TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521569.2.1
(887 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CO165491.1|CO165491 FLD1_54_H04.g1_A029 Root flooded Pin... 376 e-103
gb|CX648234.1|CX648234 COLD1_27_H06.b1_A029 Root cold Pinus... 376 e-103
gb|CO361124.1|CO361124 NDL2_2_H09.g1_A029 Needles control 2... 371 e-102
gb|CO165781.1|CO165781 FLD1_57_B08.b1_A029 Root flooded Pin... 365 e-100
gb|CX648317.1|CX648317 COLD1_27_H06.g1_A029 Root cold Pinus... 365 e-100
gb|CF477415.1|CF477415 RTWW3_7_G07.g1_A022 Well-watered lob... 364 e-100
gb|CO200550.1|CO200550 GEO2_8_C12.b1_A032 Root gravitropism... 356 2e-097
gb|CO369603.1|CO369603 RTK1_48_F07.b1_A029 Roots minus pota... 347 5e-095
gb|CV034557.1|CV034557 RTNACL1_10_A06.b1_A029 Roots plus ad... 340 8e-093
gb|CV034621.1|CV034621 RTNACL1_10_A06.g1_A029 Roots plus ad... 337 7e-092
gb|DR056287.1|DR056287 RTCA1_29_F12.b1_A029 Roots minus cal... 331 3e-090
gb|CO368668.1|CO368668 RTK1_42_C01.b1_A029 Roots minus pota... 330 1e-089
gb|CF672241.1|CF672241 RTCNT1_62_G02.b1_A029 Root control P... 329 2e-089
gb|DR056364.1|DR056364 RTCA1_29_F12.g1_A029 Roots minus cal... 328 3e-089
gb|DR742450.1|DR742450 RTCU1_4_D01.b1_A029 Roots plus added... 328 3e-089
gb|DR120678.1|DR120678 RTMG1_31_F04.b1_A029 Roots minus mag... 325 4e-088
gb|CX713945.1|CX713945 RTPQ1_15_G12.b1_A032 Roots treated w... 315 3e-085
gb|CO368744.1|CO368744 RTK1_42_C01.g1_A029 Roots minus pota... 310 7e-084
gb|CO166187.1|CO166187 FLD1_60_A12.b1_A029 Root flooded Pin... 309 2e-083
gb|CF672326.1|CF672326 RTCNT1_62_G02.g1_A029 Root control P... 268 3e-081
gb|DR387675.1|DR387675 RTHG1_23_H11.b1_A029 Roots plus adde... 215 9e-081
gb|CF478695.1|CF478695 RTWW3_16_A03.g1_A022 Well-watered lo... 298 3e-080
gb|CF393159.1|CF393159 RTDR3_17_B10.g1_A022 Loblolly pine r... 289 2e-077
gb|CF470504.1|CF470504 RTDS1_13_D09.b1_A015 Drought-stresse... 288 3e-077
gb|BQ634357.1|BQ634357 NXRV067_H08_F NXRV (Nsf Xylem Root w... 286 2e-076
gb|BX249925.1|BX249925 BX249925 Pinus pinaster differenciat... 280 1e-074
gb|DR013276.1|DR013276 HEAT1_18_G05.b1_A029 Root at 37 C fo... 272 2e-072
gb|BF221274.1|BF221274 NXCI_156_G07_F NXCI (Nsf Xylem Compr... 271 5e-072
gb|CO169862.1|CO169862 NDL1_10_D06.b1_A029 Needles control ... 237 8e-062
gb|AI920150.1|AI920150 1680 Pine Lambda Zap Xylem library P... 221 1e-061
gb|BF220484.1|BF220484 NXCI_147_B05_F NXCI (Nsf Xylem Compr... 230 1e-059
gb|AA739773.1|AA739773 538 PtIFG2 Pinus taeda cDNA clone 88... 230 1e-059
gb|DR090523.1|DR090523 RTAL1_15_D10.g1_A029 Roots plus adde... 188 3e-058
gb|AW698003.1|AW698003 NXNV_079_D09_F Nsf Xylem Normal wood... 224 8e-058
gb|BQ654722.1|BQ654722 NXRV084_G12_F NXRV (Nsf Xylem Root w... 221 6e-057
gb|CO368658.1|CO368658 RTK1_42_B01.b1_A029 Roots minus pota... 217 1e-055
gb|BQ696330.1|BQ696330 NXPV_040_B04_F NXPV (Nsf Xylem Plani... 216 2e-055
gb|AW736869.1|AW736869 NXNV_083_H08_F Nsf Xylem Normal wood... 209 2e-053
gb|CF476401.1|CF476401 RTWW3_1_A12.b1_A022 Well-watered lob... 207 8e-053
gb|CF470607.1|CF470607 RTDS1_13_D09.g1_A015 Drought-stresse... 196 2e-049
gb|DR168719.1|DR168719 RTPHOS1_27_H08.b1_A029 Roots minus p... 188 4e-048
gb|CF393740.1|CF393740 RTDS2_1_A05.b1_A021 Drought-stressed... 187 9e-047
gb|BE496570.1|BE496570 NXCI_020_G05_F NXCI (Nsf Xylem Compr... 186 2e-046
gb|BE810198.1|BE810198 NXCI_061_C04_F NXCI (Nsf Xylem Compr... 181 6e-045
gb|BE520016.1|BE520016 NXCI_028_B08_F NXCI (Nsf Xylem Compr... 170 1e-041
gb|CO165410.1|CO165410 FLD1_54_H04.b1_A029 Root flooded Pin... 170 2e-041
gb|CO361058.1|CO361058 NDL2_2_H09.b1_A029 Needles control 2... 167 1e-040
gb|CF393839.1|CF393839 RTDS2_1_A05.g1_A021 Drought-stressed... 166 2e-040
gb|AW626638.1|AW626638 NXNV067G01 Nsf Xylem Normal wood Ver... 158 4e-038
gb|CF476510.1|CF476510 RTWW3_1_A12.g1_A022 Well-watered lob... 152 4e-036
gb|CF477362.1|CF477362 RTWW3_7_G07.b1_A022 Well-watered lob... 88 7e-036
gb|AW056602.1|AW056602 ST53C10 Pine TriplEx shoot tip libra... 138 7e-032
gb|DR180707.1|DR180707 RTMNUT1_34_G11.b1_A029 Roots minus m... 138 7e-032
gb|CO164434.1|CO164434 FLD1_48_A12.b1_A029 Root flooded Pin... 136 2e-031
gb|BM902723.1|BM902723 NXLV_073_D01_F NXLV (Nsf Xylem Late ... 132 3e-030
gb|CO164509.1|CO164509 FLD1_48_A12.g1_A029 Root flooded Pin... 100 5e-030
gb|CF391995.1|CF391995 RTDR3_12_D08.b1_A022 Loblolly pine r... 127 8e-029
gb|DR168796.1|DR168796 RTPHOS1_27_H08.g1_A029 Roots minus p... 80 2e-027
gb|BX678846.1|BX678846 BX678846 RS Pinus pinaster cDNA clon... 123 2e-027
gb|AI919971.1|AI919971 1501 Pine Lambda Zap Xylem library P... 100 2e-026
gb|BF220384.1|BF220384 NXCI_144_F07_F NXCI (Nsf Xylem Compr... 117 8e-026
gb|BQ198527.1|BQ198527 NXLV132_D12_F NXLV (Nsf Xylem Late w... 108 7e-023
>gb|CO165491.1|CO165491 FLD1_54_H04.g1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_H04_A029 5', mRNA sequence
Length = 815
Score = 376 bits (816), Expect = e-103
Identities = 149/221 (67%), Positives = 188/221 (85%)
Frame = -1 / -1
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 791 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 612
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCS 507
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS
Sbjct: 611 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCS 432
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGG 327
+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G
Sbjct: 431 VKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAG 252
Query: 326 VCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
+C+SSMGRP SY++A+AWKVL+D+D+ HC+ FMF+NWSF+*
Sbjct: 251 ICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 129
Score = 223 bits (482), Expect = 1e-057
Identities = 115/221 (52%), Positives = 138/221 (62%)
Frame = +1 / +1
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 130 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 309
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 310 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 489
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 490 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 669
Query: 745 TYCLAMAATLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
TY A+AAT SR+ S NW A+V+TDL +++ S + V
Sbjct: 670 TY*RAIAATFSRKWLS*VNWNAIVNTDLRFELVPESPDVLV 792
Score = 62.5 bits (130), Expect(3) = 5e-026
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +3 / +3
Query: 690 ARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*ELESNGQH*SCVAGAXXVTR 857
+RRSYCHG PL RC++ +L H C S V I +LE N QH S + VTR
Sbjct: 615 SRRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRSQIRAGARVTR 782
Score = 58.3 bits (121), Expect(3) = 5e-026
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +3 / +3
Query: 351 LLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRVR 530
LL+NL ++ + I V++ ++ +L+ NQ R QHVQ L+ + ++ L TAHD +
Sbjct: 276 LLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRTAHDCI* 455
Query: 531 VLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
++P+ FQ + + +++ VE VA +P + C
Sbjct: 456 MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKC 569
Score = 35.0 bits (70), Expect(3) = 5e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 195 TGFSHEGPVHEHEGKAVRGVVVAQD 269
T +SH+GP+H+HE AV V V Q+
Sbjct: 120 TEWSHKGPIHKHENDAVGTVFVIQN 194
>gb|CX648234.1|CX648234 COLD1_27_H06.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_H06_A029 3', mRNA sequence
Length = 802
Score = 376 bits (816), Expect = e-103
Identities = 149/221 (67%), Positives = 188/221 (85%)
Frame = -1 / -1
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 679 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 500
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCS 507
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS
Sbjct: 499 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCS 320
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGG 327
+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G
Sbjct: 319 VKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAG 140
Query: 326 VCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
+C+SSMGRP SY++A+AWKVL+D+D+ HC+ FMF+NWSF+*
Sbjct: 139 ICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 17
Score = 223 bits (482), Expect = 1e-057
Identities = 115/221 (52%), Positives = 138/221 (62%)
Frame = +1 / +3
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 18 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 197
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 198 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 377
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 378 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 557
Query: 745 TYCLAMAATLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
TY A+AAT SR+ S NW A+V+TDL +++ S + V
Sbjct: 558 TY*RAIAATFSRKWLS*VNWNAIVNTDLRFELVPESPDVLV 680
Score = 62.0 bits (129), Expect(3) = 7e-026
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +3 / +2
Query: 690 ARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*ELESNGQH*SCVAGAXXVTR 857
+RRSYCHG PL RC++ +L H C S V I +LE N QH S + +TR
Sbjct: 503 SRRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRSQIRAGARITR 670
Score = 58.3 bits (121), Expect(3) = 7e-026
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +3 / +2
Query: 351 LLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRVR 530
LL+NL ++ + I V++ ++ +L+ NQ R QHVQ L+ + ++ L TAHD +
Sbjct: 164 LLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRTAHDCI* 343
Query: 531 VLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
++P+ FQ + + +++ VE VA +P + C
Sbjct: 344 MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKC 457
Score = 35.0 bits (70), Expect(3) = 7e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / +2
Query: 195 TGFSHEGPVHEHEGKAVRGVVVAQD 269
T +SH+GP+H+HE AV V V Q+
Sbjct: 8 TEWSHKGPIHKHENDAVGTVFVIQN 82
>gb|CO361124.1|CO361124 NDL2_2_H09.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_2_H09_A029 5', mRNA sequence
Length = 826
Score = 371 bits (805), Expect = e-102
Identities = 147/203 (72%), Positives = 179/203 (88%)
Frame = -1 / +1
Query: 812 IAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTL 633
IAFQF++ENHLRE+VA+MARQYVR VVASVQRVAMA+APSR+G L + PG+PEA TL
Sbjct: 1 IAFQFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTL 180
Query: 632 ARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDML 453
ARW+ +SYRFH G ELLR +++ ++ LK LW HSD+IMCCSLK+ PVFTFANQAGLDML
Sbjct: 181 ARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDML 360
Query: 452 ETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAW 273
ETTL+ALQDISLEKILDD+GRK+ C++ +IMQQG+AYLP GVCVSSMGRP SY++A+AW
Sbjct: 361 ETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAW 540
Query: 272 KVLSDDDTPHCLAFMFVNWSFV* 204
KVL+D++ PHC+AFMF+NWSFV*
Sbjct: 541 KVLNDEENPHCIAFMFMNWSFV* 609
Score = 236 bits (510), Expect = 2e-061
