TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440806.2.2
(1155 letters)
Database: Pinus_nucl_with_EST.fasta
355,925 sequences; 217,277,237 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DR161157.1|DR161157 RTFE1_10_E01.b1_A029 Roots minus iro... 296 1e-093
gb|CO362033.1|CO362033 NDL2_8_E07.g1_A029 Needles control 2... 299 2e-093
gb|CF401342.1|CF401342 RTWW1_11_C09.g1_A015 Well-watered lo... 320 9e-087
gb|CO171062.1|CO171062 NDL1_18_F08.g1_A029 Needles control ... 320 9e-087
gb|CO200608.1|CO200608 GEO2_8_A10.g1_A032 Root gravitropism... 317 8e-086
gb|DR117495.1|DR117495 RTMG1_7_G09.b1_A029 Roots minus magn... 317 8e-086
gb|BM133679.1|BM133679 NXLV_010_G02_F NXLV (Nsf Xylem Late ... 316 2e-085
gb|CO201745.1|CO201745 RTCNT2_7_G09.g1_A029 Root control 2 ... 270 7e-085
gb|DR117422.1|DR117422 RTMG1_6_H01.g1_A029 Roots minus magn... 307 6e-084
gb|CF400305.1|CF400305 RTWW1_4_F08.g1_A015 Well-watered lob... 295 6e-084
gb|CF402753.1|CF402753 RTWW1_22_G07.g1_A015 Well-watered lo... 308 3e-083
gb|CF671517.1|CF671517 RTCNT1_57_D05.g1_A029 Root control P... 308 5e-083
gb|CF401295.1|CF401295 RTWW1_11_C07.g1_A015 Well-watered lo... 306 2e-082
gb|CF401713.1|CF401713 RTWW1_14_C04.g1_A015 Well-watered lo... 303 9e-082
gb|DR097479.1|DR097479 STRR1_34_H05.g3_A033 Stem Response R... 303 1e-081
gb|CF390665.1|CF390665 RTDR2_20_H04.g1_A021 Loblolly pine r... 281 2e-081
gb|DR120859.1|DR120859 RTMG1_32_A06.g1_A029 Roots minus mag... 256 6e-081
gb|BX255698.1|BX255698 BX255698 Pinus pinaster differenciat... 299 2e-080
gb|DR097773.1|DR097773 STRR1_36_H05.g3_A033 Stem Response R... 299 3e-080
gb|DR071311.1|DR071311 RTDK1_19_C02.b1_A029 Roots, dark Pin... 251 3e-080
gb|CF478684.1|CF478684 RTWW3_16_H09.g1_A022 Well-watered lo... 297 1e-079
gb|CF400336.1|CF400336 RTWW1_4_C07.g1_A015 Well-watered lob... 296 2e-079
gb|CV033562.1|CV033562 RTNACL1_35_F12.b1_A029 Roots plus ad... 296 2e-079
gb|DR168990.1|DR168990 RTPHOS1_29_E12.b1_A029 Roots minus p... 296 2e-079
gb|CF402186.1|CF402186 RTWW1_20_F02.g1_A015 Well-watered lo... 295 5e-079
gb|CF478224.1|CF478224 RTWW3_19_G08.g1_A022 Well-watered lo... 293 2e-078
gb|DR161241.1|DR161241 RTFE1_10_E01.g1_A029 Roots minus iro... 292 3e-078
gb|AL751061.1|AL751061 AL751061 RS Pinus pinaster cDNA clon... 285 4e-076
gb|CV033540.1|CV033540 RTNACL1_35_D11.b1_A029 Roots plus ad... 281 5e-075
gb|DR746198.1|DR746198 RTCU1_35_H02.b1_A029 Roots plus adde... 236 5e-075
gb|CF670977.1|CF670977 RTCNT1_53_H01.g1_A029 Root control P... 281 6e-075
gb|CV033650.1|CV033650 RTNACL1_35_F12.g1_A029 Roots plus ad... 275 4e-073
gb|CF389614.1|CF389614 RTDR2_8_D07.g1_A021 Loblolly pine ro... 248 1e-071
gb|CO199504.1|CO199504 GEO2_1_E01.g1_A032 Root gravitropism... 269 3e-071
gb|DR100690.1|DR100690 STRR1_66_H02.g1_A033 Stem Response R... 269 3e-071
gb|CF665374.1|CF665374 RTCNT1_15_D05.g1_A029 Root control P... 236 3e-070
gb|DR069223.1|DR069223 RTDK1_5_E09.g1_A029 Roots, dark Pinu... 264 6e-070
gb|CF399982.1|CF399982 RTWW1_2_B02.g1_A015 Well-watered lob... 215 3e-068
gb|CO361957.1|CO361957 NDL2_8_E07.b1_A029 Needles control 2... 257 1e-067
gb|CX713137.1|CX713137 RTPQ1_7_F01.b1_A032 Roots treated wi... 257 1e-067
gb|DR017596.1|DR017596 STRS1_17_G04.b1_A034 Shoot tip pitch... 256 2e-067
gb|CF669425.1|CF669425 RTCNT1_43_G02.b1_A029 Root control P... 195 2e-067
gb|BM367381.1|BM367381 NXLV_048_E03_F NXLV (Nsf Xylem Late ... 252 4e-066
gb|DR097388.1|DR097388 STRR1_34_H05.b1_A033 Stem Response R... 249 2e-065
gb|CF400507.1|CF400507 RTWW1_5_D03.g1_A015 Well-watered lob... 249 3e-065
gb|CF473597.1|CF473597 RTWW2_3_C02.g1_A021 Well-watered lob... 246 2e-064
gb|DR019720.1|DR019720 STRS1_32_A09.b1_A034 Shoot tip pitch... 218 3e-064
gb|BX250981.1|BX250981 BX250981 Pinus pinaster differenciat... 245 5e-064
gb|CR354745.1|CR354745 CR354745 Pinus pinaster differenciat... 242 5e-063
gb|CX647323.1|CX647323 COLD1_15_G01.b1_A029 Root cold Pinus... 188 6e-063
gb|CF665030.1|CF665030 RTCNT1_13_A07.g1_A029 Root control P... 241 9e-063
gb|DR023301.1|DR023301 STRS1_56_E08.g1_A034 Shoot tip pitch... 240 2e-062
gb|BQ696543.1|BQ696543 NXPV_042_E02_F NXPV (Nsf Xylem Plani... 211 2e-062
gb|AL750621.1|AL750621 AL750621 RN Pinus pinaster cDNA clon... 237 8e-062
gb|CO366790.1|CO366790 RTK1_30_C11.b1_A029 Roots minus pota... 237 1e-061
gb|BG040297.1|BG040297 NXSI_110_G02_F NXSI (Nsf Xylem Side ... 234 1e-060
gb|CO174502.1|CO174502 NDL1_44_A03.g1_A029 Needles control ... 232 5e-060
gb|BQ633895.1|BQ633895 NXRV062_B09_F NXRV (Nsf Xylem Root w... 146 3e-059
gb|CO369134.1|CO369134 RTK1_45_E02.b1_A029 Roots minus pota... 228 5e-059
gb|DR023486.1|DR023486 STRS1_58_B05.b1_A034 Shoot tip pitch... 228 6e-059
gb|BX254536.1|BX254536 BX254536 Pinus pinaster differenciat... 224 8e-058
gb|CF401071.1|CF401071 RTWW1_9_G03.g1_A015 Well-watered lob... 223 2e-057
gb|CO170986.1|CO170986 NDL1_18_F08.b1_A029 Needles control ... 221 8e-057
gb|AW754904.1|AW754904 PC08B10 Pine TriplEx pollen cone lib... 219 4e-056
gb|DR386187.1|DR386187 RTHG1_13_B03.g1_A029 Roots plus adde... 212 4e-054
gb|BF049728.1|BF049728 NXCI_106_D04_F NXCI (Nsf Xylem Compr... 211 6e-054
gb|CF474497.1|CF474497 RTWW2_9_G09.b1_A021 Well-watered lob... 189 9e-054
gb|DR177419.1|DR177419 RTMNUT1_5_F01.b1_A029 Roots minus mi... 210 2e-053
gb|CF670903.1|CF670903 RTCNT1_53_H01.b1_A029 Root control P... 209 3e-053
gb|CO200240.1|CO200240 GEO2_6_F04.b1_A032 Root gravitropism... 209 4e-053
gb|BE761988.1|BE761988 NXCI_075_F07_F NXCI (Nsf Xylem Compr... 208 8e-053
gb|BQ198210.1|BQ198210 NXLV128_A12_F NXLV (Nsf Xylem Late w... 185 3e-052
gb|DR745814.1|DR745814 RTCU1_32_E09.g1_A029 Roots plus adde... 205 5e-052
gb|CF472577.1|CF472577 RTDS1_10_A06.g1_A015 Drought-stresse... 164 1e-050
gb|DR742971.1|DR742971 RTCU1_8_E01.g2_A029 Roots plus added... 198 6e-050
gb|DR097687.1|DR097687 STRR1_36_H05.b1_A033 Stem Response R... 197 1e-049
gb|CO201671.1|CO201671 RTCNT2_7_G09.b1_A029 Root control 2 ... 186 2e-046
gb|BX250283.1|BX250283 BX250283 Pinus pinaster differenciat... 184 8e-046
gb|CF474563.1|CF474563 RTWW2_9_G09.g1_A021 Well-watered lob... 136 1e-045
gb|CF401635.1|CF401635 RTWW1_14_C04.b1_A015 Well-watered lo... 181 1e-044
gb|BE662271.1|BE662271 ST84/ST84A04 Pine TriplEx shoot tip ... 180 2e-044
gb|CF385204.1|CF385204 RTDR1_2_G08.g1_A015 Loblolly pine ro... 97 2e-044
gb|CF401104.1|CF401104 RTWW1_10_B05.b1_A015 Well-watered lo... 103 3e-044
gb|AW985282.1|AW985282 NXNV_135_D01_F Nsf Xylem Normal wood... 177 1e-043
gb|CX651681.1|CX651681 COLD1_54_C07.b1_A029 Root cold Pinus... 172 4e-042
gb|AW064989.1|AW064989 ST38C07 Pine TriplEx shoot tip libra... 145 5e-042
gb|CF402095.1|CF402095 RTWW1_20_F02.b1_A015 Well-watered lo... 171 6e-042
gb|CF401168.1|CF401168 RTWW1_10_B05.g1_A015 Well-watered lo... 96 1e-041
gb|BE241357.1|BE241357 NXNV_186_H07_F Nsf Xylem Normal wood... 169 4e-041
gb|BX254296.1|BX254296 BX254296 Pinus pinaster differenciat... 166 2e-040
gb|BF220841.1|BF220841 NXCI_154_E09_F NXCI (Nsf Xylem Compr... 149 3e-035
gb|CF389343.1|CF389343 RTDR2_7_H11.b1_A021 Loblolly pine ro... 148 9e-035
gb|DR048046.1|DR048046 RTBOR1_6_F07.b2_A029 Roots plus adde... 96 1e-033
gb|AL751028.1|AL751028 AL751028 RS Pinus pinaster cDNA clon... 92 1e-033
gb|BG039718.1|BG039718 NXSI_103_C07_F NXSI (Nsf Xylem Side ... 99 2e-033
gb|AW065014.1|AW065014 ST38F01 Pine TriplEx shoot tip libra... 142 6e-033
gb|CF400248.1|CF400248 RTWW1_4_C07.b1_A015 Well-watered lob... 83 7e-033
gb|BX680185.1|BX680185 BX680185 RS Pinus pinaster cDNA clon... 95 1e-032
gb|BM158766.1|BM158766 NXLV_038_B05_F NXLV (Nsf Xylem Late ... 141 1e-032
gb|AW698214.1|AW698214 NXNV_070_A01_F Nsf Xylem Normal wood... 138 7e-032
gb|CD027822.1|CD027822 NXNV_070_A01 Nsf Xylem Normal wood V... 138 7e-032
gb|DR180809.1|DR180809 RTMNUT1_35_A12.b1_A029 Roots minus m... 138 7e-032
