TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591194.2.1
(591 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX606430.1|CX606430 ANR1_3_A12.b1_A002 Anaerobic roots S... 211 7e-079
gb|BF421494.1|BF421494 FM1_8_D12.g1_A003 Floral-Induced Mer... 211 1e-077
gb|BF586907.1|BF586907 FM1_31_H11.g1_A003 Floral-Induced Me... 211 1e-077
gb|BG103595.1|BG103595 RHIZ2_38_E03.g1_A003 Rhizome2 (RHIZ2... 211 1e-077
gb|BG050704.1|BG050704 FM1_71_H08.g1_A003 Floral-Induced Me... 211 1e-077
gb|CN129609.1|CN129609 RHOH1_36_H07.b3_A002 Acid- and alkal... 207 2e-077
gb|BG465293.1|BG465293 EM1_74_D12.g1_A002 Embryo 1 (EM1) So... 211 7e-076
gb|BG239815.1|BG239815 OV1_29_D04.g1_A002 Ovary 1 (OV1) Sor... 211 2e-073
gb|BF586098.1|BF586098 FM1_26_F08.g1_A003 Floral-Induced Me... 211 2e-071
gb|AW923132.1|AW923132 DG1_49_C08.g1_A002 Dark Grown 1 (DG1... 149 3e-057
gb|BF704964.1|BF704964 FM1_47_D04.g2_A003 Floral-Induced Me... 129 2e-053
gb|BF420927.1|BF420927 FM1_5_A06.g1_A003 Floral-Induced Mer... 161 8e-052
gb|CD220414.1|CD220414 CCC1_67_G07.b1_A007 Callus culture/c... 80 3e-040
gb|CW182759.1|CW182759 104_598_11164251_116_36667_010 Sorgh... 161 6e-039
gb|CW190148.1|CW190148 104_611_11174347_116_36749_070 Sorgh... 161 6e-039
gb|CW216844.1|CW216844 104_649_11195330_116_37124_001 Sorgh... 161 6e-039
gb|CW266285.1|CW266285 104_736_11232344_116_35282_032 Sorgh... 135 5e-031
gb|CW371735.1|CW371735 fsbb001f047f12k0 Sorghum methylation... 135 5e-031
gb|CW473222.1|CW473222 fsbb001f228i05k0 Sorghum methylation... 135 5e-031
gb|CF482627.1|CF482627 POL1_8_D05.b1_A002 Pollen Sorghum bi... 135 5e-031
gb|CF488326.1|CF488326 POL1_49_E06.b1_A002 Pollen Sorghum b... 135 5e-031
gb|CF489854.1|CF489854 POL1_61_B07.b1_A002 Pollen Sorghum b... 135 5e-031
gb|CF486499.1|CF486499 POL1_38_B11.b1_A002 Pollen Sorghum b... 127 2e-028
gb|CX611383.1|CX611383 ANR1_24_G11.b1_A002 Anaerobic roots ... 111 7e-024
gb|BG047687.1|BG047687 OV1_26_F01.b1_A002 Ovary 1 (OV1) Sor... 110 2e-023
gb|CW216845.1|CW216845 104_649_11195330_148_37123_001 Sorgh... 110 2e-023
gb|BG048012.1|BG048012 OV1_26_F01.g1_A002 Ovary 1 (OV1) Sor... 108 9e-023
gb|CW070516.1|CW070516 104_321_10526807_1_30090 Sorghum met... 105 8e-022
gb|CW333518.1|CW333518 104_831_11481987_116_36043_006 Sorgh... 105 8e-022
gb|CW333499.1|CW333499 104_831_11481987_148_36044_006 Sorgh... 104 1e-021
>gb|CX606430.1|CX606430 ANR1_3_A12.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_3_A12_A002 3', mRNA sequence
Length = 623
Score = 211 bits (456), Expect(4) = 7e-079
Identities = 85/87 (97%), Positives = 86/87 (98%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 117 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 296
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PEPK
Sbjct: 297 IPKNALLCGRASGRRTRPL*S*SPEPK 377
Score = 207 bits (446), Expect(4) = 2e-076
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2 / -2
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 400 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 221
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 220 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 119
Score = 150 bits (322), Expect(4) = 6e-054
Identities = 65/87 (74%), Positives = 67/87 (77%)
Frame = -3 / +2
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ A ELVAGREPD
Sbjct: 119 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLASELVAGREPD 298
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 299 PQERTALRPGLWPPDEASLKLKP*TQD 379
Score = 64.3 bits (134), Expect(4) = 2e-076
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +2 / -3
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSLPSTSID 274
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL + S++
Sbjct: 540 CFNYNC*IIYELVDHQRHKTELCSAI*TPQLSLFNKSLE 424
Score = 63.8 bits (133), Expect(5) = 6e-039
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +1 / -2
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A SSAPQNGT FSNLNTPIIS
Sbjct: 541 MF*LQLLNNI*AG*SSAPQNGTLFSNLNTPIIS 443
Score = 62.9 bits (131), Expect(4) = 7e-079
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +1
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 442 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 540
Score = 60.2 bits (125), Expect(5) = 6e-039
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -3
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 225 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 118
Score = 57.9 bits (120), Expect(5) = 2e-027
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3 / -1
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS IISATK NSVQQSEH N+L
Sbjct: 557 NKSTGNVLTTIAK*YMSWLIISATKRNSVQQSEHPNYL 444
Score = 55.6 bits (115), Expect(4) = 6e-054
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / +3
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+ AHILF
Sbjct: 444 EIIGVFRLLNRVPFCGADDQPAHILF 521
Score = 49.6 bits (102), Expect(4) = 7e-079
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -1 / +1
Query: 153 FPVDLLYVKLPRFLAHIIDDDN 88
FPVDLLY KL RFLAHIIDDDN
Sbjct: 541 FPVDLLYGKLSRFLAHIIDDDN 606
Score = 48.3 bits (99), Expect(5) = 1e-024
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / +1
Query: 590 TRGTPLLGTHCRCTLSHGRLS 528
T TPLLGTHCRCTLSHG+LS
Sbjct: 109 TLETPLLGTHCRCTLSHGQLS 171
Score = 46.4 bits (95), Expect(5) = 1e-024
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2 / +1
Query: 386 CSAAGPLDAGPGLSEAESLSPRR 318
CSAAGPL AG GLSEAE+L+PRR
Sbjct: 313 CSAAGPLAAGRGLSEAEALNPRR 381
Score = 43.7 bits (89), Expect(4) = 2e-076
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / -3
Query: 88 IIIINDVSEEARKLHIQQIDRE 153
IIIINDVSEEARKL IQQI RE
Sbjct: 606 IIIINDVSEEARKLPIQQIHRE 541
Score = 43.2 bits (88), Expect(5) = 6e-039
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 377 LGFRASASERPRPAARGPAAEQ 312
Score = 42.3 bits (86), Expect(5) = 2e-027
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 529 DSRP*LRVHLQCVPSNGVPLV 591
DS P*LRVHLQCVPSNGV V
Sbjct: 170 DSCP*LRVHLQCVPSNGVSKV 108
Score = 41.8 bits (85), Expect(5) = 6e-039
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / -2
Query: 99 Q*CERGSEEASHTTNRPGI 155
Q*CERGSE+ASHTTN PG+
Sbjct: 595 Q*CERGSEKASHTTNPPGM 539
Score = 38.6 bits (78), Expect(4) = 6e-054
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 154 IPGRFVVCEASSLPRSHH**** 89
IPG FVV EA SLPRSHH****
Sbjct: 540 IPGGFVVWEAFSLPRSHH**** 605
Score = 37.7 bits (76), Expect(5) = 2e-027
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -1
Query: 101 MM*ARKRGSFTYNKSTGN 154
MM*ARKR SF YNKSTGN
Sbjct: 593 MM*ARKRESFPYNKSTGN 540
Score = 36.8 bits (74), Expect(5) = 1e-024
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = -1 / +2
Query: 273 SIEVEGRDDWSVQIAELXXXXXXXXXXXSYII*QL*LKH 157
S ++ RD+W VQIAE SYII*QL*LKH
Sbjct: 425 SRDLLNRDNWGVQIAEQSSVLWR**STSSYII*QL*LKH 541
Score = 32.7 bits (65), Expect(5) = 2e-027
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 321 SWAQGFSFREAWSGVQ 368
SW QGFSFREA SG Q
Sbjct: 378 SWVQGFSFREASSGGQ 331
Score = 31.8 bits (63), Expect(5) = 1e-024
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +2
Query: 134 M*SFLASSLTSLMMIIFI 81
M SFLASSLTSLMMI+ I
Sbjct: 560 MGSFLASSLTSLMMIMII 613
Score = 29.5 bits (58), Expect(4) = 2e-076
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 442 VQQIPGSSGHPFVA 401
Score = 28.6 bits (56), Expect(4) = 7e-079
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 304 ATKGWPELAGI 272
ATKGWPEL GI
Sbjct: 402 ATKGWPELPGI 434
Score = 25.8 bits (50), Expect(5) = 6e-039
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -3
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN S +VPATPS P + +L
Sbjct: 441 FNKSLEVPATPSLPETNKVL 382
Score = 24.4 bits (47), Expect(5) = 2e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 266 SIDPRKFRPPLR 301
S +P KFRPPLR
Sbjct: 440 STNPWKFRPPLR 405
Score = 24.0 bits (46), Expect(4) = 6e-054
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 300 RRGGRNLRGSIE 265
RRGGRN +G +E
Sbjct: 406 RRGGRNFQGFVE 441
Score = 22.1 bits (42), Expect(5) = 1e-024
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +2
Query: 305 GHEGVAGTCGDQL 267
G+EGVAGT D L
Sbjct: 401 GNEGVAGTSRDLL 439
>gb|BF421494.1|BF421494 FM1_8_D12.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 674
Score = 211 bits (456), Expect(4) = 1e-075
Identities = 85/87 (97%), Positives = 86/87 (98%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 196 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 375
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PEPK
Sbjct: 376 IPKNALLCGRASGRRTRPL*S*SPEPK 456
Score = 207 bits (446), Expect(4) = 1e-077
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2 / -1
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 479 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 300
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 299 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 198