Identities = 117/201 (58%), Positives = 127/201 (63%)
Frame = +1 / -3
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 605 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 426
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVH 567
P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+ SE C S F S+
Sbjct: 425 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 246
Query: 568 WVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLT 747
RSS P WNL*L A V ASG PG C P REGA AMATLCTDATT T
Sbjct: 245 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRT 66
Query: 748 YCLAMAATLSRR*FSYENWKA 810
Y AM AT SR+ FS NWKA
Sbjct: 65 Y*RAMDATFSRKWFSKVNWKA 3
Score = 76.7 bits (161), Expect(3) = 6e-025
Identities = 39/99 (39%), Positives = 57/99 (57%)
Frame = +3 / -2
Query: 348 ALLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRV 527
+LLHNL + A+ AIVVK L +L+ NQ HV+A L+ KGE+ LQG HD +
Sbjct: 465 SLLHNLSNI*AKAFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGI 286
Query: 528 RVLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
RV+P+ FQ L +R+++ +E V +P C+ C
Sbjct: 285 RVVPKCFQQRFIDLRIRSKKLYPQMESVTLTNPTCKGKC 169
Score = 50.1 bits (103), Expect(3) = 6e-025
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +3 / -2
Query: 675 KLSTNARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*ELESN 812
K+ T +RR HG PLH C++ +L HGC+ L *++ ELESN
Sbjct: 138 KM*TQSRRG*GHGNPLHGCYNTTHILTSHGCNILP*MVLKSELESN 1
Score = 25.4 bits (49), Expect(3) = 6e-025
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3 / -2
Query: 201 FSHEGPVHEHEGKAVRGVVVAQD 269
+S++GP+H+HE A+ ++ +D
Sbjct: 612 WSNKGPIHKHECYAMGIFLIIED 544
>gb|CO165781.1|CO165781 FLD1_57_B08.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_57_B08_A029 3', mRNA sequence
Length = 757
Score = 365 bits (791), Expect = e-100
Identities = 144/200 (72%), Positives = 176/200 (88%)
Frame = -1 / +1
Query: 803 QFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARW 624
QF++ENHLRE+VA+MARQYVR VVASVQRVAMA+APSR+G L + PG+PEA TLARW
Sbjct: 1 QFTFENHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARW 180
Query: 623 IGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETT 444
+ +SYRFH G ELLR +++ ++ LK LW HSD+IMCCSLK+ PVFTFANQAGLDMLETT
Sbjct: 181 VCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETT 360
Query: 443 LIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVL 264
L+ALQDISLEKILDD+GRK+ C++ +IMQQG+AYLP GVCVSSMGRP SY++A+AWKVL
Sbjct: 361 LVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVL 540
Query: 263 SDDDTPHCLAFMFVNWSFV* 204
+D++ PHC+AFMF+NWSFV*
Sbjct: 541 NDEENPHCIAFMFMNWSFV* 600
Score = 227 bits (490), Expect = 9e-059
Identities = 114/198 (57%), Positives = 124/198 (62%)
Frame = +1 / -3
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 596 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 417
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVH 567
P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+ SE C S F S+
Sbjct: 416 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 237
Query: 568 WVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLT 747
RSS P WNL*L A V ASG PG C P REGA AMATLCTDATT T
Sbjct: 236 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRT 57
Query: 748 YCLAMAATLSRR*FSYEN 801
Y AM AT SR+ FS N
Sbjct: 56 Y*RAMDATFSRKWFSKVN 3
Score = 79.0 bits (166), Expect(3) = 1e-023
Identities = 40/99 (40%), Positives = 58/99 (58%)
Frame = +3 / -2
Query: 348 ALLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRV 527
+LLHNL + A+ AIVVK L +L+ NQ HV+A L+ KGE+ LQG HD +
Sbjct: 456 SLLHNLSNI*AKAFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGI 277
Query: 528 RVLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
RV+P+ FQ L +R+++ S +E V +P C+ C
Sbjct: 276 RVVPKCFQQRFIDLRIRSKKLYSQMESVTLTNPTCKGKC 160
Score = 43.2 bits (88), Expect(3) = 1e-023
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +3 / -2
Query: 675 KLSTNARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*EL 803
K+ T +RR HG PLH C++ +L HGC+ L *++ EL
Sbjct: 129 KM*TQSRRG*GHGNPLHGCYNTTHILTSHGCNILP*MVLKSEL 1
Score = 25.4 bits (49), Expect(3) = 1e-023
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3 / -2
Query: 201 FSHEGPVHEHEGKAVRGVVVAQD 269
+S++GP+H+HE A+ ++ +D
Sbjct: 603 WSNKGPIHKHECYAMGIFLIIED 535
>gb|CX648317.1|CX648317 COLD1_27_H06.g1_A029 Root cold Pinus taeda cDNA clone
COLD1_27_H06_A029 5', mRNA sequence
Length = 809
Score = 365 bits (791), Expect = e-100
Identities = 144/208 (69%), Positives = 181/208 (87%)
Frame = -1 / -2
Query: 827 RSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSP 648
RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+ + + PG+P
Sbjct: 808 RSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTP 629
Query: 647 EAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQA 468
EA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTFANQA
Sbjct: 628 EALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQA 449
Query: 467 GLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYE 288
GLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY+
Sbjct: 448 GLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYD 269
Query: 287 QAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
+A+AWKVL+D+D+ HC+ FMF+NWSF+*
Sbjct: 268 RAIAWKVLNDEDSTHCIVFMFMNWSFM* 185
Score = 222 bits (479), Expect = 3e-057
Identities = 113/208 (54%), Positives = 132/208 (63%)
Frame = +1 / +3
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 186 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 365
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 366 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 545
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 546 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 725
Query: 745 TYCLAMAATLSRR*FSYENWKAMVSTDL 828
TY A+AAT SR+ S NW A+V+TDL
Sbjct: 726 TY*RAIAATFSRKWLS*VNWNAIVNTDL 809
Score = 58.3 bits (121), Expect(3) = 2e-024
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +3 / +2
Query: 351 LLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRVR 530
LL+NL ++ + I V++ ++ +L+ NQ R QHVQ L+ + ++ L TAHD +
Sbjct: 332 LLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRTAHDCI* 511
Query: 531 VLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
++P+ FQ + + +++ VE VA +P + C
Sbjct: 512 MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKC 625
Score = 57.0 bits (118), Expect(3) = 2e-024
Identities = 22/44 (50%), Positives = 27/44 (61%)
Frame = +3 / +2
Query: 690 ARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*ELESNGQH 821
+RRSYCHG PL RC++ +L H C S V I +LE N QH
Sbjct: 671 SRRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQH 802
Score = 35.0 bits (70), Expect(3) = 2e-024
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / +2
Query: 195 TGFSHEGPVHEHEGKAVRGVVVAQD 269
T +SH+GP+H+HE AV V V Q+
Sbjct: 176 TEWSHKGPIHKHENDAVGTVFVIQN 250
>gb|CF477415.1|CF477415 RTWW3_7_G07.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_7_G07_A022 5', mRNA sequence
Length = 752
Score = 364 bits (789), Expect = e-100
Identities = 144/216 (66%), Positives = 182/216 (84%)
Frame = -1 / +1
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 103 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 282
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCS 507
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS
Sbjct: 283 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCS 462
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGG 327
+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G
Sbjct: 463 VKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAG 642
Query: 326 VCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVN 219
+C+SSMGRP SY++ +AWKVL+D+D+ HC+ FMF+N
Sbjct: 643 ICLSSMGRPASYDRVIAWKVLNDEDSTHCIVFMFMN 750
Score = 213 bits (460), Expect = 1e-054
Identities = 111/217 (51%), Positives = 134/217 (61%)
Frame = +1 / -1
Query: 217 QFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSAFLP 396
QF NMK Q +SSS RTF A SY+ G P+L+ H P GR A PC II SV+ P
Sbjct: 752 QFINMKTMQWVLSSSFRTFQAITRSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLLRP 573
Query: 397 SSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWVS 576
SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+ S
Sbjct: 572 FSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQS 393
Query: 577 VRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCL 756
R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+ TY
Sbjct: 392 ARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY*R 213
Query: 757 AMAATLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
A+AAT SR+ S NW A+V+TDL +++ S + V
Sbjct: 212 AIAATFSRKWLS*VNWNAIVNTDLRFELVPESPDVLV 102
Score = 62.5 bits (130), Expect(2) = 7e-021
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +3 / -3
Query: 690 ARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*ELESNGQH*SCVAGAXXVTR 857
+RRSYCHG PL RC++ +L H C S V I +LE N QH S + VTR
Sbjct: 279 SRRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRSQIRAGARVTR 112
Score = 58.3 bits (121), Expect(2) = 7e-021
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +3 / -3
Query: 351 LLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRVR 530
LL+NL ++ + I V++ ++ +L+ NQ R QHVQ L+ + ++ L TAHD +
Sbjct: 618 LLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRTAHDCI* 439
Query: 531 VLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
++P+ FQ + + +++ VE VA +P + C
Sbjct: 438 MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKC 325
>gb|CO200550.1|CO200550 GEO2_8_C12.b1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_C12_A032 3', mRNA sequence
Length = 833
Score = 356 bits (771), Expect = 2e-097
Identities = 141/195 (72%), Positives = 171/195 (87%)
Frame = -1 / +2
Query: 788 NHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSY 609
NHLRE+VA+MARQYVR VVASVQRVAMA+APSR+G L + PG+PEA TLARW+ +SY
Sbjct: 2 NHLRENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSY 181
Query: 608 RFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQ 429
RFH G ELLR +++ ++ LK LW HSD+IMCCSLK+ PVFTFANQAGLDMLETTL+ALQ
Sbjct: 182 RFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQ 361
Query: 428 DISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDT 249
DISLEKILDD+GRK+ C++ +IMQQG+AYLP GVCVSSMGRP SY++A+AWKVL+D++
Sbjct: 362 DISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEEN 541
Query: 248 PHCLAFMFVNWSFV* 204
PHC+AFMF+NWSFV*
Sbjct: 542 PHCIAFMFMNWSFV* 586
Score = 224 bits (484), Expect = 6e-058
Identities = 112/194 (57%), Positives = 122/194 (62%)
Frame = +1 / -3
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 582 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 403
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVH 567
P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+ SE C S F S+
Sbjct: 402 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 223
Query: 568 WVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLT 747
