TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3173057.2.1
(1264 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO199449.1|CO199449 GEO2_1_F10.b1_A032 Root gravitropism... 262 e-127
gb|DR070649.1|DR070649 RTDK1_14_F01.g1_A029 Roots, dark Pin... 266 e-121
gb|CO167267.1|CO167267 FLD1_67_H10.g1_A029 Root flooded Pin... 266 e-109
gb|DR011623.1|DR011623 HEAT1_6_H03.g1_A029 Root at 37 C for... 266 e-108
gb|DR687672.1|DR687672 EST1077754 Normalized pine embryo li... 260 e-108
gb|DN462584.1|DN462584 EST958383 Sequencing ESTs from loblo... 266 e-108
gb|CF398991.1|CF398991 RTDS3_11_H09.g1_A022 Drought-stresse... 266 e-106
gb|CX650902.1|CX650902 COLD1_48_G09.g1_A029 Root cold Pinus... 266 e-106
gb|DT634371.1|DT634371 EST1149302 Normalized pine embryo li... 260 e-104
gb|CF392022.1|CF392022 RTDR3_12_H09.g1_A022 Loblolly pine r... 253 e-104
gb|CO165167.1|CO165167 FLD1_52_G05.g1_A029 Root flooded Pin... 250 e-104
gb|CF393744.1|CF393744 RTDS2_1_F11.b1_A021 Drought-stressed... 266 e-104
gb|DR012887.1|DR012887 HEAT1_15_D05.g1_A029 Root at 37 C fo... 260 e-103
gb|CF393377.1|CF393377 RTDR3_20_F10.g1_A022 Loblolly pine r... 266 e-100
gb|DR693562.1|DR693562 EST1083651 Normalized pine embryo li... 188 e-100
gb|CX716008.1|CX716008 RTPQ1_39_C01.g1_A032 Roots treated w... 265 4e-099
gb|CF402626.1|CF402626 RTWW1_21_D01.g1_A015 Well-watered lo... 258 4e-098
gb|DT624915.1|DT624915 EST1159190 Sequencing ESTs from lobl... 233 6e-098
gb|CV143704.1|CV143704 EST854913 Sequencing ESTs from loblo... 233 6e-098
gb|CF668985.1|CF668985 RTCNT1_39_G12.g1_A029 Root control P... 258 8e-097
gb|CF394277.1|CF394277 RTDS2_4_A02.g1_A021 Drought-stressed... 250 8e-096
gb|CF398001.1|CF398001 RTDS3_22_F03.b1_A022 Drought-stresse... 250 2e-094
gb|BX252311.1|BX252311 BX252311 Pinus pinaster differenciat... 213 6e-094
gb|DR019198.1|DR019198 STRS1_28_A04.g1_A034 Shoot tip pitch... 119 9e-092
gb|CF668995.1|CF668995 RTCNT1_39_H10.g1_A029 Root control P... 211 2e-091
gb|CF385673.1|CF385673 RTDR1_5_B07.g1_A015 Loblolly pine ro... 206 7e-090
gb|CO364426.1|CO364426 RTK1_15_D07.g1_A029 Roots minus pota... 198 2e-088
gb|DR022576.1|DR022576 STRS1_52_B04.b1_A034 Shoot tip pitch... 115 1e-087
gb|CV031915.1|CV031915 RTNACL1_4_C06.g1_A029 Roots plus add... 223 1e-087
gb|CX714844.1|CX714844 RTPQ1_27_B02.g1_A032 Roots treated w... 182 1e-083
gb|CF392425.1|CF392425 RTDR3_7_B09.g1_A022 Loblolly pine ro... 247 2e-083
gb|CF668432.1|CF668432 RTCNT1_36_A09.g1_A029 Root control P... 182 1e-082
gb|CF671372.1|CF671372 RTCNT1_56_D09.g1_A029 Root control P... 182 1e-082
gb|DR177175.1|DR177175 RTMNUT1_3_C10.g1_A029 Roots minus mi... 177 3e-082
gb|CO167863.1|CO167863 FLD1_71_E11.g1_A029 Root flooded Pin... 180 4e-082
gb|DR102486.1|DR102486 STRR1_81_B04.g1_A033 Stem Response R... 266 7e-081
gb|CX652206.1|CX652206 COLD1_57_D09.g1_A029 Root cold Pinus... 203 2e-080
gb|DT626537.1|DT626537 EST1158461 Sequencing ESTs from lobl... 171 1e-079
gb|CV136191.1|CV136191 EST847400 Sequencing ESTs from loblo... 171 1e-079
gb|DR180554.1|DR180554 RTMNUT1_33_H11.b1_A029 Roots minus m... 193 1e-078
gb|CF398437.1|CF398437 RTDS3_12_E06.g1_A022 Drought-stresse... 167 2e-078
gb|DR743712.1|DR743712 RTCU1_17_E09.g1_A029 Roots plus adde... 167 2e-078
gb|CX714408.1|CX714408 RTPQ1_22_A12.b1_A032 Roots treated w... 118 2e-077
gb|DR069530.1|DR069530 RTDK1_7_F12.g1_A029 Roots, dark Pinu... 279 7e-077
gb|DR179208.1|DR179208 RTMNUT1_16_E04.g1_A029 Roots minus m... 115 9e-077
gb|CF402920.1|CF402920 RTWW1_23_E10.g1_A015 Well-watered lo... 160 2e-076
gb|DR179132.1|DR179132 RTMNUT1_16_E04.b1_A029 Roots minus m... 115 3e-076
gb|CF390910.1|CF390910 RTDR3_2_D03.g1_A022 Loblolly pine ro... 156 4e-075
gb|DR178895.1|DR178895 RTMNUT1_14_D10.g1_A029 Roots minus m... 145 1e-072
gb|CO164051.1|CO164051 FLD1_45_B05.g1_A029 Root flooded Pin... 175 4e-072
gb|CX652372.1|CX652372 COLD1_58_D08.g1_A029 Root cold Pinus... 174 8e-072
gb|DR110730.1|DR110730 RTS1_12_C12.g1_A029 Roots minus sulf... 93 1e-071
gb|DR071910.1|DR071910 RTDK1_22_G12.g1_A029 Roots, dark Pin... 144 2e-071
gb|CO198589.1|CO198589 GEO1_14_H05.g1_A029 Root gravitropis... 248 1e-070
gb|CF402592.1|CF402592 RTWW1_21_C08.g1_A015 Well-watered lo... 93 1e-069
gb|CF386025.1|CF386025 RTDR1_7_H02.g1_A015 Loblolly pine ro... 93 1e-069
gb|BI643863.1|BI643863 NXPV_123_H11_F NXPV (Nsf Xylem Plani... 182 2e-069
gb|CF664002.1|CF664002 RTCNT1_6_C10.g1_A029 Root control Pi... 182 6e-069
gb|CR393091.1|CR393091 CR393091 RN Pinus pinaster cDNA clon... 122 3e-067
gb|CO201395.1|CO201395 RTCNT2_5_B04.g1_A029 Root control 2 ... 232 9e-067
gb|CO175004.1|CO175004 NDL1_47_E08.g1_A029 Needles control ... 93 1e-066
gb|CO163181.1|CO163181 FLD1_40_B02.b1_A029 Root flooded Pin... 93 1e-066
gb|BE431362.1|BE431362 NXNV_181_C06_F Nsf Xylem Normal wood... 211 2e-066
gb|DR022645.1|DR022645 STRS1_52_B04.g1_A034 Shoot tip pitch... 115 1e-065
gb|CV034796.1|CV034796 RTNACL1_11_D10.g1_A029 Roots plus ad... 94 2e-065
gb|CF394599.1|CF394599 RTDS2_6_A01.g1_A021 Drought-stressed... 93 7e-064
gb|CF391723.1|CF391723 RTDR3_11_H08.g1_A022 Loblolly pine r... 94 9e-064
gb|CO363972.1|CO363972 RTK1_12_H04.g1_A029 Roots minus pota... 98 4e-063
gb|DR387430.1|DR387430 RTHG1_21_E08.g2_A029 Roots plus adde... 180 6e-063
gb|DR120380.1|DR120380 RTMG1_29_G10.b1_A029 Roots minus mag... 121 1e-062
gb|AW985104.1|AW985104 NXNV_133_A03_F Nsf Xylem Normal wood... 149 2e-062
gb|CF401560.1|CF401560 RTWW1_13_C07.g1_A015 Well-watered lo... 96 7e-062
gb|DR117786.1|DR117786 RTMG1_9_E04.b1_A029 Roots minus magn... 116 2e-061
gb|DR069440.1|DR069440 RTDK1_7_F12.b1_A029 Roots, dark Pinu... 234 1e-060
gb|DR049359.1|DR049359 RTBOR1_15_H04.g1_A029 Roots plus add... 121 2e-060
gb|CF395195.1|CF395195 RTDS2_10_C06.b1_A021 Drought-stresse... 115 5e-060
gb|CO167354.1|CO167354 FLD1_68_A07.g1_A029 Root flooded Pin... 123 7e-060
gb|DR020694.1|DR020694 STRS1_38_E06.g1_A034 Shoot tip pitch... 123 4e-059
gb|DR094689.1|DR094689 STRR1_16_D07.b1_A033 Stem Response R... 90 4e-059
gb|DR097821.1|DR097821 STRR1_37_F05.b1_A033 Stem Response R... 120 9e-059
gb|BX682770.1|BX682770 BX682770 Pinus pinaster differenciat... 114 1e-057
gb|CO363878.1|CO363878 RTK1_12_H04.b1_A029 Roots minus pota... 89 7e-057
gb|DR094013.1|DR094013 STRR1_11_H02.g1_A033 Stem Response R... 121 1e-056
gb|CV032397.1|CV032397 RTNACL1_7_G06.g2_A029 Roots plus add... 121 2e-056
gb|BX682795.1|BX682795 BX682795 Pinus pinaster differenciat... 114 9e-056
gb|BG040056.1|BG040056 NXSI_106_A01_F NXSI (Nsf Xylem Side ... 121 6e-055
gb|CO163975.1|CO163975 FLD1_45_B05.b1_A029 Root flooded Pin... 121 1e-054
gb|DR017640.1|DR017640 STRS1_17_C06.g1_A034 Shoot tip pitch... 123 2e-054
gb|CF402904.1|CF402904 RTWW1_23_A07.g1_A015 Well-watered lo... 90 6e-054
gb|DR023743.1|DR023743 STRS1_59_F05.g1_A034 Shoot tip pitch... 211 9e-054
gb|CX651491.1|CX651491 COLD1_52_F07.g1_A029 Root cold Pinus... 108 1e-053
gb|CF472455.1|CF472455 RTDS1_9_H12.g1_A015 Drought-stressed... 122 1e-052
gb|DR166102.1|DR166102 RTPHOS1_9_A07.g2_A029 Roots minus ph... 194 2e-052
gb|CO200926.1|CO200926 RTCNT2_2_B04.g1_A029 Root control 2 ... 117 2e-052
gb|AW042608.1|AW042608 ST23H06 Pine TriplEx shoot tip libra... 114 6e-052
gb|CF668978.1|CF668978 RTCNT1_39_G05.g1_A029 Root control P... 93 2e-051
gb|CX712619.1|CX712619 RTPQ1_3_D08.g1_A032 Roots treated wi... 123 5e-051
gb|CF666059.1|CF666059 RTCNT1_20_A03.g1_A029 Root control P... 117 5e-051
gb|DR059638.1|DR059638 RTNIT1_18_G11.g1_A029 Roots minus ni... 123 7e-051
gb|CO160544.1|CO160544 FLD1_21_F06.g1_A029 Root flooded Pin... 121 7e-051
gb|AW010403.1|AW010403 ST06D07 Pine TriplEx shoot tip libra... 118 9e-051
gb|CF475497.1|CF475497 RTWW2_12_G05.g1_A021 Well-watered lo... 101 3e-050
gb|DR014140.1|DR014140 HEAT1_23_D09.g1_A029 Root at 37 C fo... 121 7e-050
gb|CV032287.1|CV032287 RTNACL1_7_D04.b1_A029 Roots plus add... 115 9e-050
gb|DR070631.1|DR070631 RTDK1_14_D03.g1_A029 Roots, dark Pin... 121 1e-049
gb|BF609538.1|BF609538 NXSI_043_G06_F NXSI (Nsf Xylem Side ... 184 6e-049
gb|CF393742.1|CF393742 RTDS2_1_G06.b1_A021 Drought-stressed... 117 1e-048
gb|AW497835.1|AW497835 PC02G12 Pine TriplEx pollen cone lib... 114 2e-048
gb|BQ290652.1|BQ290652 NXRV047_H08_F NXRV (Nsf Xylem Root w... 117 2e-048
gb|CF402022.1|CF402022 RTWW1_16_C02.g1_A015 Well-watered lo... 90 4e-048
gb|CO200852.1|CO200852 RTCNT2_2_B04.b1_A029 Root control 2 ... 121 5e-048
gb|DR071830.1|DR071830 RTDK1_22_G12.b1_A029 Roots, dark Pin... 121 5e-048
gb|BM492188.1|BM492188 NXRV_022_A04_F NXRV (Nsf Xylem Root ... 105 1e-047
gb|DR059551.1|DR059551 RTNIT1_18_G11.b1_A029 Roots minus ni... 121 1e-047
gb|CO160476.1|CO160476 FLD1_21_F06.b1_A029 Root flooded Pin... 115 1e-047
gb|CX712836.1|CX712836 RTPQ1_5_D01.b1_A032 Roots treated wi... 111 3e-047
gb|CO165160.1|CO165160 FLD1_52_F08.g1_A029 Root flooded Pin... 113 4e-047
gb|CO165085.1|CO165085 FLD1_52_F08.b1_A029 Root flooded Pin... 121 5e-047
gb|DR070580.1|DR070580 RTDK1_14_F01.b1_A029 Roots, dark Pin... 121 5e-047
gb|DR025585.1|DR025585 STRS1_72_B06.g1_A034 Shoot tip pitch... 121 6e-047
gb|BI398009.1|BI398009 NXPV_113_D03_F NXPV (Nsf Xylem Plani... 113 9e-047
gb|BG832777.1|BG832777 NXPV_079_G07_F NXPV (Nsf Xylem Plani... 117 1e-046
gb|CO167635.1|CO167635 FLD1_70_E03.b1_A029 Root flooded Pin... 121 3e-046
gb|BM427822.1|BM427822 NXRV_003_G04_F NXRV (Nsf Xylem Root ... 112 9e-046
gb|CX715642.1|CX715642 RTPQ1_35_C04.g1_A032 Roots treated w... 93 2e-045
gb|CO162221.1|CO162221 FLD1_34_A09.b1_A029 Root flooded Pin... 70 3e-045
gb|CF400435.1|CF400435 RTWW1_5_C12.g1_A015 Well-watered lob... 90 4e-045
gb|CO163261.1|CO163261 FLD1_40_B02.g1_A029 Root flooded Pin... 94 4e-045
gb|CO201193.1|CO201193 RTCNT2_4_E07.b1_A029 Root control 2 ... 119 7e-045
gb|CO160854.1|CO160854 FLD1_25_C05.b1_A029 Root flooded Pin... 121 1e-044
gb|CF479183.1|CF479183 RTWW3_24_G03.g1_A022 Well-watered lo... 90 1e-044
gb|DR181072.1|DR181072 RTMNUT1_36_D01.g1_A029 Roots minus m... 117 3e-044
gb|CF477408.1|CF477408 RTWW3_7_H05.g1_A022 Well-watered lob... 100 7e-044
gb|BX682771.1|BX682771 BX682771 Pinus pinaster differenciat... 114 1e-043
gb|CF386190.1|CF386190 RTDR1_8_H07.g1_A015 Loblolly pine ro... 99 1e-043
gb|DR098447.1|DR098447 STRR1_45_C05.g1_A033 Stem Response R... 99 2e-043
gb|CF666473.1|CF666473 RTCNT1_23_C04.g1_A029 Root control P... 100 2e-043
gb|CF385582.1|CF385582 RTDR1_4_D05.g1_A015 Loblolly pine ro... 99 2e-043
gb|CF400442.1|CF400442 RTWW1_5_G06.g1_A015 Well-watered lob... 99 2e-043
gb|CO199661.1|CO199661 GEO2_2_E07.g1_A032 Root gravitropism... 99 2e-043
gb|DR387123.1|DR387123 RTHG1_19_D04.g1_A029 Roots plus adde... 99 2e-043
gb|CF402124.1|CF402124 RTWW1_20_E10.g1_A015 Well-watered lo... 99 2e-043
gb|CF387273.1|CF387273 RTDR1_11_C05.g1_A015 Loblolly pine r... 99 2e-043
gb|CF666147.1|CF666147 RTCNT1_21_D10.b1_A029 Root control P... 99 2e-043
gb|DN445836.1|DN445836 EST941635 Sequencing ESTs from loblo... 117 2e-043
gb|DN448237.1|DN448237 EST944036 Sequencing ESTs from loblo... 117 2e-043
gb|DR743851.1|DR743851 RTCU1_18_C02.g1_A029 Roots plus adde... 99 2e-043
gb|CO159881.1|CO159881 FLD1_16_D07.g1_A029 Root flooded Pin... 99 3e-043
gb|CO167926.1|CO167926 FLD1_72_E01.b1_A029 Root flooded Pin... 99 3e-043
gb|CO162047.1|CO162047 FLD1_32_H06.g1_A029 Root flooded Pin... 99 3e-043
gb|DR090763.1|DR090763 RTAL1_17_E09.b1_A029 Roots plus adde... 99 3e-043
gb|DR164133.1|DR164133 RTFE1_47_B07.b1_A029 Roots minus iro... 99 3e-043
gb|DR018814.1|DR018814 STRS1_25_H01.g1_A034 Shoot tip pitch... 99 3e-043
gb|DR116890.1|DR116890 RTMG1_3_A03.g1_A029 Roots minus magn... 99 3e-043
gb|DR020602.1|DR020602 STRS1_38_C09.b1_A034 Shoot tip pitch... 99 3e-043
gb|CO161815.1|CO161815 FLD1_31_G10.b1_A029 Root flooded Pin... 99 3e-043
gb|AW010566.1|AW010566 ST08C07 Pine TriplEx shoot tip libra... 117 5e-043
gb|CO162301.1|CO162301 FLD1_34_A09.g1_A029 Root flooded Pin... 102 7e-043
gb|BQ697406.1|BQ697406 NXPV_053_G02_F NXPV (Nsf Xylem Plani... 113 7e-043
gb|CO170459.1|CO170459 NDL1_14_A01.g1_A029 Needles control ... 90 8e-043
gb|DR025478.1|DR025478 STRS1_71_G10.g1_A034 Shoot tip pitch... 97 8e-043
gb|CF391061.1|CF391061 RTDR3_3_G05.g1_A022 Loblolly pine ro... 117 9e-043
gb|CX715574.1|CX715574 RTPQ1_35_C04.b1_A032 Roots treated w... 157 1e-042
gb|CF401427.1|CF401427 RTWW1_12_H02.g1_A015 Well-watered lo... 99 1e-042
gb|CX646721.1|CX646721 COLD1_11_C12.b1_A029 Root cold Pinus... 96 1e-042
gb|CF400007.1|CF400007 RTWW1_2_H04.g1_A015 Well-watered lob... 99 1e-042
gb|DR100891.1|DR100891 STRR1_69_C06.b1_A033 Stem Response R... 121 3e-042
gb|BE187050.1|BE187050 NXNV_158_B11_F Nsf Xylem Normal wood... 115 3e-042
gb|AA556765.1|AA556765 607 Loblolly pine NA Pinus taeda cDN... 114 4e-042
gb|CF386931.1|CF386931 RTDR1_9_F05.g1_A015 Loblolly pine ro... 99 4e-042
gb|DR692851.1|DR692851 EST1082939 Normalized pine embryo li... 99 8e-042
gb|CO160935.1|CO160935 FLD1_25_C05.g1_A029 Root flooded Pin... 123 9e-042
gb|CO161892.1|CO161892 FLD1_31_G10.g1_A029 Root flooded Pin... 93 1e-041
gb|DN459373.1|DN459373 EST955172 Sequencing ESTs from loblo... 117 2e-041
gb|DR019876.1|DR019876 STRS1_33_C04.b1_A034 Shoot tip pitch... 170 2e-041
gb|CF477066.1|CF477066 RTWW3_5_D03.g1_A022 Well-watered lob... 142 2e-041
gb|CO169502.1|CO169502 NDL1_7_B06.g1_A029 Needles control P... 142 3e-041
gb|CF400992.1|CF400992 RTWW1_9_E03.g1_A015 Well-watered lob... 91 4e-041
gb|DR013996.1|DR013996 HEAT1_22_F11.g1_A029 Root at 37 C fo... 142 4e-041
gb|CO164078.1|CO164078 FLD1_45_E01.g1_A029 Root flooded Pin... 91 4e-041
gb|CO200116.1|CO200116 GEO2_5_B10.g1_A032 Root gravitropism... 142 4e-041
gb|CF473877.1|CF473877 RTWW2_19_D05.g1_A021 Well-watered lo... 91 4e-041
gb|CO200532.1|CO200532 GEO2_8_B04.b1_A032 Root gravitropism... 91 5e-041
gb|CV034724.1|CV034724 RTNACL1_11_D10.b1_A029 Roots plus ad... 93 6e-041
gb|DR015826.1|DR015826 STRS1_5_H03.g1_A034 Shoot tip pitch ... 142 7e-041
gb|CR393168.1|CR393168 CR393168 RN Pinus pinaster cDNA clon... 147 7e-041
gb|DR080761.1|DR080761 RTFEPL1_25_C02.b1_A029 Roots plus ad... 93 8e-041
gb|DR178812.1|DR178812 RTMNUT1_14_D10.b1_A029 Roots minus m... 123 1e-040
gb|AA739982.1|AA739982 747 PtIFG2 Pinus taeda cDNA clone 91... 88 1e-040
gb|DR164061.1|DR164061 RTFE1_46_C08.g1_A029 Roots minus iro... 142 1e-040
gb|CF673203.1|CF673203 RTCNT1_76_H06.g1_A029 Root control P... 89 1e-040
gb|CO361817.1|CO361817 NDL2_7_F10.b1_A029 Needles control 2... 88 2e-040
gb|BG039980.1|BG039980 NXSI_104_C09_F NXSI (Nsf Xylem Side ... 114 3e-040
gb|CF399912.1|CF399912 RTWW1_1_H09.g1_A015 Well-watered lob... 99 4e-040
gb|CV035977.1|CV035977 RTNACL1_43_F11.g1_A029 Roots plus ad... 93 4e-040
gb|BQ655076.1|BQ655076 NXRV090_A01_F NXRV (Nsf Xylem Root w... 117 5e-040
gb|DR160377.1|DR160377 RTFE1_5_D06.g1_A029 Roots minus iron... 99 7e-040
gb|DR089903.1|DR089903 RTAL1_11_B09.g1_A029 Roots plus adde... 121 9e-040
gb|DR117863.1|DR117863 RTMG1_9_E04.g1_A029 Roots minus magn... 116 9e-040
gb|CV035599.1|CV035599 RTNACL1_41_D03.b1_A029 Roots plus ad... 137 9e-040
gb|CV034324.1|CV034324 RTNACL1_40_D08.b1_A029 Roots plus ad... 91 9e-040
gb|DR094715.1|DR094715 STRR1_16_G02.b1_A033 Stem Response R... 86 1e-039
gb|DR166034.1|DR166034 RTPHOS1_8_H04.g1_A029 Roots minus ph... 135 2e-039
gb|DR384257.1|DR384257 RTHG1_1_C08.b1_A029 Roots plus added... 83 8e-039
gb|DR161078.1|DR161078 RTFE1_9_E10.g1_A029 Roots minus iron... 83 1e-038
gb|DR178680.1|DR178680 RTMNUT1_13_G02.b1_A029 Roots minus m... 117 1e-038
gb|CV035910.1|CV035910 RTNACL1_43_G04.b1_A029 Roots plus ad... 117 1e-038
gb|CF402590.1|CF402590 RTWW1_21_H03.g1_A015 Well-watered lo... 99 1e-038
gb|DR167978.1|DR167978 RTPHOS1_22_A01.g1_A029 Roots minus p... 114 2e-038
gb|DR116570.1|DR116570 RTMG1_1_H02.b1_A029 Roots minus magn... 99 2e-038
gb|CO200618.1|CO200618 GEO2_8_B09.g1_A032 Root gravitropism... 133 3e-038
gb|DR093689.1|DR093689 STRR1_9_G02.g1_A033 Stem Response Re... 90 3e-038
gb|CO170245.1|CO170245 NDL1_12_E03.g1_A029 Needles control ... 90 3e-038
gb|CO366886.1|CO366886 RTK1_30_F07.g1_A029 Roots minus pota... 86 3e-038
gb|CF385591.1|CF385591 RTDR1_4_A03.g1_A015 Loblolly pine ro... 81 3e-038
gb|BX681068.1|BX681068 BX681068 RS Pinus pinaster cDNA clon... 122 3e-038
gb|CF401012.1|CF401012 RTWW1_9_A07.g1_A015 Well-watered lob... 81 3e-038
gb|CV033233.1|CV033233 RTNACL1_33_E06.b1_A029 Roots plus ad... 90 4e-038
gb|DR070564.1|DR070564 RTDK1_14_D03.b1_A029 Roots, dark Pin... 123 4e-038
gb|CO167792.1|CO167792 FLD1_71_E11.b1_A029 Root flooded Pin... 121 4e-038
gb|CX650020.1|CX650020 COLD1_43_B02.b1_A029 Root cold Pinus... 81 5e-038
gb|DR023668.1|DR023668 STRS1_59_F05.b1_A034 Shoot tip pitch... 123 6e-038
gb|DR022761.1|DR022761 STRS1_53_G05.b1_A034 Shoot tip pitch... 123 6e-038
gb|DR022528.1|DR022528 STRS1_51_E12.g1_A034 Shoot tip pitch... 114 7e-038
gb|CX651221.1|CX651221 COLD1_51_A06.b1_A029 Root cold Pinus... 90 7e-038
gb|DR177967.1|DR177967 RTMNUT1_8_A12.g1_A029 Roots minus mi... 117 1e-037
gb|CF395283.1|CF395283 RTDS2_10_C06.g1_A021 Drought-stresse... 114 1e-037
gb|AW497816.1|AW497816 PC02F02 Pine TriplEx pollen cone lib... 114 1e-037
gb|DR081315.1|DR081315 RTFEPL1_28_F11.g1_A029 Roots plus ad... 99 1e-037
