TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF18e02.yg.3.1
(315 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD921611.1|CD921611 G750.001E09F010309 G750 Triticum aes... 159 5e-043
gb|BQ841715.1|BQ841715 WHE2984_C08_E16ZS Wheat dormant embr... 159 5e-043
gb|DR736917.1|DR736917 FGAS082287 Triticum aestivum FGAS: L... 156 2e-041
gb|CA709889.1|CA709889 wdk2c.pk011.a23 wdk2c Triticum aesti... 155 7e-041
gb|BJ259831.1|BJ259831 BJ259831 Y. Ogihara unpublished cDNA... 132 7e-039
gb|CV770698.1|CV770698 FGAS065091 Triticum aestivum FGAS: L... 137 5e-032
gb|BJ271807.1|BJ271807 BJ271807 Y. Ogihara unpublished cDNA... 93 8e-027
gb|AJ615744.1|AJ615744 AJ615744 Triticum turgidum subsp. du... 72 2e-020
gb|AL830419.1|AL830419 AL830419 q:343 Triticum aestivum cDN... 78 3e-018
gb|CD903103.1|CD903103 G356.109C12F010919 G356 Triticum aes... 43 1e-013
gb|CA625698.1|CA625698 wl1n.pk0133.h12 wl1n Triticum aestiv... 32 2.7
gb|CD491242.1|CD491242 WHE3081_G08_N15ZT CS wheat cold-stre... 31 5.1
gb|CD909005.1|CD909005 G468.111I09R010929 G468 Triticum aes... 31 5.1
gb|CD914977.1|CD914977 G550.124L20R010920 G550 Triticum aes... 31 5.1
gb|CD919934.1|CD919934 G608.115D09R011026 G608 Triticum aes... 31 5.1
gb|BF429151.1|BF429151 WHE1709_B01_C01ZS Wheat heat stresse... 27 7.5
gb|BJ259119.1|BJ259119 BJ259119 Y. Ogihara unpublished cDNA... 27 9.0
>gb|CD921611.1|CD921611 G750.001E09F010309 G750 Triticum aestivum cDNA clone G750001E09,
mRNA sequence
Length = 700
Score = 159 bits (342), Expect(2) = 5e-043
Identities = 65/85 (76%), Positives = 75/85 (88%)
Frame = +3 / +2
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 239
HISYF IDSY+KLV +V+K SVEI PNKGS+L KI+SVT+R IQKDAEEKKASFNPRPY
Sbjct: 275 HISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPKILSVTIRVIQKDAEEKKASFNPRPY 454
Query: 240 FRLXINWLYDLTTTDGHHDGSNFQV 314
FRL INWL DL+T++ HHDG+NFQV
Sbjct: 455 FRLFINWLNDLSTSELHHDGANFQV 529
Score = 112 bits (240), Expect = 1e-024
Identities = 54/84 (64%), Positives = 59/84 (70%)
Frame = -3 / -2
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGV 134
T KL PS*W SQ I +RKYGRGLNEAFFSSASF*M L VT+ IL LPLFG
Sbjct: 528 TWKLAPS*WSSEVLRSFSQLINSRKYGRGLNEAFFSSASF*MTLIVTDNILGRRLPLFGP 349
Query: 133 ISTEEYLRTITTSFAYESMEKYEI 62
ISTE++ T TSF YESM KY+I
Sbjct: 348 ISTEQFFITTDTSFEYESMGKYDI 277
Score = 111 bits (238), Expect = 2e-024
Identities = 50/85 (58%), Positives = 62/85 (72%)
Frame = -2 / -1
Query: 314 NLKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWC 135
NL+I +IMM S+KVI+PI Q +VWSG+K*SFL SIFLN P+ + LGK AFIW
Sbjct: 529 NLEISSIMMEFRSTKVIQPIDKQPKVWSGVK*SFLLFSIFLNDPNCH*QYLGKKAAFIWS 350
Query: 134 YLH*RVLENHNHELCI*INGKI*NM 60
Y H* +L +H H+L I*ING+I* M
Sbjct: 349 YFH*TILYHHRHKLRI*INGEI*YM 275
Score = 94.5 bits (200), Expect(2) = 2e-022
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = +2 / +1
Query: 44 ITTATPYFIFFH*FICKARGYGSQVLFSGDNTK*RQYTFQDYFCYCEDHSERC*GKESFI 223
++ Y IF H*FI +A G + LFSG+ TK*RQ + QD HSERC* +ESFI
Sbjct: 259 VSAVITYIIFPH*FIFEACVCGDKELFSGNRTK*RQPSSQDIVSDN*GHSERC*REESFI 438
Query: 224 *SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
* PTIL VY+LA *P Y+* PS*W *F G
Sbjct: 439 *PPTILSAVYQLAE*P*YF*TPS*WS*FPG 528
Score = 54.2 bits (112), Expect(2) = 3e-014
Identities = 29/42 (69%), Positives = 29/42 (69%)
Frame = -1 / -3
Query: 315 KPEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
KP N* HHDG Q *GH AN T SMVG *MKLS QHLSE
Sbjct: 530 KPGN*LHHDGVQKY*GHSAN**TAESMVGG*MKLSSLQHLSE 405
Score = 44.1 bits (90), Expect(2) = 1e-010
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 52 SNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
S+ I+HI PLIH++S LW +QW+* QIKA +
Sbjct: 267 SHHIYHISPLIHIRSLCLW**RIVQWK*DQIKAAF 371
Score = 41.8 bits (85), Expect(2) = 3e-014
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -1 / -3
Query: 150 CLYLVLSPLKST*EP*PRALHMNQWKNMKY 61
CLYLVL PL ++ P +A +MNQW NM Y
Sbjct: 365 CLYLVLFPLNNSLSPQTQASNMNQWGNMIY 276
Score = 39.6 bits (80), Expect(2) = 1e-010
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 196 KMLRKRKLHLIPDHTSDCX*IG 261
KML++RKLHL PDHT C IG
