TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3089980.2.1
(540 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK205649.1|CK205649 FGAS017169 Triticum aestivum FGAS: L... 147 1e-034
gb|BJ264026.1|BJ264026 BJ264026 Y. Ogihara unpublished cDNA... 144 7e-034
gb|CD899691.1|CD899691 G174.113E02R011120 G174 Triticum aes... 144 7e-034
gb|CK171275.1|CK171275 FGAS046460 Triticum aestivum FGAS: T... 144 7e-034
gb|CK171372.1|CK171372 FGAS046603 Triticum aestivum FGAS: T... 144 7e-034
gb|CK162566.1|CK162566 FGAS015162 Triticum aestivum FGAS: L... 118 2e-032
gb|CK212621.1|CK212621 FGAS024502 Triticum aestivum FGAS: L... 118 2e-032
gb|CV778833.1|CV778833 FGAS073242 Triticum aestivum FGAS: L... 118 2e-032
gb|BJ263336.1|BJ263336 BJ263336 Y. Ogihara unpublished cDNA... 118 2e-032
gb|CK215339.1|CK215339 FGAS027297 Triticum aestivum FGAS: L... 137 1e-031
gb|CK207986.1|CK207986 FGAS019661 Triticum aestivum FGAS: L... 129 2e-029
gb|DR736449.1|DR736449 FGAS081819 Triticum aestivum FGAS: L... 129 2e-029
gb|BJ294738.1|BJ294738 BJ294738 Y. Ogihara unpublished cDNA... 107 2e-029
gb|CA704491.1|CA704491 wdk1c.pk012.h13 wdk1c Triticum aesti... 100 7e-028
gb|CD867137.1|CD867137 AZO2.105H04R010328 AZO2 Triticum aes... 99 9e-027
gb|CV766690.1|CV766690 FGAS061077 Triticum aestivum FGAS: L... 118 4e-026
gb|BJ288595.1|BJ288595 BJ288595 Y. Ogihara unpublished cDNA... 118 5e-026
gb|CK161664.1|CK161664 FGAS014235 Triticum aestivum FGAS: L... 113 1e-024
gb|DR739286.1|DR739286 FGAS084503 Triticum aestivum FGAS: L... 113 2e-024
gb|BE405328.1|BE405328 WHE1213_A10_A19ZS Wheat etiolated se... 83 4e-023
gb|BQ483438.1|BQ483438 WHE3508_F03_L06ZS Wheat unstressed r... 105 3e-022
gb|BE444258.1|BE444258 WHE1117_A10_A19ZS Wheat etiolated se... 102 3e-021
gb|BJ251953.1|BJ251953 BJ251953 Y. Ogihara unpublished cDNA... 102 3e-021
gb|BJ261414.1|BJ261414 BJ261414 Y. Ogihara unpublished cDNA... 102 3e-021
gb|CD878901.1|CD878901 AZO4.103N22R011122 AZO4 Triticum aes... 80 3e-021
>gb|CK205649.1|CK205649 FGAS017169 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1104
Score = 147 bits (315), Expect = 1e-034
Identities = 59/128 (46%), Positives = 86/128 (67%)
Frame = -2 / -1
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ A TV A DDPRA +K LY++PPANT S LV LWE KTG+
Sbjct: 663 ILGDGETKVVFVDEADIGAYTVLAADDPRAENKVLYIKPPANTLSHNELVSLWEKKTGKT 484
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPDVNY 171
+ Y+P++ ++ +I+++P+P+N ++ HA+ + G A + GVEA+ELYPDV Y
Sbjct: 483 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKY 304
Query: 170 VTVHDYLD 147
TV D L+
Sbjct: 303 TTVDDLLN 280
>gb|BJ264026.1|BJ264026 BJ264026 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh7j02 3', mRNA sequence
Length = 689
Score = 144 bits (309), Expect = 7e-034
Identities = 58/130 (44%), Positives = 85/130 (65%)
Frame = -2 / -1
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ TV A DDPRA +K LY++PPANT S L LWE KTG+
Sbjct: 551 ILGDGETKVVFVDEADIGTYTVLAADDPRAENKVLYIKPPANTLSHNELASLWEKKTGKT 372
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPDVNY 171
+ Y+P++ ++ +I+++P+P+N ++ HA+ + G A + GVEA+ELYPDV Y