Score = 153 bits (328), Expect(5) = 9e-058
Identities = 66/87 (75%), Positives = 68/87 (78%)
Frame = -3 / +3
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ AGELVAGREPD
Sbjct: 198 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLAGELVAGREPD 377
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 378 PQERTALRPGLWPPDEASLKLKP*TQD 458
Score = 65.7 bits (137), Expect(4) = 1e-077
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +1 / -1
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A+ SSAPQNGT FSNLNTPIIS
Sbjct: 620 MF*LQLLNNI*AD*SSAPQNGTLFSNLNTPIIS 522
Score = 62.9 bits (131), Expect(4) = 1e-075
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +2
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 521 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 619
Score = 62.5 bits (130), Expect(5) = 2e-038
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -2
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSL 256
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL
Sbjct: 619 CFNYNC*IIYELIDHQRHKTELCSAI*TPQLSL 521
Score = 60.2 bits (125), Expect(5) = 2e-038
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -2
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 304 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 197
Score = 60.2 bits (125), Expect(4) = 3e-025
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +3 / -3
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS* IISATK NSVQQSEH N+L
Sbjct: 636 NKSTGNVLTTIAK*YMS*LIISATKRNSVQQSEHPNYL 523
Score = 57.9 bits (120), Expect(5) = 9e-058
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / +1
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+SAHILF
Sbjct: 523 EIIGVFRLLNRVPFCGADDQSAHILF 600
Score = 43.2 bits (88), Expect(5) = 2e-038
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 456 LGFRASASERPRPAARGPAAEQ 391
Score = 42.3 bits (86), Expect(4) = 3e-025
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1 / -3
Query: 529 DSRP*LRVHLQCVPSNGVPLV 591
DS P*LRVHLQCVPSNGV V
Sbjct: 249 DSCP*LRVHLQCVPSNGVSKV 187
Score = 39.6 bits (80), Expect(4) = 1e-077
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / -1
Query: 102 *CERGSEEASHTTNRPGI 155
*CERGSE+ASHTTN PG+
Sbjct: 671 *CERGSEKASHTTNPPGM 618
Score = 38.6 bits (78), Expect(4) = 1e-075
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / +2
Query: 153 FPVDLLYVKLPRFLAHII 100
FPVDLLY KL RFLAHII
Sbjct: 620 FPVDLLYGKLSRFLAHII 673
Score = 37.7 bits (76), Expect(5) = 2e-038
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -3
Query: 101 MM*ARKRGSFTYNKSTGN 154
MM*ARKR SF YNKSTGN
Sbjct: 672 MM*ARKRESFPYNKSTGN 619
Score = 36.8 bits (74), Expect(5) = 9e-058
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 154 IPGRFVVCEASSLPRSHH 101
IPG FVV EA SLPRSHH
Sbjct: 619 IPGGFVVWEAFSLPRSHH 672
Score = 36.3 bits (73), Expect(4) = 1e-077
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / -2
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN SP+VPATPSWP + +L
Sbjct: 520 FNKSPEVPATPSWPETNKVL 461
Score = 36.3 bits (73), Expect(4) = 3e-025
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 100 NDVSEEARKLHIQQIDRE 153
NDVSEEARKL IQQI RE
Sbjct: 673 NDVSEEARKLPIQQIHRE 620
Score = 33.6 bits (67), Expect(4) = 3e-025
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2 / -3
Query: 266 SIDPRKFRPPLRGRTNMVFLGSGIQLQRGLVRRPEAR 376
S +PRKFRPPLRG+ G + RP AR
Sbjct: 519 STNPRKFRPPLRGQKQTRSCRLGFRASASERPRPAAR 409
Score = 29.5 bits (58), Expect(5) = 2e-038
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 521 VQQIPGSSGHPFVA 480
Score = 29.0 bits (57), Expect(5) = 9e-058
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 303 PRRGGRNLRGSIE 265
PRRGGRN RG +E
Sbjct: 482 PRRGGRNFRGFVE 520
Score = 29.0 bits (57), Expect(4) = 1e-075
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +3
Query: 305 GHEGVAGTCGDQL 267
GHEGVAGT GD L
Sbjct: 480 GHEGVAGTSGDLL 518
Score = 22.6 bits (43), Expect(5) = 9e-058
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +3
Query: 186 YII*QL*LKH 157
YII*QL*LKH
Sbjct: 591 YII*QL*LKH 620
>gb|BF586907.1|BF586907 FM1_31_H11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 646
Score = 211 bits (456), Expect(4) = 1e-075
Identities = 85/87 (97%), Positives = 86/87 (98%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 168 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 347
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PEPK
Sbjct: 348 IPKNALLCGRASGRRTRPL*S*SPEPK 428
Score = 207 bits (446), Expect(4) = 1e-077
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2 / -1
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 451 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 272
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 271 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 170
Score = 153 bits (328), Expect(5) = 9e-058
Identities = 66/87 (75%), Positives = 68/87 (78%)
Frame = -3 / +2
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ AGELVAGREPD
Sbjct: 170 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLAGELVAGREPD 349
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 350 PQERTALRPGLWPPDEASLKLKP*TQD 430
Score = 65.7 bits (137), Expect(4) = 1e-077
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +1 / -1
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A+ SSAPQNGT FSNLNTPIIS
Sbjct: 592 MF*LQLLNNI*AD*SSAPQNGTLFSNLNTPIIS 494
Score = 62.9 bits (131), Expect(4) = 1e-075
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +1
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 493 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 591
Score = 62.5 bits (130), Expect(5) = 2e-038
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -2
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSL 256
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL
Sbjct: 591 CFNYNC*IIYELIDHQRHKTELCSAI*TPQLSL 493
Score = 60.2 bits (125), Expect(5) = 2e-038
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -2
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 276 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 169
Score = 60.2 bits (125), Expect(4) = 2e-025
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +3 / -3
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS* IISATK NSVQQSEH N+L
Sbjct: 608 NKSTGNVLTTIAK*YMS*LIISATKRNSVQQSEHPNYL 495
Score = 57.9 bits (120), Expect(5) = 9e-058
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / +3
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+SAHILF
Sbjct: 495 EIIGVFRLLNRVPFCGADDQSAHILF 572
Score = 43.2 bits (88), Expect(5) = 2e-038
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 428 LGFRASASERPRPAARGPAAEQ 363
Score = 42.3 bits (86), Expect(4) = 2e-025
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1 / -3
Query: 529 DSRP*LRVHLQCVPSNGVPLV 591
DS P*LRVHLQCVPSNGV V
Sbjct: 221 DSCP*LRVHLQCVPSNGVSKV 159
Score = 39.6 bits (80), Expect(4) = 1e-077
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / -1
Query: 102 *CERGSEEASHTTNRPGI 155
*CERGSE+ASHTTN PG+
Sbjct: 643 *CERGSEKASHTTNPPGM 590
Score = 38.6 bits (78), Expect(4) = 1e-075
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 153 FPVDLLYVKLPRFLAHII 100
FPVDLLY KL RFLAHII
Sbjct: 592 FPVDLLYGKLSRFLAHII 645
Score = 37.7 bits (76), Expect(5) = 2e-038
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -3
Query: 101 MM*ARKRGSFTYNKSTGN 154
MM*ARKR SF YNKSTGN
Sbjct: 644 MM*ARKRESFPYNKSTGN 591
Score = 36.8 bits (74), Expect(5) = 9e-058
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 154 IPGRFVVCEASSLPRSHH 101
IPG FVV EA SLPRSHH
Sbjct: 591 IPGGFVVWEAFSLPRSHH 644
Score = 36.3 bits (73), Expect(4) = 1e-077
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / -2
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN SP+VPATPSWP + +L
Sbjct: 492 FNKSPEVPATPSWPETNKVL 433
Score = 36.3 bits (73), Expect(4) = 2e-025
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 100 NDVSEEARKLHIQQIDRE 153
NDVSEEARKL IQQI RE
Sbjct: 645 NDVSEEARKLPIQQIHRE 592
Score = 33.6 bits (67), Expect(4) = 2e-025
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2 / -3
Query: 266 SIDPRKFRPPLRGRTNMVFLGSGIQLQRGLVRRPEAR 376
S +PRKFRPPLRG+ G + RP AR
Sbjct: 491 STNPRKFRPPLRGQKQTRSCRLGFRASASERPRPAAR 381
Score = 29.5 bits (58), Expect(5) = 2e-038
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 493 VQQIPGSSGHPFVA 452
Score = 29.0 bits (57), Expect(5) = 9e-058
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 303 PRRGGRNLRGSIE 265
PRRGGRN RG +E
Sbjct: 454 PRRGGRNFRGFVE 492
Score = 29.0 bits (57), Expect(4) = 1e-075
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 305 GHEGVAGTCGDQL 267
GHEGVAGT GD L
Sbjct: 452 GHEGVAGTSGDLL 490
Score = 22.6 bits (43), Expect(5) = 9e-058
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 186 YII*QL*LKH 157
YII*QL*LKH
Sbjct: 563 YII*QL*LKH 592
>gb|BG103595.1|BG103595 RHIZ2_38_E03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 505