Sbjct: 411 KMLKRRKLHLTPDHTFGCLSIG 476
Score = 33.6 bits (67), Expect(2) = 5e-043
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITT 52
SL AN CSWWI+SA+ T
Sbjct: 226 SL*AN*CSWWIVSAVIT 276
Score = 29.0 bits (57), Expect(2) = 2e-022
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHH 51
*S SKL+LLVD LS+HH
Sbjct: 225 *SLSKLMLLVDCLSSHH 275
>gb|BQ841715.1|BQ841715 WHE2984_C08_E16ZS Wheat dormant embryo cDNA library Triticum
aestivum cDNA clone WHE2984_C08_E16, mRNA sequence
Length = 738
Score = 159 bits (342), Expect(2) = 5e-043
Identities = 65/85 (76%), Positives = 75/85 (88%)
Frame = +3 / +2
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 239
HISYF IDSY+KLV +V+K SVEI PNKGS+L KI+SVT+R IQKDAEEKKASFNPRPY
Sbjct: 203 HISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPKILSVTIRVIQKDAEEKKASFNPRPY 382
Query: 240 FRLXINWLYDLTTTDGHHDGSNFQV 314
FRL INWL DL+T++ HHDG+NFQV
Sbjct: 383 FRLFINWLNDLSTSELHHDGANFQV 457
Score = 112 bits (240), Expect = 1e-024
Identities = 54/84 (64%), Positives = 59/84 (70%)
Frame = -3 / -1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGV 134
T KL PS*W SQ I +RKYGRGLNEAFFSSASF*M L VT+ IL LPLFG
Sbjct: 456 TWKLAPS*WSSEVLRSFSQLINSRKYGRGLNEAFFSSASF*MTLIVTDNILGRRLPLFGP 277
Query: 133 ISTEEYLRTITTSFAYESMEKYEI 62
ISTE++ T TSF YESM KY+I
Sbjct: 276 ISTEQFFITTDTSFEYESMGKYDI 205
Score = 111 bits (238), Expect = 2e-024
Identities = 50/85 (58%), Positives = 62/85 (72%)
Frame = -2 / -3
Query: 314 NLKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWC 135
NL+I +IMM S+KVI+PI Q +VWSG+K*SFL SIFLN P+ + LGK AFIW
Sbjct: 457 NLEISSIMMEFRSTKVIQPIDKQPKVWSGVK*SFLLFSIFLNDPNCH*QYLGKKAAFIWS 278
Query: 134 YLH*RVLENHNHELCI*INGKI*NM 60
Y H* +L +H H+L I*ING+I* M
Sbjct: 277 YFH*TILYHHRHKLRI*INGEI*YM 203
Score = 94.5 bits (200), Expect(2) = 3e-022
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = +2 / +1
Query: 44 ITTATPYFIFFH*FICKARGYGSQVLFSGDNTK*RQYTFQDYFCYCEDHSERC*GKESFI 223
++ Y IF H*FI +A G + LFSG+ TK*RQ + QD HSERC* +ESFI
Sbjct: 187 VSAVITYIIFPH*FIFEACVCGDKELFSGNRTK*RQPSSQDIVSDN*GHSERC*REESFI 366
Query: 224 *SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
* PTIL VY+LA *P Y+* PS*W *F G
Sbjct: 367 *PPTILSAVYQLAE*P*YF*TPS*WS*FPG 456
Score = 54.2 bits (112), Expect(2) = 4e-014
Identities = 29/42 (69%), Positives = 29/42 (69%)
Frame = -1 / -2
Query: 315 KPEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
KP N* HHDG Q *GH AN T SMVG *MKLS QHLSE
Sbjct: 458 KPGN*LHHDGVQKY*GHSAN**TAESMVGG*MKLSSLQHLSE 333
Score = 44.1 bits (90), Expect(2) = 2e-010
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 52 SNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
S+ I+HI PLIH++S LW +QW+* QIKA +
Sbjct: 195 SHHIYHISPLIHIRSLCLW**RIVQWK*DQIKAAF 299
Score = 41.8 bits (85), Expect(2) = 4e-014
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -1 / -2
Query: 150 CLYLVLSPLKST*EP*PRALHMNQWKNMKY 61
CLYLVL PL ++ P +A +MNQW NM Y
Sbjct: 293 CLYLVLFPLNNSLSPQTQASNMNQWGNMIY 204
Score = 39.6 bits (80), Expect(2) = 2e-010
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 196 KMLRKRKLHLIPDHTSDCX*IG 261
KML++RKLHL PDHT C IG
Sbjct: 339 KMLKRRKLHLTPDHTFGCLSIG 404
Score = 33.6 bits (67), Expect(2) = 5e-043
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITT 52
SL AN CSWWI+SA+ T
Sbjct: 154 SL*AN*CSWWIVSAVIT 204
Score = 29.0 bits (57), Expect(2) = 3e-022
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHH 51
*S SKL+LLVD LS+HH
Sbjct: 153 *SLSKLMLLVDCLSSHH 203
>gb|DR736917.1|DR736917 FGAS082287 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1091
Score = 156 bits (336), Expect(2) = 2e-041
Identities = 64/85 (75%), Positives = 74/85 (87%)
Frame = +3 / +3
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 239
HISYF IDSY+KLV +V+K SVEI PNKGS+L KI+SVT+R IQKDAEEKKASFNPRPY
Sbjct: 384 HISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPKILSVTIRVIQKDAEEKKASFNPRPY 563
Query: 240 FRLXINWLYDLTTTDGHHDGSNFQV 314
FRL INWL DL+T++ HHDG+N QV
Sbjct: 564 FRLFINWLNDLSTSELHHDGANIQV 638
Score = 111 bits (236), Expect = 4e-024
Identities = 50/85 (58%), Positives = 61/85 (71%)
Frame = -2 / -1