RSS P WNL*L A V ASG PG C P REGA AMATLCTDATT T
Sbjct: 222 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRT 43
Query: 748 YCLAMAATLSRR*F 789
Y AM AT SR+ F
Sbjct: 42 Y*RAMDATFSRKWF 1
Score = 79.0 bits (166), Expect(3) = 3e-023
Identities = 40/99 (40%), Positives = 58/99 (58%)
Frame = +3 / -2
Query: 348 ALLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRV 527
+LLHNL + A+ AIVVK L +L+ NQ HV+A L+ KGE+ LQG HD +
Sbjct: 442 SLLHNLSNI*AKAFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGI 263
Query: 528 RVLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
RV+P+ FQ L +R+++ S +E V +P C+ C
Sbjct: 262 RVVPKCFQQRFIDLRIRSKKLYSQMESVTLTNPTCKGKC 146
Score = 42.3 bits (86), Expect(3) = 3e-023
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3 / -2
Query: 675 KLSTNARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VI 788
K+ T +RR HG PLH C++ +L HGC+ L *++
Sbjct: 115 KM*TQSRRG*GHGNPLHGCYNTTHILTSHGCNILP*MV 2
Score = 25.4 bits (49), Expect(3) = 3e-023
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3 / -2
Query: 201 FSHEGPVHEHEGKAVRGVVVAQD 269
+S++GP+H+HE A+ ++ +D
Sbjct: 589 WSNKGPIHKHECYAMGIFLIIED 521
>gb|CO369603.1|CO369603 RTK1_48_F07.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_48_F07_A029 3', mRNA sequence
Length = 707
Score = 347 bits (753), Expect = 5e-095
Identities = 138/192 (71%), Positives = 168/192 (87%)
Frame = -1 / +2
Query: 779 RESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFH 600
RE+VA+MARQYVR VVASVQRVAMA+APSR+G L + PG+PEA TLARW+ +SYRFH
Sbjct: 2 RENVASMARQYVRGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFH 181
Query: 599 TGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDIS 420
G ELLR +++ ++ LK LW HSD+IMCCSLK+ PVFTFANQAGLDMLETTL+ALQDIS
Sbjct: 182 LGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDIS 361
Query: 419 LEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHC 240
LEKILDD+GRK+ C++ +IMQQG+AYLP GVCVSSMGRP SY++A+AWKVL+D++ PHC
Sbjct: 362 LEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHC 541
Query: 239 LAFMFVNWSFV* 204
+AFMF+NWSFV*
Sbjct: 542 IAFMFMNWSFV* 577
Score = 222 bits (480), Expect = 2e-057
Identities = 111/191 (58%), Positives = 120/191 (62%)
Frame = +1 / -3
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 573 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 394
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVH 567
P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+ SE C S F S+
Sbjct: 393 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 214
Query: 568 WVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLT 747
RSS P WNL*L A V ASG PG C P REGA AMATLCTDATT T
Sbjct: 213 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRT 34
Query: 748 YCLAMAATLSR 780
Y AM AT SR
Sbjct: 33 Y*RAMDATFSR 1
Score = 79.0 bits (166), Expect(3) = 9e-023
Identities = 40/99 (40%), Positives = 58/99 (58%)
Frame = +3 / -2
Query: 348 ALLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRV 527
+LLHNL + A+ AIVVK L +L+ NQ HV+A L+ KGE+ LQG HD +
Sbjct: 433 SLLHNLSNI*AKAFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGI 254
Query: 528 RVLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
RV+P+ FQ L +R+++ S +E V +P C+ C
Sbjct: 253 RVVPKCFQQRFIDLRIRSKKLYSQMESVTLTNPTCKGKC 137
Score = 40.5 bits (82), Expect(3) = 9e-023
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +3 / -2
Query: 675 KLSTNARRSYCHGYPLHRCHHGPDVLPGHGCDAL 776
K+ T +RR HG PLH C++ +L HGC+ L
Sbjct: 106 KM*TQSRRG*GHGNPLHGCYNTTHILTSHGCNIL 5
Score = 25.4 bits (49), Expect(3) = 9e-023
Identities = 8/23 (34%), Positives = 17/23 (73%)
Frame = +3 / -2
Query: 201 FSHEGPVHEHEGKAVRGVVVAQD 269
+S++GP+H+HE A+ ++ +D
Sbjct: 580 WSNKGPIHKHECYAMGIFLIIED 512
>gb|CV034557.1|CV034557 RTNACL1_10_A06.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A06_A029 3', mRNA sequence
Length = 813
Score = 340 bits (737), Expect = 8e-093
Identities = 133/197 (67%), Positives = 169/197 (85%)
Frame = -1 / +3
Query: 794 YENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGR 615
+E HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +
Sbjct: 18 HEGHLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQ 197
Query: 614 SYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIA 435
SYR H G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+A
Sbjct: 198 SYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVA 377
Query: 434 LQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDD 255
LQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+
Sbjct: 378 LQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDE 557
Query: 254 DTPHCLAFMFVNWSFV* 204
D+ HC+ FMF+NWSF+*
Sbjct: 558 DSTHCIVFMFMNWSFM* 608
Score = 205 bits (443), Expect = 3e-052
Identities = 105/193 (54%), Positives = 122/193 (63%)
Frame = +1 / -3
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 607 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 428
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 427 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 248
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 247 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 68
Query: 745 TYCLAMAATLSRR 783
TY A+AAT SR+
Sbjct: 67 TY*RAIAATFSRK 29
Score = 58.3 bits (121), Expect(3) = 5e-021
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +3 / -2
Query: 351 LLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRVR 530
LL+NL ++ + I V++ ++ +L+ NQ R QHVQ L+ + ++ L TAHD +
Sbjct: 461 LLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRTAHDCI* 282
Query: 531 VLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
++P+ FQ + + +++ VE VA +P + C
Sbjct: 281 MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKC 168
Score = 45.5 bits (93), Expect(3) = 5e-021
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +3 / -2
Query: 690 ARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI 794
+RRSYCHG PL RC++ +L H C S V +
Sbjct: 122 SRRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALV 18
Score = 35.0 bits (70), Expect(3) = 5e-021
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / -2
Query: 195 TGFSHEGPVHEHEGKAVRGVVVAQD 269
T +SH+GP+H+HE AV V V Q+
Sbjct: 617 TEWSHKGPIHKHENDAVGTVFVIQN 543
>gb|CV034621.1|CV034621 RTNACL1_10_A06.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_10_A06_A029 5', mRNA sequence
Length = 731
Score = 337 bits (730), Expect = 7e-092
Identities = 132/194 (68%), Positives = 167/194 (86%)
Frame = -1 / +3
Query: 785 HLRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYR 606
HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +SYR
Sbjct: 3 HLRENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYR 182
Query: 605 FHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQD 426
H G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+ALQD
Sbjct: 183 LHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQD 362
Query: 425 ISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTP 246
ISL+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+
Sbjct: 363 ISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDST 542
Query: 245 HCLAFMFVNWSFV* 204
HC+ FMF+NWSF+*
Sbjct: 543 HCIVFMFMNWSFM* 584
Score = 205 bits (443), Expect = 3e-052
Identities = 105/193 (54%), Positives = 122/193 (63%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 583 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 404
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 403 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 224
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 223 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 44
Query: 745 TYCLAMAATLSRR 783
TY A+AAT SR+
Sbjct: 43 TY*RAIAATFSRK 5
Score = 58.3 bits (121), Expect(3) = 9e-021
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +3 / -1
Query: 351 LLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRVR 530
LL+NL ++ + I V++ ++ +L+ NQ R QHVQ L+ + ++ L TAHD +
Sbjct: 437 LLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRTAHDCI* 258
Query: 531 VLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
++P+ FQ + + +++ VE VA +P + C
Sbjct: 257 MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKC 144
Score = 44.6 bits (91), Expect(3) = 9e-021
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3 / -1
Query: 690 ARRSYCHGYPLHRCHHGPDVLPGHGCDALS 779
+RRSYCHG PL RC++ +L H C S
Sbjct: 98 SRRSYCHGNPLDRCYNTTHILTSHSCHIFS 9
Score = 35.0 bits (70), Expect(3) = 9e-021
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / -1
Query: 195 TGFSHEGPVHEHEGKAVRGVVVAQD 269
T +SH+GP+H+HE AV V V Q+
Sbjct: 593 TEWSHKGPIHKHENDAVGTVFVIQN 519
>gb|DR056287.1|DR056287 RTCA1_29_F12.b1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_F12_A029 3', mRNA sequence
Length = 782
Score = 331 bits (718), Expect = 3e-090
Identities = 130/192 (67%), Positives = 165/192 (85%)
Frame = -1 / +1
Query: 779 RESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFH 600
RE+VAAMARQYVR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +SYR H
Sbjct: 1 RENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLH 180
Query: 599 TGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDIS 420
G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+ALQDIS
Sbjct: 181 IGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDIS 360
Query: 419 LEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHC 240
L+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ HC
Sbjct: 361 LDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHC 540
Query: 239 LAFMFVNWSFV* 204
+ FMF+NWSF+*
Sbjct: 541 IVFMFMNWSFM* 576
Score = 202 bits (436), Expect = 3e-051
Identities = 104/191 (54%), Positives = 120/191 (62%)
Frame = +1 / -1
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 575 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 396
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 395 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 216
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 215 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 36
Query: 745 TYCLAMAATLS 777
TY A+AAT S
Sbjct: 35 TY*RAIAATFS 3
Score = 58.3 bits (121), Expect(3) = 9e-021
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +3 / -3
Query: 351 LLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRVR 530
LL+NL ++ + I V++ ++ +L+ NQ R QHVQ L+ + ++ L TAHD +
Sbjct: 429 LLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRTAHDCI* 250
Query: 531 VLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
++P+ FQ + + +++ VE VA +P + C
Sbjct: 249 MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKC 136
Score = 44.6 bits (91), Expect(3) = 9e-021
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +3 / -3
Query: 690 ARRSYCHGYPLHRCHHGPDVLPGHGCDALS 779
+RRSYCHG PL RC++ +L H C S
Sbjct: 90 SRRSYCHGNPLDRCYNTTHILTSHSCHIFS 1
Score = 35.0 bits (70), Expect(3) = 9e-021
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3 / -3
Query: 195 TGFSHEGPVHEHEGKAVRGVVVAQD 269
T +SH+GP+H+HE AV V V Q+
Sbjct: 585 TEWSHKGPIHKHENDAVGTVFVIQN 511
