TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2622915.2.1
(584 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE591134.1|BE591134 WHE0867_G04_M07ZS Wheat 20-45 DAP sp... 150 5e-036
gb|BQ238982.1|BQ238982 TaE05038G07R TaE05 Triticum aestivum... 151 7e-036
gb|BQ801748.1|BQ801748 WHE2818_B02_C04ZS Triticum monococcu... 151 7e-036
gb|BQ806258.1|BQ806258 WHE3576_F08_K16ZS Wheat developing g... 151 7e-036
gb|BJ220259.1|BJ220259 BJ220259 Y. Ogihara unpublished cDNA... 151 7e-036
gb|BJ239685.1|BJ239685 BJ239685 Y. Ogihara unpublished cDNA... 151 7e-036
gb|BJ281758.1|BJ281758 BJ281758 Y. Ogihara unpublished cDNA... 151 7e-036
gb|BJ286867.1|BJ286867 BJ286867 Y. Ogihara unpublished cDNA... 151 7e-036
gb|BJ307490.1|BJ307490 BJ307490 Y. Ogihara unpublished cDNA... 151 7e-036
gb|CA599993.1|CA599993 waw1c.pk004.c14 waw1c Triticum aesti... 151 7e-036
gb|CA632588.1|CA632588 wle1n.pk0054.a2 wle1n Triticum aesti... 151 7e-036
gb|CD894189.1|CD894189 G118.125J15R011115 G118 Triticum aes... 151 7e-036
gb|CD935752.1|CD935752 OV.102F17R010426 OV Triticum aestivu... 151 7e-036
gb|CK162844.1|CK162844 FGAS015444 Triticum aestivum FGAS: L... 151 7e-036
gb|CK200660.1|CK200660 FGAS009176 Triticum aestivum FGAS: L... 151 7e-036
gb|CK215715.1|CK215715 FGAS027684 Triticum aestivum FGAS: L... 151 7e-036
gb|AJ612725.1|AJ612725 AJ612725 Triticum turgidum subsp. du... 151 7e-036
gb|CD927467.1|CD927467 GR45.102D12R010608 GR45 Triticum aes... 149 2e-035
gb|CD892170.1|CD892170 G118.120C17R010926 G118 Triticum aes... 148 5e-035
gb|DR740252.1|DR740252 FGAS085180 Triticum aestivum FGAS: L... 145 3e-034
gb|BJ281760.1|BJ281760 BJ281760 Y. Ogihara unpublished cDNA... 144 8e-034
gb|CA642633.1|CA642633 wre1n.pk0057.d11 wre1n Triticum aest... 133 2e-030
gb|DR740251.1|DR740251 FGAS085179 Triticum aestivum FGAS: L... 133 2e-030
gb|CD453499.1|CD453499 WHE0765_C06_F11ZT CS wheat heat-stre... 132 3e-030
gb|CD887739.1|CD887739 G118.106C09R010924 G118 Triticum aes... 129 2e-029
gb|BJ286865.1|BJ286865 BJ286865 Y. Ogihara unpublished cDNA... 127 8e-029
gb|BJ275605.1|BJ275605 BJ275605 Y. Ogihara unpublished cDNA... 125 4e-028
gb|BQ238440.1|BQ238440 TaE05004B01F TaE05 Triticum aestivum... 120 2e-026
gb|BQ236077.1|BQ236077 TaE05038F12F TaE05 Triticum aestivum... 117 1e-025
gb|BE518051.1|BE518051 WHE0806_F12_K24ZS Wheat vernalized c... 109 3e-023
gb|DR732541.1|DR732541 FGAS078461 Triticum aestivum FGAS: T... 108 6e-023
>gb|BE591134.1|BE591134 WHE0867_G04_M07ZS Wheat 20-45 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0867_G04_M07, mRNA sequence
Length = 368
Score = 150 bits (322), Expect(2) = 5e-036
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 152 LWMVLRVLETVEAHRGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 328
Score = 101 bits (216), Expect(2) = 4e-021
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +2 / -3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR* *SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 330 NQSM*TKVEA*FPDLV*STR***SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 151
Score = 20.8 bits (39), Expect(2) = 5e-036
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -3 / +3
Query: 336 SGCSGRTMVIARQR 295
+GC +T IARQ+
Sbjct: 324 TGCLAQTRAIARQK 365
Score = 19.4 bits (36), Expect(2) = 4e-021
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2 / -2
Query: 299 CLAITIVRPEQP 334
CLAI +V +QP
Sbjct: 361 CLAIALVCAKQP 326
>gb|BQ238982.1|BQ238982 TaE05038G07R TaE05 Triticum aestivum cDNA clone TaE05038G07R, mRNA
sequence
Length = 566
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +3
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 195 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 371
Score = 113 bits (242), Expect = 1e-024
Identities = 50/60 (83%), Positives = 52/60 (86%)
Frame = +2 / -2
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD VYSTR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 373 NQSM*TKVEA*FPDLVYSTR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 194
>gb|BQ801748.1|BQ801748 WHE2818_B02_C04ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2818_B02_C04, mRNA
sequence
Length = 729
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 416 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 592
Score = 101 bits (216), Expect = 5e-021
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +2 / -1
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR* *SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 594 NQSM*TKVEA*FPDLV*STR***SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 415
>gb|BQ806258.1|BQ806258 WHE3576_F08_K16ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3576_F08_K16, mRNA sequence
Length = 593
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 59 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 235
Score = 108 bits (231), Expect(2) = 2e-023
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +2 / -3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 237 NQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 58