Query: 314 NLKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWC 135
NL I +IMM S+KVI+PI Q +VWSG+K*SFL SIFLN P+ + LGK AFIW
Sbjct: 638 NLDISSIMMEFRSTKVIQPIDKQPKVWSGVK*SFLLFSIFLNDPNCH*QYLGKKAAFIWS 459
Query: 134 YLH*RVLENHNHELCI*INGKI*NM 60
Y H* +L +H H+L I*ING+I* M
Sbjct: 458 YFH*TILYHHRHKLRI*INGEI*YM 384
Score = 110 bits (234), Expect = 7e-024
Identities = 52/81 (64%), Positives = 57/81 (70%)
Frame = -3 / -2
Query: 304 LEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGVIST 125
L PS*W SQ I +RKYGRGLNEAFFSSASF*M L VT+ IL LPLFG IST
Sbjct: 628 LAPS*WSSEVLRSFSQLINSRKYGRGLNEAFFSSASF*MTLIVTDNILGRRLPLFGPIST 449
Query: 124 EEYLRTITTSFAYESMEKYEI 62
E++ T TSF YESM KY+I
Sbjct: 448 EQFFITTDTSFEYESMGKYDI 386
Score = 95.5 bits (202), Expect(2) = 6e-022
Identities = 50/90 (55%), Positives = 60/90 (66%)
Frame = +2 / +2
Query: 44 ITTATPYFIFFH*FICKARGYGSQVLFSGDNTK*RQYTFQDYFCYCEDHSERC*GKESFI 223
++T Y IF H*FI +A G + LFSG+ TK*RQ + QD HSERC* +ESFI
Sbjct: 368 VSTVITYIIFPH*FIFEACVCGDKELFSGNRTK*RQPSSQDIVSDN*GHSERC*REESFI 547
Query: 224 *SPTILPIVYKLAL*PYYY*WPS*WF*FSG 313
* PTIL VY+LA *P Y+* PS*W *+ G
Sbjct: 548 *PPTILSAVYQLAE*P*YF*TPS*WS*YPG 637
Score = 50.6 bits (104), Expect(2) = 3e-013
Identities = 28/42 (66%), Positives = 28/42 (66%)
Frame = -1 / -3
Query: 315 KPEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
KP * HHDG Q *GH AN T SMVG *MKLS QHLSE
Sbjct: 639 KPGY*LHHDGVQKY*GHSAN**TAESMVGG*MKLSSLQHLSE 514
Score = 44.6 bits (91), Expect(2) = 2e-010
Identities = 18/36 (50%), Positives = 26/36 (72%)
Frame = +1 / +1
Query: 49 HSNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
+S+ I+HI PLIH++S LW +QW+* QIKA +
Sbjct: 373 NSHHIYHISPLIHIRSLCLW**RIVQWK*DQIKAAF 480
Score = 43.2 bits (88), Expect(2) = 3e-013
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = -1 / -3
Query: 150 CLYLVLSPLKST*EP*PRALHMNQWKNMKYGVAVVIAEMIH 28
CLYLVL PL ++ P +A +MNQW NM Y + V H
Sbjct: 474 CLYLVLFPLNNSLSPQTQASNMNQWGNMIYVMTVETIHQEH 352
Score = 39.6 bits (80), Expect(2) = 2e-010
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1 / +1
Query: 196 KMLRKRKLHLIPDHTSDCX*IG 261
KML++RKLHL PDHT C IG
Sbjct: 520 KMLKRRKLHLTPDHTFGCLSIG 585
Score = 31.8 bits (63), Expect(2) = 2e-041
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / +2
Query: 2 SLRANCCSWWIISAITT 52
SL AN CSWWI+S + T
Sbjct: 335 SL*AN*CSWWIVSTVIT 385
Score = 27.6 bits (54), Expect(2) = 6e-022
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 1 *SPSKLLLLVDHLSNHH 51
*S SKL+LLVD L++HH
Sbjct: 334 *SLSKLMLLVDCLNSHH 384
>gb|CA709889.1|CA709889 wdk2c.pk011.a23 wdk2c Triticum aestivum cDNA clone wdk2c.pk011.a23
5' end, mRNA sequence
Length = 551
Score = 155 bits (333), Expect(2) = 7e-041
Identities = 63/84 (75%), Positives = 73/84 (86%)
Frame = +3 / +2
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 239
HISYF IDSY+KLV +V+K SVEI PNKGS+L KI+SVT+R IQKDAEEKKASFNPRPY
Sbjct: 38 HISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPKILSVTIRVIQKDAEEKKASFNPRPY 217
Query: 240 FRLXINWLYDLTTTDGHHDGSNFQ 311
FR INWL DL+T++ HHDG+NFQ
Sbjct: 218 FRXFINWLNDLSTSELHHDGANFQ 289
Score = 111 bits (237), Expect = 3e-024
Identities = 53/82 (64%), Positives = 57/82 (69%)
Frame = -3 / -3
Query: 307 KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGVIS 128
KL PS*W SQ I RKYGRGLNEAFFSSASF*M L VT+ IL LPLFG IS
Sbjct: 285 KLAPS*WSSEVLRSFSQLINXRKYGRGLNEAFFSSASF*MTLIVTDNILGRRLPLFGPIS 106
Query: 127 TEEYLRTITTSFAYESMEKYEI 62
TE++ T TSF YESM KY+I
Sbjct: 105 TEQFFITTDTSFEYESMGKYDI 40
Score = 106 bits (226), Expect = 9e-023
Identities = 48/84 (57%), Positives = 60/84 (71%)
Frame = -2 / -2
Query: 311 LKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWCY 132
L+I +IMM S+KVI+PI +VWSG+K*SFL SIFLN P+ + LGK AFIW Y
Sbjct: 289 LEISSIMMEFRSTKVIQPIDKXPKVWSGVK*SFLLFSIFLNDPNCH*QYLGKKAAFIWSY 110
Query: 131 LH*RVLENHNHELCI*INGKI*NM 60
H* +L +H H+L I*ING+I* M
Sbjct: 109 FH*TILYHHRHKLRI*INGEI*YM 38
Score = 92.3 bits (195), Expect(2) = 3e-020
Identities = 49/88 (55%), Positives = 58/88 (65%)
Frame = +2 / +1
Query: 44 ITTATPYFIFFH*FICKARGYGSQVLFSGDNTK*RQYTFQDYFCYCEDHSERC*GKESFI 223
++ Y IF H*FI +A G + LFSG+ TK*RQ + QD HSERC* +ESFI