gb|DR690196.1|DR690196 EST1080282 Normalized pine embryo li... 114 1e-037
gb|BE643834.1|BE643834 NXCI_047_H01_F NXCI (Nsf Xylem Compr... 110 1e-037
gb|DR178758.1|DR178758 RTMNUT1_13_G02.g1_A029 Roots minus m... 121 1e-037
gb|DR081511.1|DR081511 RTFEPL1_30_E06.b1_A029 Roots plus ad... 93 1e-037
gb|CF475159.1|CF475159 RTWW2_14_B11.b1_A021 Well-watered lo... 90 2e-037
gb|CO365014.1|CO365014 RTK1_23_D06.b1_A029 Roots minus pota... 90 2e-037
gb|CF397644.1|CF397644 RTDS3_4_D06.g1_A022 Drought-stressed... 90 2e-037
gb|BQ700348.1|BQ700348 NXRV104_D06_F NXRV (Nsf Xylem Root w... 111 4e-037
gb|DR094190.1|DR094190 STRR1_13_B09.b1_A033 Stem Response R... 76 6e-037
gb|CO199518.1|CO199518 GEO2_1_F10.g1_A032 Root gravitropism... 123 7e-037
gb|CO165091.1|CO165091 FLD1_52_G05.b1_A029 Root flooded Pin... 123 1e-036
gb|CO367001.1|CO367001 RTK1_31_C02.g1_A029 Roots minus pota... 127 1e-036
gb|CO370214.1|CO370214 RTK1_66_G02.b1_A029 Roots minus pota... 121 2e-036
gb|BX251939.1|BX251939 BX251939 Pinus pinaster differenciat... 113 4e-036
gb|CO159815.1|CO159815 FLD1_16_D07.b1_A029 Root flooded Pin... 73 5e-036
gb|CO167710.1|CO167710 FLD1_70_E03.g1_A029 Root flooded Pin... 117 6e-036
gb|AL751298.1|AL751298 AL751298 RS Pinus pinaster cDNA clon... 127 8e-036
gb|CF475200.1|CF475200 RTWW2_14_B11.g1_A021 Well-watered lo... 113 8e-036
gb|CO365224.1|CO365224 RTK1_24_H11.b1_A029 Roots minus pota... 90 2e-035
gb|DR011031.1|DR011031 HEAT1_2_H09.g1_A029 Root at 37 C for... 70 4e-035
gb|DR048415.1|DR048415 RTBOR1_8_F09.g2_A029 Roots plus adde... 70 5e-035
gb|DR681903.1|DR681903 EST1071978 Normalized pine embryo li... 70 5e-035
gb|DR069127.1|DR069127 RTDK1_5_C09.b1_A029 Roots, dark Pinu... 70 8e-035
gb|DR020619.1|DR020619 STRS1_38_E06.b1_A034 Shoot tip pitch... 123 1e-034
gb|CO167274.1|CO167274 FLD1_68_A07.b1_A029 Root flooded Pin... 123 1e-034
gb|CO369007.1|CO369007 RTK1_44_G12.b1_A029 Roots minus pota... 123 1e-034
gb|CF387946.1|CF387946 RTDR1_17_G09.b1_A015 Loblolly pine r... 99 1e-034
gb|CF399156.1|CF399156 RTDS3_9_D08.g1_A022 Drought-stressed... 99 2e-034
gb|CO175311.1|CO175311 NDL1_53_G09.g1_A029 Needles control ... 99 2e-034
gb|CF400761.1|CF400761 RTWW1_7_G05.g1_A015 Well-watered lob... 99 2e-034
gb|CX648291.1|CX648291 COLD1_27_E12.g1_A029 Root cold Pinus... 77 3e-034
gb|CO161095.1|CO161095 FLD1_26_D04.g1_A029 Root flooded Pin... 99 3e-034
gb|DR163900.1|DR163900 RTFE1_45_D05.g1_A029 Roots minus iro... 99 3e-034
gb|CV147587.1|CV147587 EST858796 Sequencing ESTs from loblo... 99 3e-034
gb|DN448128.1|DN448128 EST943927 Sequencing ESTs from loblo... 99 4e-034
gb|DR116829.1|DR116829 RTMG1_3_B10.b1_A029 Roots minus magn... 67 6e-034
gb|BX253868.1|BX253868 BX253868 Pinus pinaster differenciat... 96 6e-034
gb|CF663933.1|CF663933 RTCNT1_6_C10.b1_A029 Root control Pi... 121 7e-034
gb|DR049314.1|DR049314 RTBOR1_15_H04.b1_A029 Roots plus add... 121 7e-034
gb|CO167122.1|CO167122 FLD1_67_A10.b1_A029 Root flooded Pin... 66 1e-033
gb|DR013603.1|DR013603 HEAT1_20_G08.b1_A029 Root at 37 C fo... 123 1e-033
gb|BG625864.1|BG625864 NXPV_066_H12_F NXPV (Nsf Xylem Plani... 94 1e-033
gb|CO168007.1|CO168007 FLD1_72_E01.g1_A029 Root flooded Pin... 99 1e-033
gb|DR061039.1|DR061039 RTNIT1_31_E02.g1_A029 Roots minus ni... 99 2e-033
gb|DR684249.1|DR684249 EST1074326 Normalized pine embryo li... 144 2e-033
gb|CV146973.1|CV146973 EST858182 Sequencing ESTs from loblo... 99 2e-033
gb|DR014440.1|DR014440 HEAT1_49_B08.g1_A029 Root at 37 C fo... 99 2e-033
gb|CO364616.1|CO364616 RTK1_16_F08.g1_A029 Roots minus pota... 99 2e-033
gb|CO162026.1|CO162026 FLD1_32_F01.g1_A029 Root flooded Pin... 99 2e-033
gb|CO365458.1|CO365458 RTK1_17_E03.b1_A029 Roots minus pota... 99 2e-033
gb|CO367769.1|CO367769 RTK1_36_B08.g1_A029 Roots minus pota... 99 2e-033
gb|CX646797.1|CX646797 COLD1_11_C12.g1_A029 Root cold Pinus... 99 2e-033
gb|CX650094.1|CX650094 COLD1_43_B02.g1_A029 Root cold Pinus... 99 2e-033
gb|CO167190.1|CO167190 FLD1_67_A10.g1_A029 Root flooded Pin... 99 2e-033
gb|DR386901.1|DR386901 RTHG1_18_D06.b1_A029 Roots plus adde... 99 2e-033
gb|CO161591.1|CO161591 FLD1_29_H08.g1_A029 Root flooded Pin... 99 2e-033
gb|CV031822.1|CV031822 RTNACL1_3_H11.g1_A029 Roots plus add... 99 2e-033
gb|DR023065.1|DR023065 STRS1_55_F06.b1_A034 Shoot tip pitch... 99 2e-033
gb|DR069204.1|DR069204 RTDK1_5_C09.g1_A029 Roots, dark Pinu... 99 2e-033
gb|DR164207.1|DR164207 RTFE1_47_B07.g1_A029 Roots minus iro... 99 2e-033
gb|DR179218.1|DR179218 RTMNUT1_16_F04.g1_A029 Roots minus m... 99 2e-033
gb|DR687693.1|DR687693 EST1077775 Normalized pine embryo li... 99 2e-033
gb|CO200614.1|CO200614 GEO2_8_B04.g1_A032 Root gravitropism... 99 2e-033
gb|CO366268.1|CO366268 RTK1_26_G11.g1_A029 Roots minus pota... 99 2e-033
gb|DR384336.1|DR384336 RTHG1_1_C08.g1_A029 Roots plus added... 99 2e-033
gb|CX646103.1|CX646103 COLD1_7_G07.b1_A029 Root cold Pinus ... 99 2e-033
gb|CF400470.1|CF400470 RTWW1_5_F09.g1_A015 Well-watered lob... 99 2e-033
gb|DR098132.1|DR098132 STRR1_39_G04.b1_A033 Stem Response R... 99 2e-033
gb|DR384598.1|DR384598 RTHG1_3_F11.b1_A029 Roots plus added... 99 2e-033
gb|CO160543.1|CO160543 FLD1_21_F05.g1_A029 Root flooded Pin... 99 2e-033
gb|CO159233.1|CO159233 FLD1_12_G07.b1_A029 Root flooded Pin... 99 2e-033
gb|DR050145.1|DR050145 RTBOR1_21_C06.g1_A029 Roots plus add... 99 2e-033
gb|CV031759.1|CV031759 RTNACL1_3_B11.g1_A029 Roots plus add... 99 2e-033
gb|DR384883.1|DR384883 RTHG1_5_E10.b1_A029 Roots plus added... 99 2e-033
gb|CF387269.1|CF387269 RTDR1_11_F10.g1_A015 Loblolly pine r... 99 2e-033
gb|CF402173.1|CF402173 RTWW1_20_D10.g1_A015 Well-watered lo... 99 2e-033
gb|CO363095.1|CO363095 RTK1_7_D04.g1_A029 Roots minus potas... 99 2e-033
gb|DR176858.1|DR176858 RTMNUT1_1_A07.g1_A029 Roots minus mi... 99 2e-033
gb|DR385339.1|DR385339 RTHG1_8_C09.b1_A029 Roots plus added... 99 2e-033
gb|CF386751.1|CF386751 RTDR1_16_F12.g1_A015 Loblolly pine r... 99 2e-033
gb|DT624436.1|DT624436 EST1158711 Sequencing ESTs from lobl... 99 2e-033
gb|CF387887.1|CF387887 RTDR1_18_F01.g1_A015 Loblolly pine r... 99 2e-033
gb|DR161431.1|DR161431 RTFE1_11_F05.g1_A029 Roots minus iro... 99 2e-033
gb|CO361896.1|CO361896 NDL2_7_F10.g1_A029 Needles control 2... 99 2e-033
gb|CF399876.1|CF399876 RTWW1_1_F06.g1_A015 Well-watered lob... 99 2e-033
gb|CF400875.1|CF400875 RTWW1_8_C07.g1_A015 Well-watered lob... 99 2e-033
gb|DR179193.1|DR179193 RTMNUT1_16_D01.g1_A029 Roots minus m... 99 2e-033
gb|CF668927.1|CF668927 RTCNT1_39_B09.g1_A029 Root control P... 99 2e-033
gb|CO169248.1|CO169248 NDL1_5_E11.g1_A029 Needles control P... 99 2e-033
gb|DR164991.1|DR164991 RTPHOS1_1_E07.g1_A029 Roots minus ph... 99 2e-033
gb|DR388656.1|DR388656 RTHG1_29_D09.g1_A029 Roots plus adde... 99 2e-033
gb|CO367059.1|CO367059 RTK1_31_H08.g1_A029 Roots minus pota... 99 2e-033
gb|CF401876.1|CF401876 RTWW1_15_G06.g1_A015 Well-watered lo... 99 2e-033
gb|DR109633.1|DR109633 RTS1_3_D09.g1_A029 Roots minus sulfu... 99 2e-033
gb|CO198482.1|CO198482 GEO1_14_B04.b1_A029 Root gravitropis... 99 2e-033
gb|CO158677.1|CO158677 FLD1_8_B02.g1_A029 Root flooded Pinu... 99 2e-033
gb|CF474177.1|CF474177 RTWW2_17_D01.b1_A021 Well-watered lo... 99 2e-033
gb|CO158684.1|CO158684 FLD1_8_B12.g1_A029 Root flooded Pinu... 99 2e-033
gb|CF402351.1|CF402351 RTWW1_19_D06.g1_A015 Well-watered lo... 99 2e-033
gb|CF673138.1|CF673138 RTCNT1_76_H06.b1_A029 Root control P... 99 2e-033
gb|CF471005.1|CF471005 RTDS1_15_C12.g1_A015 Drought-stresse... 99 2e-033
gb|CO176113.1|CO176113 NDL1_59_G04.g1_A029 Needles control ... 99 2e-033
gb|CF400340.1|CF400340 RTWW1_4_E04.g1_A015 Well-watered lob... 99 2e-033
gb|CF476609.1|CF476609 RTWW3_2_B05.g1_A022 Well-watered lob... 99 2e-033
gb|CF400987.1|CF400987 RTWW1_9_A07.b1_A015 Well-watered lob... 99 2e-033
gb|CO200015.1|CO200015 GEO2_4_H12.g1_A032 Root gravitropism... 99 2e-033
gb|CV034928.1|CV034928 RTNACL1_12_C01.g1_A029 Roots plus ad... 99 2e-033
gb|CX646040.1|CX646040 COLD1_6_H10.g1_A029 Root cold Pinus ... 99 2e-033
gb|CF399930.1|CF399930 RTWW1_2_C09.b1_A015 Well-watered lob... 99 2e-033
gb|CF400426.1|CF400426 RTWW1_5_H06.b1_A015 Well-watered lob... 99 2e-033
gb|CF669854.1|CF669854 RTCNT1_46_B01.g1_A029 Root control P... 99 2e-033
gb|DR071220.1|DR071220 RTDK1_18_A06.g1_A029 Roots, dark Pin... 99 2e-033
gb|DR102267.1|DR102267 STRR1_79_F04.g1_A033 Stem Response R... 100 2e-033
gb|BM428592.1|BM428592 NXRV_019_A07_F NXRV (Nsf Xylem Root ... 107 3e-033
gb|DR095647.1|DR095647 STRR1_22_D10.g1_A033 Stem Response R... 98 3e-033
gb|DR176926.1|DR176926 RTMNUT1_1_H07.g1_A029 Roots minus mi... 98 3e-033
gb|BX251512.1|BX251512 BX251512 Pinus pinaster differenciat... 113 3e-033
gb|CF400190.1|CF400190 RTWW1_3_A07.g1_A015 Well-watered lob... 99 4e-033
gb|DR060587.1|DR060587 RTNIT1_28_F06.g1_A029 Roots minus ni... 99 4e-033
gb|CF672243.1|CF672243 RTCNT1_62_G04.b1_A029 Root control P... 142 5e-033
gb|DR384651.1|DR384651 RTHG1_3_D08.g1_A029 Roots plus added... 142 6e-033
gb|CF395300.1|CF395300 RTDS2_10_A10.g1_A021 Drought-stresse... 97 6e-033
gb|CF388941.1|CF388941 RTDR2_16_G01.g1_A021 Loblolly pine r... 97 6e-033
gb|CO171152.1|CO171152 NDL1_19_B11.g1_A029 Needles control ... 123 6e-033
gb|CF390729.1|CF390729 RTDR2_17_C10.g1_A021 Loblolly pine r... 142 6e-033
gb|CF394874.1|CF394874 RTDS2_8_F11.b1_A021 Drought-stressed... 142 6e-033
gb|CF666853.1|CF666853 RTCNT1_26_C11.g1_A029 Root control P... 142 6e-033
gb|CO365570.1|CO365570 RTK1_17_G09.g1_A029 Roots minus pota... 142 6e-033
gb|CO368712.1|CO368712 RTK1_42_G10.b1_A029 Roots minus pota... 142 6e-033
gb|CV032025.1|CV032025 RTNACL1_5_F01.b1_A029 Roots plus add... 142 6e-033
gb|CV035668.1|CV035668 RTNACL1_41_D03.g1_A029 Roots plus ad... 142 6e-033
gb|DR025460.1|DR025460 STRS1_71_F03.g1_A034 Shoot tip pitch... 142 6e-033
gb|DR079381.1|DR079381 RTFEPL1_10_H09.g1_A029 Roots plus ad... 142 6e-033
gb|DR097699.1|DR097699 STRR1_36_A09.g3_A033 Stem Response R... 142 6e-033
gb|DR097710.1|DR097710 STRR1_36_B09.g3_A033 Stem Response R... 142 6e-033
gb|DR167430.1|DR167430 RTPHOS1_18_F05.g1_A029 Roots minus p... 142 6e-033
gb|DR692266.1|DR692266 EST1082354 Normalized pine embryo li... 142 6e-033
gb|CX650820.1|CX650820 COLD1_48_G09.b1_A029 Root cold Pinus... 121 8e-033
gb|CO159863.1|CO159863 FLD1_16_B08.g1_A029 Root flooded Pin... 141 8e-033
gb|DR048293.1|DR048293 RTBOR1_7_F12.g2_A029 Roots plus adde... 65 1e-032
gb|CF479403.1|CF479403 RTWW3_23_A03.g1_A022 Well-watered lo... 96 2e-032
gb|DR050120.1|DR050120 RTBOR1_21_H12.b1_A029 Roots plus add... 123 2e-032
gb|BQ698675.1|BQ698675 NXPV_074_G10_F NXPV (Nsf Xylem Plani... 99 2e-032
gb|CF672747.1|CF672747 RTCNT1_73_E03.g1_A029 Root control P... 140 2e-032
gb|DR180920.1|DR180920 RTMNUT1_35_E05.g1_A029 Roots minus m... 140 2e-032
gb|CF387393.1|CF387393 RTDR1_12_A02.g1_A015 Loblolly pine r... 99 2e-032
gb|BX682808.1|BX682808 BX682808 Pinus pinaster differenciat... 127 2e-032
gb|CV035389.1|CV035389 RTNACL1_15_E11.g1_A029 Roots plus ad... 65 2e-032
gb|DR110981.1|DR110981 RTS1_14_B02.g1_A029 Roots minus sulf... 65 3e-032
gb|DR081232.1|DR081232 RTFEPL1_28_F11.b1_A029 Roots plus ad... 65 3e-032
gb|CO174493.1|CO174493 NDL1_44_H02.b1_A029 Needles control ... 99 3e-032
gb|CO369899.1|CO369899 RTK1_55_B11.b1_A029 Roots minus pota... 99 3e-032
gb|CF385986.1|CF385986 RTDR1_7_G04.g1_A015 Loblolly pine ro... 99 3e-032
gb|CF666587.1|CF666587 RTCNT1_24_A05.g1_A029 Root control P... 99 3e-032
gb|CF389090.1|CF389090 RTDR2_13_E01.g1_A021 Loblolly pine r... 94 3e-032
gb|DR059074.1|DR059074 RTNIT1_15_C03.g1_A029 Roots minus ni... 95 4e-032
gb|CF399165.1|CF399165 RTDS3_9_B08.g1_A022 Drought-stressed... 111 5e-032
gb|CV034393.1|CV034393 RTNACL1_40_D08.g1_A029 Roots plus ad... 99 5e-032
gb|CF670990.1|CF670990 RTCNT1_54_A05.b1_A029 Root control P... 99 5e-032
gb|CO176188.1|CO176188 NDL1_60_H07.b1_A029 Needles control ... 94 5e-032
gb|DR692435.1|DR692435 EST1082523 Normalized pine embryo li... 97 7e-032
gb|CF473266.1|CF473266 RTWW2_1_E11.g1_A021 Well-watered lob... 97 7e-032
gb|DR176916.1|DR176916 RTMNUT1_1_G07.g1_A029 Roots minus mi... 65 1e-031
gb|BG275743.1|BG275743 NXSI_145_E03_F NXSI (Nsf Xylem Side ... 137 1e-031
gb|CX712796.1|CX712796 RTPQ1_4_G10.g2_A032 Roots treated wi... 65 2e-031
gb|CO158703.1|CO158703 FLD1_8_E01.g1_A029 Root flooded Pinu... 135 5e-031
gb|BX249419.1|BX249419 BX249419 Pinus pinaster differenciat... 113 9e-031
gb|AW226384.1|AW226384 ST81F12 Pine TriplEx shoot tip libra... 134 1e-030
gb|DR052888.1|DR052888 RTCA1_7_C02.g1_A029 Roots minus calc... 124 1e-030
gb|DR118810.1|DR118810 RTMG1_19_G10.b1_A029 Roots minus mag... 89 1e-030
gb|BQ699002.1|BQ699002 NXRV118_C01_F NXRV (Nsf Xylem Root w... 93 1e-030
gb|CF391882.1|CF391882 RTDR3_10_B12.g1_A022 Loblolly pine r... 94 1e-030
gb|BE458111.1|BE458111 NXCI_008_F07_F NXCI (Nsf Xylem Compr... 123 2e-030
gb|BQ696527.1|BQ696527 NXPV_042_C09_F NXPV (Nsf Xylem Plani... 99 2e-030
gb|CO362644.1|CO362644 RTK1_5_A10.b1_A029 Roots minus potas... 99 3e-030
gb|DR051028.1|DR051028 RTBOR1_27_E11.b1_A029 Roots plus add... 73 3e-030
gb|CX715454.1|CX715454 RTPQ1_34_F09.b1_A032 Roots treated w... 94 4e-030
gb|AW010852.1|AW010852 ST14H04 Pine TriplEx shoot tip libra... 91 4e-030
gb|DR010957.1|DR010957 HEAT1_2_H09.b1_A029 Root at 37 C for... 99 6e-030
gb|CO368769.1|CO368769 RTK1_42_E07.g1_A029 Roots minus pota... 99 6e-030
gb|CF472614.1|CF472614 RTDS1_10_H01.g1_A015 Drought-stresse... 99 6e-030
gb|DR080819.1|DR080819 RTFEPL1_25_A05.g1_A029 Roots plus ad... 99 6e-030
gb|CF479379.1|CF479379 RTWW3_23_F07.g1_A022 Well-watered lo... 99 6e-030
gb|CF385185.1|CF385185 RTDR1_2_E07.g1_A015 Loblolly pine ro... 99 6e-030
gb|CF385249.1|CF385249 RTDR1_2_G06.g1_A015 Loblolly pine ro... 99 6e-030
gb|BX255292.1|BX255292 BX255292 Pinus pinaster differenciat... 99 6e-030
gb|CX647384.1|CX647384 COLD1_16_A08.b1_A029 Root cold Pinus... 99 2e-029
gb|CF395992.1|CF395992 RTDS2_20_F05.g1_A021 Drought-stresse... 97 2e-029
gb|DR071245.1|DR071245 RTDK1_18_D03.g1_A029 Roots, dark Pin... 116 2e-029
gb|BQ699231.1|BQ699231 NXRV121_B03_F NXRV (Nsf Xylem Root w... 119 2e-029
gb|BG318325.1|BG318325 NXPV_012_C08_F NXPV (Nsf Xylem Plani... 99 3e-029
gb|DR052886.1|DR052886 RTCA1_7_B12.g1_A029 Roots minus calc... 66 3e-029
gb|DT635911.1|DT635911 EST1150842 Normalized pine embryo li... 114 4e-029
gb|DR071907.1|DR071907 RTDK1_22_G09.g1_A029 Roots, dark Pin... 121 4e-029
gb|DR013600.1|DR013600 HEAT1_20_G05.b1_A029 Root at 37 C fo... 84 5e-029
gb|CO365350.1|CO365350 RTK1_25_D10.b1_A029 Roots minus pota... 84 7e-029
gb|DR116571.1|DR116571 RTMG1_1_H03.b1_A029 Roots minus magn... 96 7e-029
gb|CO176263.1|CO176263 NDL1_60_H07.g1_A029 Needles control ... 90 1e-028
gb|DR060416.1|DR060416 RTNIT1_27_E05.g1_A029 Roots minus ni... 103 1e-028
gb|DR118296.1|DR118296 RTMG1_12_H11.b1_A029 Roots minus mag... 121 3e-028
gb|BX249878.1|BX249878 BX249878 Pinus pinaster differenciat... 113 7e-028
gb|DR089180.1|DR089180 RTAL1_7_B08.b1_A029 Roots plus added... 65 1e-027
gb|DN614689.1|DN614689 EST967739 Subtracted pine embryo lib... 93 1e-027
gb|BM428593.1|BM428593 NXRV_019_A08_F NXRV (Nsf Xylem Root ... 88 1e-027
gb|AW985324.1|AW985324 NXNV_135_H04_F Nsf Xylem Normal wood... 123 2e-027
gb|CF398375.1|CF398375 RTDS3_12_E06.b1_A022 Drought-stresse... 123 2e-027
gb|CO171100.1|CO171100 NDL1_19_B11.b1_A029 Needles control ... 123 2e-027
gb|CO198528.1|CO198528 GEO1_14_H05.b1_A029 Root gravitropis... 123 2e-027
gb|CO201321.1|CO201321 RTCNT2_5_B04.b1_A029 Root control 2 ... 123 2e-027
gb|CX712540.1|CX712540 RTPQ1_3_D08.b2_A032 Roots treated wi... 123 2e-027
gb|DR012805.1|DR012805 HEAT1_15_D05.b1_A029 Root at 37 C fo... 123 2e-027
gb|DR015048.1|DR015048 STRS1_1_E04.b1_A034 Shoot tip pitch ... 123 2e-027
gb|DR017559.1|DR017559 STRS1_17_C06.b1_A034 Shoot tip pitch... 123 2e-027
gb|DR022838.1|DR022838 STRS1_53_G05.g1_A034 Shoot tip pitch... 123 2e-027
gb|DR093933.1|DR093933 STRR1_11_H02.b1_A033 Stem Response R... 123 2e-027
gb|BX248788.1|BX248788 BX248788 Pinus pinaster differenciat... 75 5e-027
gb|BE123616.1|BE123616 NXNV_146_E09_F Nsf Xylem Normal wood... 122 5e-027
gb|DR014058.1|DR014058 HEAT1_23_D09.b1_A029 Root at 37 C fo... 122 7e-027
gb|CF390361.1|CF390361 RTDR2_19_H08.b1_A021 Loblolly pine r... 121 1e-026
gb|CF390820.1|CF390820 RTDR3_2_D03.b1_A022 Loblolly pine ro... 121 1e-026
gb|CF392344.1|CF392344 RTDR3_7_H01.b1_A022 Loblolly pine ro... 121 1e-026
gb|CF393883.1|CF393883 RTDS2_1_G06.g1_A021 Drought-stressed... 121 1e-026
gb|CF393886.1|CF393886 RTDS2_1_F11.g1_A021 Drought-stressed... 121 1e-026
gb|CF398899.1|CF398899 RTDS3_11_H09.b1_A022 Drought-stresse... 121 1e-026
gb|CF402528.1|CF402528 RTWW1_21_D01.b1_A015 Well-watered lo... 121 1e-026
gb|CF402812.1|CF402812 RTWW1_23_E10.b1_A015 Well-watered lo... 121 1e-026
gb|CF665976.1|CF665976 RTCNT1_19_G10.g1_A029 Root control P... 121 1e-026
gb|CF668350.1|CF668350 RTCNT1_36_A09.b1_A029 Root control P... 121 1e-026
gb|CF668906.1|CF668906 RTCNT1_39_H10.b1_A029 Root control P... 121 1e-026
gb|CF671073.1|CF671073 RTCNT1_54_B11.g1_A029 Root control P... 121 1e-026
gb|CF671301.1|CF671301 RTCNT1_56_D09.b1_A029 Root control P... 121 1e-026
gb|CO158632.1|CO158632 FLD1_8_E01.b1_A029 Root flooded Pinu... 121 1e-026