gb|CF471824.1|CF471824 RTDS1_7_C12.b1_A015 Drought-stressed... 100 2e-031
gb|BQ291291.1|BQ291291 NXRV058_D01_F NXRV (Nsf Xylem Root w... 84 6e-030
gb|AW698213.1|AW698213 NXNV_070_A02_F Nsf Xylem Normal wood... 130 2e-029
gb|CD027823.1|CD027823 NXNV_070_A02 Nsf Xylem Normal wood V... 130 2e-029
gb|BQ699768.1|BQ699768 NXRV128_F12_F NXRV (Nsf Xylem Root w... 69 6e-029
gb|CF477967.1|CF477967 RTWW3_17_E11.b1_A022 Well-watered lo... 128 8e-029
gb|DR023697.1|DR023697 STRS1_59_A03.g1_A034 Shoot tip pitch... 100 1e-028
gb|AW698057.1|AW698057 NXNV_078_C05_F Nsf Xylem Normal wood... 126 3e-028
gb|BE810207.1|BE810207 NXCI_061_D08_F NXCI (Nsf Xylem Compr... 73 1e-026
gb|DR683957.1|DR683957 EST1074033 Normalized pine embryo li... 76 2e-026
gb|BQ701060.1|BQ701060 NXRV115_A06_F NXRV (Nsf Xylem Root w... 119 4e-026
gb|BQ197748.1|BQ197748 NXLV115_E01_F NXLV (Nsf Xylem Late w... 116 4e-025
gb|CD027993.1|CD027993 NXNV_144_B09_F Nsf Xylem Normal wood... 115 6e-025
gb|CF389587.1|CF389587 RTDR2_8_D07.b1_A021 Loblolly pine ro... 110 3e-023
gb|BF169643.1|BF169643 NXCI_125_F11_F NXCI (Nsf Xylem Compr... 109 3e-023
gb|BX255271.1|BX255271 BX255271 Pinus pinaster differenciat... 68 4e-023
gb|BQ291170.1|BQ291170 NXRV056_G07_F NXRV (Nsf Xylem Root w... 68 5e-023
gb|CF471932.1|CF471932 RTDS1_7_C12.g1_A015 Drought-stressed... 97 2e-021
gb|DR689988.1|DR689988 EST1080074 Normalized pine embryo li... 47 4e-021
gb|DT633426.1|DT633426 EST1148357 Normalized pine embryo li... 67 5e-021
gb|BQ697346.1|BQ697346 NXPV_053_A10_F NXPV (Nsf Xylem Plani... 73 5e-021
gb|DR686230.1|DR686230 EST1076308 Normalized pine embryo li... 67 7e-021
>gb|DR161157.1|DR161157 RTFE1_10_E01.b1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_E01_A029 3', mRNA sequence
Length = 799
Score = 296 bits (641), Expect(2) = 1e-093
Identities = 113/187 (60%), Positives = 139/187 (74%)
Frame = +2 / -1
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 568 DCKPGGNAMVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAI 389
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 388 TISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 209
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+GD+M+NG
Sbjct: 208 THWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNG 29
Query: 719 AFFNESG 739
AFF +SG
Sbjct: 28 AFFTQSG 8
Score = 206 bits (444), Expect(2) = 4e-060
Identities = 102/189 (53%), Positives = 116/189 (61%)
Frame = -1 / +3
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H L + G S LVTSL GA RLPWL++VGF LPP+
Sbjct: 9 PD*VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPI 188
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SLFTTWK P R G+RCTSP PKWL A VTC+ S S L P SIT S
Sbjct: 189 AYISQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCD 368
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
LL+ V+AVDP S+SPS QLD + WS L ETPSPSL V P*C ES M
Sbjct: 369 I*LLEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLTMA 548
Query: 198 PECALESWM 172
L+SWM
Sbjct: 549 FPPGLQSWM 575
Score = 68.4 bits (143), Expect(2) = 1e-093
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +2 / -1
Query: 5 DRPLWIVFARDMVIELRQELIVNHNKTIDGRGAQVHI 115
+ PLWI+F RDMVI+L++ELI+N KTIDGRGA VHI
Sbjct: 745 NEPLWIIFERDMVIQLKEELIMNSYKTIDGRGANVHI 635
Score = 46.4 bits (95), Expect(2) = 4e-060
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -3 / +2
Query: 115 DVHLRAPPVDRLVVVHDQLLPQLDHHVAREHDPQRPV 5
DV + A VD LV VHD+LL +LD HV+ + DPQR V
Sbjct: 635 DVDIGASAVDCLVTVHDKLLFELDDHVSLKDDPQRLV 745
>gb|CO362033.1|CO362033 NDL2_8_E07.g1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_E07_A029 5', mRNA sequence
Length = 753
Score = 299 bits (647), Expect(2) = 2e-093
Identities = 114/194 (58%), Positives = 141/194 (72%)
Frame = +2 / +3
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 171 DCKPGGNAMVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAI 350
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 351 TISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 530
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+GD+M+NG
Sbjct: 531 THWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNG 710
Query: 719 AFFNESGGQNERKY 760
AFF +SG + Y
Sbjct: 711 AFFTQSGAASSSSY 752
Score = 206 bits (444), Expect(2) = 3e-059
Identities = 102/189 (53%), Positives = 116/189 (61%)
Frame = -1 / -3
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H L + G S LVTSL GA RLPWL++VGF LPP+
Sbjct: 730 PD*VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPI 551
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SLFTTWK P R G+RCTSP PKWL A VTC+ S S L P SIT S
Sbjct: 550 AYISQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCD 371
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
LL+ V+AVDP S+SPS QLD + WS L ETPSPSL V P*C ES M
Sbjct: 370 I*LLEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLTMA 191
Query: 198 PECALESWM 172
L+SWM
Sbjct: 190 FPPGLQSWM 164
Score = 64.8 bits (135), Expect(2) = 2e-093
Identities = 25/34 (73%), Positives = 30/34 (88%)
Frame = +2 / +3
Query: 14 LWIVFARDMVIELRQELIVNHNKTIDGRGAQVHI 115
LWI+F RDMVI+L++ELI+N KTIDGRGA VHI
Sbjct: 3 LWIIFERDMVIQLKEELIMNSYKTIDGRGANVHI 104
Score = 43.7 bits (89), Expect(2) = 3e-059
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -3 / -2
Query: 115 DVHLRAPPVDRLVVVHDQLLPQLDHHVAREHDPQ 14
DV + A VD LV VHD+LL +LD HV+ + DPQ
Sbjct: 104 DVDIGASAVDCLVTVHDKLLFELDDHVSLKDDPQ 3
>gb|CF401342.1|CF401342 RTWW1_11_C09.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_11_C09_A015 5', mRNA sequence
Length = 779
Score = 320 bits (694), Expect = 9e-087
Identities = 125/227 (55%), Positives = 157/227 (69%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 8 DCKPGGNAMVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAI 187
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 188 TISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 367
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+GD+M+NG
Sbjct: 368 THWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNG 547
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
AFF +SG + Y + + A+ V LT +AG L+C G C*
Sbjct: 548 AFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 688
Score = 211 bits (455), Expect = 8e-054
Identities = 112/225 (49%), Positives = 128/225 (56%)
Frame = -1 / -3
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 675 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 496
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 495 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 316
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QLD
Sbjct: 315 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLD 136
Query: 306 MDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALESWM 172
+ WS L ETPSPSL V P*C ES M L+SWM
Sbjct: 135 KEQWSTQILFAPKMETPSPSLLVLHP*CVGESLTMAFPPGLQSWM 1
>gb|CO171062.1|CO171062 NDL1_18_F08.g1_A029 Needles control Pinus taeda cDNA clone
NDL1_18_F08_A029 5', mRNA sequence
Length = 802
Score = 320 bits (694), Expect = 9e-087
Identities = 125/227 (55%), Positives = 157/227 (69%)
Frame = +2 / +1
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 43 DCKPGGNAMVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAI 222
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 223 TISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 402
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+GD+M+NG
Sbjct: 403 THWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNG 582
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
AFF +SG + Y + + A+ V LT +AG L+C G C*
Sbjct: 583 AFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 723
Score = 211 bits (455), Expect = 8e-054
Identities = 112/225 (49%), Positives = 128/225 (56%)
Frame = -1 / -3
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 710 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 531