Sbjct: 22 VSAVITYIIFPH*FIFEACVCGDKELFSGNRTK*RQPSSQDIVSDN*GHSERC*REESFI 201
Query: 224 *SPTILPIVYKLAL*PYYY*WPS*WF*F 307
* PTIL VY+LA *P Y+* PS*W *F
Sbjct: 202 *PPTILSXVYQLAE*P*YF*TPS*WS*F 285
Score = 49.6 bits (102), Expect(2) = 6e-013
Identities = 27/39 (69%), Positives = 27/39 (69%)
Frame = -1 / -1
Query: 306 N*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
N* HHDG Q *GH AN T SMVG *MKLS QHLSE
Sbjct: 284 N*LHHDGVQKY*GHSAN**TXESMVGG*MKLSSLQHLSE 168
Score = 44.1 bits (90), Expect(2) = 1e-010
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 52 SNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
S+ I+HI PLIH++S LW +QW+* QIKA +
Sbjct: 30 SHHIYHISPLIHIRSLCLW**RIVQWK*DQIKAAF 134
Score = 41.8 bits (85), Expect(2) = 6e-013
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -1 / -1
Query: 150 CLYLVLSPLKST*EP*PRALHMNQWKNMKY 61
CLYLVL PL ++ P +A +MNQW NM Y
Sbjct: 128 CLYLVLFPLNNSLSPQTQASNMNQWGNMIY 39
Score = 39.6 bits (80), Expect(2) = 1e-010
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 196 KMLRKRKLHLIPDHTSDCX*IG 261
KML++RKLHL PDHT C IG
Sbjct: 174 KMLKRRKLHLTPDHTFGCLSIG 239
Score = 29.9 bits (59), Expect(2) = 7e-041
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 14 NCCSWWIISAITT 52
N CSWWI+SA+ T
Sbjct: 1 N*CSWWIVSAVIT 39
Score = 24.0 bits (46), Expect(2) = 3e-020
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 16 LLLLVDHLSNHH 51
L+LLVD LS+HH
Sbjct: 3 LMLLVDCLSSHH 38
>gb|BJ259831.1|BJ259831 BJ259831 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh22h02 5', mRNA sequence
Length = 628
Score = 132 bits (283), Expect(3) = 7e-039
Identities = 55/70 (78%), Positives = 61/70 (87%)
Frame = +3 / +1
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPY 239
HISYF IDSY+KLV +V+K SVEI PNKGS+L KI+SVT+R IQKDAEEKKASFNPRPY
Sbjct: 307 HISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPKILSVTIRVIQKDAEEKKASFNPRPY 486
Query: 240 FRLXINWLYD 269
FRL INWL D
Sbjct: 487 FRLFINWLND 516
Score = 100 bits (214), Expect = 4e-021
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = -3 / -3
Query: 259 QFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGVISTEEYLRTITTSFAYES 80
Q I +RKYGRGLNEAFFSSASF*M L VT+ IL LPLFG ISTE++ T TSF YES
Sbjct: 506 QLINSRKYGRGLNEAFFSSASF*MTLIVTDNILGRRLPLFGPISTEQFFITTDTSFEYES 327
Query: 79 MEKYEI 62
M KY+I
Sbjct: 326 MGKYDI 309
Score = 95.9 bits (203), Expect = 1e-019
Identities = 42/71 (59%), Positives = 52/71 (73%)
Frame = -2 / -2
Query: 272 KVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWCYLH*RVLENHNHEL 93
+VI+PI Q +VWSG+K*SFL SIFLN P+ + LGK AFIW Y H* +L +H H+L
Sbjct: 519 RVIQPIDKQPKVWSGVK*SFLLFSIFLNDPNCH*QYLGKKAAFIWSYFH*TILYHHRHKL 340
Query: 92 CI*INGKI*NM 60
I*ING+I* M
Sbjct: 339 RI*INGEI*YM 307
Score = 77.1 bits (162), Expect(2) = 3e-017
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = +2 / +3
Query: 44 ITTATPYFIFFH*FICKARGYGSQVLFSGDNTK*RQYTFQDYFCYCEDHSERC*GKESFI 223
++ Y IF H*FI +A G + LFSG+ TK*RQ + QD HSERC* +ESFI
Sbjct: 291 VSAVITYIIFPH*FIFEACVCGDKELFSGNRTK*RQPSSQDIVSDN*GHSERC*REESFI 470
Query: 224 *SPTILPIVYKLAL*P 271
* PTIL VY+LA *P
Sbjct: 471 *PPTILSAVYQLAE*P 518
Score = 44.1 bits (90), Expect(2) = 1e-010
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +2
Query: 52 SNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
S+ I+HI PLIH++S LW +QW+* QIKA +
Sbjct: 299 SHHIYHISPLIHIRSLCLW**RIVQWK*DQIKAAF 403
Score = 41.8 bits (85), Expect(2) = 3e-009
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -1 / -1
Query: 150 CLYLVLSPLKST*EP*PRALHMNQWKNMKY 61
CLYLVL PL ++ P +A +MNQW NM Y
Sbjct: 397 CLYLVLFPLNNSLSPQTQASNMNQWGNMIY 308
Score = 39.6 bits (80), Expect(2) = 1e-010
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1 / +2
Query: 196 KMLRKRKLHLIPDHTSDCX*IG 261
KML++RKLHL PDHT C IG
Sbjct: 443 KMLKRRKLHLTPDHTFGCLSIG 508
Score = 37.3 bits (75), Expect(2) = 3e-009
Identities = 19/27 (70%), Positives = 19/27 (70%)
Frame = -1 / -1
Query: 270 GHRANLXTIGSMVGD*MKLSFPQHLSE 190
GH AN T SMVG *MKLS QHLSE
Sbjct: 517 GHSAN**TAESMVGG*MKLSSLQHLSE 437
Score = 33.6 bits (67), Expect(3) = 7e-039