>gb|CO368668.1|CO368668 RTK1_42_C01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C01_A029 3', mRNA sequence
Length = 784
Score = 330 bits (714), Expect = 1e-089
Identities = 129/192 (67%), Positives = 164/192 (85%)
Frame = -1 / +2
Query: 779 RESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFH 600
RE+VAAMARQYVR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +SYR H
Sbjct: 2 RENVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLH 181
Query: 599 TGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDIS 420
G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETT +ALQDIS
Sbjct: 182 IGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTFVALQDIS 361
Query: 419 LEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHC 240
L+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ HC
Sbjct: 362 LDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHC 541
Query: 239 LAFMFVNWSFV* 204
+ FMF+NWSF+*
Sbjct: 542 IVFMFMNWSFM* 577
Score = 204 bits (441), Expect = 5e-052
Identities = 105/192 (54%), Positives = 121/192 (63%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 576 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 397
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 396 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 217
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 216 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 37
Query: 745 TYCLAMAATLSR 780
TY A+AAT SR
Sbjct: 36 TY*RAIAATFSR 1
>gb|CF672241.1|CF672241 RTCNT1_62_G02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_G02_A029 3', mRNA sequence
Length = 784
Score = 329 bits (712), Expect = 2e-089
Identities = 129/192 (67%), Positives = 164/192 (85%)
Frame = -1 / +2
Query: 779 RESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFH 600
RE+VAAMAR YVR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +SYR H
Sbjct: 2 RENVAAMARPYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLH 181
Query: 599 TGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDIS 420
G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+ALQDIS
Sbjct: 182 IGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDIS 361
Query: 419 LEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHC 240
L+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ HC
Sbjct: 362 LDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHC 541
Query: 239 LAFMFVNWSFV* 204
+ FMF+NWSF+*
Sbjct: 542 IVFMFMNWSFM* 577
Score = 205 bits (442), Expect = 4e-052
Identities = 105/192 (54%), Positives = 121/192 (63%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 576 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 397
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 396 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 217
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 216 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 37
Query: 745 TYCLAMAATLSR 780
TY A+AAT SR
Sbjct: 36 TYGRAIAATFSR 1
>gb|DR056364.1|DR056364 RTCA1_29_F12.g1_A029 Roots minus calcium Pinus taeda cDNA clone
RTCA1_29_F12_A029 5', mRNA sequence
Length = 638
Score = 328 bits (711), Expect = 3e-089
Identities = 133/197 (67%), Positives = 166/197 (84%)
Frame = -1 / +2
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 47 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 226
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCS 507
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS
Sbjct: 227 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCS 406
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGG 327
+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G
Sbjct: 407 VKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAG 586
Query: 326 VCVSSMGRPVSYEQAVA 276
+C+SSMGRP SY++A+A
Sbjct: 587 ICLSSMGRPASYDRAIA 637
Score = 190 bits (410), Expect = 1e-047
Identities = 100/197 (50%), Positives = 122/197 (61%)
Frame = +1 / -3
Query: 277 ATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSS 456
A A SY+ G P+L+ H P GR A PC II SV+ P SSRI S+++S A +VVSS
Sbjct: 636 AIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKKLLRPFSSRILSKDISCNATNVVSS 457
Query: 457 MSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLAS 636
MS PA A V TG F EQHMI SE C S+F S+ S R S P+W+L*L I A
Sbjct: 456 MSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQSARNRSTPMWSL*L*QIQRAR 277
Query: 637 VCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCLAMAATLSRR*FSYENWKAMV 816
V ASG PG +C REGAIAMATL TDATT+ TY A+AAT SR+ S NW A+V
Sbjct: 276 VSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY*RAIAATFSRKWLS*VNWNAIV 97
Query: 817 STDLVLQVLXXSLEARV 867
+TDL +++ S + V
Sbjct: 96 NTDLRFELVPESPDVLV 46
Score = 62.5 bits (130), Expect(2) = 7e-021
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +3 / -2
Query: 690 ARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*ELESNGQH*SCVAGAXXVTR 857
+RRSYCHG PL RC++ +L H C S V I +LE N QH S + VTR
Sbjct: 223 SRRSYCHGNPLDRCYNTTHILTSHSCHIFSQVALISKLECNSQHRSQIRAGARVTR 56
Score = 58.3 bits (121), Expect(2) = 7e-021
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +3 / -2
Query: 351 LLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRVR 530
LL+NL ++ + I V++ ++ +L+ NQ R QHVQ L+ + ++ L TAHD +
Sbjct: 562 LLNNLTIICEKTFATIFVQNFVQRYILQCNQCRFQHVQPCLICECKNRQRLHRTAHDCI* 383
Query: 531 VLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
++P+ FQ + + +++ VE VA +P + C
Sbjct: 382 MVPK*FQYRLTGFTISSKQVHPYVESVALTNPTGKSKC 269
>gb|DR742450.1|DR742450 RTCU1_4_D01.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_4_D01_A029 3', mRNA sequence
Length = 702
Score = 328 bits (711), Expect = 3e-089
Identities = 129/193 (66%), Positives = 164/193 (84%)
Frame = -1 / -1
Query: 782 LRESVAAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRF 603
L +VAAMARQYVR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +SYR
Sbjct: 702 LARNVAAMARQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRL 523
Query: 602 HTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDI 423
H G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+ALQDI
Sbjct: 522 HIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDI 343
Query: 422 SLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPH 243
SL+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ H
Sbjct: 342 SLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTH 163
Query: 242 CLAFMFVNWSFV* 204
C+ FMF+NWSF+*
Sbjct: 162 CIVFMFMNWSFM* 124
Score = 200 bits (432), Expect = 9e-051
Identities = 103/189 (54%), Positives = 119/189 (62%)
Frame = +1 / +2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 125 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 304
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 305 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 484
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 485 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 664
Query: 745 TYCLAMAAT 771
TY A+AAT
Sbjct: 665 TY*RAIAAT 691
>gb|DR120678.1|DR120678 RTMG1_31_F04.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_31_F04_A029 3', mRNA sequence
Length = 782
Score = 325 bits (703), Expect = 4e-088
Identities = 128/180 (71%), Positives = 156/180 (86%)
Frame = -1 / -3
Query: 743 RTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQC 564
R VVASVQRVAMA+APSR+G L + PG+PEA TLARW+ +SYRFH G ELLR +++
Sbjct: 780 RGVVASVQRVAMALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEV 601
Query: 563 TDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKA 384
++ LK LW HSD+IMCCSLK+ PVFTFANQAGLDMLETTL+ALQDISLEKILDD+GRK+
Sbjct: 600 NESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKS 421
Query: 383 LCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
C++ +IMQQG+AYLP GVCVSSMGRP SY++A+AWKVL+D++ PHC+AFMF+NWSFV*
Sbjct: 420 FCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 241
Score = 210 bits (453), Expect = 1e-053
Identities = 103/177 (58%), Positives = 112/177 (63%)
Frame = +1 / +2
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 245 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 424
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVH 567
P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+ SE C S F S+
Sbjct: 425 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 604
Query: 568 WVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATT 738
RSS P WNL*L A V ASG PG C P REGA AMATLCTDATT
Sbjct: 605 SELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATT 775
>gb|CX713945.1|CX713945 RTPQ1_15_G12.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_15_G12_A032 3', mRNA sequence
Length = 774
Score = 315 bits (682), Expect = 3e-085
Identities = 125/188 (66%), Positives = 156/188 (82%)
Frame = -1 / +1
Query: 767 AAMARQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAE 588
AAM RQYVR V+ASVQRVA+A+APS+ + + PG+PEA TL RWI +SYR H G E
Sbjct: 1 AAMTRQYVRNVIASVQRVAIALAPSQQSPHIGPRLPPGTPEALTLTRWIFQSYRMHLGLE 180
Query: 587 LLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKI 408
L+ +++ ++ LK LW HSD IMCCS K PVFTFANQAGLDMLETTL+ALQDISLEKI
Sbjct: 181 LIGDNSEPNESVLKLLWHHSDGIMCCSWKPLPVFTFANQAGLDMLETTLVALQDISLEKI 360
Query: 407 LDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFM 228
LD++GRK LC+++ +IMQQG+AYLP G+C+SSMGRPVSY++A+AWKVL+D+D HC+AFM
Sbjct: 361 LDENGRKRLCSDFTQIMQQGYAYLPSGICISSMGRPVSYDRAIAWKVLNDEDVIHCIAFM 540
Query: 227 FVNWSFV* 204
F+NWSFV*
Sbjct: 541 FLNWSFV* 564
Score = 149 bits (321), Expect(3) = 1e-043
Identities = 70/120 (58%), Positives = 79/120 (65%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
HTKDQF NMKA Q SSSL TFHA A SY+TG P+L+ H P GR A PCCII S S
Sbjct: 563 HTKDQFKNMKAMQ*ITSSSLSTFHAIARSYETGLPILEMHIPEGR*A*PCCIICVKSEHS 384
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SS IFS ++S RA VVSS+S PA A V TG F+EQHMI SE CH +F S+
Sbjct: 383 LLRPFSSSIFSNDISCRATKVVSSISSPA*FANVKTGNGFQEQHMIPSEWCHRSFNTDSL 204
Score = 41.8 bits (85), Expect(3) = 1e-043
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3 / -1
Query: 678 LSTNARRSYCHGYPLHRCHHGPDVLPGHGC 767
+ T RRS C+G PL+RC++ D+L HGC
Sbjct: 90 MRTLLRRS*CNGNPLNRCYNITDILASHGC 1
Score = 23.5 bits (45), Expect(3) = 1e-043
Identities = 14/25 (56%), Positives = 15/25 (60%)
Frame = +1 / -2
Query: 586 SSAPVWNL*LLPIHLASVCASGDPG 660
SS+P L*L I SV ASG PG
Sbjct: 182 SSSPRCIL*L*KIQRVSVSASGVPG 108
>gb|CO368744.1|CO368744 RTK1_42_C01.g1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_C01_A029 5', mRNA sequence
Length = 758
Score = 310 bits (672), Expect = 7e-084
Identities = 120/182 (65%), Positives = 154/182 (84%)
Frame = -1 / +1
Query: 749 YVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDT 570
YVR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +SYR H G +L R D
Sbjct: 25 YVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADC 204
Query: 569 QCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGR 390
+ +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETT +ALQDISL+KILD++GR