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 530 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 351
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QLD
Sbjct: 350 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLD 171
Query: 306 MDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALESWM 172
+ WS L ETPSPSL V P*C ES M L+SWM
Sbjct: 170 KEQWSTQILFAPKMETPSPSLLVLHP*CVGESLTMAFPPGLQSWM 36
>gb|CO200608.1|CO200608 GEO2_8_A10.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_8_A10_A032 5', mRNA sequence
Length = 865
Score = 317 bits (687), Expect = 8e-086
Identities = 123/219 (56%), Positives = 155/219 (70%)
Frame = +2 / -1
Query: 203 MIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFT 382
M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAIT+SN++ +
Sbjct: 856 MVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMS 677
Query: 383 DHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAI 562
HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDYTHW MYAI
Sbjct: 676 QHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 497
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGG 742
GG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+GD+M+NGAFF +SG
Sbjct: 496 GGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGA 317
Query: 743 QNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
+ Y + + A+ V LT +AG L+C G C*
Sbjct: 316 ASSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 200
Score = 203 bits (438), Expect = 2e-051
Identities = 108/215 (50%), Positives = 123/215 (57%)
Frame = -1 / +3
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 213 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 392
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 393 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 572
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QLD
Sbjct: 573 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLD 752
Query: 306 MDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIM 202
+ WS L ETPSPSL V P*C ES M
Sbjct: 753 KEQWSTQILFAPKMETPSPSLLVLHP*CVGESLTM 857
>gb|DR117495.1|DR117495 RTMG1_7_G09.b1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_7_G09_A029 3', mRNA sequence
Length = 878
Score = 317 bits (687), Expect = 8e-086
Identities = 123/219 (56%), Positives = 155/219 (70%)
Frame = +2 / +2
Query: 203 MIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFT 382
M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAIT+SN++ +
Sbjct: 2 MVRDSPTHYGWRTRSDEDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMS 181
Query: 383 DHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAI 562
HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDYTHW MYAI
Sbjct: 182 QHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 361
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGG 742
GG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+GD+M+NGAFF +SG
Sbjct: 362 GGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGA 541
Query: 743 QNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
+ Y + + A+ V LT +AG L+C G C*
Sbjct: 542 ASSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 658
Score = 199 bits (430), Expect = 2e-050
Identities = 107/215 (49%), Positives = 122/215 (56%)
Frame = -1 / -3
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 645 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 466
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 465 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 286
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QLD
Sbjct: 285 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLD 106
Query: 306 MDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIM 202
+ WS L ETPS SL V P*C ES M
Sbjct: 105 KEQWSTQILFAPKMETPSSSLLVLHP*CVGESLTM 1
>gb|BM133679.1|BM133679 NXLV_010_G02_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_010_G02 5' similar to Arabidopsis thaliana
sequence At4g24780 pectate lyase like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 807
Score = 316 bits (685), Expect = 2e-085
Identities = 122/223 (54%), Positives = 154/223 (69%)
Frame = +2 / +3
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 39 DCKPGGNAMVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAI 218
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN++ + HD VML G S+D QD MQ T+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 219 TISNNYMSQHDKVMLLGHSDDYTQDVNMQATIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 398
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+GD+M+NG
Sbjct: 399 THWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNG 578
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVG 847
AFF +SG + Y + + A+ V LT +AG L+C G
Sbjct: 579 AFFTQSGAASSSSYAKXSSLAARPSSLVSSLTTYAGVLQCXAG 707
Score = 208 bits (448), Expect = 8e-053
Identities = 111/225 (49%), Positives = 126/225 (56%)
Frame = -1 / -3
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 706 PAXHCRTPAYVVREETRDEGLAARLEXLA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 527
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 526 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 347
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CTSP PKWL A V C+ S S L P SIT S LL+ V+AVDP S+SPS QLD
Sbjct: 346 CTSPSPKWLKAIVACMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLD 167
Query: 306 MDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALESWM 172
+ WS L ETPSPSL V P*C ES M L+SWM
Sbjct: 166 KEQWSTQILFAPKMETPSPSLLVLHP*CVGESLTMAFPPGLQSWM 32
>gb|CO201745.1|CO201745 RTCNT2_7_G09.g1_A029 Root control 2 (late) Pinus taeda cDNA clone
RTCNT2_7_G09_A029 5', mRNA sequence
Length = 837
Score = 270 bits (585), Expect(2) = 7e-085
Identities = 106/171 (61%), Positives = 125/171 (73%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RT N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 323 DCKPAGNAMVRDSPTHYGWRTISDGDGVSIFGASNIWVDHCSLSSCTDGLIDAIRGSTAI 502
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+ T HD VML G ++D QD MQVTVAFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 503 TISNNFMTHHDKVMLLGHNDDYTQDVNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDY 682
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWK 691
THW MYAIGG+ NPTI SQGNRF+APD ++KEVTKREYT +K+W W+
Sbjct: 683 THWEMYAIGGSANPTINSQGNRFLAPDYHSSKEVTKREYTAESVWKQWNWR 835
Score = 205 bits (443), Expect(2) = 2e-058
Identities = 100/174 (57%), Positives = 111/174 (63%)
Frame = -1 / -1
Query: 693 DFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWK 514
D H +L VYSR VTSL SGA RLPWL++VGF LPPMAY+ Q V*SLFTT K
Sbjct: 837 DLQFHCFHTLSAVYSRFVTSLEE**SGARNRLPWLLIVGFALPPMAYISQWV*SLFTT*K 658
Query: 513 KP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTT 334
P R G+RCTSP PKWL ATVTC+ S S L PNSIT SW V L + V+AVDP
Sbjct: 657 *PCRHLGMRCTSPSPKWLKATVTCMLTSWV*SSLWPNSITLSWWVIKLFEIVIAVDPLMA 478
Query: 333 SISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALESWM 172
S+SPS QLD + WS LL ETPSPSL V P*C ES M L+SWM
Sbjct: 477 SMSPSVQLDKEQWSTQILLAPKMETPSPSLIVLHP*CVGESLTMAFPAGLQSWM 316
Score = 64.8 bits (135), Expect(2) = 7e-085
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +2 / +2
Query: 11 PLWIVFARDMVIELRQELIVNHNKTIDGRGAQVHI 115
PLWI F RDMVI+L++ELI+N KTIDGRG VHI
Sbjct: 152 PLWITFERDMVIQLKEELIMNSYKTIDGRGVNVHI 256
Score = 41.4 bits (84), Expect(2) = 2e-058
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = -3 / -3
Query: 115 DVHLRAPPVDRLVVVHDQLLPQLDHHVAREHDPQR 11
+V + A VD LV VHD+L +LD HV+ + DPQR
Sbjct: 256 NVDIDASAVDCLVAVHDKLFFELDDHVSLKGDPQR 152
>gb|DR117422.1|DR117422 RTMG1_6_H01.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_6_H01_A029 5', mRNA sequence
Length = 826
Score = 307 bits (665), Expect(2) = 6e-084
Identities = 123/226 (54%), Positives = 155/226 (68%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RT ++W+DHVS+S+C+DGLID + GSTAI
Sbjct: 101 DCKPAGNAMVRDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAI 280