Score = 211 bits (456), Expect(4) = 1e-075
Identities = 85/87 (97%), Positives = 86/87 (98%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 27 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 206
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PEPK
Sbjct: 207 IPKNALLCGRASGRRTRPL*S*SPEPK 287
Score = 207 bits (446), Expect(4) = 1e-077
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2 / -1
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 310 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 131
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 130 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 29
Score = 153 bits (328), Expect(5) = 4e-058
Identities = 66/87 (75%), Positives = 68/87 (78%)
Frame = -3 / +2
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ AGELVAGREPD
Sbjct: 29 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLAGELVAGREPD 208
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 209 PQERTALRPGLWPPDEASLKLKP*TQD 289
Score = 65.7 bits (137), Expect(4) = 1e-077
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +1 / -1
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A+ SSAPQNGT FSNLNTPIIS
Sbjct: 451 MF*LQLLNNI*AD*SSAPQNGTLFSNLNTPIIS 353
Score = 62.9 bits (131), Expect(4) = 1e-075
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +1
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 352 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 450
Score = 62.5 bits (130), Expect(5) = 8e-039
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -2
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSL 256
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL
Sbjct: 450 CFNYNC*IIYELIDHQRHKTELCSAI*TPQLSL 352
Score = 60.2 bits (125), Expect(5) = 8e-039
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -2
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 135 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 28
Score = 60.2 bits (125), Expect(4) = 1e-025
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +3 / -3
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS* IISATK NSVQQSEH N+L
Sbjct: 467 NKSTGNVLTTIAK*YMS*LIISATKRNSVQQSEHPNYL 354
Score = 57.9 bits (120), Expect(5) = 4e-058
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / +3
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+SAHILF
Sbjct: 354 EIIGVFRLLNRVPFCGADDQSAHILF 431
Score = 43.2 bits (88), Expect(5) = 8e-039
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 287 LGFRASASERPRPAARGPAAEQ 222
Score = 42.3 bits (86), Expect(4) = 1e-025
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1 / -3
Query: 529 DSRP*LRVHLQCVPSNGVPLV 591
DS P*LRVHLQCVPSNGV V
Sbjct: 80 DSCP*LRVHLQCVPSNGVSKV 18
Score = 39.6 bits (80), Expect(4) = 1e-077
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / -1
Query: 102 *CERGSEEASHTTNRPGI 155
*CERGSE+ASHTTN PG+
Sbjct: 502 *CERGSEKASHTTNPPGM 449
Score = 38.6 bits (78), Expect(4) = 1e-075
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 153 FPVDLLYVKLPRFLAHII 100
FPVDLLY KL RFLAHII
Sbjct: 451 FPVDLLYGKLSRFLAHII 504
Score = 37.7 bits (76), Expect(5) = 8e-039
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -3
Query: 101 MM*ARKRGSFTYNKSTGN 154
MM*ARKR SF YNKSTGN
Sbjct: 503 MM*ARKRESFPYNKSTGN 450
Score = 36.8 bits (74), Expect(5) = 4e-058
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +3
Query: 154 IPGRFVVCEASSLPRSHH 101
IPG FVV EA SLPRSHH
Sbjct: 450 IPGGFVVWEAFSLPRSHH 503
Score = 36.3 bits (73), Expect(4) = 1e-077
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / -2
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN SP+VPATPSWP + +L
Sbjct: 351 FNKSPEVPATPSWPETNKVL 292
Score = 36.3 bits (73), Expect(4) = 1e-025
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 100 NDVSEEARKLHIQQIDRE 153
NDVSEEARKL IQQI RE
Sbjct: 504 NDVSEEARKLPIQQIHRE 451
Score = 33.6 bits (67), Expect(4) = 1e-025
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2 / -3
Query: 266 SIDPRKFRPPLRGRTNMVFLGSGIQLQRGLVRRPEAR 376
S +PRKFRPPLRG+ G + RP AR
Sbjct: 350 STNPRKFRPPLRGQKQTRSCRLGFRASASERPRPAAR 240
Score = 29.5 bits (58), Expect(5) = 8e-039
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 352 VQQIPGSSGHPFVA 311
Score = 29.0 bits (57), Expect(5) = 4e-058
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 303 PRRGGRNLRGSIE 265
PRRGGRN RG +E
Sbjct: 313 PRRGGRNFRGFVE 351
Score = 29.0 bits (57), Expect(4) = 1e-075
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 305 GHEGVAGTCGDQL 267
GHEGVAGT GD L
Sbjct: 311 GHEGVAGTSGDLL 349
Score = 22.6 bits (43), Expect(5) = 4e-058
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 186 YII*QL*LKH 157
YII*QL*LKH
Sbjct: 422 YII*QL*LKH 451
>gb|BG050704.1|BG050704 FM1_71_H08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 501
Score = 211 bits (456), Expect(4) = 3e-075
Identities = 85/87 (97%), Positives = 86/87 (98%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 25 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 204
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PEPK
Sbjct: 205 IPKNALLCGRASGRRTRPL*S*SPEPK 285
Score = 207 bits (446), Expect(4) = 1e-077
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2 / -2
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 308 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 129
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 128 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 27
Score = 153 bits (328), Expect(5) = 3e-058
Identities = 66/87 (75%), Positives = 68/87 (78%)
Frame = -3 / +3
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ AGELVAGREPD
Sbjct: 27 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLAGELVAGREPD 206
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 207 PQERTALRPGLWPPDEASLKLKP*TQD 287
Score = 65.7 bits (137), Expect(4) = 1e-077
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +1 / -2
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A+ SSAPQNGT FSNLNTPIIS
Sbjct: 449 MF*LQLLNNI*AD*SSAPQNGTLFSNLNTPIIS 351
Score = 62.9 bits (131), Expect(4) = 3e-075
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +2
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 350 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 448
Score = 62.5 bits (130), Expect(5) = 8e-039
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -3
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSL 256
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL
Sbjct: 448 CFNYNC*IIYELIDHQRHKTELCSAI*TPQLSL 350
Score = 60.2 bits (125), Expect(5) = 8e-039
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -3
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 133 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 26
Score = 60.2 bits (125), Expect(4) = 7e-025
Identities = 29/38 (76%), Positives = 31/38 (81%)
Frame = +3 / -1
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS* IISATK NSVQQSEH N+L
Sbjct: 465 NKSTGNVLTTIAK*YMS*LIISATKRNSVQQSEHPNYL 352
Score = 57.9 bits (120), Expect(5) = 3e-058
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / +1
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+SAHILF
Sbjct: 352 EIIGVFRLLNRVPFCGADDQSAHILF 429
Score = 43.2 bits (88), Expect(5) = 8e-039
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -1
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 285 LGFRASASERPRPAARGPAAEQ 220
Score = 42.3 bits (86), Expect(4) = 7e-025
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 529 DSRP*LRVHLQCVPSNGVPLV 591
DS P*LRVHLQCVPSNGV V
Sbjct: 78 DSCP*LRVHLQCVPSNGVSKV 16
Score = 39.6 bits (80), Expect(4) = 1e-077
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / -2
Query: 102 *CERGSEEASHTTNRPGI 155
*CERGSE+ASHTTN PG+
Sbjct: 500 *CERGSEKASHTTNPPGM 447
Score = 37.7 bits (76), Expect(5) = 8e-039
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -1
Query: 101 MM*ARKRGSFTYNKSTGN 154
MM*ARKR SF YNKSTGN
Sbjct: 501 MM*ARKRESFPYNKSTGN 448
Score = 36.8 bits (74), Expect(4) = 3e-075
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 154 IPGRFVVCEASSLPRSHH 101
IPG FVV EA SLPRSHH
Sbjct: 448 IPGGFVVWEAFSLPRSHH 501
Score = 36.8 bits (74), Expect(5) = 3e-058
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -1 / +2
Query: 153 FPVDLLYVKLPRFLAHI 103
FPVDLLY KL RFLAHI
Sbjct: 449 FPVDLLYGKLSRFLAHI 499
Score = 36.3 bits (73), Expect(4) = 1e-077
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / -3
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN SP+VPATPSWP + +L
Sbjct: 349 FNKSPEVPATPSWPETNKVL 290
Score = 33.6 bits (67), Expect(4) = 7e-025
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +2 / -1
Query: 266 SIDPRKFRPPLRGRTNMVFLGSGIQLQRGLVRRPEAR 376
S +PRKFRPPLRG+ G + RP AR
Sbjct: 348 STNPRKFRPPLRGQKQTRSCRLGFRASASERPRPAAR 238
Score = 33.6 bits (67), Expect(4) = 7e-025
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / -3
Query: 103 DVSEEARKLHIQQIDRE 153
DVSEEARKL IQQI RE
Sbjct: 499 DVSEEARKLPIQQIHRE 449