Sbjct: 205 EASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTFVALQDISLDKILDENGR 384
Query: 389 KALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSF 210
K+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ HC+ FMF+NWSF
Sbjct: 385 KSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSF 564
Query: 209 V* 204
+*
Sbjct: 565 M* 570
Score = 194 bits (418), Expect = 8e-049
Identities = 99/182 (54%), Positives = 114/182 (62%)
Frame = +1 / -1
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 569 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 390
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 389 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 210
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 209 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATL*TDATTLR 30
Query: 745 TY 750
TY
Sbjct: 29 TY 24
>gb|CO166187.1|CO166187 FLD1_60_A12.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_60_A12_A029 3', mRNA sequence
Length = 751
Score = 309 bits (669), Expect = 2e-083
Identities = 120/181 (66%), Positives = 154/181 (85%)
Frame = -1 / +2
Query: 746 VRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQ 567
VR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +SYR H G +L R D +
Sbjct: 2 VRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCE 181
Query: 566 CTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRK 387
+++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK
Sbjct: 182 ASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRK 361
Query: 386 ALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 207
+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ HC+ FMF+NWSF+
Sbjct: 362 SFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM 541
Query: 206 * 204
*
Sbjct: 542 * 544
Score = 192 bits (413), Expect = 4e-048
Identities = 98/181 (54%), Positives = 113/181 (62%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 543 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 364
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 363 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 184
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVL 744
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+
Sbjct: 183 ASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLR 4
Query: 745 T 747
T
Sbjct: 3 T 1
>gb|CF672326.1|CF672326 RTCNT1_62_G02.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_62_G02_A029 5', mRNA sequence
Length = 787
Score = 268 bits (579), Expect(2) = 3e-081
Identities = 111/161 (68%), Positives = 135/161 (83%)
Frame = -1 / +1
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 214 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 393
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCS 507
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS
Sbjct: 394 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCS 573
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKA 384
+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK+
Sbjct: 574 VKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKS 696
Score = 158 bits (340), Expect = 4e-038
Identities = 82/158 (51%), Positives = 100/158 (63%)
Frame = +1 / -3
Query: 394 PSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWV 573
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 686 PFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSLASQ 507
Query: 574 SVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYC 753
S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+ TY
Sbjct: 506 SARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY* 327
Query: 754 LAMAATLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
A+AAT SR+ S NW A+V+TDL +++ S + V
Sbjct: 326 RAIAATFSRKWLS*VNWNAIVNTDLRFELVPESPDVLV 213
Score = 54.7 bits (113), Expect(2) = 3e-081
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -1 / +3
Query: 377 TEYPKIMQQGFAYLPGGVCVSSMGRPVS 294
T+Y +I+QQG+AYLP G+C+SSMGRP S
Sbjct: 702 TDYGQIIQQGYAYLPAGICLSSMGRPAS 785
>gb|DR387675.1|DR387675 RTHG1_23_H11.b1_A029 Roots plus added mercury Pinus taeda cDNA
clone RTHG1_23_H11_A029 3', mRNA sequence
Length = 760
Score = 215 bits (463), Expect(2) = 9e-081
Identities = 87/135 (64%), Positives = 110/135 (81%)
Frame = -1 / +3
Query: 755 RQYVRTVVASVQRVAMAIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRT 576
RQYVR+VVASVQRVAMAIAPSR+ + + PG+PEA TLARWI +SYR H G +L R
Sbjct: 3 RQYVRSVVASVQRVAMAIAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRA 182
Query: 575 DTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDD 396
D + +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++
Sbjct: 183 DCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDEN 362
Query: 395 GRKALCTEYPKIMQQ 351
GRK+ T+Y ++ +
Sbjct: 363 GRKSFFTDYGQLFNR 407
Score = 133 bits (284), Expect(2) = 3e-045
Identities = 68/126 (53%), Positives = 79/126 (62%)
Frame = +1 / -1
Query: 373 SVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFK 552
SV+ P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F
Sbjct: 385 SVKKLLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFS 206
Query: 553 EASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDA 732
S+ S R S P+W+L*L I A V ASG PG +C REGAIAMATL TDA
Sbjct: 205 TDSLASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDA 26
Query: 733 TTVLTY 750
TT+ TY
Sbjct: 25 TTLRTY 8
Score = 106 bits (226), Expect(2) = 9e-081
Identities = 36/53 (67%), Positives = 49/53 (92%)
Frame = -1 / +2
Query: 362 IMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ HC+ FMF+NWSF+*
Sbjct: 395 IIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 553
Score = 69.8 bits (146), Expect(2) = 3e-045
Identities = 31/53 (58%), Positives = 35/53 (66%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCII 363
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II
Sbjct: 552 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II 394
>gb|CF478695.1|CF478695 RTWW3_16_A03.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_A03_A022 5', mRNA sequence
Length = 733
Score = 298 bits (646), Expect = 3e-080
Identities = 124/185 (67%), Positives = 152/185 (82%)
Frame = -1 / +3
Query: 887 EVGSGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 708
E+GS + ++ N RSVLTIAFQF++ENHLRE+VA+MARQYVR VVASVQRVAM
Sbjct: 174 EIGSAGARTSVDYGGNSGNLRSVLTIAFQFTFENHLRENVASMARQYVRGVVASVQRVAM 353
Query: 707 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHS 528
A+APSR+G L + PG+PEA TLARW+ +SYRFH G ELLR +++ ++ LK LW HS
Sbjct: 354 ALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHS 533
Query: 527 DSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQG 348
D+IMCCSLK+ PVFTFANQAGLDMLETTL+ALQDISLEKILDD+GRK+ C++ +IMQQG
Sbjct: 534 DAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQG 713
Query: 347 FAYLP 333
+AYLP
Sbjct: 714 YAYLP 728
Score = 188 bits (404), Expect = 7e-047
Identities = 95/169 (56%), Positives = 105/169 (62%)
Frame = +1 / -1
Query: 328 PPGRYAKPCCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFR 507
P GR A PCCII S Q P SS IFS ++S +A VVS+MSRPA AKV TG F+
Sbjct: 733 PAGR*AYPCCII*AISEQKLLRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFK 554
Query: 508 EQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPP 687
EQHM+ SE C S F S+ RSS P WNL*L A V ASG PG C P
Sbjct: 553 EQHMMASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEP 374
Query: 688 MREGAIAMATLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDLVL 834
REGA AMATLCTDATT TY AM AT SR+ FS NWKA+V+TDL L
Sbjct: 373 SREGARAMATLCTDATTPRTY*RAMDATFSRKWFSKVNWKAIVNTDLRL 227
Score = 79.0 bits (166), Expect(2) = 3e-025
Identities = 40/99 (40%), Positives = 58/99 (58%)
Frame = +3 / -3
Query: 348 ALLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRV 527
+LLHNL + A+ AIVVK L +L+ NQ HV+A L+ KGE+ LQG HD +
Sbjct: 713 SLLHNLSNI*AKAFAAIVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGI 534
Query: 528 RVLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
RV+P+ FQ L +R+++ S +E V +P C+ C
Sbjct: 533 RVVPKCFQQRFIDLRIRSKKLYSQMESVTLTNPTCKGKC 417
Score = 56.5 bits (117), Expect(2) = 3e-025
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +3 / -3
Query: 675 KLSTNARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*ELESNGQH*SCVAGAXXV 851
K+ T +RR HG PLH C++ +L HGC+ L *++ ELESN Q+*S VA +
Sbjct: 386 KM*TQSRRG*GHGNPLHGCYNTTHILTSHGCNILP*MVLKSELESNCQY*SEVARVSTI 210
>gb|CF393159.1|CF393159 RTDR3_17_B10.g1_A022 Loblolly pine roots recovering from drought
DR3 Pinus taeda cDNA clone RTDR3_17_B10_A022 5', mRNA
sequence
Length = 710
Score = 289 bits (626), Expect = 2e-077
Identities = 121/182 (66%), Positives = 148/182 (81%)
Frame = -1 / +1
Query: 887 EVGSGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 708
E+GS + ++ N RSVLTIAFQF++ENHLRE+VA+MARQYVR VVASVQRVAM
Sbjct: 163 EIGSAGARTSVDYGGNSGNLRSVLTIAFQFTFENHLRENVASMARQYVRGVVASVQRVAM 342
Query: 707 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHS 528
A+APSR+G L + PG+PEA TLARW+ +SYRFH G ELLR +++ ++ LK LW HS
Sbjct: 343 ALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHS 522
Query: 527 DSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQG 348
D+IMCCSLK+ PVFTFANQAGLDMLETTL+ALQDISLEKILDD GRK+ C++ +IMQQG
Sbjct: 523 DAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDXGRKSFCSDIAQIMQQG 702
Query: 347 FA 342
+A
Sbjct: 703 YA 708
Score = 182 bits (393), Expect = 2e-045
Identities = 92/164 (56%), Positives = 102/164 (62%)
Frame = +1 / -1
Query: 343 AKPCCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMI 522
A PCCII S Q P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+
Sbjct: 707 AYPCCII*AISEQKLLRPXSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMM 528
Query: 523 ESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGA 702
SE C S F S+ RSS P WNL*L A V ASG PG C P REGA
Sbjct: 527 ASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSLGPRCEPSREGA 348
Query: 703 IAMATLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDLVL 834
AMATLCTDATT TY AM AT SR+ FS NWKA+V+TDL L
Sbjct: 347 RAMATLCTDATTPRTY*RAMDATFSRKWFSKVNWKAIVNTDLRL 216
Score = 76.7 bits (161), Expect(2) = 2e-024
Identities = 39/99 (39%), Positives = 57/99 (57%)
Frame = +3 / -3
Query: 348 ALLHNLRVLGAERLPAIVVKDLLKGDVLESNQRRLQHVQAGLVGKGEHGSSLQGTAHDRV 527
+LLHNL + A+ A VVK L +L+ NQ HV+A L+ KGE+ LQG HD +
Sbjct: 702 SLLHNLSNI*AKAFAAXVVKYLF**YILQGNQGCF*HVKACLIRKGENRQ*LQGATHDGI 523
Query: 528 RVLPQRFQGSIRALGVRAEEFGSSVEPVAPADPPCQRVC 644
RV+P+ FQ L +R+++ S +E V +P C+ C
Sbjct: 522 RVVPKCFQQRFIDLRIRSKKLYSQMESVTLTNPTCKGKC 406
Score = 56.5 bits (117), Expect(2) = 2e-024
Identities = 26/59 (44%), Positives = 36/59 (61%)
Frame = +3 / -3
Query: 675 KLSTNARRSYCHGYPLHRCHHGPDVLPGHGCDALS*VIFI*ELESNGQH*SCVAGAXXV 851
K+ T +RR HG PLH C++ +L HGC+ L *++ ELESN Q+*S VA +
Sbjct: 375 KM*TQSRRG*GHGNPLHGCYNTTHILTSHGCNILP*MVLKSELESNCQY*SEVARVSTI 199
>gb|CF470504.1|CF470504 RTDS1_13_D09.b1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_D09_A015 3', mRNA sequence
Length = 649
Score = 288 bits (624), Expect = 3e-077