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SNS+FT H+ VML G S+ D M+VT+A+NHFG GL+QRMPRCR+G+FHVVNNDY
Sbjct: 281 TISNSYFTHHNEVMLLGHSDGYTPDVNMRVTIAYNHFGEGLMQRMPRCRHGYFHVVNNDY 460
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP +P AKEVTKR Y ++K W W+S+GD+M+NG
Sbjct: 461 THWEMYAIGGSANPTINSQGNRFLAPANPFAKEVTKRVYGDLDEWKNWNWRSKGDLMLNG 640
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC 856
A+F SG Y + +PA+ VG LT+ AG L C G C
Sbjct: 641 AYFTPSGAAASSTYVKASSLPARSSSLVGPLTQNAGVLFCRKGVRC 778
Score = 192 bits (413), Expect = 5e-048
Identities = 104/223 (46%), Positives = 123/223 (55%)
Frame = -1 / -2
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P + S PA VS PT LAG +Y+ PD +K APF + SP D S
Sbjct: 768 PFLQKSTPAFWVSGPTRLEDLAGRLDAFTYVEDAAAPDGVKYAPFSIRSPFDLQFQFFHS 589
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
Y+R VTS A G +GA LP L++VGF LPP+AY+ Q V*SLFTTWK P GIR
Sbjct: 588 SKSPYTRFVTSFAKGFAGAKNLLP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGIR 409
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
C P PKWL A VT I S L PN+IT W VK L + VMAV+P S+ PS QLD
Sbjct: 408 CIRPSPKWLYAIVTRIFTSGV*PSL*PNNITSLW*VK*LFEMVMAVEPMMASMRPSAQLD 229
Query: 306 MDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALES 178
+TWS L + E PSPS V P*C ES + L+S
Sbjct: 228 KETWSTQM*LPPNMEIPSPSQIVLHP*CVGESLTIAFPAGLQS 100
Score = 24.9 bits (48), Expect(2) = 6e-084
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 83 TIDGRGAQVHI 115
TIDGRG VHI
Sbjct: 2 TIDGRGVNVHI 34
>gb|CF400305.1|CF400305 RTWW1_4_F08.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_4_F08_A015 5', mRNA sequence
Length = 763
Score = 295 bits (639), Expect(2) = 6e-084
Identities = 118/211 (55%), Positives = 145/211 (68%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+S+C+DGLID + GSTAI
Sbjct: 131 DCKPAGNAMVRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAILGSTAI 310
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+ T HD VML G S++ QD MQVTVAFNHFG GLVQR+PRCR+G+FHVVNNDY
Sbjct: 311 TISNNFMTHHDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDY 490
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S GD+M+NG
Sbjct: 491 THWEMYAIGGSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRQWNWRSDGDLMLNG 670
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQL 811
AFF +SG Y + + AK VG L
Sbjct: 671 AFFTQSGAAASSSYAKASSLAAKPSSLVGSL 763
Score = 219 bits (473), Expect(2) = 2e-057
Identities = 102/189 (53%), Positives = 118/189 (62%)
Frame = -1 / -2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H +L G S VTSL +GA RLPWL++VG LPP+
Sbjct: 690 PD*VKNAPFNIRSPSDLQFHCRHALSGASSCFVTSLEKRLTGARNRLPWLLIVGLALPPI 511
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R G+RCTSP PKWL ATVTC+ SC S L P S+T SW V
Sbjct: 510 AYISQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCV 331
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
L + V+AVDP S+SPS Q D + S LL ETPSPSL V P*C ES M
Sbjct: 330 IKLFEIVIAVDPRIASMSPSAQFDKEQ*STQILLPPKMETPSPSLLVLHP*CPGESLTMA 151
Query: 198 PECALESWM 172
L+SWM
Sbjct: 150 FPAGLQSWM 124
Score = 36.8 bits (74), Expect(2) = 6e-084
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2 / +2
Query: 53 RQELIVNHNKTIDGRGAQVHI 115
++ELI+N KTIDGRG VHI
Sbjct: 2 KEELIMNSYKTIDGRGVNVHI 64
Score = 24.4 bits (47), Expect(2) = 2e-057
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -3 / -1
Query: 115 DVHLRAPPVDRLVVVHDQL 59
+V + PVD LV +HD+L
Sbjct: 64 NVDIYTSPVDCLVTIHDKL 8
>gb|CF402753.1|CF402753 RTWW1_22_G07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_22_G07_A015 5', mRNA sequence
Length = 807
Score = 308 bits (668), Expect = 3e-083
Identities = 126/227 (55%), Positives = 153/227 (67%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+S+C+DGLID + GSTAI
Sbjct: 77 DCKPAGNAMVRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAILGSTAI 256
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+ T HD VML G S++ QD MQVTVAFNHFG GLVQR+PRCR+G+FHVVNNDY
Sbjct: 257 TISNNFMTHHDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDY 436
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S GD+M+NG
Sbjct: 437 THWEMYAIGGSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRQWNWRSDGDLMLNG 616
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
AFF +SG Y + + AK VG LT AG L C G C*
Sbjct: 617 AFFTQSGAAASSSYAKASSLAAKPSSLVGSLTGNAGVLACRXGTRC* 757
Score = 219 bits (473), Expect = 3e-056
Identities = 102/189 (53%), Positives = 118/189 (62%)
Frame = -1 / -1
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H +L G S VTSL +GA RLPWL++VG LPP+
Sbjct: 636 PD*VKNAPFNIRSPSDLQFHCRHALSGASSCFVTSLEKRLTGARNRLPWLLIVGLALPPI 457
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R G+RCTSP PKWL ATVTC+ SC S L P S+T SW V
Sbjct: 456 AYISQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCV 277
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
L + V+AVDP S+SPS Q D + S LL ETPSPSL V P*C ES M
Sbjct: 276 IKLFEIVIAVDPRIASMSPSAQFDKEQ*STQILLPPKMETPSPSLLVLHP*CPGESLTMA 97
Query: 198 PECALESWM 172
L+SWM
Sbjct: 96 FPAGLQSWM 70
>gb|CF671517.1|CF671517 RTCNT1_57_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_57_D05_A029 5', mRNA sequence
Length = 792
Score = 308 bits (667), Expect = 5e-083
Identities = 126/227 (55%), Positives = 153/227 (67%)
Frame = +2 / +1
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+S+C+DGLID + GSTAI
Sbjct: 52 DCKPAGNAMVRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAILGSTAI 231
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+ T HD VML G S++ QD MQVTVAFNHFG GLVQR+PRCR+G+FHVVNNDY
Sbjct: 232 TISNNFMTHHDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDY 411
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S GD+M+NG
Sbjct: 412 THWEMYAIGGSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRQWNWRSDGDLMLNG 591
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
AFF +SG Y + + AK VG LT AG L C G C*
Sbjct: 592 AFFTQSGAAASSSYAKASSLAAKPSSLVGSLTGNAGVLACRKGTRC* 732
Score = 219 bits (473), Expect = 3e-056
Identities = 102/189 (53%), Positives = 118/189 (62%)
Frame = -1 / -2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H +L G S VTSL +GA RLPWL++VG LPP+
Sbjct: 611 PD*VKNAPFNIRSPSDLQFHCRHALSGASSCFVTSLEKRLTGARNRLPWLLIVGLALPPI 432
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R G+RCTSP PKWL ATVTC+ SC S L P S+T SW V
Sbjct: 431 AYISQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCV 252
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
L + V+AVDP S+SPS Q D + S LL ETPSPSL V P*C ES M
Sbjct: 251 IKLFEIVIAVDPRIASMSPSAQFDKEQ*STQILLPPKMETPSPSLLVLHP*CPGESLTMA 72
Query: 198 PECALESWM 172
L+SWM
Sbjct: 71 FPAGLQSWM 45
>gb|CF401295.1|CF401295 RTWW1_11_C07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_11_C07_A015 5', mRNA sequence
Length = 755
Score = 306 bits (663), Expect = 2e-082
Identities = 123/220 (55%), Positives = 149/220 (67%)
Frame = +2 / +3
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+S+C+DGLID + GSTAI
Sbjct: 96 DCKPAGNAMVRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAIMGSTAI 275
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+ T HD VML G S++ QD MQVTVAFNHFG GLVQR+PRCR+G+FHVVNNDY
Sbjct: 276 TISNNFMTHHDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDY 455
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
HW MYAIGG+ NPTI SQGNRF+AP + +KEVTK EY P ++ W W+S GD+M+NG
Sbjct: 456 AHWEMYAIGGSANPTINSQGNRFLAPVNRFSKEVTKHEYAPESAWRRWNWRSDGDLMLNG 635
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKC 838
AFF +SG Y + + AK VG LT AG L C
Sbjct: 636 AFFTQSGAAASSSYAKASSLAAKPSSLVGSLTGNAGVLAC 755
Score = 233 bits (504), Expect = 1e-060
Identities = 105/189 (55%), Positives = 120/189 (63%)
Frame = -1 / -2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H +L G YS VTSL +GA RLPWL++VGF LPP+
Sbjct: 655 PD*VKNAPFNIRSPSDLQFHLRHALSGAYSCFVTSLEKRLTGARNRLPWLLIVGFALPPI 476