gb|CX651417.1|CX651417 COLD1_52_F07.b1_A029 Root cold Pinus... 121 1e-026
gb|DR011539.1|DR011539 HEAT1_6_H03.b1_A029 Root at 37 C for... 121 1e-026
gb|DR068913.1|DR068913 RTDK1_3_D07.g1_A029 Roots, dark Pinu... 121 1e-026
gb|DR177887.1|DR177887 RTMNUT1_8_A12.b1_A029 Roots minus mi... 121 1e-026
gb|DR179629.1|DR179629 RTMNUT1_23_G07.b2_A029 Roots minus m... 121 1e-026
gb|AW042576.1|AW042576 ST23E10 Pine TriplEx shoot tip libra... 70 2e-026
gb|CO161953.1|CO161953 FLD1_32_F01.b1_A029 Root flooded Pin... 65 2e-026
gb|CF396190.1|CF396190 RTDS2_15_C09.g1_A021 Drought-stresse... 65 2e-026
gb|AI812656.1|AI812656 17E5 Pine Lambda Zap Xylem library P... 70 2e-026
gb|CF397295.1|CF397295 RTDS3_2_E06.g1_A022 Drought-stressed... 65 2e-026
gb|DR388580.1|DR388580 RTHG1_29_D09.b1_A029 Roots plus adde... 65 2e-026
gb|DR178529.1|DR178529 RTMNUT1_12_H03.b1_A029 Roots minus m... 73 4e-026
gb|CO201222.1|CO201222 RTCNT2_4_H09.b1_A029 Root control 2 ... 93 4e-026
gb|CO160572.1|CO160572 FLD1_22_B05.b1_A029 Root flooded Pin... 82 1e-025
gb|DR118751.1|DR118751 RTMG1_19_A05.b1_A029 Roots minus mag... 117 1e-025
gb|CO363190.1|CO363190 RTK1_8_E03.b1_A029 Roots minus potas... 66 1e-025
gb|DR687450.1|DR687450 EST1077532 Normalized pine embryo li... 99 2e-025
gb|CF470459.1|CF470459 RTDS1_17_D04.g1_A015 Drought-stresse... 99 2e-025
gb|CO158833.1|CO158833 FLD1_9_C04.g1_A029 Root flooded Pinu... 99 2e-025
gb|DR020679.1|DR020679 STRS1_38_C09.g1_A034 Shoot tip pitch... 99 2e-025
gb|DR097876.1|DR097876 STRR1_37_D06.g1_A033 Stem Response R... 99 2e-025
gb|CF476936.1|CF476936 RTWW3_4_C09.g1_A022 Well-watered lob... 100 2e-025
gb|CF672639.1|CF672639 RTCNT1_73_B01.b1_A029 Root control P... 99 2e-025
gb|BG317615.1|BG317615 NXPV_003_G11_F NXPV (Nsf Xylem Plani... 100 2e-025
gb|DR058442.1|DR058442 RTNIT1_11_G04.g1_A029 Roots minus ni... 93 3e-025
gb|CF673169.1|CF673169 RTCNT1_76_D09.g1_A029 Root control P... 116 3e-025
gb|DR685349.1|DR685349 EST1075426 Normalized pine embryo li... 116 3e-025
gb|DT637279.1|DT637279 EST1152210 Normalized pine embryo li... 113 3e-025
gb|DR681904.1|DR681904 EST1071979 Normalized pine embryo li... 99 3e-025
gb|CV031741.1|CV031741 RTNACL1_3_A05.g1_A029 Roots plus add... 99 3e-025
gb|CF387656.1|CF387656 RTDR1_19_F09.b1_A015 Loblolly pine r... 99 3e-025
gb|CF474898.1|CF474898 RTWW2_8_D09.g1_A021 Well-watered lob... 99 3e-025
gb|DR019235.1|DR019235 STRS1_28_D09.g1_A034 Shoot tip pitch... 65 5e-025
gb|CX647053.1|CX647053 COLD1_13_E05.b1_A029 Root cold Pinus... 69 7e-025
gb|DR024838.1|DR024838 STRS1_67_F10.g1_A034 Shoot tip pitch... 86 1e-024
gb|CF475829.1|CF475829 RTWW2_15_A05.g1_A021 Well-watered lo... 65 1e-024
gb|CO369958.1|CO369958 RTK1_55_B11.g1_A029 Roots minus pota... 65 2e-024
gb|CO368690.1|CO368690 RTK1_42_E07.b1_A029 Roots minus pota... 65 2e-024
gb|CF471990.1|CF471990 RTDS1_7_G03.g1_A015 Drought-stressed... 89 2e-024
>gb|CO199449.1|CO199449 GEO2_1_F10.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_F10_A032 3', mRNA sequence
Length = 890
Score = 262 bits (566), Expect(4) = e-127
Identities = 98/139 (70%), Positives = 117/139 (84%)
Frame = -2 / -2
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF+FII NGG+D+E+DYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 670 NQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDE 491
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV+
Sbjct: 490 KSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVK 311
Query: 678 NSWGPKWGEAGYIRMERNV 622
NSWG WGE G+IR++RN+
Sbjct: 310 NSWGKSWGEEGFIRLQRNI 254
Score = 122 bits (261), Expect(4) = 7e-049
Identities = 52/132 (39%), Positives = 78/132 (59%)
Frame = +1 / +2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D + L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 254 NVPLQSDESLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPP 433
Query: 802 TGLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAP 981
G +GNANW HIF ID H+ GIFPV V + G V V++ + +
Sbjct: 434 AGFDGNANWLISRSLLQRFFIVFRHIFVVIDCHHMGIFPVSVT*SIVGRVGVILLAVKST 613
Query: 982 VLYDEIESGVHE 1017
++YD++ES +HE
Sbjct: 614 IVYDKLESVIHE 649
Score = 121 bits (259), Expect(4) = e-127
Identities = 44/60 (73%), Positives = 56/60 (93%)
Frame = -2 / -2
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E+LP+S+DWREKGAVAPVK+QG CGSCWAFS V++VE +NQIVTG++++LSEQELV+C T
Sbjct: 856 EDLPKSIDWREKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDT 677
Score = 85.8 bits (181), Expect(4) = e-127
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = -2 / -2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCC 370
VCD +SC +TCCC + F C WGCCP++ ATCC DH SCC
Sbjct: 136 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCC 2
Score = 57.4 bits (119), Expect(4) = 7e-049
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = +2 / +3
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLPH PW TGATAPF
Sbjct: 723 PVTI*LIPSTAATVENAQQLPHAPWSFTGATAPF 824
Score = 44.6 bits (91), Expect(4) = e-127
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2 / -2
Query: 621 NASTGKCGIAMMASYPTKKGAN 556
+ASTG CGIAM ASYP KKGAN
Sbjct: 250 DASTGICGIAMEASYPVKKGAN 185
Score = 37.3 bits (75), Expect(4) = 7e-049
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = +2 / +3
Query: 371 QQLA*SLQQVAPSTGQQPQTKQTFLKPNAQQQVL 472
QQL *S QQVA S GQQPQ Q K QQQVL
Sbjct: 3 QQL**SSQQVAESRGQQPQA*Q*PPKSYMQQQVL 104
Score = 34.5 bits (69), Expect(4) = 7e-049
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 189 APFFTG*DASIAIPQIPVEA 248
>gb|DR070649.1|DR070649 RTDK1_14_F01.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_14_F01_A029 5', mRNA sequence
Length = 847
Score = 266 bits (575), Expect(4) = e-121
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / +1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 202 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 381
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 382 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 561
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 562 NSWGKSWGEKGFIRLQRNIEGAS 630
Score = 119 bits (255), Expect(4) = e-121
Identities = 46/63 (73%), Positives = 53/63 (84%)
Frame = -2 / +1
Query: 1236 GAAEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVE 1057
G E LPESVDWREKGAVA VK+QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+
Sbjct: 7 GEGENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVD 186
Query: 1056 CST 1048
C T
Sbjct: 187 CDT 195
Score = 70.7 bits (148), Expect(5) = 9e-039
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 618 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 439
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 438 AGFDGNAN 415
Score = 65.7 bits (137), Expect(4) = e-121
Identities = 19/37 (51%), Positives = 23/37 (62%)
Frame = -2 / +1
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATC 394
VCD +SC +TCCC + F C WGCCP+ ATC
Sbjct: 736 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATC 846
Score = 56.5 bits (117), Expect(5) = 9e-039
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 366 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 223
Score = 51.0 bits (105), Expect(5) = 9e-039
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = +2 / -3
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLP PW LT ATAPF
Sbjct: 149 PVTI*LMPSTAATVENAQQLPQEPWSLTAATAPF 48
Score = 43.7 bits (89), Expect(4) = e-121
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 625 ASTGMCGIAMEASYPVKKGSN 687
Score = 34.1 bits (68), Expect(5) = 9e-039
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 680 PFFTGYDASIAIPHIPVEA 624
Score = 22.1 bits (42), Expect(5) = 9e-039
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2 / -3
Query: 398 VAPSTGQQPQTKQTFLKPNAQQQVLPAEHE 487
VA GQQP Q K QQQVL + E
Sbjct: 842 VAELRGQQPHA*Q*PPKSYMQQQVLLSGQE 753
>gb|CO167267.1|CO167267 FLD1_67_H10.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_67_H10_A029 5', mRNA sequence
Length = 814
Score = 266 bits (575), Expect(4) = e-109
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 60 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 239
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 240 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 419
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 420 NSWGKSWGEKGFIRLQRNIEGAS 488
Score = 114 bits (243), Expect(4) = e-109
Identities = 37/73 (50%), Positives = 45/73 (61%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 594 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 773
Query: 324 VSKNSPLSVKALK 286
S+ P K LK
Sbjct: 774 KSRKDPFGTKMLK 812
Score = 70.7 bits (148), Expect(4) = 2e-035
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 476 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 297
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 296 AGFDGNAN 273
Score = 56.5 bits (117), Expect(4) = 2e-035
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -3
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 224 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 81
Score = 44.6 bits (91), Expect(4) = 2e-035
Identities = 31/68 (45%), Positives = 33/68 (48%)
Frame = +2 / -1
Query: 284 RFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKPNAQQ 463
RF +G L V A QTG* GQQL *S Q VA GQQP Q K QQ
Sbjct: 814 RFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKSYMQQ 635
Query: 464 QVLPAEHE 487
QVL + E
Sbjct: 634 QVLLSGQE 611
Score = 43.7 bits (89), Expect(4) = e-109
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 483 ASTGMCGIAMEASYPVKKGSN 545
Score = 34.1 bits (68), Expect(4) = 2e-035
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 538 PFFTGYDASIAIPHIPVEA 482
Score = 30.9 bits (61), Expect(4) = e-109
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / +3
Query: 1098 TGEMVTLSEQELVECST 1048
TG + +LSEQELV+C T
Sbjct: 3 TGNLTSLSEQELVDCDT 53
>gb|DR011623.1|DR011623 HEAT1_6_H03.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_6_H03_A029 5', mRNA sequence
Length = 781
Score = 266 bits (575), Expect(4) = e-108
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 90 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 269
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 270 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 449
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 450 NSWGKSWGEKGFIRLQRNIEGAS 518
Score = 96.8 bits (205), Expect(4) = e-108
Identities = 29/52 (55%), Positives = 34/52 (65%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVC 349
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC
Sbjct: 624 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVC 779
Score = 70.7 bits (148), Expect(4) = 1e-033
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 506 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 327
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 326 AGFDGNAN 303
Score = 56.5 bits (117), Expect(4) = 1e-033
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -3
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 254 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 111
Score = 46.0 bits (94), Expect(4) = e-108
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2 / +3
Query: 1128 SSVESVNQIVTGEMVTLSEQELVECST 1048
++VE +NQIVTG + +LSEQELV+C T
Sbjct: 3 AAVEGINQIVTGNLTSLSEQELVDCDT 83
Score = 43.7 bits (89), Expect(4) = e-108
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 513 ASTGMCGIAMEASYPVKKGSN 575
Score = 38.6 bits (78), Expect(4) = 1e-033
Identities = 25/46 (54%), Positives = 26/46 (56%)
Frame = +2 / -1
Query: 350 QTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKPNAQQQVLPAEHE 487
QTG* GQQL *S Q VA GQQP Q K QQQVL + E
Sbjct: 778 QTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKSYMQQQVLLSGQE 641
Score = 34.1 bits (68), Expect(4) = 1e-033
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 568 PFFTGYDASIAIPHIPVEA 512
>gb|DR687672.1|DR687672 EST1077754 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWABV23 3' end, mRNA sequence
Length = 788
Score = 260 bits (562), Expect(5) = e-108
Identities = 97/143 (67%), Positives = 119/143 (83%)
Frame = -2 / +2
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF+FII NGG+D+E+DYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 161 NQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDE 340
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
+SL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV+
Sbjct: 341 ESLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVK 520
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE GYI+++RN+ ++
Sbjct: 521 NSWGKSWGEEGYIKLQRNLEEAS 589
Score = 121 bits (258), Expect(3) = 1e-042
Identities = 52/131 (39%), Positives = 77/131 (58%)
Frame = +1 / -2
Query: 625 VPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPAT 804
VPL DV+ L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 574 VPLQFDVSLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPPA 395
Query: 805 GLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPV 984
G +GNANW HIF ID H+ GIFPV V + G V V++ + + +
Sbjct: 394 GFDGNANWLISRSLLQRFLIVFRHIFVVIDCHHMGIFPVSVT*SIVGRVGVILLAVKSTI 215
Query: 985 LYDEIESGVHE 1017
+YD++ES +HE
Sbjct: 214 VYDKLESVIHE 182
Score = 101 bits (216), Expect(5) = e-108
Identities = 38/51 (74%), Positives = 47/51 (92%)
Frame = -2 / +2
Query: 1200 REKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
REKGAVAPVK+QG CGSCWAFS V++VE +NQIVTG++++LSEQELV+C T
Sbjct: 2 REKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDT 154
Score = 57.4 bits (119), Expect(3) = 1e-042
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = +2 / -3
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLPH PW TGATAPF
Sbjct: 108 PVTI*LIPSTAATVENAQQLPHAPWSFTGATAPF 7
Score = 44.1 bits (90), Expect(5) = e-108
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKGAN
Sbjct: 584 ASTGICGIAMEASYPVKKGAN 646
Score = 35.4 bits (71), Expect(5) = e-108
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGF 445
VCD +SC +TCCC + F
Sbjct: 695 VCDNYYSCPQSNTCCCMYDF 754
Score = 34.5 bits (69), Expect(3) = 1e-042
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 642 APFFTG*DASIAIPQIPVEA 583
Score = 28.1 bits (55), Expect(5) = e-108
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -2 / +1
Query: 444 RNVCLVWGCCP 412
R+ C WGCCP
Sbjct: 754 RSYCYAWGCCP 786
>gb|DN462584.1|DN462584 EST958383 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA
clone RPIIO20 5' end, mRNA sequence
Length = 894
Score = 266 bits (575), Expect(3) = e-108
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 36 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 215
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 216 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 395
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 396 NSWGKSWGEKGFIRLQRNIEGAS 464
Score = 121 bits (259), Expect(3) = e-108
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 570 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 749
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 750 KSRKDPFGTKMLKRTPAK 803
Score = 70.7 bits (148), Expect(4) = 9e-037
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 452 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 273
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 272 AGFDGNAN 249
Score = 56.5 bits (117), Expect(4) = 9e-037
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 200 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 57
Score = 49.2 bits (101), Expect(4) = 9e-037
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 802 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 623
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 622 YMQQQVLLSGQE 587
Score = 43.7 bits (89), Expect(3) = e-108
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 459 ASTGMCGIAMEASYPVKKGSN 521
Score = 34.1 bits (68), Expect(4) = 9e-037
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 514 PFFTGYDASIAIPHIPVEA 458
>gb|CF398991.1|CF398991 RTDS3_11_H09.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_11_H09_A022 5', mRNA sequence
Length = 756
Score = 266 bits (575), Expect(3) = e-106
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / +1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 235 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 414
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 415 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 594
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 595 NSWGKSWGEKGFIRLQRNIEGAS 663
Score = 117 bits (250), Expect(3) = e-106
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -2 / +1
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E LPESVDWREKGAVA VK+QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 49 ENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 228
Score = 70.3 bits (147), Expect(4) = 4e-037
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / -1
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT++++ A + E RFV+LE P+
Sbjct: 651 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVIQLSSAGACEHARFVKLERPS 472
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 471 AGFDGNAN 448
Score = 56.5 bits (117), Expect(4) = 4e-037