Identities = 110/152 (72%), Positives = 135/152 (88%)
Frame = -1 / +2
Query: 659 PGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTF 480
PG+PEA TLARW+ +SYRFH G ELLR +++ ++ LK LW HSD+IMCCSLK+ PVFTF
Sbjct: 17 PGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTF 196
Query: 479 ANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRP 300
ANQAGLDMLETTL+ALQDISLEKILDD+GRK+ C++ +IMQQG+AYLP GVCVSSMGRP
Sbjct: 197 ANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRP 376
Query: 299 VSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
SY++A+AWKVL+D++ PHC+AFMF+NWSFV*
Sbjct: 377 ASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 472
Score = 175 bits (376), Expect = 5e-043
Identities = 86/151 (56%), Positives = 95/151 (62%)
Frame = +1 / -2
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 468 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 289
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVH 567
P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+ SE C S F S+
Sbjct: 288 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 109
Query: 568 WVSVRRSSAPVWNL*LLPIHLASVCASGDPG 660
RSS P WNL*L A V ASG PG
Sbjct: 108 SELGLRSSTPKWNL*L*QTQRARVSASGVPG 16
>gb|BQ634357.1|BQ634357 NXRV067_H08_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV067_H08 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 651
Score = 286 bits (618), Expect = 2e-076
Identities = 109/152 (71%), Positives = 134/152 (88%)
Frame = -1 / +2
Query: 659 PGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTF 480
PG+P A TLARW+ +SYRFH G ELLR +++ ++ LK LW HSD+IMCCSLK+ PVFTF
Sbjct: 8 PGTPXALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHSDAIMCCSLKSLPVFTF 187
Query: 479 ANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRP 300
ANQAGLDMLETTL+ALQDISLEKILDD+GRK+ C++ +IMQQG+AYLP GVCVSSMGRP
Sbjct: 188 ANQAGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRP 367
Query: 299 VSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
SY++A+AWKVL+D++ PHC+AFMF+NWSFV*
Sbjct: 368 ASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 463
Score = 173 bits (372), Expect = 2e-042
Identities = 85/151 (56%), Positives = 94/151 (62%)
Frame = +1 / -1
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 459 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 280
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVH 567
P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+ SE C S F S+
Sbjct: 279 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSLT 100
Query: 568 WVSVRRSSAPVWNL*LLPIHLASVCASGDPG 660
RSS P WNL*L A V A G PG
Sbjct: 99 SELGLRSSTPKWNL*L*QTQRARVSAXGVPG 7
>gb|BX249925.1|BX249925 BX249925 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP030D04, mRNA sequence
Length = 681
Score = 280 bits (605), Expect = 1e-074
Identities = 116/173 (67%), Positives = 142/173 (82%)
Frame = -1 / +3
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D + N RSVLTIAFQF+YE+H RE+VAAMARQYVR+VVASVQRVAMA+APSR+
Sbjct: 162 TRTSGDSGTNSNLRSVLTIAFQFTYESHSRENVAAMARQYVRSVVASVQRVAMALAPSRL 341
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCS 507
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS
Sbjct: 342 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCS 521
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQG 348
+KA PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG
Sbjct: 522 VKALPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQG 680
Score = 160 bits (344), Expect = 1e-038
Identities = 88/173 (50%), Positives = 105/173 (60%)
Frame = +1 / -3
Query: 349 PCCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIES 528
PC II SV+ P SSRI S+++S A +VVSSMS PA A V TG AF EQHMI S
Sbjct: 679 PC*II*P*SVKKLLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNAFTEQHMIAS 500
Query: 529 ECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIA 708
E C S+F S+ S R S P+ +L*L I A V ASG PG +C REGA A
Sbjct: 499 EWCQSSFSTDSLASQSARNRSTPMCSL*L*QIQRARVSASGVPGGGLGPTCEFSREGANA 320
Query: 709 MATLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
MATL TDATT+ TY A+AAT SR S NW AMV+TDL +++ S + V
Sbjct: 319 MATLWTDATTLRTY*RAIAATFSREWLS*VNWNAMVNTDLRFELVPESPDVLV 161
>gb|DR013276.1|DR013276 HEAT1_18_G05.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone
HEAT1_18_G05_A029 3', mRNA sequence
Length = 678
Score = 272 bits (589), Expect = 2e-072
Identities = 102/152 (67%), Positives = 132/152 (86%)
Frame = -1 / +1
Query: 659 PGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTF 480
PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTF
Sbjct: 28 PGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTF 207
Query: 479 ANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRP 300
ANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP
Sbjct: 208 ANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRP 387
Query: 299 VSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
SY++A+AWKVL+D+D+ HC+ FMF+NWSF+*
Sbjct: 388 ASYDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 483
Score = 161 bits (347), Expect = 5e-039
Identities = 81/152 (53%), Positives = 94/152 (61%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 482 HIKDQFINMKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 303
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 302 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 123
Query: 565 HWVSVRRSSAPVWNL*LLPIHLASVCASGDPG 660
S R S P+W+L*L I A V ASG PG
Sbjct: 122 ASQSARNRSTPMWSL*L*QIQRARVSASGVPG 27
>gb|BF221274.1|BF221274 NXCI_156_G07_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_156_G07 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 528
Score = 271 bits (586), Expect = 5e-072
Identities = 113/174 (64%), Positives = 140/174 (80%)
Frame = -1 / +2
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 5 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 184
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCS 507
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS
Sbjct: 185 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCS 364
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGF 345
+K+ PVFTFANQA MLETT ALQDISL+KILD++GRK+ T+Y +I+QQG+
Sbjct: 365 VKSLPVFTFANQAXXXMLETTXXALQDISLDKILDENGRKSFFTDYGQIIQQGY 526
Score = 159 bits (341), Expect = 3e-038
Identities = 86/173 (49%), Positives = 104/173 (60%)
Frame = +1 / -1
Query: 349 PCCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIES 528
PC II SV+ P SSRI S+++S A VVSSM A A V TG F EQHMI S
Sbjct: 522 PC*II*P*SVKKLLRPFSSRILSKDISCNAXXVVSSMXXXA*FANVKTGNDFTEQHMIAS 343
Query: 529 ECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIA 708
E C S+F S+ S R S P+W+L*L I A V ASG PG +C REGAIA
Sbjct: 342 EWCQSSFSTDSLASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIA 163
Query: 709 MATLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
MATL TDATT+ TY A+AAT SR+ S NW A+V+TDL +++ S + V
Sbjct: 162 MATLWTDATTLRTY*RAIAATFSRKWLS*VNWNAIVNTDLRFELVPESPDVLV 4
>gb|CO169862.1|CO169862 NDL1_10_D06.b1_A029 Needles control Pinus taeda cDNA clone
NDL1_10_D06_A029 3', mRNA sequence
Length = 544
Score = 237 bits (512), Expect = 8e-062
Identities = 90/119 (75%), Positives = 109/119 (91%)
Frame = -1 / +3
Query: 560 DASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKAL 381
++ LK LW HSD+IMCCSLK+ PVFTFANQAGLDMLETTL+ALQDISLEKILDD+GRK+
Sbjct: 9 ESLLKTLWHHSDAIMCCSLKSLPVFTFANQAGLDMLETTLVALQDISLEKILDDNGRKSF 188
Query: 380 CTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
C++ +IMQQG+AYLP GVCVSSMGRP SY++A+AWKVL+D++ PHC+AFMF+NWSFV*
Sbjct: 189 CSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 365
Score = 151 bits (324), Expect = 7e-036
Identities = 70/119 (58%), Positives = 79/119 (66%)
Frame = +1 / -1
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 361 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 182
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SS IFS ++S +A VVS+MSRPA AKV TG F+EQHM+ SE C S F S+
Sbjct: 181 LRPLSSSIFSNDISCKATRVVSNMSRPA*FAKVKTGNDFKEQHMMASEWCQSVFSRDSL 5
>gb|AI920150.1|AI920150 1680 Pine Lambda Zap Xylem library Pinus taeda cDNA clone
g3_PL2CSUH, mRNA sequence
Length = 680
Score = 221 bits (476), Expect(2) = 1e-061
Identities = 84/110 (76%), Positives = 101/110 (91%)
Frame = -1 / +3
Query: 533 HSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQ 354
HSD IMCCS K PVFTFANQAGLDMLETTL+ALQDISLEKILD++GRK LC+++ +IMQ
Sbjct: 162 HSDGIMCCSWKPLPVFTFANQAGLDMLETTLVALQDISLEKILDENGRKRLCSDFTQIMQ 341
Query: 353 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
QG+AYLP G+C+SSMGRPVSY++A+AWKVL+D+D HC+AFMF+NWSFV*
Sbjct: 342 QGYAYLPSGICISSMGRPVSYDRAIAWKVLNDEDVIHCIAFMFLNWSFV* 491
Score = 139 bits (298), Expect = 3e-032
Identities = 66/109 (60%), Positives = 73/109 (66%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
HTKDQF NMKA Q SSSL TFHA A SY+TG P+L+ H P GR A PCCII S S
Sbjct: 490 HTKDQFKNMKAMQ*ITSSSLSTFHAIARSYETGLPILEMHIPEGR*A*PCCIICVKSEHS 311
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESE 531
P SS IFS ++S RA VVSS+S PA A V TG F+EQHMI SE
Sbjct: 310 LLRPFSSSIFSNDISCRATKVVSSISSPA*FANVKTGNGFQEQHMIPSE 164
Score = 36.8 bits (74), Expect(2) = 1e-061
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1 / +3
Query: 653 SPEAHTLARWIGRSYRFHTGAEL 585
+P+A TL RWI +SYR H G EL
Sbjct: 42 TPKALTLTRWIFQSYRMHLGLEL 110
>gb|BF220484.1|BF220484 NXCI_147_B05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_147_B05 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 462
Score = 230 bits (497), Expect = 1e-059
Identities = 98/152 (64%), Positives = 117/152 (76%)
Frame = -1 / +2
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 5 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 184
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCS 507
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW H D+IMCCS
Sbjct: 185 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHXDAIMCCS 364
Query: 506 LKAAPVFTFANQAGLDMLETTLIALQDISLEK 411
+K FT ANQA L MLETTL+ALQDIS K
Sbjct: 365 VKXLXXFTXANQAXLXMLETTLVALQDISXXK 460
Score = 135 bits (289), Expect = 5e-031
Identities = 72/153 (47%), Positives = 90/153 (58%)
Frame = +1 / -1
Query: 409 IFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWVSVRRS 588
I +++S A +VVSSM A A V F EQHMI S C S+F S+ S R
Sbjct: 462 ILXKDISCNATNVVSSMXXXA*FAXVKXXXXFTEQHMIASXWCQSSFSTDSLASQSARNR 283
Query: 589 SAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCLAMAA 768
S P+W+L*L I A V ASG PG +C REGAIAMATL TDATT+ TY A+AA
Sbjct: 282 STPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMATLWTDATTLRTY*RAIAA 103
Query: 769 TLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
T SR+ S NW A+V+TDL +++ S + V
Sbjct: 102 TFSRKWLS*VNWNAIVNTDLRFELVPESPDVLV 4
>gb|AA739773.1|AA739773 538 PtIFG2 Pinus taeda cDNA clone 8871M 3', mRNA sequence
Length = 663
Score = 230 bits (496), Expect = 1e-059
Identities = 88/116 (75%), Positives = 105/116 (90%)
Frame = -1 / +2
Query: 551 LKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTE 372