Score = 21.7 bits (41), Expect(2) = 2e-023
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 299 CLAITIVRPEQP 334
CLAIT++ +QP
Sbjct: 268 CLAITLIGAKQP 233
>gb|BJ220259.1|BJ220259 BJ220259 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh19c06 3', mRNA sequence
Length = 742
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / -1
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 541 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 365
Score = 108 bits (231), Expect(2) = 3e-023
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +2 / +3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 363 NQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 542
Score = 21.7 bits (41), Expect(2) = 3e-023
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 299 CLAITIVRPEQP 334
CLAIT++ +QP
Sbjct: 332 CLAITLIGAKQP 367
>gb|BJ239685.1|BJ239685 BJ239685 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe7f22 3', mRNA sequence
Length = 730
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / -2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 528 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 352
Score = 101 bits (216), Expect = 5e-021
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +2 / +2
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR* *SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 350 NQSM*TKVEA*FPDLV*STR***SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 529
>gb|BJ281758.1|BJ281758 BJ281758 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j19 5', mRNA sequence
Length = 584
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 29 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 205
Score = 101 bits (216), Expect = 5e-021
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +2 / -3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR* *SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 207 NQSM*TKVEA*FPDLV*STR***SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 28
>gb|BJ286867.1|BJ286867 BJ286867 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j21 3', mRNA sequence
Length = 551
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / -3
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 534 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 358
Score = 101 bits (216), Expect = 5e-021
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +2 / +2
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR* *SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 356 NQSM*TKVEA*FPDLV*STR***SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 535
>gb|BJ307490.1|BJ307490 BJ307490 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11k21 3', mRNA sequence
Length = 676
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / -3
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 455 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 279
Score = 108 bits (231), Expect(2) = 3e-023
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +2 / +1
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 277 NQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 456
Score = 21.7 bits (41), Expect(2) = 3e-023
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 299 CLAITIVRPEQP 334
CLAIT++ +QP
Sbjct: 246 CLAITLIGAKQP 281
>gb|CA599993.1|CA599993 waw1c.pk004.c14 waw1c Triticum aestivum cDNA clone waw1c.pk004.c14
5' end, mRNA sequence
Length = 649
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +1
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 181 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 357
Score = 101 bits (216), Expect = 5e-021
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +2 / -3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR* *SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 359 NQSM*TKVEA*FPDLV*STR***SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 180
>gb|CA632588.1|CA632588 wle1n.pk0054.a2 wle1n Triticum aestivum cDNA clone wle1n.pk0054.a2
5' end, mRNA sequence
Length = 623
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 74 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 250
Score = 113 bits (242), Expect = 1e-024
Identities = 50/60 (83%), Positives = 52/60 (86%)
Frame = +2 / -3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD VYSTR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 252 NQSM*TKVEA*FPDLVYSTR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 73
>gb|CD894189.1|CD894189 G118.125J15R011115 G118 Triticum aestivum cDNA clone G118125J15,
mRNA sequence
Length = 665
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / -1
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 560 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 384
Score = 113 bits (242), Expect = 1e-024
Identities = 50/60 (83%), Positives = 52/60 (86%)
Frame = +2 / +1
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD VYSTR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 382 NQSM*TKVEA*FPDLVYSTR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 561