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -1
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 399 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 256
Score = 51.0 bits (105), Expect(4) = 4e-037
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = +2 / -2
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLP PW LT ATAPF
Sbjct: 182 PVTI*LMPSTAATVENAQQLPQEPWSLTAATAPF 81
Score = 43.7 bits (89), Expect(3) = e-106
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 658 ASTGMCGIAMEASYPVKKGSN 720
Score = 34.1 bits (68), Expect(4) = 4e-037
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 713 PFFTGYDASIAIPHIPVEA 657
>gb|CX650902.1|CX650902 COLD1_48_G09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_48_G09_A029 5', mRNA sequence
Length = 771
Score = 266 bits (575), Expect(4) = e-106
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 123 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 302
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 303 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 482
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 483 NSWGKSWGEKGFIRLQRNIEGAS 551
Score = 70.7 bits (148), Expect(5) = 1e-031
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 539 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 360
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 359 AGFDGNAN 336
Score = 69.8 bits (146), Expect(4) = e-106
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCC 391
VCD +SC +TCCC + F C WGCCP+ ATCC
Sbjct: 657 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCC 770
Score = 63.8 bits (133), Expect(4) = e-106
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = -2 / +3
Query: 1152 SCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
+CWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 12 NCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 116
Score = 56.5 bits (117), Expect(5) = 1e-031
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 287 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 144
Score = 43.7 bits (89), Expect(4) = e-106
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 546 ASTGMCGIAMEASYPVKKGSN 608
Score = 34.1 bits (68), Expect(5) = 1e-031
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 601 PFFTGYDASIAIPHIPVEA 545
Score = 24.4 bits (47), Expect(5) = 1e-031
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +2 / -3
Query: 1094 PVTIWLTLSTELTAEKAQQ 1150
PVTI L ST T E AQQ
Sbjct: 70 PVTI*LMPSTAATVENAQQ 14
Score = 24.4 bits (47), Expect(5) = 1e-031
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +2 / -3
Query: 392 QQVAPSTGQQPQTKQTFLKPNAQQQVLPAEHE 487
Q VA GQQP Q K QQQVL + E
Sbjct: 769 QHVAELRGQQPHA*Q*PPKSYMQQQVLLSGQE 674
>gb|DT634371.1|DT634371 EST1149302 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PIMG526 3' end, mRNA sequence
Length = 758
Score = 260 bits (562), Expect(4) = e-104
Identities = 97/143 (67%), Positives = 119/143 (83%)
Frame = -2 / +1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF+FII NGG+D+E+DYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 169 NQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDE 348
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
+SL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV+
Sbjct: 349 ESLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVK 528
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE GYI+++RN+ ++
Sbjct: 529 NSWGKSWGEEGYIKLQRNLEEAS 597
Score = 121 bits (258), Expect(3) = 1e-042
Identities = 52/131 (39%), Positives = 77/131 (58%)
Frame = +1 / -3
Query: 625 VPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPAT 804
VPL DV+ L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 582 VPLQFDVSLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPPA 403
Query: 805 GLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPV 984
G +GNANW HIF ID H+ GIFPV V + G V V++ + + +
Sbjct: 402 GFDGNANWLISRSLLQRFLIVFRHIFVVIDCHHMGIFPVSVT*SIVGRVGVILLAVKSTI 223
Query: 985 LYDEIESGVHE 1017
+YD++ES +HE
Sbjct: 222 VYDKLESVIHE 190
Score = 101 bits (216), Expect(4) = e-104
Identities = 38/51 (74%), Positives = 47/51 (92%)
Frame = -2 / +1
Query: 1200 REKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
REKGAVAPVK+QG CGSCWAFS V++VE +NQIVTG++++LSEQELV+C T
Sbjct: 10 REKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDT 162
Score = 57.4 bits (119), Expect(3) = 1e-042
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = +2 / -1
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLPH PW TGATAPF
Sbjct: 116 PVTI*LIPSTAATVENAQQLPHAPWSFTGATAPF 15
Score = 44.1 bits (90), Expect(4) = e-104
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKGAN
Sbjct: 592 ASTGICGIAMEASYPVKKGAN 654
Score = 34.5 bits (69), Expect(3) = 1e-042
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 650 APFFTG*DASIAIPQIPVEA 591
Score = 33.1 bits (66), Expect(4) = e-104
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / +1
Query: 504 VCDENFSCSAGSTCCCAF 451
VCD +SC +TCCC +
Sbjct: 703 VCDNYYSCPQSNTCCCMY 756
>gb|CF392022.1|CF392022 RTDR3_12_H09.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_12_H09_A022 5', mRNA
sequence
Length = 775
Score = 253 bits (548), Expect(3) = e-104
Identities = 96/138 (69%), Positives = 114/138 (82%)
Frame = -2 / +1
Query: 1023 GGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQK 844
GGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDEKSL+K
Sbjct: 1 GGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKK 180
Query: 843 AVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGP 664
A AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+NSWG
Sbjct: 181 AAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGK 360
Query: 663 KWGEAGYIRMERNVNAST 610
WGE G+IR++RN+ ++
Sbjct: 361 SWGEKGFIRLQRNIEGAS 414
Score = 121 bits (259), Expect(3) = e-104
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +1
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 520 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 699
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 700 KSRKDPFGTKMLKRTPAK 753
Score = 70.7 bits (148), Expect(4) = 9e-037
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 402 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 223
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 222 AGFDGNAN 199
Score = 56.5 bits (117), Expect(4) = 9e-037
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 150 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 7
Score = 49.2 bits (101), Expect(4) = 9e-037
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 752 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 573
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 572 YMQQQVLLSGQE 537
Score = 43.7 bits (89), Expect(3) = e-104
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 409 ASTGMCGIAMEASYPVKKGSN 471
Score = 34.1 bits (68), Expect(4) = 9e-037
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 464 PFFTGYDASIAIPHIPVEA 408
>gb|CO165167.1|CO165167 FLD1_52_G05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_52_G05_A029 5', mRNA sequence
Length = 820
Score = 250 bits (540), Expect(3) = e-104
Identities = 94/135 (69%), Positives = 114/135 (84%)
Frame = -2 / +2
Query: 1026 NGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQ 847
+GGLMD AF+FII NGG+D+E+DYPY A DG CD RKNA VV+ID +EDVPENDEKSL+
Sbjct: 5 HGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDEKSLK 184
Query: 846 KAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWG 667
KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV+NSWG
Sbjct: 185 KAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVKNSWG 364
Query: 666 PKWGEAGYIRMERNV 622
WGE G+IR++RN+
Sbjct: 365 KSWGEEGFIRLQRNI 409
Score = 123 bits (264), Expect(3) = e-104
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP++ ATCC DH SCCP YPVC++ GTC
Sbjct: 527 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 706
Query: 324 VSKNSPLSVKALKRTLAK 271
S VK LKRT AK
Sbjct: 707 QSSKDSFGVKMLKRTPAK 760
Score = 122 bits (261), Expect(3) = 1e-043
Identities = 52/132 (39%), Positives = 78/132 (59%)
Frame = +1 / -1
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D + L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 409 NVPLQSDESLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPP 230
Query: 802 TGLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAP 981
G +GNANW HIF ID H+ GIFPV V + G V V++ + +
Sbjct: 229 AGFDGNANWLISRSLLQRFFIVFRHIFVVIDCHHMGIFPVSVT*SIVGRVGVILLAVKST 50
Query: 982 VLYDEIESGVHE 1017
++YD++ES +HE
Sbjct: 49 IVYDKLESVIHE 14
Score = 59.3 bits (123), Expect(3) = 1e-043
Identities = 37/67 (55%), Positives = 38/67 (56%)
Frame = +2 / -2
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF T + LL QVP QTG GQQL *S QQVA S GQQPQ Q K
Sbjct: 759 LAGVRFSIFTPNESLLLWRQVPPSRSQTGYSLGQQL**SSQQVAESRGQQPQA*Q*PPKS 580
Query: 452 NAQQQVL 472
QQQVL
Sbjct: 579 YMQQQVL 559
Score = 44.6 bits (91), Expect(3) = e-104
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2 / +2
Query: 621 NASTGKCGIAMMASYPTKKGAN 556
+ASTG CGIAM ASYP KKGAN
Sbjct: 413 DASTGICGIAMEASYPVKKGAN 478
Score = 34.5 bits (69), Expect(3) = 1e-043
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -2
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 474 APFFTG*DASIAIPQIPVEA 415
>gb|CF393744.1|CF393744 RTDS2_1_F11.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_F11_A021 3', mRNA sequence
Length = 756
Score = 266 bits (575), Expect(4) = e-104
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / -1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 594 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 415
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 414 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 235
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 234 NSWGKSWGEKGFIRLQRNIEGAS 166
Score = 91.8 bits (194), Expect(4) = e-104
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -2 / -1
Query: 1194 KGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
KGAVA VK+QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 747 KGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 601
Score = 70.7 bits (148), Expect(4) = 3e-037
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / +1
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 178 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 357
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 358 AGFDGNAN 381
Score = 56.5 bits (117), Expect(4) = 3e-037
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / +1
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 430 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 573
Score = 51.0 bits (105), Expect(4) = 3e-037
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLP PW LT ATAPF
Sbjct: 647 PVTI*LMPSTAATVENAQQLPQEPWSLTAATAPF 748
Score = 43.7 bits (89), Expect(4) = e-104
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / -1
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 171 ASTGMCGIAMEASYPVKKGSN 109
Score = 35.4 bits (71), Expect(4) = e-104
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2 / -1
Query: 504 VCDENFSCSAGSTCCCAFGF 445
VCD +SC +TCCC + F
Sbjct: 60 VCDNYYSCPESNTCCCMYDF 1
Score = 34.1 bits (68), Expect(4) = 3e-037
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 116 PFFTGYDASIAIPHIPVEA 172
>gb|DR012887.1|DR012887 HEAT1_15_D05.g1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_15_D05_A029 5', mRNA sequence
Length = 701
Score = 260 bits (563), Expect(3) = e-103
Identities = 97/139 (69%), Positives = 117/139 (84%)
Frame = -2 / +2
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF+FII NGG+D+E+DYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 233 NQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDE 412
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV+
Sbjct: 413 KSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVK 592
Query: 678 NSWGPKWGEAGYIRMERNV 622
NSWG WGE G+I+++RN+
Sbjct: 593 NSWGKSWGEEGFIKLQRNI 649
Score = 121 bits (259), Expect(3) = e-103
Identities = 44/60 (73%), Positives = 56/60 (93%)
Frame = -2 / +2
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E+LP+S+DWREKGAVAPVK+QG CGSCWAFS V++VE +NQIVTG++++LSEQELV+C T
Sbjct: 47 EDLPKSIDWREKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDT 226
Score = 121 bits (258), Expect(3) = 1e-039
Identities = 52/132 (39%), Positives = 77/132 (58%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL D + L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 649 NVPLQFDESLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPP 470
Query: 802 TGLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAP 981
G +GNANW HIF ID H+ GIFPV V + G V V++ + +
Sbjct: 469 AGFDGNANWLISRSLLQRFLIVFRHIFVVIDCHHMGIFPVSVT*SIVGRVGVILLAVKST 290
Query: 982 VLYDEIESGVHE 1017
++YD++ES +HE
Sbjct: 289 IVYDKLESVIHE 254
Score = 74.8 bits (157), Expect(2) = 3e-021
Identities = 42/99 (42%), Positives = 48/99 (48%)
Frame = +2 / -3
Query: 737 WSRFVVQLPLKTPDL*SWNSRPPASMATLTGW*ATAXXXXXXXXXXXXXXXXMLTTLAFF 916
WS +V Q + TPD *+WNS P ASMATL G A A ++TT AFF
Sbjct: 534 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDFSSFSGTSS*SSIVTTWAFF 355
Query: 917 LFMSHFPSTAL*GXXXXXXXXXXXXXXXKAASMSPPLQP 1033
L SH PS A+*G KA SM PPL P
Sbjct: 354 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHP 238
Score = 57.4 bits (119), Expect(3) = 1e-039
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = +2 / -3
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLPH PW TGATAPF
Sbjct: 180 PVTI*LIPSTAATVENAQQLPHAPWSFTGATAPF 79
Score = 47.8 bits (98), Expect(2) = 3e-021
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +1 / -2
Query: 1057 LYELLFRQCHHLTGDDLVNAFH*AYCRESPATSALPLVLDGRDGALLPPVDALRQLLGGA 1236
+++ L Q + + G DL+++F+ + E P TS LVL G+L PV+ L Q+L
Sbjct: 217 VHQFLLGQRNQIAGHDLIDSFNGRHS*ERPTTSTCTLVLHRSHGSLFSPVNGLWQILAVG 38
Query: 1237 VVAVPSTRP 1263
++ + RP
Sbjct: 37 ILVSRAGRP 11
Score = 32.7 bits (65), Expect(3) = e-103
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -2 / +2
Query: 621 NASTGKCGIAMMASYP 574
+ASTG CGIAM ASYP
Sbjct: 653 DASTGICGIAMEASYP 700
Score = 24.0 bits (46), Expect(3) = 1e-039
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2 / -3
Query: 575 G*DAIIAIPHFPVLA 619
G*DA IAIP PV A
Sbjct: 699 G*DASIAIPQIPVEA 655
>gb|CF393377.1|CF393377 RTDR3_20_F10.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_20_F10_A022 5', mRNA
sequence
Length = 754
Score = 266 bits (575), Expect(4) = e-100
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 144 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 323
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 324 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 503
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 504 NSWGKSWGEKGFIRLQRNIEGAS 572
Score = 77.1 bits (162), Expect(4) = e-100
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = -2 / +3
Query: 1167 QGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 18 QGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 137
Score = 70.7 bits (148), Expect(4) = 2e-031
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 560 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 381
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 380 AGFDGNAN 357
Score = 56.5 bits (117), Expect(4) = 2e-031
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -3
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 308 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 165
Score = 43.7 bits (89), Expect(4) = e-100
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 567 ASTGMCGIAMEASYPVKKGSN 629
Score = 38.2 bits (77), Expect(4) = e-100
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVC 433
VCD +SC +TCCC + F C
Sbjct: 678 VCDNYYSCPESNTCCCMYDFGGYC 749
Score = 34.1 bits (68), Expect(4) = 2e-031
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 622 PFFTGYDASIAIPHIPVEA 566
Score = 30.9 bits (61), Expect(4) = 2e-031
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +2 / -1
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCP 1165
PVTI L ST T E AQQLP P
Sbjct: 91 PVTI*LMPSTAATVENAQQLPQEP 20
>gb|DR693562.1|DR693562 EST1083651 Normalized pine embryo library, Lib_D Pinus taeda cDNA
clone PWAE096 3' end, mRNA sequence
Length = 749
Score = 188 bits (404), Expect(5) = e-100
Identities = 70/102 (68%), Positives = 85/102 (83%)
Frame = -2 / +3
Query: 915 KNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDH 736
KNA VV+ID +EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDH
Sbjct: 195 KNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDH 374
Query: 735 GVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
GV VGYG+E+GKDYWIV+NSWG WGE G+IR+ RN+ ++
Sbjct: 375 GVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLHRNIEGAS 500
Score = 88.1 bits (186), Expect(5) = e-100
Identities = 26/46 (56%), Positives = 30/46 (65%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCP 367
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP
Sbjct: 606 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCP 743
Score = 82.6 bits (174), Expect(5) = e-100
Identities = 31/42 (73%), Positives = 33/42 (78%)
Frame = -2 / +1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRK 913