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +3
Query: 2 SLRANCCSWWIISAITT 52
SL AN CSWWI+SA+ T
Sbjct: 258 SL*AN*CSWWIVSAVIT 308
Score = 29.9 bits (59), Expect(3) = 7e-039
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +3 / +2
Query: 270 LTTTDGHHDGSNFQV 314
L+T++ HHDG+NFQV
Sbjct: 518 LSTSELHHDGANFQV 562
Score = 29.0 bits (57), Expect(2) = 3e-017
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 1 *SPSKLLLLVDHLSNHH 51
*S SKL+LLVD LS+HH
Sbjct: 257 *SLSKLMLLVDCLSSHH 307
>gb|CV770698.1|CV770698 FGAS065091 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 852
Score = 137 bits (293), Expect = 5e-032
Identities = 56/75 (74%), Positives = 66/75 (88%)
Frame = +3 / +2
Query: 90 AKLVVMVLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYD 269
+KLV +V+K SVEI PNKGS+L KI+SVT+R IQKDAEEKKASFNPRPYFRL INWL D
Sbjct: 107 SKLVSVVIKNCSVEIGPNKGSLLPKILSVTIRVIQKDAEEKKASFNPRPYFRLFINWLND 286
Query: 270 LTTTDGHHDGSNFQV 314
L+T++ HHDG+NFQV
Sbjct: 287 LSTSELHHDGANFQV 331
Score = 99.6 bits (211), Expect = 1e-020
Identities = 42/74 (56%), Positives = 53/74 (71%)
Frame = -2 / -3
Query: 314 NLKIRTIMMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWC 135
NL+I +IMM S+KVI+PI Q +VWSG+K*SFL SIFLN P+ + LGK AFIW
Sbjct: 331 NLEISSIMMEFRSTKVIQPIDKQPKVWSGVK*SFLLFSIFLNDPNCH*QYLGKKAAFIWS 152
Query: 134 YLH*RVLENHNHEL 93
Y H* +L +H H+L
Sbjct: 151 YFH*TILYHHRHKL 110
Score = 96.4 bits (204), Expect = 1e-019
Identities = 47/74 (63%), Positives = 51/74 (68%)
Frame = -3 / -1
Query: 313 T*KLEPS*WPXXXXXXXSQFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGV 134
T KL PS*W SQ I +RKYGRGLNEAFFSSASF*M L VT+ IL LPLFG
Sbjct: 330 TWKLAPS*WSSEVLRSFSQLINSRKYGRGLNEAFFSSASF*MTLIVTDNILGRRLPLFGP 151
Query: 133 ISTEEYLRTITTSF 92
ISTE++ T TSF
Sbjct: 150 ISTEQFFITTDTSF 109
Score = 81.3 bits (171), Expect = 3e-015
Identities = 42/69 (60%), Positives = 48/69 (69%)
Frame = +2 / +1
Query: 107 GSQVLFSGDNTK*RQYTFQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLAL*PYYY*W 286
G + LFSG+ TK*RQ + QD HSERC* +ESFI* PTIL VY+LA *P Y+*
Sbjct: 124 GDKELFSGNRTK*RQPSSQDIVSDN*GHSERC*REESFI*PPTILSAVYQLAE*P*YF*T 303
Query: 287 PS*WF*FSG 313
PS*W *F G
Sbjct: 304 PS*WS*FPG 330
Score = 54.2 bits (112), Expect(2) = 1e-008
Identities = 29/42 (69%), Positives = 29/42 (69%)
Frame = -1 / -2
Query: 315 KPEN*NHHDGHQ***GHRANLXTIGSMVGD*MKLSFPQHLSE 190
KP N* HHDG Q *GH AN T SMVG *MKLS QHLSE
Sbjct: 332 KPGN*LHHDGVQKY*GHSAN**TAESMVGG*MKLSSLQHLSE 207
Score = 39.6 bits (80), Expect(2) = 2e-004
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 196 KMLRKRKLHLIPDHTSDCX*IG 261
KML++RKLHL PDHT C IG
Sbjct: 213 KMLKRRKLHLTPDHTFGCLSIG 278
Score = 24.0 bits (46), Expect(2) = 1e-008
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 150 CLYLVLSPLKST*EP 106
CLYLVL PL ++ P
Sbjct: 167 CLYLVLFPLNNSLSP 123
Score = 24.0 bits (46), Expect(2) = 2e-004
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1 / +3
Query: 91 QSSWLWFSSTLQWR*HQIKAVY 156
+S LW +QW+* QIKA +
Sbjct: 108 RSLCLW**RIVQWK*DQIKAAF 173
>gb|BJ271807.1|BJ271807 BJ271807 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh27j09 5', mRNA sequence
Length = 683
Score = 93.2 bits (197), Expect(2) = 8e-027
Identities = 38/55 (69%), Positives = 45/55 (81%)
Frame = +3 / +3
Query: 126 VEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPRPYFRLXINWLYDLTTTDGH 290
V++ PNKGS+L KI+S+T R IQKDAEEKK SFNPRPYFRL IN L +L+T D H
Sbjct: 513 VDLGPNKGSLLLKILSITTRIIQKDAEEKKVSFNPRPYFRLFINLLSELSTADLH 677
Score = 64.8 bits (135), Expect(2) = 6e-016
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = -3 / -2
Query: 259 QFIXNRKYGRGLNEAFFSSASF*MVLTVTEIILESILPLFGVIST 125
+FI N KYGRGL E FFSSASF*M+L V E I LPLFG ST
Sbjct: 646 KFINNLKYGRGLKETFFSSASF*MILVVMERIFRRRLPLFGPKST 512
Score = 58.8 bits (122), Expect(2) = 3e-014
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = -2 / -1
Query: 293 MMAISSSKVIEPIYXQSEVWSGIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWCYLH 126
+M +SS+K+ IY S++W I+ +FLF SIFLN P NL K AF+W +H
Sbjct: 680 IMKVSSAKLT*QIYK*SKIWPRIERNFLFFSIFLNDPSGYGENLQKKAAFVWS*IH 513
Score = 45.5 bits (93), Expect(2) = 8e-027