>gb|CD935752.1|CD935752 OV.102F17R010426 OV Triticum aestivum cDNA clone OV102F17, mRNA
sequence
Length = 653
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / -1
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 503 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 327
Score = 113 bits (242), Expect = 1e-024
Identities = 50/60 (83%), Positives = 52/60 (86%)
Frame = +2 / +1
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD VYSTR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 325 NQSM*TKVEA*FPDLVYSTR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 504
>gb|CK162844.1|CK162844 FGAS015444 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1060
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 620 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 796
Score = 108 bits (231), Expect = 5e-023
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +2 / -2
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 798 NQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 619
>gb|CK200660.1|CK200660 FGAS009176 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 818
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 446 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 622
Score = 101 bits (216), Expect = 5e-021
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +2 / -3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR* *SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 624 NQSM*TKVEA*FPDLV*STR***SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 445
>gb|CK215715.1|CK215715 FGAS027684 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 748
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / -1
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 643 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 467
Score = 108 bits (231), Expect(2) = 3e-023
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +2 / +3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 465 NQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 644
Score = 21.7 bits (41), Expect(2) = 3e-023
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 299 CLAITIVRPEQP 334
CLAIT++ +QP
Sbjct: 434 CLAITLIGAKQP 469
>gb|AJ612725.1|AJ612725 AJ612725 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 07491R, mRNA
sequence
Length = 660
Score = 151 bits (324), Expect = 7e-036
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 200 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 376
Score = 108 bits (231), Expect(2) = 3e-023
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +2 / -1
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 378 NQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 199
Score = 21.7 bits (41), Expect(2) = 3e-023
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 299 CLAITIVRPEQP 334
CLAIT++ +QP
Sbjct: 409 CLAITLIGAKQP 374
>gb|CD927467.1|CD927467 GR45.102D12R010608 GR45 Triticum aestivum cDNA clone GR45102D12,
mRNA sequence
Length = 578
Score = 149 bits (321), Expect = 2e-035
Identities = 55/59 (93%), Positives = 58/59 (98%)
Frame = -3 / -2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWM+LRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 550 LWMLLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 374
Score = 106 bits (227), Expect(2) = 9e-023
Identities = 48/60 (80%), Positives = 51/60 (85%)
Frame = +2 / +3
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL +IHS
Sbjct: 372 NQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKSIHS 551
Score = 21.7 bits (41), Expect(2) = 9e-023
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 299 CLAITIVRPEQP 334
CLAIT++ +QP
Sbjct: 341 CLAITLIGAKQP 376
>gb|CD892170.1|CD892170 G118.120C17R010926 G118 Triticum aestivum cDNA clone G118120C17,
mRNA sequence
Length = 629
Score = 148 bits (318), Expect = 5e-035
Identities = 55/59 (93%), Positives = 57/59 (96%)
Frame = -3 / -1
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSPSNF PLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 539 LWMVLRVLETVEAHSGYHFPWSPSNFRPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 363
Score = 108 bits (231), Expect(2) = 3e-023
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +2 / +1
Query: 404 HQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
+QSM*T VEA*FPD V STR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 361 NQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 540
Score = 21.7 bits (41), Expect(2) = 3e-023
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 299 CLAITIVRPEQP 334
CLAIT++ +QP
Sbjct: 330 CLAITLIGAKQP 365
>gb|DR740252.1|DR740252 FGAS085180 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 145 bits (312), Expect = 3e-034
Identities = 54/59 (91%), Positives = 56/59 (94%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
LWMVLRVL+TVEAH+GY FPWSP NFLPLYGGSDFHDYHHRVLYTKSG YASTFVYMDW
Sbjct: 701 LWMVLRVLETVEAHSGYHFPWSPINFLPLYGGSDFHDYHHRVLYTKSGTYASTFVYMDW 877
>gb|BJ281760.1|BJ281760 BJ281760 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j21 5', mRNA sequence
Length = 570