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RK
Sbjct: 73 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRK 198
Score = 69.3 bits (145), Expect(5) = 8e-029
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / -1
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVP+ +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 488 NVPVQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGTCEHARFVKLERPS 309
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 308 AGFDGNAN 285
Score = 43.7 bits (89), Expect(5) = e-100
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 495 ASTGMCGIAMEASYPVKKGSN 557
Score = 40.9 bits (83), Expect(5) = e-100
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -2 / +1
Query: 1113 VNQIVTGEMVTLSEQELVECST 1048
+NQIVTG + +LSEQELV+C T
Sbjct: 1 INQIVTGNLTSLSEQELVDCDT 66
Score = 38.6 bits (78), Expect(5) = 8e-029
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +1 / -3
Query: 907 GIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
G F V V + G VRV+I + V+YD++ES +HE
Sbjct: 204 GHFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 94
Score = 34.1 bits (68), Expect(5) = 8e-029
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 550 PFFTGYDASIAIPHIPVEA 494
Score = 33.1 bits (66), Expect(5) = 8e-029
Identities = 21/40 (52%), Positives = 22/40 (55%)
Frame = +2 / -2
Query: 368 GQQLA*SLQQVAPSTGQQPQTKQTFLKPNAQQQVLPAEHE 487
GQQL *S Q VA GQQP Q K QQQVL + E
Sbjct: 742 GQQL**SSQHVAELRGQQPHA*Q*PPKSYMQQQVLLSGQE 623
Score = 24.9 bits (48), Expect(5) = 8e-029
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 874 HIFKAIDAHNPGIF 915
HIF AI+ H+ GIF
Sbjct: 236 HIFVAINCHHMGIF 195
>gb|CX716008.1|CX716008 RTPQ1_39_C01.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_39_C01_A032 5', mRNA sequence
Length = 687
Score = 265 bits (574), Expect(2) = 4e-099
Identities = 100/142 (70%), Positives = 117/142 (82%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 261 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 440
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 441 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 620
Query: 678 NSWGPKWGEAGYIRMERNVNAS 613
NSWG WGE G+IR++RN+ +
Sbjct: 621 NSWGKSWGEKGFIRLQRNIEGA 686
Score = 117 bits (250), Expect(2) = 4e-099
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -2 / +3
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E LPESVDWREKGAVA VK+QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 75 ENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 254
Score = 70.7 bits (148), Expect(3) = 1e-032
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 677 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 498
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 497 AGFDGNAN 474
Score = 56.5 bits (117), Expect(3) = 1e-032
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 425 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 282
Score = 51.5 bits (106), Expect(3) = 1e-032
Identities = 24/50 (48%), Positives = 24/50 (48%)
Frame = +2 / -3
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPFXXXXXXXXXXXXXXXW 1243
PVTI L ST T E AQQLP PW LT ATAPF W
Sbjct: 208 PVTI*LMPSTAATVENAQQLPQEPWSLTAATAPFSLQSTDSGKFSPSEYW 59
>gb|CF402626.1|CF402626 RTWW1_21_D01.g1_A015 Well-watered loblolly pine roots WW1 Pinus taeda
cDNA clone RTWW1_21_D01_A015 5', mRNA sequence
Length = 689
Score = 258 bits (558), Expect(3) = 4e-098
Identities = 98/141 (69%), Positives = 115/141 (81%)
Frame = -2 / +2
Query: 1032 GCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKS 853
GCNG LMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDEKS
Sbjct: 5 GCNGCLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKS 184
Query: 852 LQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNS 673
L+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+NS
Sbjct: 185 LKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNS 364
Query: 672 WGPKWGEAGYIRMERNVNAST 610
WG WGE G+IR+ RN+ ++
Sbjct: 365 WGKSWGEKGFIRLHRNIEGAS 427
Score = 96.8 bits (205), Expect(3) = 4e-098
Identities = 29/52 (55%), Positives = 34/52 (65%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVC 349
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC
Sbjct: 533 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVC 688
Score = 69.3 bits (145), Expect(4) = 3e-033
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVP+ +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 415 NVPVQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 236
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 235 AGFDGNAN 212
Score = 56.5 bits (117), Expect(4) = 3e-033
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 163 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 20
Score = 43.7 bits (89), Expect(3) = 4e-098
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 422 ASTGMCGIAMEASYPVKKGSN 484
Score = 38.6 bits (78), Expect(4) = 3e-033
Identities = 25/46 (54%), Positives = 26/46 (56%)
Frame = +2 / -3
Query: 350 QTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKPNAQQQVLPAEHE 487
QTG* GQQL *S Q VA GQQP Q K QQQVL + E
Sbjct: 687 QTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKSYMQQQVLLSGQE 550
Score = 34.1 bits (68), Expect(4) = 3e-033
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 477 PFFTGYDASIAIPHIPVEA 421
>gb|DT624915.1|DT624915 EST1159190 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAJ88 5' end, mRNA sequence
Length = 969
Score = 233 bits (503), Expect(3) = 6e-098
Identities = 87/127 (68%), Positives = 105/127 (82%)
Frame = -2 / +2
Query: 990 IKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAI 811
I NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDEKSL+KA AHQP+SVAI
Sbjct: 2 IDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAI 181
Query: 810 EAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRME 631
EA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+NSWG WGE G+IR++
Sbjct: 182 EASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQ 361
Query: 630 RNVNAST 610
RN+ ++
Sbjct: 362 RNIEGAS 382
Score = 121 bits (259), Expect(3) = 6e-098
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 488 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 667
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 668 KSRKDPFGTKMLKRTPAK 721
Score = 70.7 bits (148), Expect(4) = 9e-033
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 370 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 191
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 190 AGFDGNAN 167
Score = 49.2 bits (101), Expect(4) = 9e-033
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -1
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 720 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 541
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 540 YMQQQVLLSGQE 505
Score = 43.7 bits (89), Expect(3) = 6e-098
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 377 ASTGMCGIAMEASYPVKKGSN 439
Score = 42.8 bits (87), Expect(4) = 9e-033
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1 / -3
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLY 990
HIF AI+ H+ GIF V V + G VRV+I + V+Y
Sbjct: 118 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVY 2
Score = 34.1 bits (68), Expect(4) = 9e-033
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 432 PFFTGYDASIAIPHIPVEA 376
>gb|CV143704.1|CV143704 EST854913 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPICW45 5' end, mRNA sequence
Length = 937
Score = 233 bits (503), Expect(3) = 6e-098
Identities = 87/127 (68%), Positives = 105/127 (82%)
Frame = -2 / +2
Query: 990 IKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAI 811
I NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDEKSL+KA AHQP+SVAI
Sbjct: 2 IDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAI 181
Query: 810 EAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRME 631
EA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+NSWG WGE G+IR++
Sbjct: 182 EASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQ 361
Query: 630 RNVNAST 610
RN+ ++
Sbjct: 362 RNIEGAS 382
Score = 121 bits (259), Expect(3) = 6e-098
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 488 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 667
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 668 KSRKDPFGTKMLKRTPAK 721
Score = 70.7 bits (148), Expect(4) = 9e-033
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -1
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 370 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 191
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 190 AGFDGNAN 167
Score = 49.2 bits (101), Expect(4) = 9e-033
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -2
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 720 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 541
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 540 YMQQQVLLSGQE 505
Score = 43.7 bits (89), Expect(3) = 6e-098
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 377 ASTGMCGIAMEASYPVKKGSN 439
Score = 42.8 bits (87), Expect(4) = 9e-033
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +1 / -1
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLY 990
HIF AI+ H+ GIF V V + G VRV+I + V+Y
Sbjct: 118 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVY 2
Score = 34.1 bits (68), Expect(4) = 9e-033
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 432 PFFTGYDASIAIPHIPVEA 376
>gb|CF668985.1|CF668985 RTCNT1_39_G12.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_G12_A029 5', mRNA sequence
Length = 736
Score = 258 bits (557), Expect(2) = 8e-097
Identities = 98/135 (72%), Positives = 112/135 (82%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 330 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 509
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 510 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 689
Query: 678 NSWGPKWGEAGYIRM 634
NSWG WGE G+IR+
Sbjct: 690 NSWGKSWGEKGFIRL 734
Score = 117 bits (250), Expect(2) = 8e-097
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -2 / +3
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E LPESVDWREKGAVA VK+QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 144 ENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 323
Score = 61.1 bits (127), Expect(3) = 1e-029
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +1 / -3
Query: 637 TDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPATGLNG 816
+D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+ G +G
Sbjct: 731 SDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPSAGFDG 552
Query: 817 NAN 825
NAN
Sbjct: 551 NAN 543
Score = 56.1 bits (116), Expect(3) = 1e-029
Identities = 22/48 (45%), Positives = 32/48 (66%)
Frame = +1 / -3
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G +RV+I + V+YD++ES +HE
Sbjct: 494 HIFVAINCHHMGIFSVSVTAAIVGHIRVIILTVKPTVVYDKLESIIHE 351
Score = 51.5 bits (106), Expect(3) = 1e-029
Identities = 24/50 (48%), Positives = 24/50 (48%)
Frame = +2 / -1
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPFXXXXXXXXXXXXXXXW 1243
PVTI L ST T E AQQLP PW LT ATAPF W
Sbjct: 277 PVTI*LMPSTAATVENAQQLPQEPWSLTAATAPFSLQSTDSGKFSPSEYW 128
>gb|CF394277.1|CF394277 RTDS2_4_A02.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_4_A02_A021 5', mRNA sequence
Length = 731
Score = 250 bits (541), Expect(4) = 8e-096
Identities = 95/132 (71%), Positives = 108/132 (81%)
Frame = -2 / +1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 169 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 348
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 349 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 528
Query: 678 NSWGPKWGEAGY 643
NSWG WG G+
Sbjct: 529 NSWGKSWGREGF 564
Score = 91.8 bits (194), Expect(4) = 8e-096
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -2 / +1
Query: 1194 KGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
KGAVA VK+QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 16 KGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 162
Score = 56.5 bits (117), Expect(4) = 9e-033
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -3
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 333 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 190
Score = 55.1 bits (114), Expect(4) = 9e-033
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = +1 / -3
Query: 658 PLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPATGLNGNAN 825
P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+ G +GNAN
Sbjct: 549 PALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPSAGFDGNAN 382
Score = 51.0 bits (105), Expect(4) = 9e-033
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = +2 / -1
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLP PW LT ATAPF
Sbjct: 116 PVTI*LMPSTAATVENAQQLPQEPWSLTAATAPF 15
Score = 43.7 bits (89), Expect(4) = 8e-096
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 593 ASTGMCGIAMEASYPVKKGSN 655
Score = 34.1 bits (68), Expect(4) = 9e-033
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 648 PFFTGYDASIAIPHIPVEA 592
Score = 24.0 bits (46), Expect(4) = 8e-096
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 657 GEAGYIRMERNVNAST 610
GE G+IR+ RN+ ++
Sbjct: 551 GEKGFIRLHRNIEGAS 598
>gb|CF398001.1|CF398001 RTDS3_22_F03.b1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_22_F03_A022 3', mRNA sequence
Length = 744
Score = 250 bits (541), Expect(5) = 2e-094
Identities = 95/132 (71%), Positives = 108/132 (81%)
Frame = -2 / -3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 649 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 470
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 469 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 290
Query: 678 NSWGPKWGEAGY 643
NSWG WG G+
Sbjct: 289 NSWGKSWGREGF 254
Score = 59.3 bits (123), Expect(5) = 2e-094
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGA 400
VCD +SC +TCCC + F C WGCCP+ A
Sbjct: 114 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSA 10
Score = 56.5 bits (117), Expect(3) = 5e-023
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / +2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 485 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 628
Score = 55.6 bits (115), Expect(3) = 5e-023
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +1 / +2
Query: 655 APLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPATGLNGNAN 825
+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+ G +GNAN
Sbjct: 266 SPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPSAGFDGNAN 436
Score = 47.8 bits (98), Expect(5) = 2e-094
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -2 / -3
Query: 1131 VSSVESVNQIVTGEMVTLSEQELVECST 1048
V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 739 VAAVEGINQIVTGNLTSLSEQELVDCDT 656
Score = 43.7 bits (89), Expect(5) = 2e-094
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / -1
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 225 ASTGMCGIAMEASYPVKKGSN 163
Score = 34.1 bits (68), Expect(3) = 5e-023
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 170 PFFTGYDASIAIPHIPVEA 226
Score = 22.1 bits (42), Expect(5) = 2e-094
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 654 EAGYIRMERNVNAST 610
E G+IR++RN+ ++
Sbjct: 264 EKGFIRLQRNIEGAS 220
>gb|BX252311.1|BX252311 BX252311 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP062G03 similar to CYSTEINE PROTEINASE
PRECURSOR, mRNA sequence
Length = 716
Score = 213 bits (460), Expect(3) = 6e-094
Identities = 80/119 (67%), Positives = 98/119 (82%)
Frame = -2 / +2
Query: 966 EDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQ 787
E+DYPY A DG CD RKNA VV+ID +EDVPENDEKSL+KA A+QP+SVAIEA GREFQ
Sbjct: 2 EEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQ 181
Query: 786 LYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV+NSWG WGE G+IR++RN+ ++
Sbjct: 182 FYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNLEEAS 358
Score = 127 bits (272), Expect(3) = 6e-094
Identities = 43/78 (55%), Positives = 50/78 (64%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP++ ATCC DH SCCP YPVC++ GTC
Sbjct: 464 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 643
Query: 324 VSKNSPLSVKALKRTLAK 271
S P VK LKRT AK
Sbjct: 644 XSXQDPFGVKMLKRTPAK 697
Score = 99.6 bits (211), Expect(3) = 4e-038
Identities = 45/113 (39%), Positives = 64/113 (56%)
Frame = +1 / -2
Query: 625 VPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPAT 804
VPL +D + L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 343 VPLQSDESLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGTSEHTRFVKLELPPA 164
Query: 805 GLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHVALPVHGSVRVVI 963
G +GNANW HIF ID H+ GIFPV V + G V V++
Sbjct: 163 GFDGNANWLISRSLLQRFLIVFRHIFVVIDCHHMGIFPVSVT*SIVGRVGVIL 5
Score = 63.4 bits (132), Expect(3) = 4e-038
Identities = 38/67 (56%), Positives = 39/67 (58%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF T +G LL QVP QTG GQQL *S QQVA S GQQPQ Q K
Sbjct: 696 LAGVRFSIFTPNGSXLLXRQVPPSRSQTGYSLGQQL**SSQQVAESRGQQPQA*Q*PPKS 517
Query: 452 NAQQQVL 472
QQQVL
Sbjct: 516 YMQQQVL 496
Score = 44.1 bits (90), Expect(3) = 6e-094