Sbjct: 371 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKY 192
Query: 170 VTVHDYLDGL 141
TV D L+ L
Sbjct: 191 TTVDDLLNRL 162
>gb|CD899691.1|CD899691 G174.113E02R011120 G174 Triticum aestivum cDNA clone G174113E02,
mRNA sequence
Length = 675
Score = 144 bits (309), Expect = 7e-034
Identities = 58/130 (44%), Positives = 85/130 (65%)
Frame = -2 / -3
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ TV A DDPRA +K LY++PPANT S L LWE KTG+
Sbjct: 577 ILGDGETKVVFVDEADIGTYTVLAADDPRAENKVLYIKPPANTLSHNELASLWEKKTGKT 398
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPDVNY 171
+ Y+P++ ++ +I+++P+P+N ++ HA+ + G A + GVEA+ELYPDV Y
Sbjct: 397 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKY 218
Query: 170 VTVHDYLDGL 141
TV D L+ L
Sbjct: 217 TTVDDLLNRL 188
>gb|CK171275.1|CK171275 FGAS046460 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1095
Score = 144 bits (309), Expect = 7e-034
Identities = 58/130 (44%), Positives = 85/130 (65%)
Frame = -2 / -2
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ TV A DDPRA +K LY++PPANT S L LWE KTG+
Sbjct: 656 ILGDGETKVVFVDEADIGTYTVLAADDPRAENKVLYIKPPANTLSHNELASLWEKKTGKT 477
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPDVNY 171
+ Y+P++ ++ +I+++P+P+N ++ HA+ + G A + GVEA+ELYPDV Y
Sbjct: 476 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKY 297
Query: 170 VTVHDYLDGL 141
TV D L+ L
Sbjct: 296 TTVDDLLNRL 267
>gb|CK171372.1|CK171372 FGAS046603 Triticum aestivum FGAS: TaLt6 Triticum aestivum cDNA,
mRNA sequence
Length = 1165
Score = 144 bits (309), Expect = 7e-034
Identities = 58/130 (44%), Positives = 85/130 (65%)
Frame = -2 / -1
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ TV A DDPRA +K LY++PPANT S L LWE KTG+
Sbjct: 652 ILGDGETKVVFVDEADIGTYTVLAADDPRAENKVLYIKPPANTLSHNELASLWEKKTGKT 473
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPDVNY 171
+ Y+P++ ++ +I+++P+P+N ++ HA+ + G A + GVEA+ELYPDV Y
Sbjct: 472 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKY 293
Query: 170 VTVHDYLDGL 141
TV D L+ L
Sbjct: 292 TTVDDLLNRL 263
>gb|CK162566.1|CK162566 FGAS015162 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1047
Score = 118 bits (252), Expect(2) = 2e-032
Identities = 46/99 (46%), Positives = 66/99 (66%)
Frame = -2 / +2
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ + GD + IF E D+ T++AVDDPR L+K LYLRPP+NT S LV LWE K
Sbjct: 323 KVLIMGDGNVKGIFAAEEDVGTYTIKAVDDPRTLNKILYLRPPSNTLSHNELVSLWEKKL 502
Query: 359 GRALDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAG 243
G+ L++ Y+P++EL+ +IR+S PLN LA+ H+ + G
Sbjct: 503 GKTLERVYLPEDELLKKIRESSAPLNVALAISHSVWLKG 619
Score = 41.4 bits (84), Expect(2) = 2e-032
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -2 / +2
Query: 209 GVEATELYPDVNYVTVHDYLD 147
GVEAT+LYPDV Y+TV +YL+
Sbjct: 653 GVEATQLYPDVPYITVDEYLN 715
>gb|CK212621.1|CK212621 FGAS024502 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1034
Score = 118 bits (252), Expect(2) = 2e-032
Identities = 46/99 (46%), Positives = 66/99 (66%)
Frame = -2 / -3
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ + GD + IF E D+ T++AVDDPR L+K LYLRPP+NT S LV LWE K
Sbjct: 693 KVLIMGDGNVKGIFAAEEDVGTYTIKAVDDPRTLNKILYLRPPSNTLSHNELVSLWEKKL 514