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +2 / +2
Query: 11 ANCCSWWIISAITTATPYFIFFH*FICKARGYGSQV 118
A+ CSWW +SA ATP FIF +*FI +A + QV
Sbjct: 401 ASYCSWWDVSAAGPATPDFIFLN*FILEACDFNVQV 508
Score = 44.6 bits (91), Expect(2) = 9e-012
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3 / +3
Query: 3 VSEQIVAXXXXXXXXXXXXHISYFSIDSYAKLVVMVLKY 119
VSEQ++A ISYFSIDSY+KLV ++ KY
Sbjct: 393 VSEQVIAPGGMSQQPAQQLQISYFSIDSYSKLVTLMFKY 509
Score = 43.2 bits (88), Expect(2) = 9e-012
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +2 / +2
Query: 119 LFSGDNTK*RQYTFQDYFCYCEDHSERC*GKESFI*SPTILPIVYKLA 262
++ G TK RQ + +D DHSERC* KESF S I I+YK A
Sbjct: 506 VWRGFRTKQRQPSSEDSLHNH*DHSERC*RKESFFQSSAIF*IIYKFA 649
Score = 37.3 bits (75), Expect(2) = 3e-014
Identities = 18/32 (56%), Positives = 21/32 (65%)
Frame = -1 / -3
Query: 99 RALHMNQWKNMKYGVAVVIAEMIHQEQQFARR 4
+A MNQ +NMK GVA AE HQEQ A+R
Sbjct: 489 QASSMNQLRNMKSGVAGPAAETSHQEQ*LAQR 394
Score = 37.3 bits (75), Expect(2) = 6e-016
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / -2
Query: 118 YLRTITTSFAYESMEKYEIW 59
YL TSF YES+EKYEIW
Sbjct: 508 YLNIKVTSFEYESIEKYEIW 449
Score = 36.8 bits (74), Expect(2) = 0.006
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +1 / +1
Query: 4 SPSKLLLLVDHLSNHHSNPIFHIFPLIHMQS 96
S SKLLLLV LS+ SN FHI LIH +S
Sbjct: 394 SLSKLLLLVGCLSSRPSNSRFHISQLIHTRS 486
Score = 34.1 bits (68), Expect(2) = 0.008
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = -1 / -3
Query: 273 *GHRANLXTIGSMVGD*MKLSFPQHLSE 190
* H ANL I +M D* KLSF QHLSE
Sbjct: 660 *AHLANL*II*NMAED*KKLSFLQHLSE 577
Score = 23.1 bits (44), Expect(2) = 0.008
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = -2 / -1
Query: 119 VLENHNHELCI*INGKI*NM 60
+LE+ +H+L +*IN +I*N+
Sbjct: 509 ILEH*SHKLRV*IN*EI*NL 450
Score = 20.8 bits (39), Expect(2) = 0.006
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +1 / +1
Query: 196 KMLRKRKLHLIPDHTSDCX*I 258
KML+KRK I H D *I
Sbjct: 583 KMLKKRKFLSILGHILDYL*I 645
>gb|AJ615744.1|AJ615744 AJ615744 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 12107R, mRNA
sequence
Length = 258
Score = 71.6 bits (150), Expect(3) = 2e-020
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSKIISVTVR 185
HISYF IDSY+KLV +V+K SVEI PNKGS+L KI+SVT+R
Sbjct: 89 HISYFPIDSYSKLVSVVIKNCSVEIGPNKGSLLPKILSVTIR 214
Score = 54.2 bits (112), Expect(2) = 1e-009
Identities = 25/41 (60%), Positives = 29/41 (70%)
Frame = -3 / -1
Query: 184 LTVTEIILESILPLFGVISTEEYLRTITTSFAYESMEKYEI 62
L VT+ IL LPLFG ISTE++ T TSF YESM KY+I
Sbjct: 213 LIVTDNILGRRLPLFGPISTEQFFITTDTSFEYESMGKYDI 91
Score = 52.8 bits (109), Expect = 1e-006
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = -2 / -3
Query: 218 SFLFLSIFLNGPHSNRNNLGKYTAFIWCYLH*RVLENHNHELCI*INGKI*NM 60
+F + F P+ + LGK AFIW Y H* +L +H H+L I*ING+I* M
Sbjct: 247 AFFSSASF*MDPNCH*QYLGKKAAFIWSYFH*TILYHHRHKLRI*INGEI*YM 89
Score = 44.1 bits (90), Expect(3) = 5e-010
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1 / +3
Query: 52 SNPIFHIFPLIHMQSSWLWFSSTLQWR*HQIKAVY 156
S+ I+HI PLIH++S LW +QW+* QIKA +
Sbjct: 81 SHHIYHISPLIHIRSLCLW**RIVQWK*DQIKAAF 185
Score = 41.8 bits (85), Expect(2) = 1e-005
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -1 / -2
Query: 150 CLYLVLSPLKST*EP*PRALHMNQWKNMKY 61
CLYLVL PL ++ P +A +MNQW NM Y
Sbjct: 179 CLYLVLFPLNNSLSPQTQASNMNQWGNMIY 90
Score = 40.9 bits (83), Expect = 0.005
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = +2 / +1
Query: 44 ITTATPYFIFFH*FICKARGYGSQVLFSGDNTK*RQYTFQD 166
++ Y IF H*FI +A G + LFSG+ TK*RQ + QD
Sbjct: 73 VSAVITYIIFPH*FIFEACVCGDKELFSGNRTK*RQPSSQD 195
Score = 33.6 bits (67), Expect(3) = 2e-020
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITT 52
SL AN CSWWI+SA+ T
Sbjct: 40 SL*AN*CSWWIVSAVIT 90
Score = 29.0 bits (57), Expect(3) = 5e-010
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHH 51
*S SKL+LLVD LS+HH
Sbjct: 39 *SLSKLMLLVDCLSSHH 89
Score = 25.4 bits (49), Expect(3) = 2e-020
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 186 TIQKDAEEKKA 218
+IQKDAEEKKA
Sbjct: 216 SIQKDAEEKKA 248
Score = 24.4 bits (47), Expect(2) = 1e-009