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKGAN
Sbjct: 353 ASTGICGIAMEASYPVKKGAN 415
Score = 34.5 bits (69), Expect(3) = 4e-038
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 411 APFFTG*DASIAIPQIPVEA 352
>gb|DR019198.1|DR019198 STRS1_28_A04.g1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_28_A04_A034 5', mRNA sequence
Length = 881
Score = 119 bits (254), Expect(4) = 9e-092
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = -2 / +3
Query: 918 RKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLD 739
+ NA +IDGFEDVP N+EK+L++AV HQPV+VAIEA G++FQ Y GVF+G C T LD
Sbjct: 423 KPNAIAATIDGFEDVPANNEKALKEAVGHQPVAVAIEASGKDFQFYSKGVFTGECATELD 602
Query: 738 HGVVAVGYG 712
HGVVAVGYG
Sbjct: 603 HGVVAVGYG 629
Score = 114 bits (244), Expect(4) = 9e-092
Identities = 41/62 (66%), Positives = 55/62 (88%)
Frame = -2 / +3
Query: 1230 AEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECS 1051
++ LPES+DWREKGAV PVKNQGQCGSCWAFS ++SVE ++ + TG++V+LSEQ+LV+CS
Sbjct: 111 SDNLPESIDWREKGAVNPVKNQGQCGSCWAFSTIASVEGISYLKTGKLVSLSEQQLVDCS 290
Query: 1050 TD 1045
+
Sbjct: 291 KE 296
Score = 95.9 bits (203), Expect(4) = 9e-092
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -2 / +3
Query: 702 GKDYWIVRNSWGPKWGEAGYIRMERNVNASTGKCGIAMMASYPTKK 565
G +YWIVRNSWGP+WGE GYI+M+R++ A GKCGIAM ASYPTKK
Sbjct: 642 GINYWIVRNSWGPEWGEEGYIKMQRDIEAVEGKCGIAMQASYPTKK 779
Score = 66.6 bits (139), Expect(4) = 9e-092
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVS 895
N+GCNGGLMD+AF +II NGG+ ED+YPY A +C ++ ++
Sbjct: 297 NAGCNGGLMDSAFQYIIDNGGVVAEDEYPYTAEASECSPSKVKPNAIA 440
Score = 51.9 bits (107), Expect(4) = 2e-025
Identities = 22/34 (64%), Positives = 22/34 (64%)
Frame = +2 / -2
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PV L STE E AQQLPH PWF TG TAPF
Sbjct: 247 PVLR*LMPSTEAIVENAQQLPHWPWFFTGLTAPF 146
Score = 48.7 bits (100), Expect(4) = 2e-025
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +2 / -2
Query: 566 FFVG*DAIIAIPHFPVLALTFLSIRM*PASPHFGPHELRTIQ 691
F VG +A +AIPHFP A I + P+SPH GP E TIQ
Sbjct: 778 FLVGYEACMAIPHFPSTASISRCIFIYPSSPHSGPQEFLTIQ 653
Score = 43.2 bits (88), Expect(4) = 2e-025
Identities = 24/70 (34%), Positives = 30/70 (42%)
Frame = +2 / -2
Query: 737 WSRFVVQLPLKTPDL*SWNSRPPASMATLTGW*ATAXXXXXXXXXXXXXXXXMLTTLAFF 916
WS V P+ TP *+ S P ASMAT TGW TA ++ +AF
Sbjct: 604 WSSSVAHSPVNTPFE*N*KSLPLASMATATGWWPTASLRAFSLLAGTSSKPSIVAAIAFG 425
Query: 917 LFMSHFPSTA 946
L + S A
Sbjct: 424 LTLEGLHSLA 395
Score = 27.6 bits (54), Expect(4) = 2e-025
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +1 / -1
Query: 946 SVRVVIFGIDAPVLYDEIESGVHE 1017
S+ ++IF D ++YD +E VH+
Sbjct: 389 SIWILIFSNDPTIIYDILEGAVHK 318
>gb|CF668995.1|CF668995 RTCNT1_39_H10.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_39_H10_A029 5', mRNA sequence
Length = 721
Score = 211 bits (456), Expect(3) = 2e-091
Identities = 79/116 (68%), Positives = 95/116 (81%)
Frame = -2 / +2
Query: 957 YPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYK 778
YPY A DG CD RKNA VV+ID +EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+
Sbjct: 2 YPYMANDGSCDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYE 181
Query: 777 SGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
SGVF+ +C T LDHGV VGYG+E+GKDYWIV+NSWG WGE G+IR++RN+ ++
Sbjct: 182 SGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNIEGAS 349
Score = 121 bits (259), Expect(3) = 2e-091
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 455 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 634
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 635 KSRKDPFGTKMLKRTPAK 688
Score = 70.7 bits (148), Expect(4) = 2e-030
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -1
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 337 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 158
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 157 AGFDGNAN 134
Score = 49.2 bits (101), Expect(4) = 2e-030
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -2
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 687 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 508
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 507 YMQQQVLLSGQE 472
Score = 43.7 bits (89), Expect(3) = 2e-091
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 344 ASTGMCGIAMEASYPVKKGSN 406
Score = 35.0 bits (70), Expect(4) = 2e-030
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1 / -1
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRV 957
HIF AI+ H+ GIF V V + G VRV
Sbjct: 85 HIFVAINCHHMGIFSVSVTAAIVGHVRV 2
Score = 34.1 bits (68), Expect(4) = 2e-030
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 399 PFFTGYDASIAIPHIPVEA 343
>gb|CF385673.1|CF385673 RTDR1_5_B07.g1_A015 Loblolly pine roots recovering from drought DR1
Pinus taeda cDNA clone RTDR1_5_B07_A015 5', mRNA
sequence
Length = 707
Score = 206 bits (444), Expect(3) = 7e-090
Identities = 78/115 (67%), Positives = 93/115 (80%)
Frame = -2 / +2
Query: 954 PYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKS 775
PY A DG CD RKNA VV+ID +EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+S
Sbjct: 2 PYMANDGICDAYRKNAHVVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYES 181
Query: 774 GVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
GVF+ +C T LDHGV VGYG+E+GKDYWIV+NSWG WGE G+IR+ RN+ ++
Sbjct: 182 GVFTSTCGTQLDHGVTLVGYGSESGKDYWIVKNSWGKSWGEKGFIRLHRNIEGAS 346
Score = 121 bits (259), Expect(3) = 7e-090
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 452 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 631
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 632 KSRKDPFGTKMLKRTPAK 685
Score = 69.3 bits (145), Expect(4) = 4e-029
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVP+ +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 334 NVPVQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 155
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 154 AGFDGNAN 131
Score = 49.2 bits (101), Expect(4) = 4e-029
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 684 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 505
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 504 YMQQQVLLSGQE 469
Score = 43.7 bits (89), Expect(3) = 7e-090
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 341 ASTGMCGIAMEASYPVKKGSN 403
Score = 34.1 bits (68), Expect(4) = 4e-029
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 396 PFFTGYDASIAIPHIPVEA 340
Score = 31.8 bits (63), Expect(4) = 4e-029
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1 / -2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVR 954
HIF AI+ H+ GIF V V + G VR
Sbjct: 82 HIFVAINCHHMGIFSVSVTDAIVGHVR 2
>gb|CO364426.1|CO364426 RTK1_15_D07.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_15_D07_A029 5', mRNA sequence
Length = 891
Score = 198 bits (426), Expect(3) = 2e-088
Identities = 74/107 (69%), Positives = 90/107 (84%)
Frame = -2 / +2
Query: 942 VDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFS 763
+DG CD RKNA VV+ID +EDVPENDEKSL+KA A+QP+SVAIEA GREFQ Y+SGVF+
Sbjct: 11 LDGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFT 190
Query: 762 GSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNV 622
+C T LDHGV VGYG+E+G DYWIV+NSWG WGE G+IR++RN+
Sbjct: 191 SACGTQLDHGVTLVGYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNI 331
Score = 123 bits (264), Expect(3) = 2e-088
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP++ ATCC DH SCCP YPVC++ GTC
Sbjct: 449 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 628
Query: 324 VSKNSPLSVKALKRTLAK 271
S VK LKRT AK
Sbjct: 629 QSSKDSFGVKMLKRTPAK 682
Score = 97.3 bits (206), Expect(3) = 3e-036
Identities = 43/102 (42%), Positives = 59/102 (57%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D + L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 331 NVPLQSDESLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPP 152
Query: 802 TGLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHV 927
G +GNANW HIF ID H+ GIFPV V
Sbjct: 151 AGFDGNANWLISRSLLQRFFIVFRHIFVVIDCHHMGIFPVSV 26
Score = 59.3 bits (123), Expect(3) = 3e-036
Identities = 37/67 (55%), Positives = 38/67 (56%)
Frame = +2 / -1
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF T + LL QVP QTG GQQL *S QQVA S GQQPQ Q K
Sbjct: 681 LAGVRFSIFTPNESLLLWRQVPPSRSQTGYSLGQQL**SSQQVAESRGQQPQA*Q*PPKS 502
Query: 452 NAQQQVL 472
QQQVL
Sbjct: 501 YMQQQVL 481
Score = 44.6 bits (91), Expect(3) = 2e-088
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2 / +2
Query: 621 NASTGKCGIAMMASYPTKKGAN 556
+ASTG CGIAM ASYP KKGAN
Sbjct: 335 DASTGICGIAMEASYPVKKGAN 400
Score = 34.5 bits (69), Expect(3) = 3e-036
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 396 APFFTG*DASIAIPQIPVEA 337
>gb|DR022576.1|DR022576 STRS1_52_B04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_52_B04_A034 3', mRNA sequence
Length = 768
Score = 115 bits (245), Expect(4) = 1e-087
Identities = 46/61 (75%), Positives = 51/61 (83%)
Frame = -2 / +2
Query: 894 IDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGY 715
IDGFEDVP N+E +L+KAVAHQPVSVAIEA GR+FQ Y SGVF+G C LDHGVV VGY
Sbjct: 314 IDGFEDVPVNNEAALKKAVAHQPVSVAIEASGRDFQFYSSGVFTGKCGNKLDHGVVVVGY 493
Query: 714 G 712
G
Sbjct: 494 G 496
Score = 105 bits (224), Expect(4) = 1e-087
Identities = 39/54 (72%), Positives = 48/54 (88%)
Frame = -2 / +2
Query: 1206 DWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTD 1045
DWR+KGAV PVKNQGQCGSCWAFS V+SVE +N I TG++V+LSEQ+LV+CS +
Sbjct: 2 DWRKKGAVTPVKNQGQCGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCSKE 163
Score = 100 bits (214), Expect(4) = 1e-087
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = -2 / +2
Query: 702 GKDYWIVRNSWGPKWGEAGYIRMERNVNASTGKCGIAMMASYPTKK 565
G DYWIVRNSWGPKWGE GYIRM+R + A GKCGIAM ASYPTKK
Sbjct: 509 GIDYWIVRNSWGPKWGEKGYIRMQRGIKAVEGKCGIAMQASYPTKK 646
Score = 61.1 bits (127), Expect(4) = 1e-087
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = -2 / +2
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNR 916
N+GCNGGLMD AF +II NGGI +E +YPY A +C +
Sbjct: 164 NAGCNGGLMDNAFQYIIDNGGIVSEAEYPYTAEARECSTTK 286
Score = 51.5 bits (106), Expect(4) = 3e-028
Identities = 23/34 (67%), Positives = 23/34 (67%)
Frame = +2 / -1
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PV I L STE T E AQQLPH P F TG TAPF
Sbjct: 114 PVLI*LMPSTEATVENAQQLPHWP*FFTGVTAPF 13
Score = 50.6 bits (104), Expect(4) = 3e-028
Identities = 23/42 (54%), Positives = 26/42 (61%)
Frame = +2 / -1
Query: 566 FFVG*DAIIAIPHFPVLALTFLSIRM*PASPHFGPHELRTIQ 691
F VG +A +AIPHFP AL I + P SPH GP E TIQ
Sbjct: 645 FLVGYEACMAIPHFPSTALIPRCILIYPFSPHLGPQEFLTIQ 520
Score = 46.0 bits (94), Expect(4) = 3e-028
Identities = 22/35 (62%), Positives = 25/35 (71%)
Frame = +2 / -1
Query: 740 SRFVVQLPLKTPDL*SWNSRPPASMATLTGW*ATA 844
S + LP+ TPD *+W SRP ASMAT TG *ATA
Sbjct: 468 SSLLPHLPVNTPDE*NWKSRPLASMATDTG**ATA 364
Score = 33.1 bits (66), Expect(4) = 3e-028
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1 / -3
Query: 928 ALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
ALP GSVR++ F D ++YD ++ VH+
Sbjct: 274 ALPSFGSVRILCFTNDPAIIYDILKCVVHK 185
>gb|CV031915.1|CV031915 RTNACL1_4_C06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_4_C06_A029 5', mRNA sequence
Length = 769
Score = 223 bits (481), Expect(2) = 1e-087
Identities = 86/119 (72%), Positives = 100/119 (84%)
Frame = -2 / +1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF+FII NGG+D+E+DYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 412 NQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDE 591
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIV 682
KSL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV
Sbjct: 592 KSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIV 768
Score = 121 bits (259), Expect(2) = 1e-087
Identities = 44/60 (73%), Positives = 56/60 (93%)
Frame = -2 / +1
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E+LP+S+DWREKGAVAPVK+QG CGSCWAFS V++VE +NQIVTG++++LSEQELV+C T
Sbjct: 226 EDLPKSIDWREKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDT 405
Score = 100 bits (212), Expect(2) = 1e-031
Identities = 43/112 (38%), Positives = 64/112 (57%)
Frame = +1 / -2
Query: 682 DDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPATGLNGNANWXXXXXXXXXXX 861
++PVV L +A + +V + A ++E TRFV+LELP G +GNANW
Sbjct: 768 NNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPPAGFDGNANWLISRSLLQRFL 589
Query: 862 XXXXHIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF ID H+ GIFPV V + G V V++ + + ++YD++ES +HE
Sbjct: 588 IVFRHIFVVIDCHHMGIFPVSVT*SIVGRVGVILLAVKSTIVYDKLESVIHE 433
Score = 74.8 bits (157), Expect(2) = 3e-021
Identities = 42/99 (42%), Positives = 48/99 (48%)
Frame = +2 / -3
Query: 737 WSRFVVQLPLKTPDL*SWNSRPPASMATLTGW*ATAXXXXXXXXXXXXXXXXMLTTLAFF 916
WS +V Q + TPD *+WNS P ASMATL G A A ++TT AFF
Sbjct: 713 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDFSSFSGTSS*SSIVTTWAFF 534
Query: 917 LFMSHFPSTAL*GXXXXXXXXXXXXXXXKAASMSPPLQP 1033
L SH PS A+*G KA SM PPL P
Sbjct: 533 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHP 417
Score = 57.4 bits (119), Expect(2) = 1e-031
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = +2 / -3
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLPH PW TGATAPF
Sbjct: 359 PVTI*LIPSTAATVENAQQLPHAPWSFTGATAPF 258
Score = 47.8 bits (98), Expect(2) = 3e-021
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +1 / -2
Query: 1057 LYELLFRQCHHLTGDDLVNAFH*AYCRESPATSALPLVLDGRDGALLPPVDALRQLLGGA 1236
+++ L Q + + G DL+++F+ + E P TS LVL G+L PV+ L Q+L
Sbjct: 396 VHQFLLGQRNQIAGHDLIDSFNGRHS*ERPTTSTCTLVLHRSHGSLFSPVNGLWQILAVG 217
Query: 1237 VVAVPSTRP 1263
++ + RP
Sbjct: 216 ILVSRAGRP 190
>gb|CX714844.1|CX714844 RTPQ1_27_B02.g1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_27_B02_A032 5', mRNA sequence
Length = 725
Score = 182 bits (392), Expect(3) = 1e-083
Identities = 68/98 (69%), Positives = 84/98 (85%)
Frame = -2 / +1
Query: 915 KNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDH 736
+NA VV+ID +EDVPENDEKSL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDH
Sbjct: 1 ENAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDH 180
Query: 735 GVVAVGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNV 622
GV VGYG+E+G DYWIV+NSWG WGE G+IR++RN+
Sbjct: 181 GVTLVGYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNI 294
Score = 123 bits (264), Expect(3) = 1e-083
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = -2 / +1
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP++ ATCC DH SCCP YPVC++ GTC
Sbjct: 412 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 591
Query: 324 VSKNSPLSVKALKRTLAK 271
S VK LKRT AK
Sbjct: 592 QSSKDSFGVKMLKRTPAK 645
Score = 90.9 bits (192), Expect(3) = 2e-034
Identities = 40/98 (40%), Positives = 56/98 (57%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D + L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 294 NVPLQSDESLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPP 115
Query: 802 TGLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIF 915
G +GNANW HIF ID H+ GIF
Sbjct: 114 AGFDGNANWLISRSLLQRFFIVFRHIFVVIDCHHMGIF 1
Score = 59.3 bits (123), Expect(3) = 2e-034
Identities = 37/67 (55%), Positives = 38/67 (56%)
Frame = +2 / -1
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF T + LL QVP QTG GQQL *S QQVA S GQQPQ Q K
Sbjct: 644 LAGVRFSIFTPNESLLLWRQVPPSRSQTGYSLGQQL**SSQQVAESRGQQPQA*Q*PPKS 465
Query: 452 NAQQQVL 472
QQQVL
Sbjct: 464 YMQQQVL 444
Score = 44.6 bits (91), Expect(3) = 1e-083
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2 / +1
Query: 621 NASTGKCGIAMMASYPTKKGAN 556
+ASTG CGIAM ASYP KKGAN
Sbjct: 298 DASTGICGIAMEASYPVKKGAN 363
Score = 34.5 bits (69), Expect(3) = 2e-034
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -1
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 359 APFFTG*DASIAIPQIPVEA 300
>gb|CF392425.1|CF392425 RTDR3_7_B09.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_7_B09_A022 5', mRNA sequence
Length = 618
Score = 247 bits (533), Expect(3) = 2e-083
Identities = 93/133 (69%), Positives = 112/133 (84%)
Frame = -2 / +3
Query: 1020 GLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKA 841
GLMD AF+FII NGG+D+E+DYPY A DG CD RKNA VV+ID +EDVPENDEKSL+KA
Sbjct: 3 GLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKA 182
Query: 840 VAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPK 661
A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV+NSWG
Sbjct: 183 AANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVKNSWGKS 362
Query: 660 WGEAGYIRMERNV 622
WGE G+IR++RN+
Sbjct: 363 WGEEGFIRLQRNI 401
Score = 124 bits (266), Expect(3) = 9e-034
Identities = 53/132 (40%), Positives = 79/132 (59%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D + L+P +PR+ ++PVV L +A + T+V + A ++E TRFV+LELP
Sbjct: 401 NVPLQSDESLLSPALSPRILNNPVVCARL*PIAHQSHTVV*LGSAGASEHTRFVKLELPP 222
Query: 802 TGLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAP 981
G +GNANW HIF ID H+ GIFPV V + G V V++ + +
Sbjct: 221 AGFDGNANWLISRSLLQRFLIVFRHIFVVIDCHHMGIFPVSVT*SIVGRVGVILLAVKST 42
Query: 982 VLYDEIESGVHE 1017
++YD++ES +HE
Sbjct: 41 IVYDKLESVIHE 6
Score = 58.3 bits (121), Expect(3) = 2e-083
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVE 406
VCD +SC +TCCC + F C WGCCP++