Score = 29.5 bits (58), Expect(5) = 8e-039
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 350 VQQIPGSSGHPFVA 309
Score = 29.0 bits (57), Expect(5) = 3e-058
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 303 PRRGGRNLRGSIE 265
PRRGGRN RG +E
Sbjct: 311 PRRGGRNFRGFVE 349
Score = 29.0 bits (57), Expect(4) = 3e-075
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +3
Query: 305 GHEGVAGTCGDQL 267
GHEGVAGT GD L
Sbjct: 309 GHEGVAGTSGDLL 347
Score = 22.6 bits (43), Expect(5) = 3e-058
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +3
Query: 186 YII*QL*LKH 157
YII*QL*LKH
Sbjct: 420 YII*QL*LKH 449
>gb|CN129609.1|CN129609 RHOH1_36_H07.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_36_H07_A002 3', mRNA sequence
Length = 742
Score = 207 bits (446), Expect(4) = 2e-077
Identities = 84/87 (96%), Positives = 85/87 (97%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 241 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 420
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PE K
Sbjct: 421 IPKNALLCGRASGRRTRPL*S*SPELK 501
Score = 204 bits (440), Expect(4) = 1e-075
Identities = 85/94 (90%), Positives = 88/94 (93%)
Frame = +2 / -3
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + L SG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 524 RNKQGLAVLSSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 345
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 344 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 243
Score = 150 bits (322), Expect(4) = 6e-054
Identities = 65/87 (74%), Positives = 67/87 (77%)
Frame = -3 / +3
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ A ELVAGREPD
Sbjct: 243 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLASELVAGREPD 422
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 423 PQERTALRPGLWPPDEASLKLKP*TQD 503
Score = 64.3 bits (134), Expect(4) = 1e-075
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +2 / -1
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSLPSTSID 274
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL + S++
Sbjct: 664 CFNYNC*IIYELVDHQRHKTELCSAI*TPQLSLFNKSLE 548
Score = 63.8 bits (133), Expect(5) = 7e-038
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +1 / -3
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A SSAPQNGT FSNLNTPIIS
Sbjct: 665 MF*LQLLNNI*AG*SSAPQNGTLFSNLNTPIIS 567
Score = 62.9 bits (131), Expect(4) = 2e-077
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +2
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 566 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 664
Score = 60.2 bits (125), Expect(5) = 7e-038
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -1
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 349 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 242
Score = 57.9 bits (120), Expect(5) = 4e-025
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3 / -2
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS IISATK NSVQQSEH N+L
Sbjct: 681 NKSTGNVLTTIAK*YMSWLIISATKRNSVQQSEHPNYL 568
Score = 55.6 bits (115), Expect(4) = 6e-054
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / +1
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+ AHILF
Sbjct: 568 EIIGVFRLLNRVPFCGADDQPAHILF 645
Score = 49.6 bits (102), Expect(4) = 2e-077
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -1 / +2
Query: 153 FPVDLLYVKLPRFLAHIIDDDN 88
FPVDLLY KL RFLAHIIDDDN
Sbjct: 665 FPVDLLYGKLSRFLAHIIDDDN 730
Score = 48.3 bits (99), Expect(5) = 3e-023
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / +2
Query: 590 TRGTPLLGTHCRCTLSHGRLS 528
T TPLLGTHCRCTLSHG+LS
Sbjct: 233 TLETPLLGTHCRCTLSHGQLS 295
Score = 43.7 bits (89), Expect(4) = 1e-075
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / -1
Query: 88 IIIINDVSEEARKLHIQQIDRE 153
IIIINDVSEEARKL IQQI RE
Sbjct: 730 IIIINDVSEEARKLPIQQIHRE 665
Score = 42.8 bits (87), Expect(5) = 3e-023
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -2 / +2
Query: 386 CSAAGPLDAGPGLSEAESLSPRR 318
CSAAGPL AG GLSEAE+L+ RR
Sbjct: 437 CSAAGPLAAGRGLSEAEALNSRR 505
Score = 42.3 bits (86), Expect(5) = 4e-025
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1 / -2
Query: 529 DSRP*LRVHLQCVPSNGVPLV 591
DS P*LRVHLQCVPSNGV V
Sbjct: 294 DSCP*LRVHLQCVPSNGVSKV 232
Score = 41.8 bits (85), Expect(5) = 7e-038
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / -3
Query: 99 Q*CERGSEEASHTTNRPGI 155
Q*CERGSE+ASHTTN PG+
Sbjct: 719 Q*CERGSEKASHTTNPPGM 663
Score = 39.6 bits (80), Expect(5) = 7e-038
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1 / -2
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
L R SASERP PA+RGPAAEQ
Sbjct: 501 LEFRASASERPRPAARGPAAEQ 436
Score = 38.6 bits (78), Expect(4) = 6e-054
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -3 / +1
Query: 154 IPGRFVVCEASSLPRSHH**** 89
IPG FVV EA SLPRSHH****
Sbjct: 664 IPGGFVVWEAFSLPRSHH**** 729
Score = 37.7 bits (76), Expect(5) = 4e-025
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -2
Query: 101 MM*ARKRGSFTYNKSTGN 154
MM*ARKR SF YNKSTGN
Sbjct: 717 MM*ARKRESFPYNKSTGN 664
Score = 36.8 bits (74), Expect(5) = 3e-023
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = -1 / +3
Query: 273 SIEVEGRDDWSVQIAELXXXXXXXXXXXSYII*QL*LKH 157
S ++ RD+W VQIAE SYII*QL*LKH
Sbjct: 549 SRDLLNRDNWGVQIAEQSSVLWR**STSSYII*QL*LKH 665
Score = 31.8 bits (63), Expect(5) = 3e-023
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2 / +3
Query: 134 M*SFLASSLTSLMMIIFI 81
M SFLASSLTSLMMI+ I
Sbjct: 684 MGSFLASSLTSLMMIMII 737
Score = 29.5 bits (58), Expect(4) = 1e-075
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 566 VQQIPGSSGHPFVA 525
Score = 28.6 bits (56), Expect(4) = 2e-077
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 304 ATKGWPELAGI 272
ATKGWPEL GI
Sbjct: 526 ATKGWPELPGI 558
Score = 25.8 bits (50), Expect(5) = 4e-025
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / -1
Query: 330 QGFSFREAWSGVQ 368
QGFSFREA SG Q
Sbjct: 493 QGFSFREASSGGQ 455
Score = 25.8 bits (50), Expect(5) = 7e-038
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN S +VPATPS P + +L
Sbjct: 565 FNKSLEVPATPSLPETNKVL 506
Score = 24.4 bits (47), Expect(5) = 4e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 266 SIDPRKFRPPLR 301
S +P KFRPPLR
Sbjct: 564 STNPWKFRPPLR 529
Score = 24.0 bits (46), Expect(4) = 6e-054
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 300 RRGGRNLRGSIE 265
RRGGRN +G +E
Sbjct: 530 RRGGRNFQGFVE 565
Score = 22.1 bits (42), Expect(5) = 3e-023
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 305 GHEGVAGTCGDQL 267
G+EGVAGT D L
Sbjct: 525 GNEGVAGTSRDLL 563
>gb|BG465293.1|BG465293 EM1_74_D12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 211 bits (456), Expect(4) = 1e-075
Identities = 85/87 (97%), Positives = 86/87 (98%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 130 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 309
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PEPK
Sbjct: 310 IPKNALLCGRASGRRTRPL*S*SPEPK 390
Score = 207 bits (446), Expect(4) = 7e-076
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2 / -1
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 413 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 234
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 233 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 132
Score = 150 bits (322), Expect(4) = 2e-053
Identities = 65/87 (74%), Positives = 67/87 (77%)
Frame = -3 / +3
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ A ELVAGREPD
Sbjct: 132 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLASELVAGREPD 311
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 312 PQERTALRPGLWPPDEASLKLKP*TQD 392
Score = 64.3 bits (134), Expect(4) = 7e-076
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +2 / -2
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSLPSTSID 274
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL + S++
Sbjct: 553 CFNYNC*IIYELVDHQRHKTELCSAI*TPQLSLFNKSLE 437
Score = 63.8 bits (133), Expect(5) = 8e-038
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +1 / -1
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A SSAPQNGT FSNLNTPIIS
Sbjct: 554 MF*LQLLNNI*AG*SSAPQNGTLFSNLNTPIIS 456
Score = 62.9 bits (131), Expect(4) = 1e-075
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +2
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 455 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 553
Score = 60.2 bits (125), Expect(5) = 8e-038
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -2
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 238 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 131
Score = 57.9 bits (120), Expect(5) = 4e-027
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3 / -3
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS IISATK NSVQQSEH N+L
Sbjct: 570 NKSTGNVLTTIAK*YMSWLIISATKRNSVQQSEHPNYL 457
Score = 55.6 bits (115), Expect(4) = 2e-053