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QC *SLFTTWK P R G+RCTSP PKWL ATVTC+ SC S L P SIT SW V
Sbjct: 475 AYISQCA*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSITLSWCV 296
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
L + V+AVDP S+SPS Q D + WS LL ETPSPSL V P*C ES M
Sbjct: 295 IKLFEIVIAVDPMIASMSPSAQFDKEQWSTQILLPPKMETPSPSLLVLHP*CPGESLTMA 116
Query: 198 PECALESWM 172
L+SWM
Sbjct: 115 FPAGLQSWM 89
>gb|CF401713.1|CF401713 RTWW1_14_C04.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_14_C04_A015 5', mRNA sequence
Length = 733
Score = 303 bits (655), Expect(2) = 9e-082
Identities = 120/212 (56%), Positives = 148/212 (69%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+S+C+DGLID + GSTAI
Sbjct: 98 DCKPAGNAMVRDSPGHYGWRTRSDGDGVSIFGGSNIWVDHCSLSNCADGLIDAILGSTAI 277
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+ T HD+VML G S++ QD MQVTVAFNHFG GLVQR+PRCR+G+FHVVNNDY
Sbjct: 278 TISNNFMTHHDNVMLLGHSDEYMQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDY 457
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP D ++KEVTK E P +++W W+S GD+M+NG
Sbjct: 458 THWEMYAIGGSANPTINSQGNRFLAPVDRSSKEVTKHEDAPESAWRQWNWRSDGDLMLNG 637
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLT 814
AFF +SG Y + + AK VG LT
Sbjct: 638 AFFTQSGAAASSSYAKASSLAAKPSSLVGSLT 733
Score = 216 bits (466), Expect = 3e-055
Identities = 102/189 (53%), Positives = 118/189 (62%)
Frame = -1 / -2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H L +L G S VTS S+GA RLPWL++VG LPP+
Sbjct: 657 PD*VKNAPFNIRSPSDLQFHCLHALSGASSCFVTSFEERSTGARNRLPWLLIVGLALPPI 478
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R G+R TSP PKWL ATVTC+ SC S L P S+T SW V
Sbjct: 477 AYISQCV*SLFTTWK*PCRHLGMRWTSPSPKWLKATVTCMLTSCIYSSL*PRSMTLSWCV 298
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
L + V+AVDP S+SPS Q D + S LL ETPSPSL V P*C ES M
Sbjct: 297 IKLFEIVIAVDPRIASMSPSAQFDKEQ*STQILLPPKMETPSPSLLVLHP*CPGESLTMA 118
Query: 198 PECALESWM 172
L+SWM
Sbjct: 117 FPAGLQSWM 91
Score = 22.1 bits (42), Expect(2) = 9e-082
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 86 IDGRGAQVHI 115
IDGRG VH+
Sbjct: 2 IDGRGVNVHV 31
>gb|DR097479.1|DR097479 STRR1_34_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_34_H05_A033 5', mRNA sequence
Length = 799
Score = 303 bits (657), Expect = 1e-081
Identities = 123/227 (54%), Positives = 153/227 (67%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RT ++W+DHVS+S+C+DGLID + GSTAI
Sbjct: 59 DCKPAGNAMVRDSPTHYGWRTMCDGDGISIFEGSHIWVDHVSLSNCADGLIDAIMGSTAI 238
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+HFT H+ VML G S+ D MQ+T+A+NHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 239 TISNNHFTHHNEVMLLGHSDSYTPDVNMQITIAYNHFGEGLVQRMPRCRHGYFHVVNNDY 418
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF APD+ AKEVTKR +K+W W+S+GD+M+NG
Sbjct: 419 THWEMYAIGGSANPTINSQGNRFSAPDNSLAKEVTKRINKDADQWKDWNWRSKGDMMLNG 598
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
A+F SG Y + + A+ VG LT+ AG L C G C*
Sbjct: 599 AYFTPSGAGASSAYLKASSLEARPSTLVGPLTQNAGVLSCKKGTRC* 739
Score = 179 bits (386), Expect = 3e-044
Identities = 100/223 (44%), Positives = 117/223 (52%)
Frame = -1 / -2
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P + S PA VS PT LA Y PD +K AP + SP D S
Sbjct: 726 PFLQESTPAFWVSGPTSVEGLASRLDAFKYAEDAPAPDGVKYAPLSIISPFDLQFQSFH* 547
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
++ R VTSLA SGA P L++VGF LPP+AY+ Q V*SLFTTWK P GI
Sbjct: 546 SASLFIRFVTSLAKLLSGAENLFP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGIL 367
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CT P PKWL A V C+ S L PN+IT W VKWL + V+AVDP S+ PS QLD
Sbjct: 366 CTRPSPKWLYAIVICMLTSGV*LSL*PNNITSLW*VKWLFEMVIAVDPMMASMRPSAQLD 187
Query: 306 MDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALES 178
+T S L E PSPS V P*C ES + L+S
Sbjct: 186 KET*STQMWLPSKMEMPSPSHMVLHP*CVGESLTIAFPAGLQS 58
>gb|CF390665.1|CF390665 RTDR2_20_H04.g1_A021 Loblolly pine roots recovering from drought
DR2 Pinus taeda cDNA clone RTDR2_20_H04_A021 5', mRNA
sequence
Length = 704
Score = 281 bits (607), Expect(2) = 2e-081
Identities = 109/187 (58%), Positives = 138/187 (73%)
Frame = +2 / +3
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RT +VW+DHVS+++C+DGLID + STAI
Sbjct: 144 DCKPAGNAMVRDSPTHYGWRTICDGDGISIFGGSHVWVDHVSLANCADGLIDAIMASTAI 323
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SNS+FT+H+ VML G S+ D M+VTVA+NHFG GL+QRMPRC++G+FHVVNNDY
Sbjct: 324 TISNSYFTNHNEVMLLGHSDSYTPDVNMRVTVAYNHFGEGLIQRMPRCKHGYFHVVNNDY 503
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP +P+AKEVTKR Y +K W W+S+GD+M+NG
Sbjct: 504 THWEMYAIGGSANPTINSQGNRFLAPANPSAKEVTKRIYGDVDQWKYWNWRSKGDMMLNG 683
Query: 719 AFFNESG 739
A+F SG
Sbjct: 684 AYFVPSG 704
Score = 158 bits (340), Expect(2) = 3e-041
Identities = 82/159 (51%), Positives = 94/159 (59%)
Frame = -1 / -2
Query: 654 YSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSP 475
Y R VTS A G +GA LP L++VGF LPP+AY+ Q V*SLFTTWK P GIRC P
Sbjct: 619 YIRFVTSFAEGFAGAKNLLP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGIRCIRP 440
Query: 474 RPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTW 295
PKWL ATVT I S L PN+IT W VK L + V+AVD SI PS QL +TW
Sbjct: 439 SPKWLYATVTRIFTSGV*LSL*PNNITSLWLVK*LFEIVIAVDAMMASIRPSAQLAKETW 260
Query: 294 SIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALES 178
S T L + PSPS V P*C ES + L+S
Sbjct: 259 STQTWLPPKMDIPSPSQIVLHP*CVGESLTIAFPAGLQS 143
Score = 43.2 bits (88), Expect(2) = 2e-081
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 41 VIELRQELIVNHNKTIDGRGAQVHI 115
VI+L++ELI+N KTIDGRG VHI
Sbjct: 3 VIQLKEELIMNSYKTIDGRGVNVHI 77
Score = 30.9 bits (61), Expect(2) = 3e-041
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -3 / -1
Query: 115 DVHLRAPPVDRLVVVHDQLLPQLD 44
+V + P VD LV VHDQLL LD
Sbjct: 77 NVDINTPSVDCLVTVHDQLLL*LD 6
>gb|DR120859.1|DR120859 RTMG1_32_A06.g1_A029 Roots minus magnesium Pinus taeda cDNA clone
RTMG1_32_A06_A029 5', mRNA sequence
Length = 815
Score = 256 bits (554), Expect(2) = 6e-081
Identities = 98/174 (56%), Positives = 127/174 (72%)
Frame = +2 / +1
Query: 203 MIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFT 382
M+R S HYG RT +WIDH S+S+C DGLID + GSTAIT+SN++F+
Sbjct: 292 MVRASPEHYGWRTVSDGDGISIFGGRYIWIDHCSLSNCKDGLIDAIMGSTAITISNNYFS 471
Query: 383 DHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAI 562
HD VML G ++ DA+MQ+T+AFN+FG GL+QRMPRCR+G+FHVVNN Y HW MYAI
Sbjct: 472 HHDMVMLLGHADSYTNDAIMQITIAFNYFGEGLIQRMPRCRHGYFHVVNNQYAHWEMYAI 651
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAF 724
GG+ PTI S+GN FIAPD+ NAKEVTKR +++ +W W+S GD+M+NGA+
Sbjct: 652 GGSAKPTINSEGNIFIAPDNANAKEVTKRLDVVGEEWTQWNWRSAGDLMLNGAY 813
Score = 152 bits (327), Expect(2) = 4e-042
Identities = 87/185 (47%), Positives = 97/185 (52%)
Frame = -1 / -1
Query: 726 KKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMI 547
K AP + SP D H + S S LVTSLAL SGAM LP L+MVG LPP+AY+
Sbjct: 815 K*APLSIRSPADLQFHCVHSSPTTSSLLVTSLALALSGAMNMLPSLLMVGLALPPIAYIS 636
Query: 546 QCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLL 367
QC LFTT K P GI SP PK L A V CI AS P S+T SW K L
Sbjct: 635 QCAYWLFTT*KYPCLHLGIL*MSPSPK*LKAMVICIIASFV*LSACPRSMTMSWCEK*LF 456
Query: 366 DTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECA 187
+ VMAVDP SI PS QL+ + SI E PSPS V P*C E+ M
Sbjct: 455 EMVMAVDPMIASIRPSLQLEREQ*SIQI*RPPKIEIPSPSDTVLQP*CSGEALTMALPA* 276
Query: 186 LESWM 172
SWM
Sbjct: 275 THSWM 261
Score = 65.7 bits (137), Expect(2) = 6e-081
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +2 / +1
Query: 5 DRPLWIVFARDMVIELRQELIVNHNKTIDGRGAQVHI 115
D PLWI+F DMVI L++EL++N KTIDGRGA VHI
Sbjct: 91 DEPLWIIFQSDMVIRLKEELLMNSFKTIDGRGADVHI 201
Score = 40.0 bits (81), Expect(2) = 4e-042
Identities = 22/37 (59%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 114 MCTCAPRPSIVLLWFTISSCRSSITMSRANTIHSGRS 4
M T AP PSIVL F SS S +TMS N IHSG S