Sbjct: 519 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLD 617
Score = 44.6 bits (91), Expect(3) = 2e-083
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2 / +3
Query: 621 NASTGKCGIAMMASYPTKKGAN 556
+ASTG CGIAM ASYP KKGAN
Sbjct: 405 DASTGICGIAMEASYPVKKGAN 470
Score = 34.5 bits (69), Expect(3) = 9e-034
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 466 APFFTG*DASIAIPQIPVEA 407
Score = 23.5 bits (45), Expect(3) = 9e-034
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +2 / -3
Query: 407 STGQQPQTKQTFLKPNAQQQVL 472
S GQQPQ Q K QQQVL
Sbjct: 616 SRGQQPQA*Q*PPKSYMQQQVL 551
>gb|CF668432.1|CF668432 RTCNT1_36_A09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_36_A09_A029 5', mRNA sequence
Length = 774
Score = 182 bits (391), Expect(3) = 1e-082
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -2 / +3
Query: 903 VVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVA 724
VV+ID +EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV
Sbjct: 3 VVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTL 182
Query: 723 VGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
VGYG+E+GKDYWIV+NSWG WGE G+IR++RN+ ++
Sbjct: 183 VGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNIEGAS 296
Score = 121 bits (259), Expect(3) = 1e-082
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 402 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 581
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 582 KSRKDPFGTKMLKRTPAK 635
Score = 70.7 bits (148), Expect(3) = 3e-025
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 284 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 105
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 104 AGFDGNAN 81
Score = 49.2 bits (101), Expect(3) = 3e-025
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 634 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 455
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 454 YMQQQVLLSGQE 419
Score = 43.7 bits (89), Expect(3) = 1e-082
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 291 ASTGMCGIAMEASYPVKKGSN 353
Score = 34.1 bits (68), Expect(3) = 3e-025
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 346 PFFTGYDASIAIPHIPVEA 290
>gb|CF671372.1|CF671372 RTCNT1_56_D09.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_56_D09_A029 5', mRNA sequence
Length = 676
Score = 182 bits (391), Expect(3) = 1e-082
Identities = 67/98 (68%), Positives = 83/98 (84%)
Frame = -2 / +3
Query: 903 VVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVA 724
VV+ID +EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV
Sbjct: 3 VVTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTL 182
Query: 723 VGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
VGYG+E+GKDYWIV+NSWG WGE G+IR++RN+ ++
Sbjct: 183 VGYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNIEGAS 296
Score = 121 bits (259), Expect(3) = 1e-082
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 402 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 581
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 582 KSRKDPFGTKMLKRTPAK 635
Score = 70.7 bits (148), Expect(3) = 3e-025
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 284 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 105
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 104 AGFDGNAN 81
Score = 49.2 bits (101), Expect(3) = 3e-025
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -1
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 634 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 455
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 454 YMQQQVLLSGQE 419
Score = 43.7 bits (89), Expect(3) = 1e-082
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 291 ASTGMCGIAMEASYPVKKGSN 353
Score = 34.1 bits (68), Expect(3) = 3e-025
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 346 PFFTGYDASIAIPHIPVEA 290
>gb|DR177175.1|DR177175 RTMNUT1_3_C10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_3_C10_A029 5', mRNA sequence
Length = 733
Score = 177 bits (381), Expect(3) = 3e-082
Identities = 66/94 (70%), Positives = 81/94 (86%)
Frame = -2 / +1
Query: 903 VVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVA 724
VV+ID +EDVPENDEKSL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV
Sbjct: 1 VVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTL 180
Query: 723 VGYGAENGKDYWIVRNSWGPKWGEAGYIRMERNV 622
VGYG+E+G DYWIV+NSWG WGE G+IR++RN+
Sbjct: 181 VGYGSESGTDYWIVKNSWGKSWGEEGFIRLQRNI 282
Score = 123 bits (264), Expect(3) = 3e-082
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = -2 / +1
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP++ ATCC DH SCCP YPVC++ GTC
Sbjct: 400 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 579
Query: 324 VSKNSPLSVKALKRTLAK 271
S VK LKRT AK
Sbjct: 580 QSSKDSFGVKMLKRTPAK 633
Score = 84.5 bits (178), Expect(3) = 2e-032
Identities = 37/94 (39%), Positives = 53/94 (56%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D + L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 282 NVPLQSDESLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPP 103
Query: 802 TGLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHN 903
G +GNANW HIF ID H+
Sbjct: 102 AGFDGNANWLISRSLLQRFFIVFRHIFVVIDCHH 1
Score = 59.3 bits (123), Expect(3) = 2e-032
Identities = 37/67 (55%), Positives = 38/67 (56%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF T + LL QVP QTG GQQL *S QQVA S GQQPQ Q K
Sbjct: 632 LAGVRFSIFTPNESLLLWRQVPPSRSQTGYSLGQQL**SSQQVAESRGQQPQA*Q*PPKS 453
Query: 452 NAQQQVL 472
QQQVL
Sbjct: 452 YMQQQVL 432
Score = 44.6 bits (91), Expect(3) = 3e-082
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2 / +1
Query: 621 NASTGKCGIAMMASYPTKKGAN 556
+ASTG CGIAM ASYP KKGAN
Sbjct: 286 DASTGICGIAMEASYPVKKGAN 351
Score = 34.5 bits (69), Expect(3) = 2e-032
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 347 APFFTG*DASIAIPQIPVEA 288
>gb|CO167863.1|CO167863 FLD1_71_E11.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_71_E11_A029 5', mRNA sequence
Length = 730
Score = 180 bits (387), Expect(3) = 4e-082
Identities = 66/97 (68%), Positives = 82/97 (84%)
Frame = -2 / +1
Query: 900 VSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAV 721
V+ID +EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV V
Sbjct: 4 VTIDSYEDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLV 183
Query: 720 GYGAENGKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
GYG+E+GKDYWIV+NSWG WGE G+IR++RN+ ++
Sbjct: 184 GYGSESGKDYWIVKNSWGKSWGEKGFIRLQRNIEGAS 294
Score = 121 bits (259), Expect(3) = 4e-082
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +1
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 400 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 579
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 580 KSRKDPFGTKMLKRTPAK 633
Score = 70.7 bits (148), Expect(3) = 3e-025
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 282 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 103
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 102 AGFDGNAN 79
Score = 49.2 bits (101), Expect(3) = 3e-025
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 632 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 453
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 452 YMQQQVLLSGQE 417
Score = 43.7 bits (89), Expect(3) = 4e-082
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 289 ASTGMCGIAMEASYPVKKGSN 351
Score = 34.1 bits (68), Expect(3) = 3e-025
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 344 PFFTGYDASIAIPHIPVEA 288
>gb|DR102486.1|DR102486 STRR1_81_B04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_81_B04_A033 5', mRNA sequence
Length = 621
Score = 266 bits (575), Expect(3) = 7e-081
Identities = 100/143 (69%), Positives = 118/143 (82%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 63 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 242
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWIV+
Sbjct: 243 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWIVK 422
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE G+IR++RN+ ++
Sbjct: 423 NSWGKSWGEKGFIRLQRNIEGAS 491
Score = 70.7 bits (148), Expect(3) = 1e-026
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 479 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 300
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 299 AGFDGNAN 276
Score = 56.5 bits (117), Expect(3) = 1e-026
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -2
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 227 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 84
Score = 42.3 bits (86), Expect(3) = 7e-081
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGI+M ASYP KKG+N
Sbjct: 486 ASTGMCGISMEASYPVKKGSN 548
Score = 32.7 bits (65), Expect(3) = 7e-081
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 1101 VTGEMVTLSEQELVECST 1048
VTG + +LSEQELV+C T
Sbjct: 3 VTGNLTSLSEQELVDCDT 56
Score = 31.3 bits (62), Expect(3) = 1e-026
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA I IPH PV A
Sbjct: 541 PFFTGYDASIDIPHIPVEA 485
>gb|CX652206.1|CX652206 COLD1_57_D09.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_57_D09_A029 5', mRNA sequence
Length = 718
Score = 203 bits (438), Expect(2) = 2e-080
Identities = 80/109 (73%), Positives = 89/109 (81%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 390 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRKNAHVVTIDSYEDVPENDE 569
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYG 712
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG
Sbjct: 570 KSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYG 716
Score = 117 bits (250), Expect(2) = 2e-080
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -2 / +3
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E LPESVDWREKGAVA VK+QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 204 ENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 383
Score = 56.5 bits (117), Expect(3) = 2e-024
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +1 / -3
Query: 874 HIFKAIDAHNPGIFPVHVALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
HIF AI+ H+ GIF V V + G VRV+I + V+YD++ES +HE
Sbjct: 554 HIFVAINCHHMGIFSVSVTAAIVGHVRVIILTVKPTVVYDKLESIIHE 411
Score = 51.5 bits (106), Expect(3) = 2e-024
Identities = 24/50 (48%), Positives = 24/50 (48%)
Frame = +2 / -1
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPFXXXXXXXXXXXXXXXW 1243
PVTI L ST T E AQQLP PW LT ATAPF W
Sbjct: 337 PVTI*LMPSTAATVENAQQLPQEPWSLTAATAPFSLQSTDSGKFSPSEYW 188
Score = 42.8 bits (87), Expect(3) = 2e-024
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1 / -3
Query: 724 RDDTMVKVRGAASAEDTRFVELELPATGLNGNAN 825
+ DT+V++ A + E RFV+LE P+ G +GNAN
Sbjct: 704 QSDTVVQLSSAGACEHARFVKLERPSAGFDGNAN 603
>gb|DT626537.1|DT626537 EST1158461 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone PIMAB87 5' end, mRNA sequence
Length = 967
Score = 171 bits (369), Expect(3) = 1e-079
Identities = 63/91 (69%), Positives = 77/91 (84%)
Frame = -2 / +3
Query: 882 EDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAEN 703
EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+
Sbjct: 3 EDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 182
Query: 702 GKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
GKDYWIV+NSWG WGE G+IR++RN+ ++
Sbjct: 183 GKDYWIVKNSWGKSWGEKGFIRLQRNIEGAS 275
Score = 121 bits (259), Expect(3) = 1e-079
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 381 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 560
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 561 KSRKDPFGTKMLKRTPAK 614
Score = 70.7 bits (148), Expect(3) = 3e-025
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 263 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 84
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 83 AGFDGNAN 60
Score = 49.2 bits (101), Expect(3) = 3e-025
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -1
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 613 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 434
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 433 YMQQQVLLSGQE 398
Score = 43.7 bits (89), Expect(3) = 1e-079
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 270 ASTGMCGIAMEASYPVKKGSN 332
Score = 34.1 bits (68), Expect(3) = 3e-025
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 325 PFFTGYDASIAIPHIPVEA 269
>gb|CV136191.1|CV136191 EST847400 Sequencing ESTs from loblolly pine embryos Pinus taeda
cDNA clone RPIA832 5' end, mRNA sequence
Length = 939
Score = 171 bits (369), Expect(3) = 1e-079
Identities = 63/91 (69%), Positives = 77/91 (84%)
Frame = -2 / +3
Query: 882 EDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAEN 703
EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+
Sbjct: 3 EDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 182
Query: 702 GKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
GKDYWIV+NSWG WGE G+IR++RN+ ++
Sbjct: 183 GKDYWIVKNSWGKSWGEKGFIRLQRNIEGAS 275
Score = 121 bits (259), Expect(3) = 1e-079
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 381 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 560
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 561 KSRKDPFGTKMLKRTPAK 614
Score = 70.7 bits (148), Expect(3) = 3e-025
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 263 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 84
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 83 AGFDGNAN 60
Score = 49.2 bits (101), Expect(3) = 3e-025
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 613 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 434
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 433 YMQQQVLLSGQE 398
Score = 43.7 bits (89), Expect(3) = 1e-079
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 270 ASTGMCGIAMEASYPVKKGSN 332
Score = 34.1 bits (68), Expect(3) = 3e-025
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 325 PFFTGYDASIAIPHIPVEA 269
>gb|DR180554.1|DR180554 RTMNUT1_33_H11.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_33_H11_A029 3', mRNA sequence
Length = 832
Score = 193 bits (415), Expect(2) = 1e-078
Identities = 75/103 (72%), Positives = 87/103 (84%)
Frame = -2 / -3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF+FII NGG+D+E+DYPY A DG CD RKNA VV+ID +EDVPENDE
Sbjct: 314 NQGCNGGLMDYAFEFIINNGGLDSEEDYPYTAYDGSCDAYRKNAHVVTIDDYEDVPENDE 135
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGV 730
KSL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV
Sbjct: 134 KSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGV 6
Score = 121 bits (259), Expect(2) = 1e-078
Identities = 44/60 (73%), Positives = 56/60 (93%)
Frame = -2 / -3
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E+LP+S+DWREKGAVAPVK+QG CGSCWAFS V++VE +NQIVTG++++LSEQELV+C T
Sbjct: 500 EDLPKSIDWREKGAVAPVKDQGACGSCWAFSTVAAVEGINQIVTGDLISLSEQELVDCDT 321
Score = 92.3 bits (195), Expect(2) = 3e-029
Identities = 37/88 (42%), Positives = 52/88 (59%)
Frame = +1 / +3
Query: 754 AASAEDTRFVELELPATGLNGNANWXXXXXXXXXXXXXXXHIFKAIDAHNPGIFPVHVAL 933
A ++E TRFV+LELP G +GNANW HIF ID H+ GIFPV V
Sbjct: 30 AGASEHTRFVKLELPPAGFDGNANWLISRSLLQRFFIVFRHIFVVIDCHHMGIFPVSVT* 209
Query: 934 PVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
+ G V V++ + + ++YD++ES +HE
Sbjct: 210 SIVGRVGVILLAVKSTIVYDKLESVIHE 293
Score = 74.8 bits (157), Expect(2) = 3e-021
Identities = 42/99 (42%), Positives = 48/99 (48%)
Frame = +2 / +1
Query: 737 WSRFVVQLPLKTPDL*SWNSRPPASMATLTGW*ATAXXXXXXXXXXXXXXXXMLTTLAFF 916
WS +V Q + TPD *+WNS P ASMATL G A A ++TT AFF
Sbjct: 13 WSSWVPQALVNTPDS*NWNSLPLASMATLIG*LAAAFFNDFSSFSGTSS*SSIVTTWAFF 192
Query: 917 LFMSHFPSTAL*GXXXXXXXXXXXXXXXKAASMSPPLQP 1033
L SH PS A+*G KA SM PPL P
Sbjct: 193 L*ASHDPS*AV*G*SSSLSSPPLFMINSKA*SMRPPLHP 309
Score = 57.4 bits (119), Expect(2) = 3e-029
Identities = 24/34 (70%), Positives = 24/34 (70%)
Frame = +2 / +1
Query: 1094 PVTIWLTLSTELTAEKAQQLPHCPWFLTGATAPF 1195
PVTI L ST T E AQQLPH PW TGATAPF
Sbjct: 367 PVTI*LIPSTAATVENAQQLPHAPWSFTGATAPF 468
Score = 47.8 bits (98), Expect(2) = 3e-021
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = +1 / +3
Query: 1057 LYELLFRQCHHLTGDDLVNAFH*AYCRESPATSALPLVLDGRDGALLPPVDALRQLLGGA 1236
+++ L Q + + G DL+++F+ + E P TS LVL G+L PV+ L Q+L
Sbjct: 330 VHQFLLGQRNQIAGHDLIDSFNGRHS*ERPTTSTCTLVLHRSHGSLFSPVNGLWQILAVG 509
Query: 1237 VVAVPSTRP 1263
++ + RP
Sbjct: 510 ILVSRAGRP 536
>gb|CF398437.1|CF398437 RTDS3_12_E06.g1_A022 Drought-stressed loblolly pine roots DS3 Pinus
taeda cDNA clone RTDS3_12_E06_A022 5', mRNA sequence
Length = 605
Score = 167 bits (360), Expect(3) = 2e-078
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = -2 / +2
Query: 882 EDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAEN 703
EDVPENDEKSL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+
Sbjct: 2 EDVPENDEKSLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSES 181
Query: 702 GKDYWIVRNSWGPKWGEAGYIRMERNV 622
G DYWIV+NSWG WGE G+IR++RN+
Sbjct: 182 GTDYWIVKNSWGKSWGEEGFIRLQRNI 262
Score = 121 bits (258), Expect(3) = 2e-078
Identities = 40/75 (53%), Positives = 47/75 (62%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP++ ATCC DH SCCP YPVC++ GTC
Sbjct: 380 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 559