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / +1
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+ AHILF
Sbjct: 457 EIIGVFRLLNRVPFCGADDQPAHILF 534
Score = 48.3 bits (99), Expect(5) = 3e-022
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / +2
Query: 590 TRGTPLLGTHCRCTLSHGRLS 528
T TPLLGTHCRCTLSHG+LS
Sbjct: 122 TLETPLLGTHCRCTLSHGQLS 184
Score = 46.4 bits (95), Expect(5) = 3e-022
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2 / +2
Query: 386 CSAAGPLDAGPGLSEAESLSPRR 318
CSAAGPL AG GLSEAE+L+PRR
Sbjct: 326 CSAAGPLAAGRGLSEAEALNPRR 394
Score = 43.2 bits (88), Expect(5) = 8e-038
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 390 LGFRASASERPRPAARGPAAEQ 325
Score = 42.3 bits (86), Expect(5) = 4e-027
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1 / -3
Query: 529 DSRP*LRVHLQCVPSNGVPLV 591
DS P*LRVHLQCVPSNGV V
Sbjct: 183 DSCP*LRVHLQCVPSNGVSKV 121
Score = 41.8 bits (85), Expect(4) = 7e-076
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / -1
Query: 99 Q*CERGSEEASHTTNRPGI 155
Q*CERGSE+ASHTTN PG+
Sbjct: 608 Q*CERGSEKASHTTNPPGM 552
Score = 38.6 bits (78), Expect(4) = 1e-075
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = -1 / +2
Query: 153 FPVDLLYVKLPRFLAHII 100
FPVDLLY KL RFLAHII
Sbjct: 554 FPVDLLYGKLSRFLAHII 607
Score = 37.7 bits (76), Expect(5) = 8e-038
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -3
Query: 101 MM*ARKRGSFTYNKSTGN 154
MM*ARKR SF YNKSTGN
Sbjct: 606 MM*ARKRESFPYNKSTGN 553
Score = 36.8 bits (74), Expect(4) = 2e-053
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 154 IPGRFVVCEASSLPRSHH 101
IPG FVV EA SLPRSHH
Sbjct: 553 IPGGFVVWEAFSLPRSHH 606
Score = 36.8 bits (74), Expect(5) = 3e-022
Identities = 20/39 (51%), Positives = 23/39 (58%)
Frame = -1 / +3
Query: 273 SIEVEGRDDWSVQIAELXXXXXXXXXXXSYII*QL*LKH 157
S ++ RD+W VQIAE SYII*QL*LKH
Sbjct: 438 SRDLLNRDNWGVQIAEQSSVLWR**STSSYII*QL*LKH 554
Score = 36.3 bits (73), Expect(5) = 4e-027
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +1 / -2
Query: 100 NDVSEEARKLHIQQIDRE 153
NDVSEEARKL IQQI RE
Sbjct: 607 NDVSEEARKLPIQQIHRE 554
Score = 32.7 bits (65), Expect(5) = 4e-027
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 321 SWAQGFSFREAWSGVQ 368
SW QGFSFREA SG Q
Sbjct: 391 SWVQGFSFREASSGGQ 344
Score = 29.5 bits (58), Expect(4) = 7e-076
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 455 VQQIPGSSGHPFVA 414
Score = 28.6 bits (56), Expect(4) = 1e-075
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 304 ATKGWPELAGI 272
ATKGWPEL GI
Sbjct: 415 ATKGWPELPGI 447
Score = 25.8 bits (50), Expect(5) = 8e-038
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -2
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN S +VPATPS P + +L
Sbjct: 454 FNKSLEVPATPSLPETNKVL 395
Score = 24.4 bits (47), Expect(5) = 4e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 266 SIDPRKFRPPLR 301
S +P KFRPPLR
Sbjct: 453 STNPWKFRPPLR 418
Score = 24.0 bits (46), Expect(4) = 2e-053
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 300 RRGGRNLRGSIE 265
RRGGRN +G +E
Sbjct: 419 RRGGRNFQGFVE 454
Score = 23.1 bits (44), Expect(5) = 3e-022
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / +3
Query: 134 M*SFLASSLTSL 99
M SFLASSLTSL
Sbjct: 573 MGSFLASSLTSL 608
Score = 22.1 bits (42), Expect(5) = 3e-022
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 305 GHEGVAGTCGDQL 267
G+EGVAGT D L
Sbjct: 414 GNEGVAGTSRDLL 452
>gb|BG239815.1|BG239815 OV1_29_D04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 470
Score = 211 bits (456), Expect(4) = 6e-073
Identities = 85/87 (97%), Positives = 86/87 (98%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 1 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 180
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PEPK
Sbjct: 181 IPKNALLCGRASGRRTRPL*S*SPEPK 261
Score = 207 bits (446), Expect(4) = 2e-073
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2 / -1
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 284 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 105
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 104 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 3
Score = 150 bits (322), Expect(4) = 1e-050
Identities = 65/87 (74%), Positives = 67/87 (77%)
Frame = -3 / +3
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ A ELVAGREPD
Sbjct: 3 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLASELVAGREPD 182
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 183 PQERTALRPGLWPPDEASLKLKP*TQD 263
Score = 64.3 bits (134), Expect(4) = 2e-073
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +2 / -2
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSLPSTSID 274
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL + S++
Sbjct: 424 CFNYNC*IIYELVDHQRHKTELCSAI*TPQLSLFNKSLE 308
Score = 63.8 bits (133), Expect(5) = 2e-036
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +1 / -1
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A SSAPQNGT FSNLNTPIIS
Sbjct: 425 MF*LQLLNNI*AG*SSAPQNGTLFSNLNTPIIS 327
Score = 62.9 bits (131), Expect(4) = 6e-073
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +2
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 326 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 424
Score = 60.2 bits (125), Expect(5) = 2e-036
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -2
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 109 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 2
Score = 57.9 bits (120), Expect(5) = 9e-025
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3 / -3
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS IISATK NSVQQSEH N+L
Sbjct: 441 NKSTGNVLTTIAK*YMSWLIISATKRNSVQQSEHPNYL 328
Score = 55.6 bits (115), Expect(4) = 1e-050
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / +1
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+ AHILF
Sbjct: 328 EIIGVFRLLNRVPFCGADDQPAHILF 405
Score = 43.2 bits (88), Expect(5) = 2e-036
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 261 LGFRASASERPRPAARGPAAEQ 196
Score = 41.8 bits (85), Expect(5) = 9e-025
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1 / -3
Query: 529 DSRP*LRVHLQCVPSNGV 582
DS P*LRVHLQCVPSNGV
Sbjct: 54 DSCP*LRVHLQCVPSNGV 1
Score = 33.6 bits (67), Expect(4) = 2e-073
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3 / -1
Query: 108 ERGSEEASHTTNRPGI 155
+RGSE+ASHTTN PG+
Sbjct: 470 DRGSEKASHTTNPPGM 423
Score = 32.7 bits (65), Expect(5) = 9e-025
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 321 SWAQGFSFREAWSGVQ 368
SW QGFSFREA SG Q
Sbjct: 262 SWVQGFSFREASSGGQ 215
Score = 31.3 bits (62), Expect(5) = 2e-036
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / -3
Query: 110 ARKRGSFTYNKSTGN 154
+RKR SF YNKSTGN
Sbjct: 468 SRKRESFPYNKSTGN 424
Score = 29.5 bits (58), Expect(4) = 6e-073
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 153 FPVDLLYVKLPRFL 112
FPVDLLY KL RFL
Sbjct: 425 FPVDLLYGKLSRFL 466
Score = 29.5 bits (58), Expect(4) = 2e-073
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 326 VQQIPGSSGHPFVA 285
Score = 28.6 bits (56), Expect(4) = 6e-073
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 304 ATKGWPELAGI 272
ATKGWPEL GI
Sbjct: 286 ATKGWPELPGI 318
Score = 27.6 bits (54), Expect(4) = 1e-050
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / +1
Query: 154 IPGRFVVCEASSLPR 110
IPG FVV EA SLPR
Sbjct: 424 IPGGFVVWEAFSLPR 468
Score = 27.2 bits (53), Expect(5) = 9e-025
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / -2
Query: 112 EEARKLHIQQIDRE 153
EEARKL IQQI RE
Sbjct: 466 EEARKLPIQQIHRE 425
Score = 25.8 bits (50), Expect(5) = 2e-036
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -2
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN S +VPATPS P + +L
Sbjct: 325 FNKSLEVPATPSLPETNKVL 266
Score = 24.4 bits (47), Expect(5) = 9e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 266 SIDPRKFRPPLR 301
S +P KFRPPLR
Sbjct: 324 STNPWKFRPPLR 289
Score = 24.0 bits (46), Expect(4) = 1e-050
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 300 RRGGRNLRGSIE 265
RRGGRN +G +E
Sbjct: 290 RRGGRNFQGFVE 325
>gb|BF586098.1|BF586098 FM1_26_F08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 661
Score = 211 bits (456), Expect(3) = 1e-069
Identities = 85/87 (97%), Positives = 86/87 (98%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+AIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 225 DAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 404
Query: 402 IPKNALLCGRASGRRTRPL*S*IPEPK 322
IPKNALLCGRASGRRTRPL*S* PEPK
Sbjct: 405 IPKNALLCGRASGRRTRPL*S*SPEPK 485
Score = 207 bits (446), Expect(3) = 2e-071
Identities = 86/94 (91%), Positives = 89/94 (94%)
Frame = +2 / -1
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 508 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 329
Query: 479 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 580
QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA
Sbjct: 328 QLSDLTFHIPTLSSGM*IAVHD*GYTCNVYRAMA 227
Score = 153 bits (328), Expect(4) = 4e-052
Identities = 66/87 (75%), Positives = 68/87 (78%)
Frame = -3 / +2
Query: 580 RHCSVHIAGVPSVMDGYLHAAGQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPD 401
RHCSVHIAGVPSVMD YLHAAGQRGDVEREV ELGQ AGELVAGREPD
Sbjct: 227 RHCSVHIAGVPSVMDSYLHAAGQRGDVEREVGELGQAVPRPAVLPPRLLAGELVAGREPD 406
Query: 400 PQERAALRPGLWTPDQASLKLNP*AQE 320
PQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 407 PQERTALRPGLWPPDEASLKLKP*TQD 487
Score = 65.7 bits (137), Expect(3) = 2e-071
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +1 / -1
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A+ SSAPQNGT FSNLNTPIIS
Sbjct: 649 MF*LQLLNNI*AD*SSAPQNGTLFSNLNTPIIS 551
Score = 62.9 bits (131), Expect(3) = 1e-069
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +1
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 550 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 648
Score = 62.5 bits (130), Expect(4) = 2e-032
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -2
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSL 256
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL
Sbjct: 648 CFNYNC*IIYELIDHQRHKTELCSAI*TPQLSL 550
Score = 60.2 bits (125), Expect(4) = 2e-032
Identities = 23/36 (63%), Positives = 23/36 (63%)
Frame = +3 / -2
Query: 474 WXXXXXXXXXXXXCPAACR*PSMTEGTPAMCTEQWR 581
W CPAACR* SMTEGTPAMCTEQWR
Sbjct: 333 WPSSPTSRSTSPRCPAACR*LSMTEGTPAMCTEQWR 226
Score = 57.9 bits (120), Expect(4) = 4e-052
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / +3
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+SAHILF
Sbjct: 552 EIIGVFRLLNRVPFCGADDQSAHILF 629
Score = 43.2 bits (88), Expect(4) = 2e-032
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 485 LGFRASASERPRPAARGPAAEQ 420
Score = 36.3 bits (73), Expect(3) = 2e-071
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / -2
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN SP+VPATPSWP + +L
Sbjct: 549 FNKSPEVPATPSWPETNKVL 490
Score = 29.5 bits (58), Expect(4) = 2e-032
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 550 VQQIPGSSGHPFVA 509
Score = 29.0 bits (57), Expect(4) = 4e-052
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 303 PRRGGRNLRGSIE 265
PRRGGRN RG +E
Sbjct: 511 PRRGGRNFRGFVE 549
Score = 29.0 bits (57), Expect(3) = 1e-069
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 305 GHEGVAGTCGDQL 267
GHEGVAGT GD L
Sbjct: 509 GHEGVAGTSGDLL 547
Score = 22.6 bits (43), Expect(4) = 4e-052
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 186 YII*QL*LKH 157
YII*QL*LKH
Sbjct: 620 YII*QL*LKH 649
>gb|AW923132.1|AW923132 DG1_49_C08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 408
Score = 149 bits (321), Expect(5) = 3e-057
Identities = 61/69 (88%), Positives = 64/69 (92%)
Frame = +2 / -1
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 207 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 28
Query: 479 QLSDLTFHI 505
QLSDLTFHI
Sbjct: 27 QLSDLTFHI 1
Score = 149 bits (321), Expect(5) = 7e-056
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = -1 / +2
Query: 504 MWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S*IPEP 325
MWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S* PEP
Sbjct: 2 MWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S*SPEP 181
Query: 324 K 322
K
Sbjct: 182 K 184
Score = 88.1 bits (186), Expect(5) = 2e-033
Identities = 40/62 (64%), Positives = 43/62 (69%)
Frame = -3 / +1
Query: 505 DVEREVRELGQXXXXXXXXXXXXXAGELVAGREPDPQERAALRPGLWTPDQASLKLNP*A 326
+VEREV ELGQ A ELVAGREPDPQER ALRPGLW PD+ASLKL P*
Sbjct: 1 NVEREVGELGQAVPRPAVLPPRLLASELVAGREPDPQERTALRPGLWPPDEASLKLKP*T 180
Query: 325 QE 320
Q+
Sbjct: 181 QD 186
Score = 44.1 bits (90), Expect(5) = 7e-056
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -2 / +2
Query: 254 EMIGVFRLLN*VPFCGADDR 195
E+IGVFRLLN VPFCGADD+
Sbjct: 251 EIIGVFRLLNRVPFCGADDQ 310
Score = 43.7 bits (89), Expect(5) = 3e-057
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1 / -1
Query: 199 SSAPQNGTQFSNLNTPIIS 255
SSAPQNGT FSNLNTPIIS
Sbjct: 306 SSAPQNGTLFSNLNTPIIS 250
Score = 43.2 bits (88), Expect(5) = 4e-021
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG R SASERP PA+RGPAAEQ
Sbjct: 184 LGFRASASERPRPAARGPAAEQ 119
Score = 42.3 bits (86), Expect(5) = 7e-056
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1 / +1
Query: 153 FPVDLLYVKLPRFLAHIIDD 94
FPVDLLY KL RFLAHIID+
Sbjct: 349 FPVDLLYGKLSRFLAHIIDE 408
Score = 41.8 bits (85), Expect(5) = 3e-057
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / -3
Query: 99 Q*CERGSEEASHTTNRPGI 155
Q*CERGSE+ASHTTN PG+
Sbjct: 403 Q*CERGSEKASHTTNPPGM 347
Score = 40.9 bits (83), Expect(5) = 2e-033
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 256 KR*LECSDC*TEFHFVALMIVQ 191
+R*L CSDC*TEF FVALMI Q
Sbjct: 249 QR*LGCSDC*TEFRFVALMINQ 314
Score = 38.2 bits (77), Expect(5) = 4e-021
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +1 / -1
Query: 97 INDVSEEARKLHIQQIDRE 153
INDVSEEARKL IQQI RE
Sbjct: 405 INDVSEEARKLPIQQIHRE 349
Score = 37.7 bits (76), Expect(5) = 2e-033
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -3 / +3
Query: 154 IPGRFVVCEASSLPRSHH** 95
IPG FVV EA SLPRSHH**
Sbjct: 348 IPGGFVVWEAFSLPRSHH** 407
Score = 37.3 bits (75), Expect(5) = 4e-021
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = +2 / -2
Query: 191 LNDHQRHKMELSSAI*TLQSSLPSTSID 274
L DHQRHK EL SAI*T Q SL + S++
Sbjct: 314 LVDHQRHKTELCSAI*TPQLSLFNKSLE 231
Score = 29.9 bits (59), Expect(5) = 3e-057
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / -1
Query: 158 CFSYNC*IIYE 190
CF+YNC*IIYE
Sbjct: 348 CFNYNC*IIYE 316
Score = 29.5 bits (58), Expect(5) = 3e-057
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 249 VQQIPGSSGHPFVA 208
Score = 28.6 bits (56), Expect(5) = 7e-056
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 304 ATKGWPELAGI 272
ATKGWPEL GI
Sbjct: 209 ATKGWPELPGI 241
Score = 25.8 bits (50), Expect(5) = 4e-021
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -2
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN S +VPATPS P + +L
Sbjct: 248 FNKSLEVPATPSLPETNKVL 189
Score = 25.8 bits (50), Expect(5) = 4e-021
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +3 / -2
Query: 141 NRPGINVLATIAK*YMS 191
N+ NVL TIAK*YMS
Sbjct: 365 NKSTGNVLTTIAK*YMS 315
Score = 25.4 bits (49), Expect(5) = 7e-056
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 193 QLIYYLAIVAKT 158
+LIYYLAIV KT
Sbjct: 313 RLIYYLAIVVKT 348
Score = 24.0 bits (46), Expect(5) = 2e-033
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +3
Query: 300 RRGGRNLRGSIE 265
RRGGRN +G +E
Sbjct: 213 RRGGRNFQGFVE 248
Score = 22.6 bits (43), Expect(5) = 2e-033
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +2
Query: 186 YII*QL*LKH 157
YII*QL*LKH
Sbjct: 320 YII*QL*LKH 349
>gb|BF704964.1|BF704964 FM1_47_D04.g2_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 372
Score = 129 bits (276), Expect(4) = 2e-053
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2 / -1
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGS +QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 186 RNKQGLAVLGSRLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 7
Query: 479 QL 484
QL
Sbjct: 6 QL 1
Score = 127 bits (271), Expect(5) = 8e-050
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = -1 / +2
Query: 483 SWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S*IPEPK 322
SWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S* EPK
Sbjct: 2 SWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S*SLEPK 163
Score = 79.0 bits (166), Expect(4) = 5e-034
Identities = 35/55 (63%), Positives = 38/55 (69%)
Frame = -3 / +1
Query: 484 ELGQXXXXXXXXXXXXXAGELVAGREPDPQERAALRPGLWTPDQASLKLNP*AQE 320
+LGQ AGELVAGREPDPQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 1 KLGQAVPRPAVLPPRLLAGELVAGREPDPQERTALRPGLWPPDEASLKLKP*TQD 165
Score = 65.7 bits (137), Expect(4) = 2e-053
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = +1 / -1
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A+ SSAPQNGT FSNLNTPIIS
Sbjct: 327 MF*LQLLNNI*AD*SSAPQNGTLFSNLNTPIIS 229
Score = 62.9 bits (131), Expect(4) = 5e-034
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +3
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 228 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 326
Score = 62.5 bits (130), Expect(4) = 1e-024
Identities = 27/33 (81%), Positives = 28/33 (84%)
Frame = +2 / -2
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSL 256
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL
Sbjct: 326 CFNYNC*IIYELIDHQRHKTELCSAI*TPQLSL 228
Score = 57.9 bits (120), Expect(5) = 8e-050
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = -2 / +2
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+SAHILF
Sbjct: 230 EIIGVFRLLNRVPFCGADDQSAHILF 307
Score = 41.8 bits (85), Expect(4) = 1e-024
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1 / -3