Score = 144 bits (309), Expect = 8e-034
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = -3 / +3
Query: 576 MVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
MVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 24 MVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 194
>gb|CA642633.1|CA642633 wre1n.pk0057.d11 wre1n Triticum aestivum cDNA clone
wre1n.pk0057.d11 5' end, mRNA sequence
Length = 535
Score = 133 bits (285), Expect = 2e-030
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYAST 424
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYAST
Sbjct: 227 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYAST 385
Score = 104 bits (221), Expect = 1e-021
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = +2 / -2
Query: 425 VEA*FPDFVYSTR*W*SWKSEPPYRGRKFDGLHGKX*PV*ASTVFNTLNTIHS 583
VEA*FPD VYSTR*W*SWKSEPPY GRKFDGL GK P+*ASTV NTL TIHS
Sbjct: 384 VEA*FPDLVYSTR*W*SWKSEPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHS 226
>gb|DR740251.1|DR740251 FGAS085179 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1127
Score = 133 bits (285), Expect = 2e-030
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = -3 / +2
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYAST 424
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYAST
Sbjct: 701 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYAST 859
>gb|CD453499.1|CD453499 WHE0765_C06_F11ZT CS wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0765_C06_F11, mRNA
sequence
Length = 512
Score = 132 bits (283), Expect = 3e-030
Identities = 48/51 (94%), Positives = 50/51 (98%)
Frame = -3 / -3
Query: 558 KTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 510 ETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 358
>gb|CD887739.1|CD887739 G118.106C09R010924 G118 Triticum aestivum cDNA clone G118106C09,
mRNA sequence
Length = 578
Score = 129 bits (277), Expect = 2e-029
Identities = 47/49 (95%), Positives = 48/49 (97%)
Frame = -3 / -3
Query: 552 VEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
VEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 576 VEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 430
>gb|BJ286865.1|BJ286865 BJ286865 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j19 3', mRNA sequence
Length = 472
Score = 127 bits (273), Expect = 8e-029
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = -3 / -3
Query: 549 EAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
EAH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 470 EAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 327
>gb|BJ275605.1|BJ275605 BJ275605 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh8l09 3', mRNA sequence
Length = 513
Score = 125 bits (268), Expect = 4e-028
Identities = 45/47 (95%), Positives = 46/47 (97%)
Frame = -3 / -2
Query: 546 AHTGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
AH+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 512 AHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 372
>gb|BQ238440.1|BQ238440 TaE05004B01F TaE05 Triticum aestivum cDNA clone TaE05004B01F, mRNA
sequence
Length = 523
Score = 120 bits (256), Expect = 2e-026
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -3 / -1
Query: 540 TGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
+GY FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 523 SGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 389
>gb|BQ236077.1|BQ236077 TaE05038F12F TaE05 Triticum aestivum cDNA clone TaE05038F12F, mRNA
sequence
Length = 443
Score = 117 bits (250), Expect = 1e-025
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -3 / -1
Query: 540 TGYXFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
+GY FPWSPSNFLPLYGG DFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 443 SGYHFPWSPSNFLPLYGGFDFHDYHHRVLYTKSGNYASTFVYMDW 309
>gb|BE518051.1|BE518051 WHE0806_F12_K24ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0806_F12_K24, mRNA sequence
Length = 546
Score = 109 bits (232), Expect = 3e-023
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = -3 / +3
Query: 582 LWMVLRVLKTVEAHTGYXFPWSPSNFLPLYGGSDFHDYHHRVL 454
LWMVLRVL+TVEAH+GY FPWSPSNFLPLYGGSDFHDYHHRVL
Sbjct: 417 LWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVL 545
>gb|DR732541.1|DR732541 FGAS078461 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 893
Score = 108 bits (230), Expect = 6e-023
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = -3 / -2
Query: 528 FPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 406
FP SPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW
Sbjct: 703 FPGSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDW 581
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 562,340,060
Number of Sequences: 636343
Number of extensions: 8646456
Number of successful extensions: 111216
Number of sequences better than 1.0e-020: 42
length of database: 122,413,413
effective HSP length: 52
effective length of database: 89,323,577
effective search space used: 12683947934
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)