Query: 359 GRALDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAG 243
G+ L++ Y+P++EL+ +IR+S PLN LA+ H+ + G
Sbjct: 513 GKTLERVYLPEDELLKKIRESSAPLNVALAISHSVWLKG 397
Score = 41.4 bits (84), Expect(2) = 2e-032
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 209 GVEATELYPDVNYVTVHDYLD 147
GVEAT+LYPDV Y+TV +YL+
Sbjct: 363 GVEATQLYPDVPYITVDEYLN 301
>gb|CV778833.1|CV778833 FGAS073242 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 826
Score = 118 bits (252), Expect(2) = 2e-032
Identities = 46/99 (46%), Positives = 66/99 (66%)
Frame = -2 / +1
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ + GD + IF E D+ T++AVDDPR L+K LYLRPP+NT S LV LWE K
Sbjct: 214 KVLIMGDGNVKGIFAAEEDVGTYTIKAVDDPRTLNKILYLRPPSNTLSHNELVSLWEKKL 393
Query: 359 GRALDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAG 243
G+ L++ Y+P++EL+ +IR+S PLN LA+ H+ + G
Sbjct: 394 GKTLERVYLPEDELLKKIRESSAPLNVALAISHSVWLKG 510
Score = 41.4 bits (84), Expect(2) = 2e-032
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -2 / +1
Query: 209 GVEATELYPDVNYVTVHDYLD 147
GVEAT+LYPDV Y+TV +YL+
Sbjct: 544 GVEATQLYPDVPYITVDEYLN 606
>gb|BJ263336.1|BJ263336 BJ263336 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh13p21 3', mRNA sequence
Length = 813
Score = 118 bits (252), Expect(2) = 2e-032
Identities = 46/99 (46%), Positives = 66/99 (66%)
Frame = -2 / -3
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ + GD + IF E D+ T++AVDDPR L+K LYLRPP+NT S LV LWE K
Sbjct: 649 KVLIMGDGNVKGIFAAEEDVGTYTIKAVDDPRTLNKILYLRPPSNTLSHNELVSLWEKKL 470
Query: 359 GRALDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAG 243
G+ L++ Y+P++EL+ +IR+S PLN LA+ H+ + G
Sbjct: 469 GKTLERVYLPEDELLKKIRESSAPLNVALAISHSVWLKG 353
Score = 41.4 bits (84), Expect(2) = 2e-032
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 209 GVEATELYPDVNYVTVHDYLD 147
GVEAT+LYPDV Y+TV +YL+
Sbjct: 319 GVEATQLYPDVPYITVDEYLN 257
>gb|CK215339.1|CK215339 FGAS027297 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1112
Score = 137 bits (293), Expect = 1e-031
Identities = 55/130 (42%), Positives = 82/130 (63%)
Frame = -2 / -3
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ TV A DDPRA +K LY++PPANT S L LWE KTG+
Sbjct: 615 ILGDGETKVVFVDEADIGTYTVLAADDPRAENKVLYIKPPANTLSHNELASLWEKKTGKT 436
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPDVNY 171
+ Y+P++ ++ +I+++P+P+N ++ HA+ + G A + + TELYPDV Y
Sbjct: 435 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKGDQTNIEIAPSFAPQPTELYPDVKY 256
Query: 170 VTVHDYLDGL 141
TV D L+ L
Sbjct: 255 TTVDDLLNRL 226
>gb|CK207986.1|CK207986 FGAS019661 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 129 bits (277), Expect = 2e-029
Identities = 52/117 (44%), Positives = 76/117 (64%)
Frame = -2 / +2
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ A TV A DDPRA +K LY++P NT S LV LWE KTG+
Sbjct: 587 ILGDGETKVVFVDEADIGAYTVLAADDPRAENKVLYIKPXXNTLSHNELVSLWEKKTGKT 766
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPD 180
+ Y+P++ ++ +I+++P+P+N ++ HA + G D + GVEATELYPD
Sbjct: 767 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHALYIKGDQDNIQIPPSFGVEATELYPD 937