Query: 324 VSKNSPLSVKALKRT 280
S VK LKRT
Sbjct: 560 QSSKDSFGVKMLKRT 604
Score = 76.7 bits (161), Expect(3) = 2e-029
Identities = 34/87 (39%), Positives = 49/87 (56%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D + L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 262 NVPLQSDESLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPP 83
Query: 802 TGLNGNANWXXXXXXXXXXXXXXXHIF 882
G +GNANW HIF
Sbjct: 82 AGFDGNANWLISRSLLQRFLIVFRHIF 2
Score = 56.5 bits (117), Expect(3) = 2e-029
Identities = 35/64 (54%), Positives = 36/64 (56%)
Frame = +2 / -3
Query: 281 VRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKPNAQ 460
VRF T + LL QVP QTG GQQL *S QQVA S GQQPQ Q K Q
Sbjct: 603 VRFSIFTPNESLLLWRQVPPSRSQTGYSLGQQL**SSQQVAESRGQQPQA*Q*PPKSYMQ 424
Query: 461 QQVL 472
QQVL
Sbjct: 423 QQVL 412
Score = 44.6 bits (91), Expect(3) = 2e-078
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2 / +2
Query: 621 NASTGKCGIAMMASYPTKKGAN 556
+ASTG CGIAM ASYP KKGAN
Sbjct: 266 DASTGICGIAMEASYPVKKGAN 331
Score = 34.5 bits (69), Expect(3) = 2e-029
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 327 APFFTG*DASIAIPQIPVEA 268
>gb|DR743712.1|DR743712 RTCU1_17_E09.g1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_17_E09_A029 5', mRNA sequence
Length = 863
Score = 167 bits (360), Expect(3) = 2e-078
Identities = 62/91 (68%), Positives = 76/91 (83%)
Frame = -2 / +3
Query: 882 EDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAEN 703
EDVPENDEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+
Sbjct: 3 EDVPENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSES 182
Query: 702 GKDYWIVRNSWGPKWGEAGYIRMERNVNAST 610
G DYWIV+NSWG WGE G+IR++RN+ ++
Sbjct: 183 G*DYWIVKNSWGKSWGEKGFIRLQRNIEGAS 275
Score = 121 bits (259), Expect(3) = 2e-078
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 381 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 560
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 561 KSRKDPFGTKMLKRTPAK 614
Score = 72.5 bits (152), Expect(3) = 8e-026
Identities = 29/68 (42%), Positives = 45/68 (66%)
Frame = +1 / -1
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++L L + + DT+V++ A + E RFV+LE P+
Sbjct: 263 NVPLQSDETLLSPALSPRILHNPIILAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 84
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 83 AGFDGNAN 60
Score = 49.2 bits (101), Expect(3) = 8e-026
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -2
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 613 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 434
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 433 YMQQQVLLSGQE 398
Score = 43.7 bits (89), Expect(3) = 2e-078
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 270 ASTGMCGIAMEASYPVKKGSN 332
Score = 34.1 bits (68), Expect(3) = 8e-026
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -2
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 325 PFFTGYDASIAIPHIPVEA 269
>gb|CX714408.1|CX714408 RTPQ1_22_A12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_22_A12_A032 3', mRNA sequence
Length = 789
Score = 118 bits (252), Expect(4) = 2e-077
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = -2 / +3
Query: 918 RKNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLD 739
+ NA +IDGFEDVP N+EK+L++AV HQPV+VAIEA G++FQ Y GVF+G C T LD
Sbjct: 246 KPNAIAATIDGFEDVPANNEKALKEAVGHQPVAVAIEASGKDFQFYSKGVFTGECGTELD 425
Query: 738 HGVVAVGYG 712
HGVVAVGYG
Sbjct: 426 HGVVAVGYG 452
Score = 95.9 bits (203), Expect(4) = 2e-077
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -2 / +3
Query: 702 GKDYWIVRNSWGPKWGEAGYIRMERNVNASTGKCGIAMMASYPTKK 565
G +YWIVRNSWGP+WGE GYI+M+R++ A GKCGIAM ASYPTKK
Sbjct: 465 GINYWIVRNSWGPEWGEEGYIKMQRDIEAVEGKCGIAMQASYPTKK 602
Score = 67.5 bits (141), Expect(4) = 2e-077
Identities = 23/39 (58%), Positives = 34/39 (87%)
Frame = -2 / +3
Query: 1161 QCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTD 1045
QCGSCWAFS ++SVE ++ + TG++V+LSEQ+LV+CS +
Sbjct: 3 QCGSCWAFSTIASVEGISYLKTGKLVSLSEQQLVDCSKE 119
Score = 66.6 bits (139), Expect(4) = 2e-077
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVS 895
N+GCNGGLMD+AF +II NGG+ ED+YPY A +C ++ ++
Sbjct: 120 NAGCNGGLMDSAFQYIIDNGGVVAEDEYPYTAEASECSPSKVKPNAIA 263
>gb|DR069530.1|DR069530 RTDK1_7_F12.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_7_F12_A029 5', mRNA sequence
Length = 816
Score = 279 bits (604), Expect(2) = 7e-077
Identities = 112/191 (58%), Positives = 135/191 (70%)
Frame = -2 / -3
Query: 1185 VAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTDGGNSGCNGGLMDA 1006
V PVK+QGQCGSCWAFS SVE +QI TG +V+LSEQ+LV+CS GN GCNGGLMD
Sbjct: 814 VTPVKDQGQCGSCWAFSTTGSVEGAHQIKTGSLVSLSEQQLVDCSGSEGNQGCNGGLMDY 635
Query: 1005 AFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDEKSLQKAVAHQP 826
AF++IIKN GI TE +Y Y A DG C+ ++ ++ +I ++DV N E L+ AV QP
Sbjct: 634 AFEYIIKNKGITTEANYAYTARDGVCNRSKASSAAATITSYKDVTHNSEAQLKAAVTQQP 455
Query: 825 VSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVRNSWGPKWGEAG 646
VSVAIEA FQ YKSG+FSG C T LDHGV+AVGYG E DYWIV+NSWG WG G
Sbjct: 454 VSVAIEADQSGFQFYKSGIFSGPCGTQLDHGVLAVGYGTEGTTDYWIVKNSWGVSWGSQG 275
Query: 645 YIRMERNVNAS 613
YI M + A+
Sbjct: 274 YILMAQGKGAT 242
Score = 68.0 bits (142), Expect(2) = 1e-022
Identities = 32/75 (42%), Positives = 43/75 (57%)
Frame = +1 / +2
Query: 601 ALPSAGVNVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRF 780
A ++G H DV AP APRV DDPVV L + + +DT+V++ A + ED R
Sbjct: 230 AAQTSGALALSHQDVALRAPGDAPRVLDDPVVGGSLSTITNSEDTVVQLGAAGAGEDARL 409
Query: 781 VELELPATGLNGNAN 825
VELE GLNG+ +
Sbjct: 410 VELEARLVGLNGDGD 454
Score = 59.7 bits (124), Expect(2) = 1e-022
Identities = 38/87 (43%), Positives = 43/87 (49%)
Frame = +1 / +2
Query: 925 VALPVHGSVRVVIFGIDAPVLYDEIESGVHEXXXXXXXXXXXRALYELLFRQCHHLTGDD 1104
VA + GSV VV G D VL D +E VH+ RA+ ELL Q G D
Sbjct: 554 VADAIAGSVGVVGLGGDTLVLDDVLEGVVHQATVAALVALRARAVDELLLGQGDEGAGLD 733
Query: 1105 LVNAFH*AYCRESPATSALPLVLDGRD 1185
LV A ESPA +AL LVLDG D
Sbjct: 734 LVGTLDGAGGGESPARAALALVLDGGD 814
Score = 29.5 bits (58), Expect(2) = 7e-077
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -3
Query: 615 STGKCGIAMMASYP 574
+TG CGIAM ASYP
Sbjct: 247 ATGLCGIAMEASYP 206
>gb|DR179208.1|DR179208 RTMNUT1_16_E04.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_E04_A029 5', mRNA sequence
Length = 723
Score = 115 bits (246), Expect(4) = 9e-077
Identities = 45/68 (66%), Positives = 55/68 (80%)
Frame = -2 / +1
Query: 915 KNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDH 736
++ + IDGFEDVP N+E +L+KAVAHQPVSVAIEA G++FQ Y +GVF+G C T LDH
Sbjct: 445 ESTKTTIIDGFEDVPANNEAALKKAVAHQPVSVAIEASGQDFQFYSTGVFTGKCGTKLDH 624
Query: 735 GVVAVGYG 712
GVV VGYG
Sbjct: 625 GVVVVGYG 648
Score = 114 bits (243), Expect(4) = 9e-077
Identities = 42/62 (67%), Positives = 54/62 (87%)
Frame = -2 / +1
Query: 1230 AEELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECS 1051
++ LP S+DWR+KGAV PVKNQGQCGSCWAFS V+SVE +N I TG++V+LSEQ+LV+CS
Sbjct: 133 SKHLPASIDWRKKGAVTPVKNQGQCGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCS 312
Query: 1050 TD 1045
+
Sbjct: 313 KE 318
Score = 63.8 bits (133), Expect(4) = 9e-077
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2 / +1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNR 916
N+GCNGGLMD AF +II NGGI +E++YPY A +C +
Sbjct: 319 NAGCNGGLMDNAFQYIIDNGGIVSEEEYPYTAEASECSTTK 441
Score = 52.4 bits (108), Expect(4) = 9e-077
Identities = 17/21 (80%), Positives = 19/21 (90%)
Frame = -2 / +1
Query: 702 GKDYWIVRNSWGPKWGEAGYI 640
G +YWIVRNSWGP+WGE GYI
Sbjct: 661 GINYWIVRNSWGPEWGEKGYI 723
>gb|CF402920.1|CF402920 RTWW1_23_E10.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_23_E10_A015 5', mRNA sequence
Length = 735
Score = 160 bits (345), Expect(3) = 2e-076
Identities = 59/87 (67%), Positives = 72/87 (82%)
Frame = -2 / +3
Query: 870 ENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDY 691
ENDEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDY
Sbjct: 3 ENDEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDY 182
Query: 690 WIVRNSWGPKWGEAGYIRMERNVNAST 610
WIV+NSWG WGE G+IR+ RN+ ++
Sbjct: 183 WIVKNSWGKSWGEKGFIRLHRNIEGAS 263
Score = 121 bits (259), Expect(3) = 2e-076
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +3
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 369 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 548
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 549 KSRKDPFGTKMLKRTPAK 602
Score = 69.3 bits (145), Expect(3) = 7e-025
Identities = 27/68 (39%), Positives = 44/68 (64%)
Frame = +1 / -2
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVP+ +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 251 NVPVQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 72
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 71 AGFDGNAN 48
Score = 49.2 bits (101), Expect(3) = 7e-025
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 601 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 422
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 421 YMQQQVLLSGQE 386
Score = 43.7 bits (89), Expect(3) = 2e-076
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +3
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 258 ASTGMCGIAMEASYPVKKGSN 320
Score = 34.1 bits (68), Expect(3) = 7e-025
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -3
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 313 PFFTGYDASIAIPHIPVEA 257
>gb|DR179132.1|DR179132 RTMNUT1_16_E04.b1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_16_E04_A029 3', mRNA sequence
Length = 869
Score = 115 bits (246), Expect(4) = 3e-076
Identities = 45/68 (66%), Positives = 55/68 (80%)
Frame = -2 / +1
Query: 915 KNARVVSIDGFEDVPENDEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDH 736
++ + IDGFEDVP N+E +L+KAVAHQPVSVAIEA G++FQ Y +GVF+G C T LDH
Sbjct: 244 ESTKTTIIDGFEDVPANNEAALKKAVAHQPVSVAIEASGQDFQFYSTGVFTGKCGTKLDH 423
Query: 735 GVVAVGYG 712
GVV VGYG
Sbjct: 424 GVVVVGYG 447
Score = 93.6 bits (198), Expect(4) = 3e-076
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -2 / +1
Query: 702 GKDYWIVRNSWGPKWGEAGYIRMERNVNASTGKCGIAMMASYPTKK 565
G +YWIVRNSWGP+WGE GYI+M++ + A GKCGIAM ASYPTKK
Sbjct: 460 GINYWIVRNSWGPEWGEKGYIKMQQGIKAVEGKCGIAMQASYPTKK 597
Score = 71.2 bits (149), Expect(4) = 3e-076
Identities = 26/39 (66%), Positives = 34/39 (87%)
Frame = -2 / +1
Query: 1161 QCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTD 1045
QCGSCWAFS V+SVE +N I TG++V+LSEQ+LV+CS +
Sbjct: 1 QCGSCWAFSTVASVEGINYIKTGKLVSLSEQQLVDCSKE 117
Score = 63.8 bits (133), Expect(4) = 3e-076
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = -2 / +1
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNR 916
N+GCNGGLMD AF +II NGGI +E++YPY A +C +
Sbjct: 118 NAGCNGGLMDNAFQYIIDNGGIVSEEEYPYTAEASECSTTK 240
Score = 49.6 bits (102), Expect(4) = 1e-021
Identities = 23/42 (54%), Positives = 26/42 (61%)
Frame = +2 / -1
Query: 566 FFVG*DAIIAIPHFPVLALTFLSIRM*PASPHFGPHELRTIQ 691
F VG +A +AIPHFP AL I + P SPH GP E TIQ
Sbjct: 596 FLVGYEACMAIPHFPSTALIPCCIFIYPFSPHSGPQEFLTIQ 471
Score = 44.1 bits (90), Expect(4) = 1e-021
Identities = 22/36 (61%), Positives = 24/36 (66%)
Frame = +2 / -1
Query: 737 WSRFVVQLPLKTPDL*SWNSRPPASMATLTGW*ATA 844
WS V LP+ TP *+W S P ASMAT TG *ATA
Sbjct: 422 WSSLVPHLPVNTPVE*NWKS*PLASMATDTG**ATA 315
Score = 33.1 bits (66), Expect(4) = 1e-021
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / -1
Query: 1094 PVTIWLTLSTELTAEKAQQLPH 1159
PV I L STE T E AQQLPH
Sbjct: 68 PVLI*LMPSTEATVENAQQLPH 3
Score = 31.3 bits (62), Expect(4) = 1e-021
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1 / -3
Query: 928 ALPVHGSVRVVIFGIDAPVLYDEIESGVHE 1017
AL GSVR++ F D ++YD +E +H+
Sbjct: 228 ALARFGSVRILFFTNDPAIIYDILEGVIHK 139
>gb|CF390910.1|CF390910 RTDR3_2_D03.g1_A022 Loblolly pine roots recovering from drought DR3
Pinus taeda cDNA clone RTDR3_2_D03_A022 5', mRNA
sequence
Length = 611
Score = 156 bits (336), Expect(3) = 4e-075
Identities = 57/85 (67%), Positives = 71/85 (83%)
Frame = -2 / +1
Query: 864 DEKSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWI 685
DEKSL+KA AHQP+SVAIEA GR FQ Y+SGVF+ +C T LDHGV VGYG+E+GKDYWI
Sbjct: 1 DEKSLKKAAAHQPISVAIEASGRAFQFYESGVFTSTCGTQLDHGVTLVGYGSESGKDYWI 180
Query: 684 VRNSWGPKWGEAGYIRMERNVNAST 610
V+NSWG WGE G+IR++RN+ ++
Sbjct: 181 VKNSWGKSWGEKGFIRLQRNIEGAS 255
Score = 121 bits (259), Expect(3) = 4e-075
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2 / +1
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP+ ATCC DH SCCP +PVC++ A TC
Sbjct: 361 VCDNYYSCPESNTCCCMYDFGGYCYAWGCCPLNSATCCDDHYSCCPNDHPVCDLDAQTCL 540
Query: 324 VSKNSPLSVKALKRTLAK 271
S+ P K LKRT AK
Sbjct: 541 KSRKDPFGTKMLKRTPAK 594
Score = 70.7 bits (148), Expect(3) = 3e-025
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +1 / -3
Query: 622 NVPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPA 801
NVPL +D T L+P +PR+ +P++ L + + DT+V++ A + E RFV+LE P+
Sbjct: 243 NVPLQSDETLLSPALSPRILHNPIIFAGL*TIPYQSDTVVQLSSAGACEHARFVKLERPS 64
Query: 802 TGLNGNAN 825
G +GNAN
Sbjct: 63 AGFDGNAN 40
Score = 49.2 bits (101), Expect(3) = 3e-025
Identities = 34/72 (47%), Positives = 36/72 (50%)
Frame = +2 / -1
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF +G L V A QTG* GQQL *S Q VA GQQP Q K
Sbjct: 593 LAGVRFSIFVPNGSLRLLRHVCASRSQTG*SLGQQL**SSQHVAELRGQQPHA*Q*PPKS 414
Query: 452 NAQQQVLPAEHE 487
QQQVL + E
Sbjct: 413 YMQQQVLLSGQE 378
Score = 43.7 bits (89), Expect(3) = 4e-075
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2 / +1
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKG+N
Sbjct: 250 ASTGMCGIAMEASYPVKKGSN 312
Score = 34.1 bits (68), Expect(3) = 3e-025
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = +2 / -1
Query: 563 PFFVG*DAIIAIPHFPVLA 619
PFF G DA IAIPH PV A
Sbjct: 305 PFFTGYDASIAIPHIPVEA 249
>gb|DR178895.1|DR178895 RTMNUT1_14_D10.g1_A029 Roots minus micronutrients Pinus taeda cDNA
clone RTMNUT1_14_D10_A029 5', mRNA sequence
Length = 731
Score = 145 bits (312), Expect(3) = 1e-072
Identities = 53/83 (63%), Positives = 69/83 (83%)
Frame = -2 / +2
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSCTTNLDHGVVAVGYGAENGKDYWIVR 679
+SL+KA A+QP+SVAIEA GREFQ Y+SGVF+ +C T LDHGV VGYG+E+G DYWIV+
Sbjct: 5 ESLKKAAANQPISVAIEASGREFQFYESGVFTSACGTQLDHGVTLVGYGSESGTDYWIVK 184
Query: 678 NSWGPKWGEAGYIRMERNVNAST 610
NSWG WGE GYI+++RN+ ++
Sbjct: 185 NSWGKSWGEEGYIKLQRNLEEAS 253
Score = 123 bits (264), Expect(3) = 1e-072
Identities = 42/78 (53%), Positives = 49/78 (62%)
Frame = -2 / +2
Query: 504 VCDENFSCSAGSTCCCAFGFRNVCLVWGCCPVEGATCCKDHASCCPPGYPVCNVRAGTCS 325
VCD +SC +TCCC + F C WGCCP++ ATCC DH SCCP YPVC++ GTC
Sbjct: 359 VCDNYYSCPQSNTCCCMYDFGGYCYAWGCCPLDSATCCDDHYSCCPSEYPVCDLDGGTCL 538
Query: 324 VSKNSPLSVKALKRTLAK 271
S VK LKRT AK
Sbjct: 539 QSSKDSFGVKMLKRTPAK 592
Score = 73.0 bits (153), Expect(3) = 5e-029
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +1 / -2
Query: 625 VPLHTDVTSLAPLRAPRVADDPVVLPVLGAVADRDDTMVKVRGAASAEDTRFVELELPAT 804
VPL DV+ L+P +PR+ ++PVV L +A + +V + A ++E TRFV+LELP
Sbjct: 238 VPLQFDVSLLSPALSPRILNNPVVCARL*PIAHQSHAVV*LGSAGASEHTRFVKLELPPA 59
Query: 805 GLNGNANW 828
G +GNANW
Sbjct: 58 GFDGNANW 35
Score = 59.3 bits (123), Expect(3) = 5e-029
Identities = 37/67 (55%), Positives = 38/67 (56%)
Frame = +2 / -3
Query: 272 LARVRFKALTLSGLFLLTEQVPALTLQTG*PGGQQLA*SLQQVAPSTGQQPQTKQTFLKP 451
LA VRF T + LL QVP QTG GQQL *S QQVA S GQQPQ Q K
Sbjct: 591 LAGVRFSIFTPNESLLLWRQVPPSRSQTGYSLGQQL**SSQQVAESRGQQPQA*Q*PPKS 412
Query: 452 NAQQQVL 472
QQQVL
Sbjct: 411 YMQQQVL 391
Score = 44.1 bits (90), Expect(3) = 1e-072
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2 / +2
Query: 618 ASTGKCGIAMMASYPTKKGAN 556
ASTG CGIAM ASYP KKGAN
Sbjct: 248 ASTGICGIAMEASYPVKKGAN 310
Score = 34.5 bits (69), Expect(3) = 5e-029
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 560 APFFVG*DAIIAIPHFPVLA 619
APFF G*DA IAIP PV A
Sbjct: 306 APFFTG*DASIAIPQIPVEA 247
>gb|CO164051.1|CO164051 FLD1_45_B05.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_45_B05_A029 5', mRNA sequence
Length = 905
Score = 175 bits (377), Expect(2) = 4e-072
Identities = 69/95 (72%), Positives = 77/95 (81%)
Frame = -2 / +3
Query: 1038 NSGCNGGLMDAAFDFIIKNGGIDTEDDYPYRAVDGKCDMNRKNARVVSIDGFEDVPENDE 859
N GCNGGLMD AF FII NGG+D+EDDYPY A DG CD R NA VV+ID +EDVPENDE
Sbjct: 618 NQGCNGGLMDYAFQFIIDNGGLDSEDDYPYMANDGSCDAYRXNAHVVTIDSYEDVPENDE 797
Query: 858 KSLQKAVAHQPVSVAIEAGGREFQLYKSGVFSGSC 754
KSL+KA AHQP+SVAIEA GR FQ Y+SGVF +C
Sbjct: 798 KSLKKAAAHQPISVAIEASGRAFQFYESGVFHSTC 902
Score = 117 bits (250), Expect(2) = 4e-072
Identities = 45/60 (75%), Positives = 52/60 (86%)
Frame = -2 / +3
Query: 1227 EELPESVDWREKGAVAPVKNQGQCGSCWAFSAVSSVESVNQIVTGEMVTLSEQELVECST 1048
E LPESVDWREKGAVA VK+QG CGSCWAFS V++VE +NQIVTG + +LSEQELV+C T
Sbjct: 432 ENLPESVDWREKGAVAAVKDQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT 611
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 561,372,034
Number of Sequences: 355925
Number of extensions: 7785650
Number of successful extensions: 52631
Number of sequences better than 1.0e-020: 662
length of database: 72,425,745
effective HSP length: 54
effective length of database: 53,205,795
effective search space used: 19473320970
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)