKFVVQGHQERTLQLFRLEDVAMGIWIQQYKDSGQQVNYANDERFYNE 464
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
GC+ YV+AHYQ PR MMCLW++ QK + CC+
Sbjct: 463 GCDSDYVLAHYQSPRLMMCLWEKLQKESQAVCCE 362
>gb|CK157595.1|CK157595 FGAS038739 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 877
Score = 141 bits (303), Expect = 5e-033
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = -1 / -1
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGY++S+D+AK V + H+ L++F+LEDVAMGIWI + K G V Y ND R E
Sbjct: 643 AHGPGYVISRDVAKFVVQGHQERTLQLFRLEDVAMGIWIQQYKDSGQQVNYANDERFYNE 464
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
GC+ YV+AHYQ PR MMCLW++ QK + CC+
Sbjct: 463 GCDSDYVLAHYQSPRLMMCLWEKLQKESQAVCCE 362
>gb|CK157687.1|CK157687 FGAS038840 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 870
Score = 141 bits (303), Expect = 5e-033
Identities = 51/94 (54%), Positives = 67/94 (71%)
Frame = -1 / -1
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGY++S+D+AK V + H+ L++F+LEDVAMGIWI + K G V Y ND R E
Sbjct: 642 AHGPGYVISRDVAKFVVQGHQERTLQLFRLEDVAMGIWIQQYKDSGQQVNYANDERFYNE 463
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
GC+ YV+AHYQ PR MMCLW++ QK + CC+
Sbjct: 462 GCDSDYVLAHYQSPRLMMCLWEKLQKESQAVCCE 361
>gb|CK157545.1|CK157545 FGAS038681 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 874
Score = 140 bits (300), Expect = 1e-032
Identities = 51/94 (54%), Positives = 66/94 (70%)
Frame = -1 / -2
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AHGPGY++S+D+AK V + H+ L++F+LEDVAMGIWI + K G V Y ND R E
Sbjct: 642 AHGPGYVISRDVAKFVVQGHQERTLQLFRLEDVAMGIWIQQYKDSGQQVNYANDERFYNE 463
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
GC+ YV+AHYQ PR MMCLW++ QK CC+
Sbjct: 462 GCDSDYVLAHYQSPRLMMCLWEKLQKESHTVCCE 361
>gb|CK156888.1|CK156888 FGAS037929 Triticum aestivum FGAS: TaLt4 Triticum aestivum cDNA,
mRNA sequence
Length = 872
Score = 137 bits (294), Expect = 9e-032
Identities = 50/94 (53%), Positives = 66/94 (70%)
Frame = -1 / -2
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
AH PGY++S+D+AK V + H+ L++F+LEDVAMGIWI + K G V Y ND R E
Sbjct: 643 AHVPGYVISRDVAKFVVQGHQERTLQLFRLEDVAMGIWIQQYKDSGQQVNYANDERFYNE 464
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
GC+ YV+AHYQ PR MMCLW++ QK + CC+
Sbjct: 463 GCDSDYVLAHYQSPRLMMCLWEKLQKESQAVCCE 362
>gb|CK192907.1|CK192907 FGAS001313 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 818
Score = 131 bits (280), Expect = 8e-030
Identities = 48/91 (52%), Positives = 64/91 (70%)
Frame = -1 / -2
Query: 505 PGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCE 326
P YI+S+D+AK V + H+ +L++F+LEDVAMGIWI + K G V Y ND R EGC+
Sbjct: 682 PRYIISRDVAKFVVQGHQERKLQLFRLEDVAMGIWIQQYKDSGQQVNYANDERFYNEGCD 503
Query: 325 DGYVIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
YV+AHYQ PR MMCLW++ QK + CC+
Sbjct: 502 SDYVLAHYQSPRLMMCLWEKLQKESQAVCCE 410
>gb|BF200163.1|BF200163 WHE2252_F12_K24ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE2252_F12_K24, mRNA
sequence
Length = 462
Score = 119 bits (254), Expect = 3e-026
Identities = 50/63 (79%), Positives = 51/63 (80%)
Frame = -1 / +2
Query: 577 DPYSKWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWI 398
DPYSKWYIT WAHGPGYIVS+DIAKEVYRKHK GELKMFKLEDVAMGIWI
Sbjct: 272 DPYSKWYITSEEWPEESYPPWAHGPGYIVSEDIAKEVYRKHKRGELKMFKLEDVAMGIWI 451
Query: 397 NEM 389
NEM
Sbjct: 452 NEM 460
Score = 107 bits (228), Expect = 1e-022
Identities = 47/63 (74%), Positives = 52/63 (82%)
Frame = -3 / +1
Query: 575 SV*QVVHNP*GMA*GELSSLGAWTRIYCFKGHS*RSLQETQEWGVKDVQAGGCRNGNMDQ 396
SV*QVVHN GMA* ELS +G WTR++C GHS RSLQETQ+ G KDVQAGGC +GNMDQ
Sbjct: 274 SV*QVVHNFRGMA*RELSPMGTWTRVHCI*GHSKRSLQETQKRGAKDVQAGGCGDGNMDQ 453
Query: 395 *DE 387
*DE
Sbjct: 454 *DE 462
Score = 105 bits (223), Expect = 6e-022
Identities = 45/62 (72%), Positives = 48/62 (77%)
Frame = +3 / -1