>gb|DR736449.1|DR736449 FGAS081819 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1059
Score = 129 bits (277), Expect = 2e-029
Identities = 52/115 (45%), Positives = 77/115 (66%)
Frame = -2 / +1
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T +FV EAD+ A TV A DDPRA +K LY++PPANT S LV LWE KTG+
Sbjct: 589 ILGDGETNVVFVDEADIGAYTVLAADDPRAENKVLYIKPPANTLSHNELVSLWEKKTGKT 768
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELY 186
+ Y+P++ ++ +I+++P+P+N ++ HA+ + G D A + GVEA+ELY
Sbjct: 769 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYINGGQDHIEIAPSFGVEASELY 933
>gb|BJ294738.1|BJ294738 BJ294738 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl15g11 3', mRNA sequence
Length = 606
Score = 107 bits (229), Expect(2) = 2e-029
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = -2 / -2
Query: 491 EADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRALDKYYMPDEELVN 312
E D+ T++AVDDPR L+K LYLRPP+NT S LV LWE K G+ L++ Y+P++EL+
Sbjct: 605 EEDVGTYTIKAVDDPRTLNKILYLRPPSNTLSHNELVSLWEKKLGKTLERVYLPEDELLK 426
Query: 311 RIRDSPLPLNFQLAMVHATVVAG 243
+IR+S PLN LA+ H+ + G
Sbjct: 425 KIRESSAPLNVALAISHSVWLKG 357
Score = 41.4 bits (84), Expect(2) = 2e-029
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 209 GVEATELYPDVNYVTVHDYLD 147
GVEAT+LYPDV Y+TV +YL+
Sbjct: 323 GVEATQLYPDVPYITVDEYLN 261
>gb|CA704491.1|CA704491 wdk1c.pk012.h13 wdk1c Triticum aestivum cDNA clone wdk1c.pk012.h13
5' end, mRNA sequence
Length = 462
Score = 100 bits (212), Expect(2) = 7e-028
Identities = 39/76 (51%), Positives = 56/76 (73%)
Frame = -2 / +1
Query: 470 TVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRALDKYYMPDEELVNRIRDSPL 291
T++AVDDPR L+K LYLRP +NT S LV LWE K G+ L++ Y+P++EL+N+I++S
Sbjct: 10 TIKAVDDPRTLNKILYLRPRSNTLSHNELVSLWEKKLGKTLERVYLPEDELLNKIQESSA 189
Query: 290 PLNFQLAMVHATVVAG 243
PLN LA+ H+ + G
Sbjct: 190 PLNVALAISHSVWLKG 237
Score = 44.1 bits (90), Expect(2) = 7e-028
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -2 / +1
Query: 209 GVEATELYPDVNYVTVHDYLD 147
GVEATELYPDV+Y+TV +YL+
Sbjct: 271 GVEATELYPDVHYITVDEYLN 333
>gb|CD867137.1|CD867137 AZO2.105H04R010328 AZO2 Triticum aestivum cDNA clone AZO2105H04,
mRNA sequence
Length = 696
Score = 99.1 bits (210), Expect(2) = 9e-027
Identities = 36/79 (45%), Positives = 55/79 (69%)
Frame = -2 / -2
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ + GD + +F E D+ T++AVDDPR+L+K LYLRPP+NT S LV LWE K
Sbjct: 659 KVLIMGDGNVKGVFTAEEDVGTYTIKAVDDPRSLNKILYLRPPSNTLSHNELVSLWEKKL 480
Query: 359 GRALDKYYMPDEELVNRIR 303
G+ L++ Y+P++EL+ +I+
Sbjct: 479 GKTLERVYLPEDELLKKIQ 423
Score = 41.4 bits (84), Expect(2) = 9e-027
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 209 GVEATELYPDVNYVTVHDYLD 147
GVEAT+LYPDV Y+TV +YL+
Sbjct: 331 GVEATQLYPDVPYITVDEYLN 269
>gb|CV766690.1|CV766690 FGAS061077 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 830
Score = 118 bits (253), Expect = 4e-026
Identities = 47/105 (44%), Positives = 70/105 (66%)
Frame = -2 / +2
Query: 461 AVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRALDKYYMPDEELVNRIRDSPLPLN 282
A DDPRA +K LY++PPANT S L LWE KTG+ + Y+P++ ++ +I+++P+P+N