LK LW HSD+IMC SLK+ PVFTF NQAGLDMLETTL+ALQDISLEKILDD+GRK+ C++
Sbjct: 131 LKTLWHHSDAIMCXSLKSLPVFTFXNQAGLDMLETTLVALQDISLEKILDDNGRKSFCSD 310
Query: 371 YPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
+IMQQG+AYLP GVCVSSMGRP SY++A+AWKVL+D++ PHC+AFMF+NWSFV*
Sbjct: 311 IAQIMQQGYAYLPAGVCVSSMGRPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 478
Score = 146 bits (313), Expect = 2e-034
Identities = 68/119 (57%), Positives = 77/119 (64%)
Frame = +1 / -1
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 474 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 295
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SS IFS ++S +A VVS+MSRPA KV TG F+ QHM+ SE C S F S+
Sbjct: 294 LRPLSSSIFSNDISCKATRVVSNMSRPA*FXKVKTGNDFKXQHMMASEWCQSVFSXNSL 118
>gb|DR090523.1|DR090523 RTAL1_15_D10.g1_A029 Roots plus added aluminum Pinus taeda cDNA
clone RTAL1_15_D10_A029 5', mRNA sequence
Length = 762
Score = 188 bits (405), Expect(2) = 3e-058
Identities = 75/161 (46%), Positives = 108/161 (67%)
Frame = -1 / +2
Query: 692 RIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMC 513
R+G L ++ G+ E L + I SYR + G +LLR + K +W HSD+++C
Sbjct: 113 RVGSTLGLRNLSGTTEVLALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALIC 292
Query: 512 CSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLP 333
C+ K+ P F FAN+A LDMLETT L D+ ++ LD+ +K +++ K+MQQGFAYLP
Sbjct: 293 CTCKSLPEFIFANEAALDMLETTSGGLHDLRWDQTLDETEKKNAYSDFTKVMQQGFAYLP 472
Query: 332 GGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSF 210
G+ +SSMGRPV+YE+A+AW V +D++ C+AFMFVNWSF
Sbjct: 473 AGIRLSSMGRPVAYERAMAWSVANDNERMPCVAFMFVNWSF 595
Score = 107 bits (228), Expect(2) = 3e-026
Identities = 62/148 (41%), Positives = 77/148 (52%)
Frame = +1 / -1
Query: 214 DQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSAFL 393
DQ TNMKA +S SL T HA A S TGRP+L+ P GRYA PCCI L S + F
Sbjct: 591 DQLTNMKATHGILSLSLATLHAIALS*ATGRPILERRIPAGRYANPCCITLVKSE*AFFF 412
Query: 394 PSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWV 573
SSR+ S S + VVSS+S+ A A +N+G QH+ SE C + K +S
Sbjct: 411 SVSSRV*SHLRSCKPPDVVSSISKAASFANMNSGNDLHVQHIRASEWCQTILKSSSSFEG 232
Query: 574 SVRRSSAPVWNL*LLPIHLASVCASGDP 657
+ S P + L*L I S S P
Sbjct: 231 CFLKRSIPKFIL*LPTIRWTSARTSVVP 148
Score = 57.9 bits (120), Expect(2) = 3e-058
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = -1 / +2
Query: 800 FSYENHLRESVAAMARQYVRTVVASVQRVAMAIAP 696
F YE H +SV+ AR+Y+RTVVASVQRVAMAIAP
Sbjct: 8 FGYETHNCDSVSVAARKYMRTVVASVQRVAMAIAP 112
Score = 31.8 bits (63), Expect(2) = 3e-026
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1 / -1
Query: 697 GAIAMATLCTDATTVLTYCLAMAATLSR 780
GAIA+AT T+ATTV Y A TLS+
Sbjct: 111 GAIAIATR*TEATTVRMYLRAATDTLSQ 28
>gb|AW698003.1|AW698003 NXNV_079_D09_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_079_D09 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 394
Score = 224 bits (483), Expect = 8e-058
Identities = 83/128 (64%), Positives = 110/128 (85%)
Frame = -1 / +3
Query: 587 LLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKI 408
L D + +++ LK LW HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+ALQDISL+KI
Sbjct: 3 LFXADCEASESVLKLLWHHSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKI 182
Query: 407 LDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFM 228
LD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AW L+D+D+ HC+ FM
Sbjct: 183 LDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWXXLNDEDSTHCIVFM 362
Query: 227 FVNWSFV* 204
F+NWSF+*
Sbjct: 363 FMNWSFM* 386
Score = 131 bits (281), Expect = 6e-030
Identities = 64/120 (53%), Positives = 75/120 (62%)
Frame = +1 / -1
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS R F A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 385 HIKDQFINMKTMQWVLSSSFRXFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 206
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE C S+F S+
Sbjct: 205 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASEWCQSSFSTDSL 26
>gb|BQ654722.1|BQ654722 NXRV084_G12_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA
clone NXRV084_G12 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 549
Score = 221 bits (477), Expect = 6e-057
Identities = 93/147 (63%), Positives = 114/147 (77%)
Frame = -1 / +3
Query: 887 EVGSGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 708
E+GS + ++ N RSVLTIAFQF++ENHLRE+VA+MARQYVR VVASVQRVAM
Sbjct: 108 EIGSAGARTSVDYGGNSGNLRSVLTIAFQFTFENHLRENVASMARQYVRGVVASVQRVAM 287
Query: 707 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHS 528
A+APSR+G L + PG+PEA TLARW+ +SYRFH G ELLR +++ ++ LK LW HS
Sbjct: 288 ALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHS 467
Query: 527 DSIMCCSLKAAPVFTFANQAGLDMLET 447
D+IMCCSL + PVFTFANQAGLDM T
Sbjct: 468 DAIMCCSLXSLPVFTFANQAGLDMXXT 548
Score = 144 bits (309), Expect = 8e-034
Identities = 73/129 (56%), Positives = 80/129 (62%)
Frame = +1 / -3
Query: 448 VSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIH 627
V +MSRPA AKV TG +EQHM+ SE C S F S+ RSS P WNL*L
Sbjct: 547 VXNMSRPA*FAKVKTGNXXKEQHMMASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQ 368
Query: 628 LASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCLAMAATLSRR*FSYENWK 807
A V ASG PG C P REGA AMATLCTDATT TY AM AT SR+ FS NWK
Sbjct: 367 RARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRTY*RAMDATFSRKWFSKVNWK 188
Query: 808 AMVSTDLVL 834
A+V+TDL L
Sbjct: 187 AIVNTDLRL 161
>gb|CO368658.1|CO368658 RTK1_42_B01.b1_A029 Roots minus potassium Pinus taeda cDNA clone
RTK1_42_B01_A029 3', mRNA sequence
Length = 558
Score = 217 bits (468), Expect = 1e-055
Identities = 80/122 (65%), Positives = 107/122 (87%)
Frame = -1 / +1
Query: 569 QCTDASLKALWQHSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGR 390
+ +++ LK LW HSD+IMCC +K+ PVFTFANQAGLDMLETT +ALQDISL+KILD++GR
Sbjct: 4 EASESVLKLLWHHSDAIMCCFVKSLPVFTFANQAGLDMLETTFVALQDISLDKILDENGR 183
Query: 389 KALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSF 210
K+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ C+ FMF+NWSF
Sbjct: 184 KSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTQCIVFMFMNWSF 363
Query: 209 V* 204
+*
Sbjct: 364 M* 369
Score = 128 bits (274), Expect = 6e-029
Identities = 62/120 (51%), Positives = 75/120 (62%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 368 HIKDQFINMKTMHWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 189
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASV 564
P SS+I S+++S A +VVSSMS PA A V TG F +QHMI SE C S+F S+
Sbjct: 188 LLRPFSSKILSKDISCNATNVVSSMSNPA*FANVKTGNDFTKQHMIASEWCQSSFSTDSL 9
>gb|BQ696330.1|BQ696330 NXPV_040_B04_F NXPV (Nsf Xylem Planings wood Vertical) Pinus taeda
cDNA clone NXPV_040_B04 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 543
Score = 216 bits (466), Expect = 2e-055
Identities = 91/148 (61%), Positives = 112/148 (75%)
Frame = -1 / +3
Query: 887 EVGSGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 708
E+GS + ++ N RSVLTIAFQF++ENHLRE+VA+MARQYVR VVASVQRVAM
Sbjct: 99 EIGSAGARTSVDYGGNSGNLRSVLTIAFQFTFENHLRENVASMARQYVRGVVASVQRVAM 278
Query: 707 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHS 528
A+APSR+G L + PG+PEA TLARW+ +SYRFH G ELLR +++ ++ LK LW HS
Sbjct: 279 ALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHS 458
Query: 527 DSIMCCSLKAAPVFTFANQAGLDMLETT 444
D+IMCCSLK+ PVFTFAN LDM T
Sbjct: 459 DAIMCCSLKSLPVFTFANXXXLDMXXXT 542
Score = 138 bits (295), Expect = 7e-032
Identities = 71/130 (54%), Positives = 77/130 (59%)
Frame = +1 / -3
Query: 445 VVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPI 624
V MS AKV TG F+EQHM+ SE C S F S+ RSS P WNL*L
Sbjct: 541 VXXXMSXXXXFAKVKTGNDFKEQHMMASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QT 362
Query: 625 HLASVCASGDPGVCFISSCPPMREGAIAMATLCTDATTVLTYCLAMAATLSRR*FSYENW 804
A V ASG PG C P REGA AMATLCTDATT TY AM AT SR+ FS NW
Sbjct: 361 QRARVSASGVPGGSLGPRCEPSREGARAMATLCTDATTPRTY*RAMDATFSRKWFSKVNW 182
Query: 805 KAMVSTDLVL 834
KA+V+TDL L
Sbjct: 181 KAIVNTDLRL 152
>gb|AW736869.1|AW736869 NXNV_083_H08_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA
clone NXNV_083_H08 5' similar to Arabidopsis thaliana
sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 389
Score = 209 bits (451), Expect = 2e-053
Identities = 81/123 (65%), Positives = 102/123 (82%)
Frame = -1 / +2
Query: 659 PGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMCCSLKAAPVFTF 480
PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD+IMCCS+K+ PVFTF
Sbjct: 14 PGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSDAIMCCSVKSLPVFTF 193
Query: 479 ANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRP 300
ANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMG
Sbjct: 194 ANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGXX 373
Query: 299 VSY 291
Y
Sbjct: 374 AXY 382
Score = 119 bits (254), Expect = 3e-026
Identities = 61/118 (51%), Positives = 72/118 (61%)
Frame = +1 / -3
Query: 307 PMLDTHTPPGRYAKPCCIILGYSVQSAFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKV 486
P+L+ H P GR A PC II SV+ P SSRI S+++S A +VVSSMS PA A V
Sbjct: 366 PILERHIPAGR*A*PC*II*P*SVKKLLRPFSSRILSKDISCNATNVVSSMSNPA*FANV 187
Query: 487 NTGAAFREQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPG 660
TG F EQHMI SE C S+F S+ S R S P+W+L*L I A V ASG PG
Sbjct: 186 KTGNDFTEQHMIASEWCQSSFSTDSLASQSARNRSTPMWSL*L*QIQRARVSASGVPG 13
>gb|CF476401.1|CF476401 RTWW3_1_A12.b1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_1_A12_A022 3', mRNA sequence
Length = 537
Score = 207 bits (447), Expect = 8e-053
Identities = 77/110 (70%), Positives = 100/110 (90%)
Frame = -1 / +1
Query: 533 HSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQ 354
HSD+IMCCS+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+Q
Sbjct: 1 HSDAIMCCSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQ 180
Query: 353 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
QG+AYLP G+C+SSMGRP SY++A+AWKVL+D+D+ HC+ F F+NWS +*
Sbjct: 181 QGYAYLPAGICLSSMGRPASYDRAIAWKVLNDEDSTHCIVFRFMNWSLM* 330
Score = 123 bits (263), Expect = 2e-027
Identities = 60/109 (55%), Positives = 70/109 (64%)
Frame = +1 / -2
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF N+K Q +SSS RTF A A SY+ G P+L+ H P GR A PC II SV+
Sbjct: 329 HIKDQFINLKTMQWVLSSSFRTFQAIARSYEAGLPILERHIPAGR*A*PC*II*P*SVKK 150
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESE 531
P SSRI S+++S A +VVSSMS PA A V TG F EQHMI SE
Sbjct: 149 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDFTEQHMIASE 3
>gb|CF470607.1|CF470607 RTDS1_13_D09.g1_A015 Drought-stressed loblolly pine roots DS1 Pinus
taeda cDNA clone RTDS1_13_D09_A015 5', mRNA sequence
Length = 784
Score = 196 bits (423), Expect = 2e-049
Identities = 82/133 (61%), Positives = 103/133 (77%)
Frame = -1 / +3
Query: 887 EVGSGXTTRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAM 708
E+GS + ++ N RSVLTIAFQF++ENHLRE+VA+MARQYVR VVASVQRVAM
Sbjct: 384 EIGSAGARTSVDYGGNSGNLRSVLTIAFQFTFENHLRENVASMARQYVRGVVASVQRVAM 563