Query: 390 ISLIHIPIATSSSLNIFNSPLLCFL*TSLAMSFETIYPGPCAQXXXXXXXXXXXVMYHLL 569
ISLIHIPIATSSSLNIF+SPLLCFL*TS AMS +T+YPGPCA VMYHLL
Sbjct: 459 ISLIHIPIATSSSLNIFSSPLLCFL*TSFAMSSDTMYPGPCAHGG*LSSGHSSEVMYHLL 280
Query: 570 YG 575
YG
Sbjct: 279 YG 274
Score = 103 bits (220), Expect = 2e-021
Identities = 45/60 (75%), Positives = 47/60 (78%)
Frame = +2 / -3
Query: 398 DPYSHCDILQLEHL*LPTLVFPVNFFSYVL*NNISWSMRPGRITLLRPFLRGYVPLAIRI 577
DPYSH ILQLEHL*LP+ VFPVNFF YVL N+ WSM P ITL RPFL YVPLAIRI
Sbjct: 451 DPYSHRHILQLEHL*LPSFVFPVNFFCYVLRYNVPWSMCPWGITLFRPFL*SYVPLAIRI 272
>gb|CD491602.1|CD491602 WHE3092_C12_E24ZT CS wheat cold-stressed seedling subtracted cDNA
library Triticum aestivum cDNA clone WHE3092_C12_E24,
mRNA sequence
Length = 578
Score = 114 bits (243), Expect = 1e-024
Identities = 45/88 (51%), Positives = 58/88 (65%)
Frame = -1 / -2
Query: 496 IVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVEGCEDGY 317
I+S+DIAK V R H+ L++FKLEDVAMGIWI + K G V D R EGC+ Y
Sbjct: 574 IISRDIAKFVVRGHQELTLQLFKLEDVAMGIWIQQYKNSGQQVNIVTDDRFYNEGCDADY 395
Query: 316 VIAHYQEPRDMMCLWDQFQKTKRGTCCK 233
V+AHYQ PR MMCLW++ + + CC+
Sbjct: 394 VLAHYQTPRLMMCLWEKLKTEYQAICCE 311
>gb|BJ247659.1|BJ247659 BJ247659 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3c24 5', mRNA sequence
Length = 589
Score = 111 bits (238), Expect = 5e-024
Identities = 44/117 (37%), Positives = 66/117 (56%)
Frame = -1 / +2
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV+MG+W+ +
Sbjct: 35 KWAVTYEEWEEEVYPPYANGPGYVISSDIAEYIVSEFDNQALRLFKMEDVSMGMWVQKFS 214
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*QKSC 215
K V+Y +D + GC DGY AHYQ P+ M+CLW + Q C *Q C
Sbjct: 215 KTRQPVEYLHDVKFFQAGCFDGYYTAHYQSPQHMICLWRKLQSGSAQCCNAR*Q*DC 385
>gb|CD872897.1|CD872897 AZO2.121N15F010209 AZO2 Triticum aestivum cDNA clone AZO2121N15,
mRNA sequence
Length = 706
Score = 111 bits (238), Expect = 5e-024
Identities = 44/117 (37%), Positives = 66/117 (56%)
Frame = -1 / +2
Query: 565 KWYITXXXXXXXXXXXWAHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMK 386
KW +T +A+GPGY++S DIA+ + + + L++FK+EDV+MG+W+ +
Sbjct: 107 KWAVTYEEWEEEVYPPYANGPGYVISSDIAEYIVSEFDNQALRLFKMEDVSMGMWVQKFS 286
Query: 385 KDGLDVKYENDGRILVEGCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*QKSC 215
K V+Y +D + GC DGY AHYQ P+ M+CLW + Q C *Q C
Sbjct: 287 KTRQPVEYLHDVKFFQAGCFDGYYTAHYQSPQHMICLWRKLQSGSAQCCNAR*Q*DC 457
>gb|BJ297738.1|BJ297738 BJ297738 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl21n21 3', mRNA sequence
Length = 646
Score = 108 bits (231), Expect = 5e-023
Identities = 41/100 (41%), Positives = 61/100 (61%)
Frame = -1 / -2
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
A+GPGY++S DIA+ + + + L++FK+EDV+MG+W+ + K V+Y +D +
Sbjct: 516 ANGPGYVISSDIAEYIVSEFDNQALRLFKMEDVSMGMWVQKFSKTRQPVEYLHDVKFFQA 337
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*QKSC 215
GC DGY AHYQ P+ M+CLW + Q C *Q C
Sbjct: 336 GCFDGYYTAHYQSPQHMICLWRKLQSGSAQCCNAR*Q*DC 217
>gb|CD872898.1|CD872898 AZO2.121N15R010521 AZO2 Triticum aestivum cDNA clone AZO2121N15,
mRNA sequence
Length = 584
Score = 103 bits (219), Expect = 2e-021
Identities = 39/100 (39%), Positives = 60/100 (60%)
Frame = -1 / -3
Query: 514 AHGPGYIVSKDIAKEVYRKHKSGELKMFKLEDVAMGIWINEMKKDGLDVKYENDGRILVE 335
A+GPGY++S DIA+ + + + L++F++EDV+MG+W+ + K V+Y +D + L
Sbjct: 570 ANGPGYVISSDIAEYIVSEFDNQALRLFQMEDVSMGMWVQKFSKTRQPVEYLHDVKFLQA 391
Query: 334 GCEDGYVIAHYQEPRDMMCLWDQFQKTKRGTCCKE*QKSC 215
GC DGY AHY P+ M+CLW + Q C * C
Sbjct: 390 GCFDGYYTAHYPSPQHMICLWRKLQSGSAQCCNAR*P*DC 271
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 557,954,365
Number of Sequences: 636343
Number of extensions: 7731710
Number of successful extensions: 85746
Number of sequences better than 1.0e-020: 28
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 12415977203
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)