Sbjct: 200 M*TSAPLPSIVLKLFMRSSSLSLMTMSL*NIIHSGSS 90
>gb|BX255698.1|BX255698 BX255698 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP008G04 similar to PECTATE LYASE PRECURSOR,
mRNA sequence
Length = 667
Score = 299 bits (648), Expect = 2e-080
Identities = 115/203 (56%), Positives = 145/203 (71%)
Frame = +2 / +1
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 40 DCKPGGNTMVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAI 219
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 220 TISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 399
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+GD+M+NG
Sbjct: 400 THWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSEGDLMLNG 579
Query: 719 AFFNESGGQNERKYDRFDFIPAK 787
AFF +SG + Y + + A+
Sbjct: 580 AFFTQSGAASSSSYAKASSLAAR 648
Score = 205 bits (443), Expect = 4e-052
Identities = 102/189 (53%), Positives = 116/189 (61%)
Frame = -1 / -3
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H L + G S LVTSL GA RLPWL++VGF LPP+
Sbjct: 599 PD*VKNAPFNIRSPSDLQFHCLHAFSGASSCLVTSLENALLGARNRLPWLLIVGFALPPI 420
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SLFTTWK P R G+RCTSP PKWL A VTC+ S S L P SIT S
Sbjct: 419 AYISQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCD 240
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
LL+ V+AVDP S+SPS QLD + WS L ETPSPSL V P*C ES M
Sbjct: 239 I*LLEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPSPSLLVLHP*CVGESLTMV 60
Query: 198 PECALESWM 172
L+SWM
Sbjct: 59 FPPGLQSWM 33
>gb|DR097773.1|DR097773 STRR1_36_H05.g3_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_36_H05_A033 5', mRNA sequence
Length = 798
Score = 299 bits (647), Expect = 3e-080
Identities = 121/227 (53%), Positives = 152/227 (66%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RT ++W+DHVS+S+C+DGLID + GSTAI
Sbjct: 53 DCKPAGNAMVRDSPTHYGWRTMCDGDGISIFEGSHIWVDHVSLSNCADGLIDAIMGSTAI 232
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+S++HFT H+ VML G S+ D MQ+T+A+NHFG GLV RMPRCR+G+FHVVNNDY
Sbjct: 233 TISDNHFTHHNEVMLLGHSDSYTPDVNMQITIAYNHFGEGLVHRMPRCRHGYFHVVNNDY 412
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF APD+ AKEVTKR +K+W W+S+GD+M+NG
Sbjct: 413 THWEMYAIGGSANPTINSQGNRFSAPDNSLAKEVTKRINKDADQWKDWNWRSKGDMMLNG 592
Query: 719 AFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
A+F SG Y + + A+ VG LT+ AG L C G C*
Sbjct: 593 AYFTPSGAGASSAYLKASSLEARPSTLVGPLTQNAGVLSCKKGTRC* 733
Score = 178 bits (384), Expect = 5e-044
Identities = 100/223 (44%), Positives = 117/223 (52%)
Frame = -1 / -1
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P + S PA VS PT LA Y PD +K AP + SP D S
Sbjct: 720 PFLQESTPAFWVSGPTSVEGLASRLDAFKYAEDAPAPDGVKYAPLSIISPFDLQFQSFH* 541
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
++ R VTSLA SGA P L++VGF LPP+AY+ Q V*SLFTTWK P GI
Sbjct: 540 SASLFIRFVTSLAKLLSGAENLFP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGIL 361
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CT P PKWL A V C+ S L PN+IT W VKWL + V+AVDP S+ PS QLD
Sbjct: 360 CTRPSPKWLYAIVICMLTSGV*LSL*PNNITSLW*VKWLSEMVIAVDPMMASMRPSAQLD 181
Query: 306 MDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALES 178
+T S L E PSPS V P*C ES + L+S
Sbjct: 180 KET*STQMWLPSKMEMPSPSHMVLHP*CVGESLTIAFPAGLQS 52
>gb|DR071311.1|DR071311 RTDK1_19_C02.b1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_19_C02_A029 3', mRNA sequence
Length = 793
Score = 251 bits (543), Expect(2) = 3e-080
Identities = 98/156 (62%), Positives = 116/156 (74%)
Frame = +2 / -2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 471 DCKPGGNAMVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAI 292
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 291 TISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 112
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTK 646
THW MYAIGG+ NPTI SQGNRF+AP + +KEVTK
Sbjct: 111 THWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTK 4
Score = 181 bits (390), Expect(2) = 5e-052
Identities = 89/158 (56%), Positives = 100/158 (63%)
Frame = -1 / +2
Query: 645 LVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPRPK 466
LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+RCTSP PK
Sbjct: 5 LVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMRCTSPSPK 184
Query: 465 WLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTWSIH 286
WL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QLD + WS
Sbjct: 185 WLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLDKEQWSTQ 364
Query: 285 TLLDDSTETPSPSLRVRSP*CRFESRIMPPECALESWM 172
L ETPSPSL V P*C ES M L+SWM
Sbjct: 365 ILFAPKMETPSPSLLVLHP*CVGESLTMAFPPGLQSWM 478
Score = 68.4 bits (143), Expect(2) = 3e-080
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +2 / -2
Query: 5 DRPLWIVFARDMVIELRQELIVNHNKTIDGRGAQVHI 115
+ PLWI+F RDMVI+L++ELI+N KTIDGRGA VHI
Sbjct: 648 NEPLWIIFERDMVIQLKEELIMNSYKTIDGRGANVHI 538
Score = 44.1 bits (90), Expect(2) = 5e-052
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -3 / +1
Query: 115 DVHLRAPPVDRLVVVHDQLLPQLDHHVAREHDPQRPV 5
+V + A VD LV VHD+LL +LD HV+ + DPQR V
Sbjct: 538 NVDIGASAVDCLVTVHDKLLFELDDHVSLKDDPQRLV 648
>gb|CF478684.1|CF478684 RTWW3_16_H09.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_16_H09_A022 5', mRNA sequence
Length = 770
Score = 297 bits (643), Expect = 1e-079
Identities = 123/219 (56%), Positives = 149/219 (68%)
Frame = +2 / -3
Query: 203 MIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFT 382
M+RDS HYG RT ++W+DH S+SSC+ GLID + GSTAIT+SN+ T
Sbjct: 759 MVRDSPDHYGWRTISDGDGVSIFGASHIWVDHCSLSSCTVGLIDAIMGSTAITISNNFMT 580
Query: 383 DHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAI 562
HD VML G ++D D MQVTVAFNHFG GLVQRMPRCR+G+FHVVNNDYTHW MYAI
Sbjct: 579 HHDKVMLLGHNDDYTPDVNMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 400
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGG 742
GG+ NPTI SQGNRF+AP + +KEVTKREYTP ++ W W+S+GD+M+NGAFF SG
Sbjct: 399 GGSANPTINSQGNRFLAPVNRFSKEVTKREYTPKSIWRHWNWRSEGDLMLNGAFFVPSGM 220
Query: 743 QNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
Y + + A+ V LT AG L C G C*
Sbjct: 219 DVSTSYSKASSLSARPSFLVTSLTGNAGVLTCRKGSRC* 103
Score = 206 bits (445), Expect = 2e-052
Identities = 99/179 (55%), Positives = 112/179 (62%)
Frame = -1 / +2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD K APF + SP D L L+GVYSR VTSL +GA RLPWL++VGF LPPM
Sbjct: 224 PDGTKNAPFNIRSPSDLQFQCLHMLFGVYSRFVTSLEKRLTGARNRLPWLLIVGFALPPM 403
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R GI CT P PKWL ATVTC+ S S L P S+T SW V
Sbjct: 404 AYISQCV*SLFTTWK*PCRHLGILCTRPSPKWLKATVTCMLTSGV*SSLWPRSMTLSWCV 583
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIM 202
L + V+AVDP S+SP+ QLD + S L ETPSPSL V P* ES M
Sbjct: 584 IKLFEMVIAVDPIMASMSPTVQLDKEQ*STQIWLAPKMETPSPSLIVLHP**SGESLTM 760
>gb|CF400336.1|CF400336 RTWW1_4_C07.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_4_C07_A015 5', mRNA sequence
Length = 788
Score = 296 bits (641), Expect = 2e-079
Identities = 113/193 (58%), Positives = 144/193 (74%)
Frame = +2 / -3
Query: 281 NVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAF 460
N+W+DH S+SSC+DGLID + GSTAIT+SN++ + HD VML G S+D QD MQVT+AF
Sbjct: 780 NIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAF 601
Query: 461 NHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEV 640
NHFG GLVQRMPRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEV
Sbjct: 600 NHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEV 421
Query: 641 TKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRF 820
TK E P +++W W+S+GD+M+NGAFF +SG + Y + + A+ V LT +
Sbjct: 420 TKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTY 241
Query: 821 AGPLKCIVGQPC* 859
AG L+C G C*
Sbjct: 240 AGVLQCRAGSRC* 202
Score = 179 bits (385), Expect = 4e-044
Identities = 94/189 (49%), Positives = 109/189 (57%)
Frame = -1 / +2