Query: 322 LGLRDSASERPGPASRGPAAEQ 387
LG + SASERP PA+RGPAAEQ
Sbjct: 163 LGFKASASERPRPAARGPAAEQ 98
Score = 35.0 bits (70), Expect(4) = 2e-053
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +1 / -2
Query: 265 FN*SPQVPATPSWP 306
FN SP+VPATPSWP
Sbjct: 227 FNKSPEVPATPSWP 186
Score = 35.0 bits (70), Expect(4) = 2e-053
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +3 / -1
Query: 108 ERGSEEASHTTNRPGI 155
ERGSE+ASHTTN PG+
Sbjct: 372 ERGSEKASHTTNPPGM 325
Score = 32.7 bits (65), Expect(4) = 1e-024
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / -3
Query: 110 ARKRGSFTYNKSTGN 154
ARKR SF YNKSTGN
Sbjct: 370 ARKRESFPYNKSTGN 326
Score = 31.3 bits (62), Expect(5) = 8e-050
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = -1 / +3
Query: 153 FPVDLLYVKLPRFLA 109
FPVDLLY KL RFLA
Sbjct: 327 FPVDLLYGKLSRFLA 371
Score = 29.5 bits (58), Expect(4) = 1e-024
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 228 VQQIPGSSGHPFVA 187
Score = 29.0 bits (57), Expect(5) = 8e-050
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 305 GHEGVAGTCGDQL 267
GHEGVAGT GD L
Sbjct: 187 GHEGVAGTSGDLL 225
Score = 29.0 bits (57), Expect(4) = 5e-034
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 303 PRRGGRNLRGSIE 265
PRRGGRN RG +E
Sbjct: 189 PRRGGRNFRGFVE 227
Score = 27.6 bits (54), Expect(4) = 5e-034
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / +2
Query: 154 IPGRFVVCEASSLPR 110
IPG FVV EA SLPR
Sbjct: 326 IPGGFVVWEAFSLPR 370
Score = 22.6 bits (43), Expect(5) = 8e-050
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +1
Query: 186 YII*QL*LKH 157
YII*QL*LKH
Sbjct: 298 YII*QL*LKH 327
>gb|BF420927.1|BF420927 FM1_5_A06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 339
Score = 161 bits (347), Expect(3) = 8e-052
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = -1 / +3
Query: 519 LDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S 340
LDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S
Sbjct: 3 LDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLCGRASGRRTRPL*S 182
Query: 339 *IPEPK 322
* PEPK
Sbjct: 183 *SPEPK 200
Score = 158 bits (339), Expect(3) = 3e-051
Identities = 64/74 (86%), Positives = 69/74 (93%)
Frame = +2 / -3
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 478
R + + LGSG+QLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA
Sbjct: 223 RNKQGLAVLGSGLQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLA 44
Query: 479 QLSDLTFHIPTLSS 520
QLSDLTFH+PTLS+
Sbjct: 43 QLSDLTFHMPTLSN 2
Score = 100 bits (212), Expect(3) = 2e-031
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = -3 / +2
Query: 517 GQRGDVEREVRELGQXXXXXXXXXXXXXAGELVAGREPDPQERAALRPGLWTPDQASLKL 338
GQRG VEREV ELGQ AGELVAGREPDPQER ALRPGLW PD+ASLKL
Sbjct: 5 GQRGHVEREVGELGQAVPRPAVLPPRLLAGELVAGREPDPQERTALRPGLWPPDEASLKL 184
Query: 337 NP*AQE 320
P* Q+
Sbjct: 185 KP*TQD 202
Score = 51.5 bits (106), Expect(3) = 8e-052
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = -2 / +3
Query: 254 EMIGVFRLLN*VPFCGADDRSAH 186
E+IGVFRLLN VPFCGADD+SAH
Sbjct: 267 EIIGVFRLLNRVPFCGADDQSAH 335
Score = 46.0 bits (94), Expect(3) = 3e-051
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +1 / -3
Query: 184 I*AERSSAPQNGTQFSNLNTPIIS 255
+*A+ SSAPQNGT FSNLNTPIIS
Sbjct: 337 L*AD*SSAPQNGTLFSNLNTPIIS 266
Score = 44.6 bits (91), Expect(3) = 2e-031
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3 / +1
Query: 256 KR*LECSDC*TEFHFVALMIVQLI 185
+R*L CSDC*TEF FVALMI QLI
Sbjct: 265 QR*LGCSDC*TEFRFVALMINQLI 336
Score = 36.3 bits (73), Expect(3) = 3e-051
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +1 / -1
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN SP+VPATPSWP + +L
Sbjct: 264 FNKSPEVPATPSWPETNKVL 205
Score = 29.0 bits (57), Expect(3) = 2e-031
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 303 PRRGGRNLRGSIE 265
PRRGGRN RG +E
Sbjct: 226 PRRGGRNFRGFVE 264
Score = 29.0 bits (57), Expect(3) = 8e-052
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / +2
Query: 305 GHEGVAGTCGDQL 267
GHEGVAGT GD L
Sbjct: 224 GHEGVAGTSGDLL 262
>gb|CD220414.1|CD220414 CCC1_67_G07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_67_G07_A007 3', mRNA sequence
Length = 346
Score = 80.3 bits (169), Expect(4) = 9e-040
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = +2 / -3
Query: 299 RGRTNMVFLGSGIQLQRGLVRRPEARPQSSAFLGIGFSSRHE 424
R + + LGSG+QLQRGLVRRPEARPQS+AFLGIGFS+RHE
Sbjct: 128 RNKQGLAVLGSGLQLQRGLVRRPEARPQSTAFLGIGFSTRHE 3
Score = 78.5 bits (165), Expect(4) = 3e-040
Identities = 32/35 (91%), Positives = 33/35 (94%)
Frame = -1 / +1
Query: 426 NSWRDENPIPKNALLCGRASGRRTRPL*S*IPEPK 322
NSWR ENPIPKNA+LCGRASGRRTRPL*S* PEPK
Sbjct: 1 NSWRVENPIPKNAVLCGRASGRRTRPL*S*SPEPK 105
Score = 73.5 bits (154), Expect(4) = 4e-032
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3 / +3
Query: 424 LVAGREPDPQERAALRPGLWTPDQASLKLNP*AQE 320
LVAGREPDPQER ALRPGLW PD+ASLKL P* Q+
Sbjct: 3 LVAGREPDPQERCALRPGLWPPDEASLKLKP*TQD 107
Score = 64.3 bits (134), Expect(4) = 9e-040
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +2 / -1
Query: 158 CFSYNC*IIYELNDHQRHKMELSSAI*TLQSSLPSTSID 274
CF+YNC*IIYEL DHQRHK EL SAI*T Q SL + S++
Sbjct: 268 CFNYNC*IIYELVDHQRHKTELCSAI*TPQLSLFNKSLE 152
Score = 63.8 bits (133), Expect(4) = 5e-026
Identities = 30/33 (90%), Positives = 30/33 (90%)
Frame = +1 / -3
Query: 157 MF*LQLLNNI*AERSSAPQNGTQFSNLNTPIIS 255
MF*LQLLNNI*A SSAPQNGT FSNLNTPIIS
Sbjct: 269 MF*LQLLNNI*AG*SSAPQNGTLFSNLNTPIIS 171
Score = 62.9 bits (131), Expect(4) = 3e-040
Identities = 28/33 (84%), Positives = 29/33 (87%)
Frame = -3 / +2
Query: 256 KR*LECSDC*TEFHFVALMIVQLIYYLAIVAKT 158
+R*L CSDC*TEF FVALMI QLIYYLAIV KT
Sbjct: 170 QR*LGCSDC*TEFRFVALMINQLIYYLAIVVKT 268
Score = 57.9 bits (120), Expect(4) = 8e-021
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = +3 / -2
Query: 141 NRPGINVLATIAK*YMS*TIISATKWNSVQQSEHSNHL 254
N+ NVL TIAK*YMS IISATK NSVQQSEH N+L
Sbjct: 285 NKSTGNVLTTIAK*YMSWLIISATKRNSVQQSEHPNYL 172
Score = 55.6 bits (115), Expect(4) = 4e-032
Identities = 22/26 (84%), Positives = 24/26 (92%)
Frame = -2 / +1
Query: 254 EMIGVFRLLN*VPFCGADDRSAHILF 177
E+IGVFRLLN VPFCGADD+ AHILF
Sbjct: 172 EIIGVFRLLNRVPFCGADDQPAHILF 249
Score = 49.6 bits (102), Expect(4) = 3e-040
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = -1 / +2
Query: 153 FPVDLLYVKLPRFLAHIIDDDN 88
FPVDLLY KL RFLAHIIDDDN
Sbjct: 269 FPVDLLYGKLSRFLAHIIDDDN 334
Score = 43.7 bits (89), Expect(4) = 9e-040
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / -1
Query: 88 IIIINDVSEEARKLHIQQIDRE 153
IIIINDVSEEARKL IQQI RE
Sbjct: 334 IIIINDVSEEARKLPIQQIHRE 269
Score = 41.8 bits (85), Expect(4) = 5e-026
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / -3
Query: 99 Q*CERGSEEASHTTNRPGI 155
Q*CERGSE+ASHTTN PG+
Sbjct: 323 Q*CERGSEKASHTTNPPGM 267
Score = 39.1 bits (79), Expect(4) = 5e-026
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +1 / -2
Query: 322 LGLRDSASERPGPASRGPAAE 384
LG R SASERP PA+RGPAA+
Sbjct: 105 LGFRASASERPRPAARGPAAK 43
Score = 38.6 bits (78), Expect(4) = 4e-032
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = -3 / +1
Query: 154 IPGRFVVCEASSLPRSHH**** 89
IPG FVV EA SLPRSHH****
Sbjct: 268 IPGGFVVWEAFSLPRSHH**** 333
Score = 37.7 bits (76), Expect(4) = 8e-021
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -2
Query: 101 MM*ARKRGSFTYNKSTGN 154
MM*ARKR SF YNKSTGN
Sbjct: 321 MM*ARKRESFPYNKSTGN 268
Score = 32.7 bits (65), Expect(4) = 8e-021
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 321 SWAQGFSFREAWSGVQ 368
SW QGFSFREA SG Q
Sbjct: 106 SWVQGFSFREASSGGQ 59
Score = 29.5 bits (58), Expect(4) = 9e-040
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 264 LQLIPASSGHPFVA 305
+Q IP SSGHPFVA
Sbjct: 170 VQQIPGSSGHPFVA 129
Score = 28.6 bits (56), Expect(4) = 3e-040
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -3 / +1
Query: 304 ATKGWPELAGI 272
ATKGWPEL GI
Sbjct: 130 ATKGWPELPGI 162
Score = 25.8 bits (50), Expect(4) = 5e-026
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +1 / -1
Query: 265 FN*SPQVPATPSWPNKHGLL 324
FN S +VPATPS P + +L
Sbjct: 169 FNKSLEVPATPSLPETNKVL 110
Score = 24.4 bits (47), Expect(4) = 8e-021
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 266 SIDPRKFRPPLR 301
S +P KFRPPLR
Sbjct: 168 STNPWKFRPPLR 133
Score = 24.0 bits (46), Expect(4) = 4e-032
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 300 RRGGRNLRGSIE 265
RRGGRN +G +E
Sbjct: 134 RRGGRNFQGFVE 169
>gb|CW182759.1|CW182759 104_598_11164251_116_36667_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11164251, DNA
sequence
Length = 687
Score = 161 bits (347), Expect = 6e-039
Identities = 63/72 (87%), Positives = 69/72 (95%)
Frame = -1 / -3
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP+SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++P+ S RDE PIPKNALLC
Sbjct: 247 QVYPRSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTPSTSLRDEYPIPKNALLC 68
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 67 GRAAGRRTRPL* 32