Sbjct: 113 AADDPRAENKVLYIKPPANTLSHNELASLWEKKTGKTFQRVYVPEDAVLKQIQEAPIPMN 292
Query: 281 FQLAMVHATVVAGVCDQTVDAEAGGVEATELYPDVNYVTVHDYLD 147
++ HA+ + G A + GVEA+ELYPDV Y TV D L+
Sbjct: 293 IIFSIGHASYIKGDQTNIEIAPSFGVEASELYPDVKYTTVDDLLN 427
>gb|BJ288595.1|BJ288595 BJ288595 Y. Ogihara unpublished cDNA library, Wh_SL Triticum
aestivum cDNA clone whsl15g11 5', mRNA sequence
Length = 693
Score = 118 bits (252), Expect = 5e-026
Identities = 46/99 (46%), Positives = 66/99 (66%)
Frame = -2 / +3
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ + GD + IF E D+ T++AVDDPR L+K LYLRPP+NT S LV LWE K
Sbjct: 390 KVLIMGDGNVKGIFAAEEDVGTYTIKAVDDPRTLNKILYLRPPSNTLSHNELVSLWEKKL 569
Query: 359 GRALDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAG 243
G+ L++ Y+P++EL+ +IR+S PLN LA+ H+ + G
Sbjct: 570 GKTLERVYLPEDELLKKIRESSAPLNVALAISHSVWLKG 686
>gb|CK161664.1|CK161664 FGAS014235 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1125
Score = 113 bits (242), Expect = 1e-024
Identities = 43/96 (44%), Positives = 65/96 (67%)
Frame = -2 / +3
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ A TV A DDPRA +K LY++PPANT S LV LWE KTG+
Sbjct: 591 ILGDGETKVVFVDEADIGAYTVLAADDPRAENKVLYIKPPANTLSHNELVSLWEKKTGQT 770
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAG 243
+ Y+P++ + +I ++P+P+N ++ HA+ + G
Sbjct: 771 FQRVYVPEDAVPQQIPEAPIPMNIIFSIGHASYIRG 878
>gb|DR739286.1|DR739286 FGAS084503 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 1129
Score = 113 bits (241), Expect = 2e-024
Identities = 41/96 (42%), Positives = 65/96 (67%)
Frame = -2 / +1
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ TV A DDPRA +K LY++PPANT S L LWE KTG+
Sbjct: 628 ILGDGETKVVFVDEADIGTYTVLAADDPRAENKVLYIKPPANTLSHNELASLWEKKTGKT 807
Query: 350 LDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAG 243
+ Y+P++ ++ +I+++P+P+N ++ HA+ + G
Sbjct: 808 FQRVYVPEDAVLKQIQEAPIPMNIIFSIGHASYIKG 915
>gb|BE405328.1|BE405328 WHE1213_A10_A19ZS Wheat etiolated seedling root cDNA library
Triticum aestivum cDNA clone WHE1213_A10_A19, mRNA
sequence
Length = 489
Score = 82.6 bits (174), Expect(2) = 4e-023
Identities = 35/80 (43%), Positives = 49/80 (61%)
Frame = -2 / +3
Query: 482 MAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRALDKYYMPDEELVNRIR 303
+AA TVRA+DD R L+K LY+RPPAN S L+ LWE K GR +P+ +L+ I+
Sbjct: 3 IAAYTVRAIDDTRTLNKILYMRPPANIVSHTELIALWEKKAGRTFQIARIPEPDLLKLIK 182
Query: 302 DSPLPLNFQLAMVHATVVAG 243
++ PLN L+ + V G
Sbjct: 183 EAAYPLNMMLSHSLSVFVRG 242
Score = 45.5 bits (93), Expect(2) = 4e-023
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -2 / +3
Query: 209 GVEATELYPDVNYVTVHDYLDGLKES 132
GVEATELYPDV Y TV +YLD +S
Sbjct: 276 GVEATELYPDVKYTTVDEYLDPSSDS 353
>gb|BQ483438.1|BQ483438 WHE3508_F03_L06ZS Wheat unstressed root cDNA library Triticum
aestivum cDNA clone WHE3508_F03_L06, mRNA sequence
Length = 599
Score = 105 bits (225), Expect = 3e-022
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = -2 / +2
Query: 530 VFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKTGRA 351
+ GD T+ +FV EAD+ TV A DDPRA +K LY++PPANT S L LWE KTG+
Sbjct: 341 ILGDGETKVVFVDEADIGTYTVLAADDPRAENKVLYIKPPANTLSHNELASLWEKKTGKT 520
Query: 350 LDKYYMPDEELVNRIRDSPLPLN 282