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 215 PALHCRTPAYVVREETRDEGLAARLDALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 394
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 395 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 574
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QLD
Sbjct: 575 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLD 754
Query: 306 MDTWSIHTL 280
+ WS L
Sbjct: 755 KEQWSTQIL 781
>gb|CV033562.1|CV033562 RTNACL1_35_F12.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_F12_A029 3', mRNA sequence
Length = 812
Score = 296 bits (641), Expect = 2e-079
Identities = 113/193 (58%), Positives = 144/193 (74%)
Frame = +2 / +1
Query: 281 NVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAF 460
N+W+DH S+SSC+DGLID + GSTAIT+SN++ + HD VML G S+D QD MQVT+AF
Sbjct: 4 NIWVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAF 183
Query: 461 NHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEV 640
NHFG GLVQRMPRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEV
Sbjct: 184 NHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEV 363
Query: 641 TKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRF 820
TK E P +++W W+S+GD+M+NGAFF +SG + Y + + A+ V LT +
Sbjct: 364 TKHEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTY 543
Query: 821 AGPLKCIVGQPC* 859
AG L+C G C*
Sbjct: 544 AGVLQCRAGSRC* 582
Score = 179 bits (385), Expect = 4e-044
Identities = 94/189 (49%), Positives = 109/189 (57%)
Frame = -1 / -1
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 569 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 390
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 389 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 210
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QLD
Sbjct: 209 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLD 30
Query: 306 MDTWSIHTL 280
+ WS L
Sbjct: 29 KEQWSTQIL 3
>gb|DR168990.1|DR168990 RTPHOS1_29_E12.b1_A029 Roots minus phosphorous Pinus taeda cDNA
clone RTPHOS1_29_E12_A029 3', mRNA sequence
Length = 735
Score = 296 bits (641), Expect = 2e-079
Identities = 122/219 (55%), Positives = 148/219 (67%)
Frame = +2 / -1
Query: 203 MIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFT 382
M+R S HYG RT +VW+DH S+S+C+DGLID + STAIT+SN+HFT
Sbjct: 720 MVRSSPTHYGWRTMCDGDGVSIFGGSHVWVDHCSLSNCADGLIDAIMASTAITISNNHFT 541
Query: 383 DHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAI 562
HD VML G ++ D MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDYTHW MYAI
Sbjct: 540 HHDKVMLLGHNDAYAPDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAI 361
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGG 742
GG+ NPTI S+GNR++AP D AKEVTKR TP+ +K W W+SQGD+ +NGA+F SG
Sbjct: 360 GGSANPTINSEGNRYLAPVDRFAKEVTKRVETPHGRWKNWNWRSQGDLFLNGAYFINSGA 181
Query: 743 QNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
Y + + AK V LT AGPL C G C*
Sbjct: 180 GAASSYAKASSLGAKPASRVKFLTGNAGPLACRTGSRC* 64
Score = 165 bits (354), Expect = 7e-040
Identities = 86/179 (48%), Positives = 105/179 (58%)
Frame = -1 / +2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
P+ +K AP SP D +GV +R VTSLA S+GA P L++VG LPP+
Sbjct: 185 PELMKYAPLRNKSP*DLQFQFFHLPWGVSTRFVTSLAKRSTGARYLFPSLLIVGLALPPI 364
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SLFTT K P R G+RCT P PKWL A VTC+ S + L P S+T SW V
Sbjct: 365 AYISQ*V*SLFTT*KYPWRHLGMRCTRPSPKWLKAIVTCMFLSGA*ASLCPRSMTLSWWV 544
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIM 202
K L + V+AV+ S+SPS QL+ + S T L ETPSPS V P*C E R M
Sbjct: 545 K*LFEMVIAVEAMIASMSPSAQLESEQ*STQTWLPPKIETPSPSHIVLHP*CVGELRTM 721
>gb|CF402186.1|CF402186 RTWW1_20_F02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_20_F02_A015 5', mRNA sequence
Length = 785
Score = 295 bits (638), Expect = 5e-079
Identities = 122/219 (55%), Positives = 148/219 (67%)
Frame = +2 / +2
Query: 203 MIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFT 382
M+ DS HYG RTR N+WIDH S+S+CSDGLID V GSTAIT+SN+ T
Sbjct: 17 MVWDSPGHYGWRTRSDGDGVSIVGGSNIWIDHCSLSNCSDGLIDAVLGSTAITISNNFMT 196
Query: 383 DHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAI 562
HD VML G S++ QDA MQVTVAFNHFG GLVQR+PRCR+G+FHVVNNDYTHW MYAI
Sbjct: 197 HHDKVMLLGHSDEYVQDAKMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAI 376
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGG 742
GG+ NPTI SQGNRF+AP + +KEVTK E P ++ W W+S GD+++NGAFF ++G
Sbjct: 377 GGSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRRWNWRSDGDLLLNGAFFTQTGA 556
Query: 743 QNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
Y + + A V +T AG L C G C*
Sbjct: 557 AASSSYAKASSLAAMPSSLVVSITGNAGVLACRKGSRC* 673
Score = 230 bits (496), Expect = 2e-059
Identities = 104/176 (59%), Positives = 119/176 (67%)
Frame = -1 / -3
Query: 729 LKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYM 550
+KKAPF SP D H L +L G S VTSL +GA RLPWL++VGF LPP+AY+
Sbjct: 543 VKKAPFNNRSPSDLQFHRLHALSGASSCFVTSLEKRLTGARNRLPWLLIVGFALPPIAYI 364
Query: 549 IQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWL 370
QCV*SLFTTWK P R G+RCTSP PKWL ATVTCI ASC S L P S+T SW V L
Sbjct: 363 SQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCILASCTYSSLWPRSMTLSWCVIKL 184
Query: 369 LDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIM 202
+ V+AV+P T S+SPSEQ D + WSI LL + ETPSPSL V P*C ES M
Sbjct: 183 FEIVIAVEPRTASMSPSEQFDKEQWSIQILLPPTMETPSPSLLVLHP*CPGESHTM 16
>gb|CF478224.1|CF478224 RTWW3_19_G08.g1_A022 Well-watered loblolly pine roots WW3 Pinus
taeda cDNA clone RTWW3_19_G08_A022 5', mRNA sequence
Length = 764
Score = 293 bits (634), Expect = 2e-078
Identities = 119/216 (55%), Positives = 150/216 (69%)
Frame = +2 / +1
Query: 212 DSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHD 391
DS HYG RT +VW+DHVS+++C+DGLID + STAIT+SNS+FT+H+
Sbjct: 1 DSPTHYGCRTICDGDGISIFGGSHVWVDHVSLANCADGLIDAIMASTAITISNSYFTNHN 180
Query: 392 HVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGN 571
VML G S+ D M+VTVA+NHFG GL+QRMPRCR+G+FHVVNNDYTHW MYAIGG+
Sbjct: 181 EVMLLGHSDSYTPDVNMRVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGS 360
Query: 572 MNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNE 751
NPTI SQGNRF+AP +P+AKEVTKR Y +K W W+S+GD+M+NGA+F SG
Sbjct: 361 ANPTINSQGNRFLAPANPSAKEVTKRIYGHVDQWKYWNWRSKGDMMLNGAYFVPSGAGAS 540
Query: 752 RKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
Y + + A+ VG LT+ AG L C G C*
Sbjct: 541 SAYQKASSMEARPSSLVGSLTQNAGVLFCKKGARC* 648
Score = 157 bits (338), Expect(2) = 3e-041
Identities = 79/144 (54%), Positives = 88/144 (61%)
Frame = -1 / -1
Query: 654 YSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSP 475
Y R VTS A G +GA LP L+MVGF LPP+AY+ Q V*SLFTTWK P GIRC P
Sbjct: 443 YIRFVTSFAEGFAGAKNLLP*LLMVGFALPPIAYISQ*V*SLFTTWKYPCLHLGIRCIRP 264
Query: 474 RPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTW 295
PKWL ATVT I S L PN+IT W VK L + V+AVD SI PS QL +TW
Sbjct: 263 SPKWLYATVTRIFTSGV*LSL*PNNITSLWLVK*LFEIVIAVDAMMASIRPSAQLANETW 84
Query: 294 SIHTLLDDSTETPSPSLRVRSP*C 223
S T L + PSPS V P*C
Sbjct: 83 STQTWLPPKMDIPSPSQIVLHP*C 12
Score = 32.2 bits (64), Expect(2) = 3e-041
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = -1 / -1
Query: 879 PDRAAVY*HGWPTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTS 700
P R++ * P + S PA V PT LA M Y PD K APF + S
Sbjct: 668 PVRSSGV*QRAPFLQKSTPAF*VRDPTRLEGLASMLDAF*YAEDAPAPDGTKYAPFSIIS 489
Query: 699 PCD 691
P D
Sbjct: 488 PFD 480
>gb|DR161241.1|DR161241 RTFE1_10_E01.g1_A029 Roots minus iron Pinus taeda cDNA clone
RTFE1_10_E01_A029 5', mRNA sequence
Length = 791
Score = 292 bits (632), Expect = 3e-078
Identities = 112/191 (58%), Positives = 142/191 (74%)
Frame = +2 / -2
Query: 287 WIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNH 466
W+DH S+SSC+DGLID + GSTAIT+SN++ + HD VML G S+D QD MQVT+AFNH
Sbjct: 790 WVDHCSLSSCTDGLIDAIRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNH 611
Query: 467 FGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTK 646