Query: 707 AIAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHS 528
A+APSR+G L + PG+PEA TLARW+ +SYRFH G ELLR +++ ++ LK LW HS
Sbjct: 564 ALAPSRLGSHLGPRLPPGTPEALTLARWVCQSYRFHLGVELLRPNSEVNESLLKTLWHHS 743
Query: 527 DSIMCCSLKAAPV 489
D+IMCCSLK+ PV
Sbjct: 744 DAIMCCSLKSLPV 782
Score = 128 bits (275), Expect = 4e-029
Identities = 65/115 (56%), Positives = 71/115 (61%)
Frame = +1 / -1
Query: 490 TGAAFREQHMIESECCHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCF 669
TG F+EQHM+ SE C S F S+ RSS P WNL*L A V ASG PG
Sbjct: 781 TGNDFKEQHMMASEWCQSVFSRDSLTSELGLRSSTPKWNL*L*QTQRARVSASGVPGGSL 602
Query: 670 ISSCPPMREGAIAMATLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDLVL 834
C P REGA AMATLCTDATT TY AM AT SR+ FS NWKA+V+TDL L
Sbjct: 601 GPRCEPSREGARAMATLCTDATTPRTY*RAMDATFSRKWFSKVNWKAIVNTDLRL 437
>gb|DR168719.1|DR168719 RTPHOS1_27_H08.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_27_H08_A029 3', mRNA sequence
Length = 713
Score = 188 bits (405), Expect(2) = 4e-048
Identities = 75/161 (46%), Positives = 108/161 (67%)
Frame = -1 / +1
Query: 692 RIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSDSIMC 513
R+G L ++ G+ E L + I SYR + G +LLR + K +W HSD+++C
Sbjct: 31 RVGSTLGLRNLSGTTEVLALVQRIVGSYRINFGMDLLRKQPSNDEELFKMVWHHSDALIC 210
Query: 512 CSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLP 333
C+ K+ P F FAN+A LDMLETT L D+ ++ LD+ +K +++ K+MQQGFAYLP
Sbjct: 211 CTCKSLPEFIFANEAALDMLETTSGGLHDLRWDQTLDETEKKNAYSDFTKVMQQGFAYLP 390
Query: 332 GGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSF 210
G+ +SSMGRPV+YE+A+AW V +D++ C+AFMFVNWSF
Sbjct: 391 AGIRLSSMGRPVAYERAMAWSVANDNERMPCVAFMFVNWSF 513
Score = 107 bits (228), Expect = 1e-022
Identities = 62/148 (41%), Positives = 77/148 (52%)
Frame = +1 / -1
Query: 214 DQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSAFL 393
DQ TNMKA +S SL T HA A S TGRP+L+ P GRYA PCCI L S + F
Sbjct: 509 DQLTNMKATHGILSLSLATLHAIALS*ATGRPILERRIPAGRYANPCCITLVKSE*AFFF 330
Query: 394 PSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAFREQHMIESECCHSAFKEASVHWV 573
SSR+ S S + VVSS+S+ A A +N+G QH+ SE C + K +S
Sbjct: 329 SVSSRV*SHLRSCKPPDVVSSISKAASFANMNSGNDLHVQHIRASEWCQTILKSSSSFEG 150
Query: 574 SVRRSSAPVWNL*LLPIHLASVCASGDP 657
+ S P + L*L I S S P
Sbjct: 149 CFLKRSIPKFIL*LPTIRWTSARTSVVP 66
Score = 24.0 bits (46), Expect(2) = 4e-048
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -1 / +1
Query: 725 VQRVAMAIAP 696
VQRVAMAIAP
Sbjct: 1 VQRVAMAIAP 30
>gb|CF393740.1|CF393740 RTDS2_1_A05.b1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_A05_A021 3', mRNA sequence
Length = 573
Score = 187 bits (403), Expect = 9e-047
Identities = 70/100 (70%), Positives = 92/100 (92%)
Frame = -1 / +2
Query: 503 KAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGV 324
K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G+
Sbjct: 2 KSLPVFTFANQAGLDMLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGI 181
Query: 323 CVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
C+SSMGRP S+++A+AWKVL+D+D+ HC+ FMF+NWSF+*
Sbjct: 182 CLSSMGRPASHDRAIAWKVLNDEDSTHCIVFMFMNWSFM* 301
Score = 105 bits (223), Expect = 6e-022
Identities = 53/100 (53%), Positives = 62/100 (62%)
Frame = +1 / -1
Query: 205 HTKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQS 384
H KDQF NMK Q +SSS RTF A A S + G P+L+ H P GR A PC II SV+
Sbjct: 300 HIKDQFINMKTMQWVLSSSFRTFQAIARSCEAGLPILERHIPAGR*A*PC*II*P*SVKK 121
Query: 385 AFLPSSSRIFSREMSWRAISVVSSMSRPAWLAKVNTGAAF 504
P SSRI S+++S A +VVSSMS PA A V TG F
Sbjct: 120 LLRPFSSRILSKDISCNATNVVSSMSNPA*FANVKTGNDF 1
>gb|BE496570.1|BE496570 NXCI_020_G05_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_020_G05 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 461
Score = 186 bits (401), Expect = 2e-046
Identities = 71/94 (75%), Positives = 86/94 (91%)
Frame = -1 / +3
Query: 485 TFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMG 306
TFAN GLDMLETTL+ALQDISLEKILDD+GRK+ C++ +IMQQG+AYLP GVCVSSMG
Sbjct: 3 TFANXXGLDMLETTLVALQDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMG 182
Query: 305 RPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV* 204
RP SY++A+AWKVL+D++ PHC+AFMF+NWSFV*
Sbjct: 183 RPASYDRAIAWKVLNDEENPHCIAFMFMNWSFV* 284
Score = 119 bits (255), Expect = 2e-026
Identities = 56/93 (60%), Positives = 62/93 (66%)
Frame = +1 / -2
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF NM A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 280 TKDQFINMNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 101
Query: 388 FLPSSSRIFSREMSWRAISVVSSMSRPAWLAKV 486
P SS IFS ++S +A VVS+MSRP AKV
Sbjct: 100 LRPLSSSIFSNDISCKATRVVSNMSRPXXFAKV 2
>gb|BE810198.1|BE810198 NXCI_061_C04_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_061_C04 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 372
Score = 181 bits (390), Expect = 6e-045
Identities = 73/123 (59%), Positives = 94/123 (76%)
Frame = -1 / +3
Query: 704 IAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSD 525
IAPSR+ + + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD
Sbjct: 3 IAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSD 182
Query: 524 SIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGF 345
+IMCCS+K+ PVFTFANQA LDMLETTL+ALQDIS +KILD + RK+ T+Y +I+Q +
Sbjct: 183 AIMCCSVKSLPVFTFANQAXLDMLETTLVALQDISXDKILDXNXRKSFFTDYGQIIQXXY 362
Query: 344 AYL 336
AYL
Sbjct: 363 AYL 371
>gb|BE520016.1|BE520016 NXCI_028_B08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus
taeda cDNA clone NXCI_028_B08 5' similar to Arabidopsis
thaliana sequence At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 348
Score = 170 bits (366), Expect = 1e-041
Identities = 69/112 (61%), Positives = 87/112 (77%)
Frame = -1 / +3
Query: 704 IAPSRIGGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQHSD 525
IAPSR+ + + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW HSD
Sbjct: 3 IAPSRLNSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHHSD 182
Query: 524 SIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEY 369
+IMC S+K+ PVFTFANQAGLDMLETTL+ALQDISL+KILD++ RK+ T Y
Sbjct: 183 AIMCXSVKSLPVFTFANQAGLDMLETTLVALQDISLDKILDENXRKSFFTXY 338
>gb|CO165410.1|CO165410 FLD1_54_H04.b1_A029 Root flooded Pinus taeda cDNA clone
FLD1_54_H04_A029 3', mRNA sequence
Length = 840
Score = 170 bits (365), Expect = 2e-041
Identities = 71/112 (63%), Positives = 87/112 (77%)
Frame = -1 / -1
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 336 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 157
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALWQH 531
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW H
Sbjct: 156 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLWHH 1
Score = 102 bits (218), Expect = 3e-021
Identities = 54/111 (48%), Positives = 68/111 (61%)
Frame = +1 / +2
Query: 535 CHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMA 714
C S+F S+ S R S P+W+L*L I A V ASG PG +C REGAIAMA
Sbjct: 5 CQSSFSTDSLASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMA 184
Query: 715 TLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
TL TDATT+ TY A+AAT SR+ S NW A+V+TDL +++ S + V
Sbjct: 185 TLWTDATTLRTY*RAIAATFSRKWLS*VNWNAIVNTDLRFELVPESPDVLV 337
>gb|CO361058.1|CO361058 NDL2_2_H09.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_2_H09_A029 3', mRNA sequence
Length = 764
Score = 167 bits (359), Expect = 1e-040
Identities = 63/86 (73%), Positives = 78/86 (90%)
Frame = -1 / +1
Query: 461 DMLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQA 282
DMLETTL+AL DISLEKILDD+GRK+ C++ +IMQQG+AYLP GVCVSSMGRP SY++A
Sbjct: 1 DMLETTLVALPDISLEKILDDNGRKSFCSDIAQIMQQGYAYLPAGVCVSSMGRPASYDRA 180
Query: 281 VAWKVLSDDDTPHCLAFMFVNWSFV* 204
+AWKVL+D++ PHC+AF F+NWSFV*
Sbjct: 181 IAWKVLNDEENPHCIAFTFMNWSFV* 258
Score = 105 bits (224), Expect = 4e-022
Identities = 49/84 (58%), Positives = 56/84 (66%)
Frame = +1 / -1
Query: 208 TKDQFTNMKARQCGVSSSLRTFHATACSYDTGRPMLDTHTPPGRYAKPCCIILGYSVQSA 387
TKDQF N+ A Q G SSSLRTF A A S + G PML+THTP GR A PCCII S Q
Sbjct: 254 TKDQFINVNAMQWGFSSSLRTFQAIALS*EAGLPMLETHTPAGR*AYPCCII*AISEQKL 75
Query: 388 FLPSSSRIFSREMSWRAISVVSSM 459
P SS IFS ++S +A VVS+M
Sbjct: 74 LRPLSSSIFSNDISGKATRVVSNM 3
>gb|CF393839.1|CF393839 RTDS2_1_A05.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus
taeda cDNA clone RTDS2_1_A05_A021 5', mRNA sequence
Length = 806
Score = 166 bits (357), Expect = 2e-040
Identities = 70/110 (63%), Positives = 86/110 (78%)
Frame = -1 / +2
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N RSVLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 458 TRTSGDSGTSSNLRSVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 637
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQCTDASLKALW 537
+ + PG+PEA TLARWI +SYR H G +L R D + +++ LK LW
Sbjct: 638 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCEASESVLKLLW 787
Score = 102 bits (218), Expect = 3e-021
Identities = 54/111 (48%), Positives = 68/111 (61%)
Frame = +1 / -3
Query: 535 CHSAFKEASVHWVSVRRSSAPVWNL*LLPIHLASVCASGDPGVCFISSCPPMREGAIAMA 714
C S+F S+ S R S P+W+L*L I A V ASG PG +C REGAIAMA
Sbjct: 789 CQSSFSTDSLASQSARNRSTPMWSL*L*QIQRARVSASGVPGGGLGPTCEFSREGAIAMA 610
Query: 715 TLCTDATTVLTYCLAMAATLSRR*FSYENWKAMVSTDLVLQVLXXSLEARV 867
TL TDATT+ TY A+AAT SR+ S NW A+V+TDL +++ S + V
Sbjct: 609 TLWTDATTLRTY*RAIAATFSRKWLS*VNWNAIVNTDLRFELVPESPDVLV 457
>gb|AW626638.1|AW626638 NXNV067G01 Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone
NXNV067G01 5' similar to Arabidopsis thaliana sequence
At1g52150 putative protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 380
Score = 158 bits (340), Expect = 4e-038
Identities = 58/85 (68%), Positives = 78/85 (91%)
Frame = -1 / +3
Query: 458 MLETTLIALQDISLEKILDDDGRKALCTEYPKIMQQGFAYLPGGVCVSSMGRPVSYEQAV 279
MLETTL+ALQDISL+KILD++GRK+ T+Y +I+QQG+AYLP G+C+SSMGRP SY++A+
Sbjct: 3 MLETTLVALQDISLDKILDENGRKSFFTDYGQIIQQGYAYLPAGICLSSMGRPASYDRAI 182
Query: 278 AWKVLSDDDTPHCLAFMFVNWSFV* 204
AWKVL+D+D+ HC+ FMF+NWSF+*
Sbjct: 183 AWKVLNDEDSTHCIVFMFMNWSFM* 257
>gb|CF476510.1|CF476510 RTWW3_1_A12.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_1_A12_A022 5', mRNA sequence
Length = 468
Score = 152 bits (326), Expect = 4e-036
Identities = 65/100 (65%), Positives = 78/100 (78%)
Frame = -1 / +3
Query: 866 TRASSDXXSTCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRVAMAIAPSRI 687
TR S D ++ N R VLTIAFQF+YE+HLRE+VAAMARQYVR+VVASVQRVAMAIAPSR+
Sbjct: 168 TRTSGDSGTSSNLRYVLTIAFQFTYESHLRENVAAMARQYVRSVVASVQRVAMAIAPSRL 347
Query: 686 GGQLEMKQTPGSPEAHTLARWIGRSYRFHTGAELLRTDTQ 567
+ + PG+PEA TLARWI +SYR H G +L R D +
Sbjct: 348 NSHVGPRPPPGTPEALTLARWICQSYRLHIGVDLFRADCE 467
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 527,011,024
Number of Sequences: 355925
Number of extensions: 8825889
Number of successful extensions: 73045
Number of sequences better than 1.0e-020: 84
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 12961936240
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)