+ Y+P++ ++ +I+++P+P+N
Sbjct: 521 FQRVYVPEDAVLKQIQEAPIPMN 589
>gb|BE444258.1|BE444258 WHE1117_A10_A19ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1117_A10_A19,
mRNA sequence
Length = 549
Score = 102 bits (218), Expect = 3e-021
Identities = 44/130 (33%), Positives = 70/130 (53%)
Frame = -2 / -1
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ V+GD +AIF+ E D+A T++++DDPRAL+KT+YLRP N S L+ WE +
Sbjct: 540 KVNVYGDGNVKAIFMDEDDIATYTIKSIDDPRALNKTIYLRPLENILSQNELIAKWEKLS 361
Query: 359 GRALDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPD 180
G+AL+K +P E + + + L + H G + G E + LYP+
Sbjct: 360 GKALEKIPIPSAEFLASMEGTDLANQVGVGHYHHIFYEGCLTNFAIGDDGEEEGSLLYPE 181
Query: 179 VNYVTVHDYL 150
V Y + +Y+
Sbjct: 180 VQYTRMEEYM 151
>gb|BJ251953.1|BJ251953 BJ251953 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf21d05 3', mRNA sequence
Length = 752
Score = 102 bits (218), Expect = 3e-021
Identities = 44/131 (33%), Positives = 70/131 (53%)
Frame = -2 / -1
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ V+GD +AIF+ E D+A T++ +DDPRAL+KT+YLRP N S L+ WE +
Sbjct: 518 KVNVYGDGNVKAIFMDEDDIATYTIKTIDDPRALNKTVYLRPLENILSQNELIAKWEKLS 339
Query: 359 GRALDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPD 180
G+AL+K +P E + + + L + H G + G E + LYP+
Sbjct: 338 GKALEKIPIPSAEFLASMEGTDLANQVGVGHYHHIFYEGCLTNFAIGDDGEEEGSLLYPE 159
Query: 179 VNYVTVHDYLD 147
V Y + +Y++
Sbjct: 158 VQYTRMEEYME 126
>gb|BJ261414.1|BJ261414 BJ261414 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh2n09 3', mRNA sequence
Length = 659
Score = 102 bits (218), Expect = 3e-021
Identities = 44/131 (33%), Positives = 70/131 (53%)
Frame = -2 / -2
Query: 539 RATVFGDDATRAIFVHEADMAAVTVRAVDDPRALDKTLYLRPPANTCSLAHLVRLWEDKT 360
+ V+GD +AIF+ E D+A T++ +DDPRAL+KT+YLRP N S L+ WE +
Sbjct: 517 KVNVYGDGNVKAIFMDEDDIATYTIKTIDDPRALNKTVYLRPLENILSQNELIAKWEKLS 338
Query: 359 GRALDKYYMPDEELVNRIRDSPLPLNFQLAMVHATVVAGVCDQTVDAEAGGVEATELYPD 180
G+AL+K +P E + + + L + H G + G E + LYP+
Sbjct: 337 GKALEKIPIPSAEFLASMEGTDLANQVGVGHYHHIFYEGCLTNFAIGDDGEEEGSLLYPE 158
Query: 179 VNYVTVHDYLD 147
V Y + +Y++
Sbjct: 157 VQYTRMEEYME 125
>gb|CD878901.1|CD878901 AZO4.103N22R011122 AZO4 Triticum aestivum cDNA clone AZO4103N22,
mRNA sequence
Length = 569
Score = 80.3 bits (169), Expect(2) = 3e-021
Identities = 32/66 (48%), Positives = 46/66 (69%)
Frame = -2 / -3
Query: 440 LDKTLYLRPPANTCSLAHLVRLWEDKTGRALDKYYMPDEELVNRIRDSPLPLNFQLAMVH 261
L+ LYLRPP+NT S LV LWE K G+ L++ Y+P++EL+ +IR+S PLN LA+ H
Sbjct: 564 LNIILYLRPPSNTLSHNELVSLWEKKLGKTLERVYLPEDELLKKIRESSAPLNVALAISH 385
Query: 260 ATVVAG 243
+ + G
Sbjct: 384 SVWLKG 367
Score = 41.4 bits (84), Expect(2) = 3e-021
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 209 GVEATELYPDVNYVTVHDYLD 147
GVEAT+LYPDV Y+TV +YL+
Sbjct: 333 GVEATQLYPDVPYITVDEYLN 271
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 324,436,594
Number of Sequences: 636343
Number of extensions: 5207924
Number of successful extensions: 248105
Number of sequences better than 1.0e-020: 34
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 11344094279
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)