Score = 125 bits (267), Expect = 7e-028
Identities = 54/69 (78%), Positives = 57/69 (82%)
Frame = +2 / +3
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLVRRP ARP SAFLGIG+SSR++ G TRR*NC PRYCLAQ SD TFHIPTLS GM*
Sbjct: 39 GLVRRPAARPHRSAFLGIGYSSRNDVDGVQTRR*NCCPRYCLAQFSDRTFHIPTLSRGM* 218
Query: 530 IAVHD*GYT 556
IAVHD GYT
Sbjct: 219 IAVHDLGYT 245
>gb|CW190148.1|CW190148 104_611_11174347_116_36749_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174347, DNA
sequence
Length = 688
Score = 161 bits (347), Expect = 6e-039
Identities = 63/72 (87%), Positives = 69/72 (95%)
Frame = -1 / +3
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP+SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++P+ S RDE PIPKNALLC
Sbjct: 183 QVYPRSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTPSTSLRDEYPIPKNALLC 362
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 363 GRAAGRRTRPL* 398
Score = 125 bits (267), Expect = 7e-028
Identities = 54/69 (78%), Positives = 57/69 (82%)
Frame = +2 / -1
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLVRRP ARP SAFLGIG+SSR++ G TRR*NC PRYCLAQ SD TFHIPTLS GM*
Sbjct: 391 GLVRRPAARPHRSAFLGIGYSSRNDVDGVQTRR*NCCPRYCLAQFSDRTFHIPTLSRGM* 212
Query: 530 IAVHD*GYT 556
IAVHD GYT
Sbjct: 211 IAVHDLGYT 185
>gb|CW216844.1|CW216844 104_649_11195330_116_37124_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195330, DNA
sequence
Length = 706
Score = 161 bits (347), Expect = 6e-039
Identities = 63/72 (87%), Positives = 69/72 (95%)
Frame = -1 / -1
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP+SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++P+ S RDE PIPKNALLC
Sbjct: 472 QVYPRSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTPSTSLRDEYPIPKNALLC 293
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 292 GRAAGRRTRPL* 257
Score = 125 bits (267), Expect = 7e-028
Identities = 54/69 (78%), Positives = 57/69 (82%)
Frame = +2 / +3
Query: 350 GLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM* 529
GLVRRP ARP SAFLGIG+SSR++ G TRR*NC PRYCLAQ SD TFHIPTLS GM*
Sbjct: 264 GLVRRPAARPHRSAFLGIGYSSRNDVDGVQTRR*NCCPRYCLAQFSDRTFHIPTLSRGM* 443
Query: 530 IAVHD*GYT 556
IAVHD GYT
Sbjct: 444 IAVHDLGYT 470
>gb|CW266285.1|CW266285 104_736_11232344_116_35282_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232344, DNA
sequence
Length = 649
Score = 135 bits (290), Expect = 5e-031
Identities = 50/72 (69%), Positives = 64/72 (88%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+ WTA+ + LDNVGMWN+RSE WAR+YLGQQFYLRVY+P+ S+RDE P
Sbjct: 95 DAVSRCTVQVYPRGWTAVLIALDNVGMWNMRSEVWARRYLGQQFYLRVYTPSRSFRDELP 274
Query: 402 IPKNALLCGRAS 367
+P NALLCGRA+
Sbjct: 275 MPDNALLCGRAT 310
>gb|CW371735.1|CW371735 fsbb001f047f12k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f047f12, DNA
sequence
Length = 645
Score = 135 bits (290), Expect = 5e-031
Identities = 50/72 (69%), Positives = 64/72 (88%)
Frame = -1 / -2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+ WTA+ + LDNVGMWN+RSE WAR+YLGQQFYLRVY+P+ S+RDE P
Sbjct: 467 DAVSRCTVQVYPRGWTAVLIALDNVGMWNMRSEVWARRYLGQQFYLRVYTPSRSFRDELP 288
Query: 402 IPKNALLCGRAS 367
+P NALLCGRA+
Sbjct: 287 MPDNALLCGRAT 252
>gb|CW473222.1|CW473222 fsbb001f228i05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f228i05, DNA
sequence
Length = 620
Score = 135 bits (290), Expect = 5e-031
Identities = 50/72 (69%), Positives = 64/72 (88%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+ WTA+ + LDNVGMWN+RSE WAR+YLGQQFYLRVY+P+ S+RDE P
Sbjct: 428 DAVSRCTVQVYPRGWTAVLIALDNVGMWNMRSEVWARRYLGQQFYLRVYTPSRSFRDELP 249
Query: 402 IPKNALLCGRAS 367
+P NALLCGRA+
Sbjct: 248 MPDNALLCGRAT 213
>gb|CF482627.1|CF482627 POL1_8_D05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_8_D05_A002 3', mRNA sequence
Length = 524
Score = 135 bits (290), Expect = 5e-031
Identities = 50/72 (69%), Positives = 64/72 (88%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+ WTA+ + LDNVGMWN+RSE WAR+YLGQQFYLRVY+P+ S+RDE P
Sbjct: 56 DAVSRCTVQVYPRGWTAVLIALDNVGMWNMRSEVWARRYLGQQFYLRVYTPSRSFRDELP 235
Query: 402 IPKNALLCGRAS 367
+P NALLCGRA+
Sbjct: 236 MPDNALLCGRAT 271
>gb|CF488326.1|CF488326 POL1_49_E06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_E06_A002 3', mRNA sequence
Length = 521
Score = 135 bits (290), Expect = 5e-031
Identities = 50/72 (69%), Positives = 64/72 (88%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+ WTA+ + LDNVGMWN+RSE WAR+YLGQQFYLRVY+P+ S+RDE P
Sbjct: 56 DAVSRCTVQVYPRGWTAVLIALDNVGMWNMRSEVWARRYLGQQFYLRVYTPSRSFRDELP 235
Query: 402 IPKNALLCGRAS 367
+P NALLCGRA+
Sbjct: 236 MPDNALLCGRAT 271
>gb|CF489854.1|CF489854 POL1_61_B07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B07_A002 3', mRNA sequence
Length = 523
Score = 135 bits (290), Expect = 5e-031
Identities = 50/72 (69%), Positives = 64/72 (88%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+ WTA+ + LDNVGMWN+RSE WAR+YLGQQFYLRVY+P+ S+RDE P
Sbjct: 58 DAVSRCTVQVYPRGWTAVLIALDNVGMWNMRSEVWARRYLGQQFYLRVYTPSRSFRDELP 237
Query: 402 IPKNALLCGRAS 367
+P NALLCGRA+
Sbjct: 238 MPDNALLCGRAT 273
>gb|CF486499.1|CF486499 POL1_38_B11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_38_B11_A002 3', mRNA sequence
Length = 523
Score = 127 bits (271), Expect = 2e-028
Identities = 47/72 (65%), Positives = 61/72 (84%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP+ WTA+ + LDNVGMWN+RSE WAR+YLGQQFYLRVY+P+ S+RDE P
Sbjct: 54 DAVSRCTVQVYPRGWTAVLIALDNVGMWNMRSEVWARRYLGQQFYLRVYTPSRSFRDELP 233
Query: 402 IPKNALLCGRAS 367
+P NA GRA+
Sbjct: 234 MPDNAFFWGRAT 269
>gb|CX611383.1|CX611383 ANR1_24_G11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_24_G11_A002 3', mRNA sequence
Length = 725
Score = 111 bits (238), Expect = 7e-024
Identities = 43/73 (58%), Positives = 56/73 (76%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A AR+T+QVYP W+AI + LDN GMWN+RS W RQYLGQQ YLRV++P S+ +E
Sbjct: 192 DAQARHTVQVYPNGWSAILVSLDNQGMWNLRSAIWDRQYLGQQLYLRVWTPQQSFSNEYA 371
Query: 402 IPKNALLCGRASG 364
IP +A+LCG+A G
Sbjct: 372 IPTDAILCGKAVG 410
>gb|BG047687.1|BG047687 OV1_26_F01.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 437
Score = 110 bits (235), Expect = 2e-023
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R+T+QVYP+SWTAI + DN GMW+VRS W R YLG+QFY+ V SP +S RDE
Sbjct: 45 DAVSRHTIQVYPRSWTAIMLTFDNAGMWSVRSNIWERYYLGEQFYISVISPEHSLRDEYN 224
Query: 402 IPKNALLCGRASG 364
+P N L CG+ G
Sbjct: 225 MPDNDLRCGKVVG 263
>gb|CW216845.1|CW216845 104_649_11195330_148_37123_001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195330, DNA
sequence
Length = 667
Score = 110 bits (234), Expect = 2e-023
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = -1 / +3
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWR 415
QVYP+SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++P+ S R
Sbjct: 522 QVYPRSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTPSTSLR 665
>gb|BG048012.1|BG048012 OV1_26_F01.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 551
Score = 108 bits (230), Expect = 9e-023
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = -1 / +3
Query: 576 IARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIP 397
++R+T+QVYP+SWTAI + DN GMW+VRS W R YLG+QFY+ V SP +S RDE +P
Sbjct: 3 VSRHTIQVYPRSWTAIMLTFDNAGMWSVRSNIWERYYLGEQFYISVISPEHSLRDEYNMP 182
Query: 396 KNALLCGRASG 364
N L CG+ G
Sbjct: 183 DNDLRCGKVVG 215
>gb|CW070516.1|CW070516 104_321_10526807_1_30090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10526807, DNA
sequence
Length = 622
Score = 105 bits (223), Expect = 8e-022
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R+T+QVYP+SWTAI + DN GMW+VRS W R YLG+QFY+ V SP +S RDE
Sbjct: 299 DAVSRHTIQVYPRSWTAIMLTFDNAGMWSVRSNIWERYYLGEQFYISVISPEHSLRDEYN 120
Query: 402 IPKNALLCGRASG 364
+P N L G+ G
Sbjct: 119 MPDNDLRRGKVVG 81
>gb|CW333518.1|CW333518 104_831_11481987_116_36043_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481987, DNA
sequence
Length = 600
Score = 105 bits (223), Expect = 8e-022
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ M DN GMW++RS W R YLG+Q Y+ V SP S RDE
Sbjct: 265 DTVSRHTVQVYPRSWTAVMMTFDNAGMWSIRSNIWERNYLGEQLYISVTSPERSLRDEYN 444
Query: 402 IPKNALLCGRASG 364
+P+ +L CG+ G
Sbjct: 445 MPETSLRCGKVVG 483
>gb|CW333499.1|CW333499 104_831_11481987_148_36044_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11481987, DNA
sequence
Length = 661
Score = 104 bits (222), Expect = 1e-021
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ M DN GMW++RS W R YLG+Q Y+ V SP S RDE
Sbjct: 599 DTLSRHTVQVYPRSWTAVMMTFDNAGMWSIRSNIWERNYLGEQLYISVTSPERSLRDEYN 420
Query: 402 IPKNALLCGRASG 364
+P+ +L CG+ G
Sbjct: 419 MPETSLRCGKVVG 381
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 580,819,977
Number of Sequences: 832831
Number of extensions: 7171292
Number of successful extensions: 78363
Number of sequences better than 1.0e-020: 30
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17109451359
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)