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 215 FLFLSIFLNGP 183
FL SIFLNGP
Sbjct: 245 FLLFSIFLNGP 213
Score = 23.5 bits (45), Expect(2) = 1e-005
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -3
Query: 220 EAFFSSASF*M 188
+AFFSSASF*M
Sbjct: 250 KAFFSSASF*M 218
Score = 21.2 bits (40), Expect(3) = 5e-010
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 188 HSERC*GKES 217
HSERC* +ES
Sbjct: 218 HSERC*REES 247
>gb|AL830419.1|AL830419 AL830419 q:343 Triticum aestivum cDNA clone D06_q343_plate_5, mRNA
sequence
Length = 505
Score = 78.0 bits (164), Expect(2) = 3e-018
Identities = 33/42 (78%), Positives = 37/42 (88%)
Frame = +3 / +1
Query: 108 VLKYSSVEITPNKGSILSKIISVTVRTIQKDAEEKKASFNPR 233
V+K SVEI PNKGS+L KI+SVT+R IQKDAEEKKASFNPR
Sbjct: 1 VIKNCSVEIGPNKGSLLPKILSVTIRVIQKDAEEKKASFNPR 126
Score = 62.9 bits (131), Expect(2) = 3e-013
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -3 / -3
Query: 232 RGLNEAFFSSASF*MVLTVTEIILESILPLFGVISTEEY 116
RGLNEAFFSSASF*M L VT+ IL LPLFG ISTE++
Sbjct: 125 RGLNEAFFSSASF*MTLIVTDNILGRRLPLFGPISTEQF 9
Score = 54.7 bits (113), Expect(2) = 2e-009
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = -2 / -2
Query: 230 GIK*SFLFLSIFLNGPHSNRNNLGKYTAFIWCYLH*RVL 114
G+K*SFL SIFLN P+ + LGK AFIW Y H* +L
Sbjct: 123 GVK*SFLLFSIFLNDPNCH*QYLGKKAAFIWSYFH*TIL 7
Score = 45.1 bits (92), Expect = 3e-004
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = +2 / +3
Query: 119 LFSGDNTK*RQYTFQDYFCYCEDHSERC*GKESFI*SP 232
LFSG+ TK*RQ + QD HSERC* +ESFI* P
Sbjct: 12 LFSGNRTK*RQPSSQDIVSDN*GHSERC*REESFI*PP 125
Score = 31.3 bits (62), Expect(2) = 3e-018
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +3 / +1
Query: 261 LYDLTTTDGHHDGSNFQV 314
L DL+ ++ HHDG+NFQV
Sbjct: 157 LNDLSNSELHHDGANFQV 210
Score = 29.5 bits (58), Expect(2) = 3e-013
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1 / -1
Query: 315 KPEN*NHHDGHQ***GHRANL 253
KP N* HHDG Q *GH A L
Sbjct: 211 KPGN*LHHDGVQNY*GHSAQL 149
Score = 25.8 bits (50), Expect(2) = 4.2
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 196 KMLRKRKLHLIP 231
KML++RKLHL P
Sbjct: 89 KMLKRRKLHLTP 124
Score = 24.9 bits (48), Expect(2) = 2e-009
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2 / -2
Query: 314 NLKIRTIMMAISSSKVIEP 258
NL+I +IMM +KVI+P
Sbjct: 210 NLEISSIMMEFRITKVIQP 154
Score = 23.5 bits (45), Expect(2) = 7.6
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 231 GD*MKLSFPQHLSE 190
G *MKLS QHLSE
Sbjct: 124 GG*MKLSSLQHLSE 83
Score = 22.6 bits (43), Expect(2) = 7.6
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 150 CLYLVLSPLKST 115
CLYLVL PL ++
Sbjct: 43 CLYLVLFPLNNS 8
Score = 21.2 bits (40), Expect(2) = 4.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 121 LQWR*HQIKAVY 156
+QW+* QIKA +
Sbjct: 14 VQWK*DQIKAAF 49
>gb|CD903103.1|CD903103 G356.109C12F010919 G356 Triticum aestivum cDNA clone G356109C12,
mRNA sequence
Length = 719
Score = 43.2 bits (88), Expect(3) = 1e-013
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = +3 / +2
Query: 60 HISYFSIDSYAKLVVMVLKYSSVEITPNKGSILSK 164
HISYF IDSY+KLV +V+K SVEI K + +
Sbjct: 584 HISYFPIDSYSKLVSVVIKNCSVEIGQIKAAFFPR 688
Score = 36.8 bits (74), Expect(2) = 7e-004
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / -3
Query: 133 ISTEEYLRTITTSFAYESMEKYEI 62
ISTE++ T TSF YESM KY+I
Sbjct: 657 ISTEQFFITTDTSFEYESMGKYDI 586
Score = 35.0 bits (70), Expect(2) = 8e-005
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1 / +3
Query: 52 SNPIFHIFPLIHMQSSWLWFSSTLQWR* 135
S+ I+HI PLIH++S LW +QW+*
Sbjct: 576 SHHIYHISPLIHIRSLCLW**RIVQWK* 659
Score = 34.5 bits (69), Expect(2) = 0.037
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = -2 / -2
Query: 134 YLH*RVLENHNHELCI*INGKI*NM 60
Y H* +L +H H+L I*ING+I* M
Sbjct: 658 YFH*TILYHHRHKLRI*INGEI*YM 584
Score = 33.6 bits (67), Expect(3) = 1e-013
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +1
Query: 141 NKGSILSKIISVTVRTIQ 194
NKGS+L KI+SVT+R IQ
Sbjct: 664 NKGSLLPKILSVTIRVIQ 717
Score = 33.6 bits (67), Expect(3) = 1e-013
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 2 SLRANCCSWWIISAITT 52
SL AN CSWWI+SA+ T
Sbjct: 535 SL*AN*CSWWIVSAVIT 585
Score = 30.9 bits (61), Expect = 5.1
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / -1
Query: 138 VLSPLKST*EP*PRALHMNQWKNMKY 61
VL PL ++ P +A +MNQW NM Y
Sbjct: 662 VLFPLNNSLSPQTQASNMNQWGNMIY 585
Score = 30.4 bits (60), Expect = 6.9
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2 / +1
Query: 44 ITTATPYFIFFH*FICKARGYGSQVLFSGDNT 139
++ Y IF H*FI +A G + LFSG+ T
Sbjct: 568 VSAVITYIIFPH*FIFEACVCGDKELFSGNRT 663
Score = 29.0 bits (57), Expect(2) = 8e-005
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 1 *SPSKLLLLVDHLSNHH 51
*S SKL+LLVD LS+HH
Sbjct: 534 *SLSKLMLLVDCLSSHH 584
Score = 24.0 bits (46), Expect(2) = 7e-004
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -3 / -1
Query: 196 F*MVLTVTEIILESILPLF 140
F*M L VT+ IL LPLF
Sbjct: 719 F*MTLIVTDNILGRRLPLF 663
Score = 20.3 bits (38), Expect(2) = 0.037
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2 / -3
Query: 194 LNGPHSNRNNLGKYTAFI 141
LN P+ + LGK AFI
Sbjct: 717 LNDPNCH*QYLGKKAAFI 664
>gb|CA625698.1|CA625698 wl1n.pk0133.h12 wl1n Triticum aestivum cDNA clone wl1n.pk0133.h12
5' end, mRNA sequence
Length = 340
Score = 31.8 bits (63), Expect = 2.7
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +3 / -1
Query: 219 SFNPRPYFRLXINWLYDLTTTDGHHDGSNFQV 314
SFNP P FR + LY++T D +N Q+
Sbjct: 310 SFNPEP*FR*SVASLYEMTPIDSKRTSTNRQL 215
>gb|CD491242.1|CD491242 WHE3081_G08_N15ZT CS wheat cold-stressed seedling subtracted cDNA
library Triticum aestivum cDNA clone WHE3081_G08_N15,
mRNA sequence
Length = 700
Score = 30.9 bits (61), Expect = 5.1
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1 / +1
Query: 25 LVDHLSNHHSNPIFHIFPLIHMQSSWLW 108
L HL HH +P+F +F + W W
Sbjct: 271 LTAHLDYHHRHPLFVLFNYSPLTHRWTW 354
>gb|CD909005.1|CD909005 G468.111I09R010929 G468 Triticum aestivum cDNA clone G468111I09,
mRNA sequence
Length = 675
Score = 30.9 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2 / -3
Query: 269 VIEPIYXQSEVWSGIK*SFLFLSIFLNGP 183
++ P + VWSG+K + L ++LNGP
Sbjct: 100 MVVPSVYSALVWSGVKFCLMVLLMYLNGP 14
>gb|CD914977.1|CD914977 G550.124L20R010920 G550 Triticum aestivum cDNA clone G550124L20,
mRNA sequence
Length = 623
Score = 30.9 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2 / -2
Query: 269 VIEPIYXQSEVWSGIK*SFLFLSIFLNGP 183
++ P + VWSG+K + L ++LNGP
Sbjct: 100 MVVPSVYSALVWSGVKFCLMVLLMYLNGP 14
>gb|CD919934.1|CD919934 G608.115D09R011026 G608 Triticum aestivum cDNA clone G608115D09,
mRNA sequence
Length = 763
Score = 30.9 bits (61), Expect = 5.1
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -2 / -2
Query: 269 VIEPIYXQSEVWSGIK*SFLFLSIFLNGP 183
++ P + VWSG+K + L ++LNGP
Sbjct: 123 MVVPSVYSALVWSGVKFCLMVLLMYLNGP 37
>gb|BF429151.1|BF429151 WHE1709_B01_C01ZS Wheat heat stressed spike cDNA library Triticum
aestivum cDNA clone WHE1709_B01_C01, mRNA sequence
Length = 492
Score = 26.7 bits (52), Expect(2) = 7.5
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / +2
Query: 31 DHLSNHHSNPIFHI 72
+H HHS P++H+
Sbjct: 80 EHTKQHHSQPVYHL 121
Score = 19.4 bits (36), Expect(2) = 7.5
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2 / +3
Query: 167 YFCYCEDHSERC 202
+FC CE E C
Sbjct: 309 FFCQCEALMEIC 344
>gb|BJ259119.1|BJ259119 BJ259119 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh15a08 5', mRNA sequence
Length = 597
Score = 26.7 bits (52), Expect(2) = 9.0
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = +1 / +3
Query: 31 DHLSNHHSNPIFHI 72
+H HHS P++H+
Sbjct: 63 EHTKQHHSQPVYHL 104
Score = 19.4 bits (36), Expect(2) = 9.0
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = +2 / +1
Query: 167 YFCYCEDHSERC 202
+FC CE E C
Sbjct: 553 FFCQCEALMEIC 588
Database: Triticum_nucl_with_EST.fasta
Posted date: May 2, 2006 3:43 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 230,264,357
Number of Sequences: 636343
Number of extensions: 2385759
Number of successful extensions: 159809
Number of sequences better than 10.0: 28
length of database: 122,413,413
effective HSP length: 50
effective length of database: 90,596,263
effective search space used: 4892198202
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)