FG GLVQRMPRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEVTK
Sbjct: 610 FGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTK 431
Query: 647 REYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAG 826
E P +++W W+S+GD+M+NGAFF +SG + Y + + A+ V LT +AG
Sbjct: 430 HEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAG 251
Query: 827 PLKCIVGQPC* 859
L+C G C*
Sbjct: 250 VLQCRAGSRC* 218
Score = 178 bits (383), Expect = 7e-044
Identities = 93/185 (50%), Positives = 108/185 (58%)
Frame = -1 / +3
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 231 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 410
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 411 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 590
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QLD
Sbjct: 591 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLD 770
Query: 306 MDTWS 292
+ WS
Sbjct: 771 KEQWS 785
>gb|AL751061.1|AL751061 AL751061 RS Pinus pinaster cDNA clone RS03F05 similar to PECTATE
LYASE, mRNA sequence
Length = 607
Score = 285 bits (617), Expect = 4e-076
Identities = 111/187 (59%), Positives = 137/187 (73%)
Frame = +2 / +2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RT ++W+DHVS+S+C+DGLID + GSTAI
Sbjct: 44 DCKPAGNAMVRDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAI 223
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SNS+FT H+ VML G S+ D M+VT+A+NHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 224 TISNSYFTHHNEVMLMGHSDSYTPDVNMRVTIAYNHFGEGLVQRMPRCRHGYFHVVNNDY 403
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQGDVMMNG 718
THW MYAIGG+ NPTI SQGNRF AP +P AKEVTKR Y ++K W W+S+GD+M+NG
Sbjct: 404 THWEMYAIGGSANPTINSQGNRFSAPANPFAKEVTKRVYGDVNEWKNWNWRSKGDLMLNG 583
Query: 719 AFFNESG 739
A+F SG
Sbjct: 584 AYFTPSG 604
Score = 175 bits (376), Expect = 7e-043
Identities = 91/187 (48%), Positives = 106/187 (56%)
Frame = -1 / -2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D S Y+R VTS A G +GA P L++VGF LPP+
Sbjct: 603 PDGVKYAPFSIRSPFDLQFQFFHSFTSPYTRFVTSFAKGFAGAENLFP*LLIVGFALPPI 424
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SL TTWK P GIRCT P PKWL A VT I S L P +IT W V
Sbjct: 423 AYISQ*V*SLLTTWKYPCLHLGIRCTRPSPKWLYAIVTRIFTSGV*LSL*PINITSLW*V 244
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMP 199
K L + V+AVDP S+ PS QLD +TWS L + E PSPS V P*C ES M
Sbjct: 243 K*LFEIVIAVDPMMASMRPSAQLDKETWSTQM*LPPNMEIPSPSQMVLHP*CVGESLTMA 64
Query: 198 PECALES 178
L+S
Sbjct: 63 FPAGLQS 43
>gb|CV033540.1|CV033540 RTNACL1_35_D11.b1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_D11_A029 3', mRNA sequence
Length = 876
Score = 281 bits (609), Expect = 5e-075
Identities = 116/193 (60%), Positives = 139/193 (72%)
Frame = +2 / +3
Query: 281 NVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAF 460
N+WIDH S+S+C+DGLID V GSTAIT+SN+ T HD VML G S++ QD MQVTVAF
Sbjct: 9 NIWIDHCSLSNCADGLIDAVLGSTAITISNNFMTHHDKVMLLGHSDEYMQDVNMQVTVAF 188
Query: 461 NHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEV 640
N FG GLVQR+PRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF AP +P +KEV
Sbjct: 189 NRFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFHAPVNPFSKEV 368
Query: 641 TKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRF 820
TK E ++EW W+S GD+M+NGAFF +SG Y + + AK VG LTR
Sbjct: 369 TKHEDALESVWREWNWRSNGDLMLNGAFFTQSGAAASSSYAKASSLAAKPSSLVGSLTRN 548
Query: 821 AGPLKCIVGQPC* 859
+G L C G C*
Sbjct: 549 SGVLVCRKGSRC* 587
Score = 198 bits (426), Expect = 8e-050
Identities = 89/154 (57%), Positives = 104/154 (67%)
Frame = -1 / -3
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D HSL +L S VTSL G +GA RLPWL++VGF LPP+
Sbjct: 466 PD*VKNAPFSIRSPFDLQFHSLHTLSSASSCFVTSLEKGLTGAWNRLPWLLIVGFALPPI 287
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R G+RCTSP PK L ATVTC+ SC S L P S+T SW V
Sbjct: 286 AYISQCV*SLFTTWK*PCRHLGMRCTSPSPKRLKATVTCMLTSCIYSSL*PRSMTLSWCV 107
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLL 277
L + V+AVDP T S+SPS Q D + WSI LL
Sbjct: 106 IKLFEIVIAVDPRTASMSPSAQFDKEQWSIQILL 5
>gb|DR746198.1|DR746198 RTCU1_35_H02.b1_A029 Roots plus added copper Pinus taeda cDNA clone
RTCU1_35_H02_A029 3', mRNA sequence
Length = 753
Score = 236 bits (510), Expect(2) = 5e-075
Identities = 92/152 (60%), Positives = 111/152 (73%)
Frame = +2 / -1
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D + M+RDS HYG RT +VW+DHVS+S+C+DGLID + GST I
Sbjct: 456 DCRPAGNAMVRDSPTHYGWRTISDGDGISIFGGSDVWVDHVSLSNCADGLIDAIMGSTGI 277
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SNSHFT HD +L GAS+ D M+VT+A+NHFG+GLVQRMPRCR+G+FHVVNNDY
Sbjct: 276 TISNSHFTHHDKAILLGASDSYTPDVKMRVTIAYNHFGKGLVQRMPRCRHGYFHVVNNDY 97
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAK 634
THW MYAIGG+ NPTI SQGNRF APD+ AK
Sbjct: 96 THWEMYAIGGSANPTINSQGNRFSAPDNALAK 1
Score = 166 bits (358), Expect(2) = 3e-048
Identities = 81/147 (55%), Positives = 90/147 (61%)
Frame = -1 / +2
Query: 618 SGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCI 439
SGA P L++VGF LPP+AY+ Q V*SLFTTWK P GI CT P PKWL A VT I
Sbjct: 17 SGAENLFP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGILCTRPLPKWLYAIVTRI 196
Query: 438 TASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTET 259
S LAPN+I SW VKWL + VM VDP S+ PS QLD DTWS HT L E
Sbjct: 197 LTSGV*LSLAPNNIALSW*VKWLFEMVMPVDPMMASMRPSAQLDNDTWSTHTSLPPKMEI 376
Query: 258 PSPSLRVRSP*CRFESRIMPPECALES 178
PSPSL V P*C ES + L+S
Sbjct: 377 PSPSLIVLHP*CVGESLTIAFPAGLQS 457
Score = 66.1 bits (138), Expect(2) = 5e-075
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2 / -1
Query: 11 PLWIVFARDMVIELRQELIVNHNKTIDGRGAQVHI 115
PLWI+F RDMVI+L++ELI+N KTIDGRG VHI
Sbjct: 627 PLWIIFQRDMVIQLKEELIMNSYKTIDGRGVNVHI 523
Score = 46.4 bits (95), Expect(2) = 3e-048
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -3 / +1
Query: 115 DVHLRAPPVDRLVVVHDQLLPQLDHHVAREHDPQ 14
+V + P VD LV VHDQ L +LD HV+ E DPQ
Sbjct: 523 NVDINTPSVDCLVTVHDQFLLELDDHVSLEDDPQ 624
>gb|CF670977.1|CF670977 RTCNT1_53_H01.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_53_H01_A029 5', mRNA sequence
Length = 640
Score = 281 bits (608), Expect = 6e-075
Identities = 115/193 (59%), Positives = 139/193 (72%)
Frame = +2 / +2
Query: 281 NVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAF 460
++W+DH S+SSC+DGLID + GSTAIT+SN+ T HD VML G ++D D MQVTVAF
Sbjct: 2 HIWVDHCSLSSCTDGLIDAIMGSTAITISNNFMTHHDKVMLLGHNDDYTPDVNMQVTVAF 181
Query: 461 NHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEV 640
NHFG GLVQRMPRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEV
Sbjct: 182 NHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPVNRFSKEV 361
Query: 641 TKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRF 820
TKREYTP ++ W W+S+GD+M+NGAFF SG Y + A+ V LT
Sbjct: 362 TKREYTPKSIWRHWNWRSKGDLMLNGAFFVPSGMDVSTSYSKASSPSARPSFLVTSLTGN 541
Query: 821 AGPLKCIVGQPC* 859
AG L C G C*
Sbjct: 542 AGVLTCRKGSRC* 580
Score = 191 bits (412), Expect = 7e-048
Identities = 86/146 (58%), Positives = 98/146 (67%)
Frame = -1 / -2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD K APF + SP D L L+GVYSR VTSL +GA RLPWL++VGF LPPM
Sbjct: 459 PDGTKNAPFNIRSPFDLQFQCLHMLFGVYSRFVTSLEKRLTGARNRLPWLLIVGFALPPM 280
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R GI CTSP PKWL ATVTC+ S S L P S+T SW V
Sbjct: 279 AYISQCV*SLFTTWK*PCRHLGILCTSPSPKWLKATVTCMLTSGV*SSLWPRSMTLSWCV 100
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMD 301
L + V+AVDP S+SPS QLD +
Sbjct: 99 IKLFEMVIAVDPIMASMSPSVQLDKE 22
>gb|CV033650.1|CV033650 RTNACL1_35_F12.g1_A029 Roots plus added NaCl Pinus taeda cDNA clone
RTNACL1_35_F12_A029 5', mRNA sequence
Length = 775
Score = 275 bits (595), Expect = 4e-073
Identities = 107/183 (58%), Positives = 135/183 (73%)
Frame = +2 / +2
Query: 311 SCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQR 490
SC+DGLID + GSTAIT+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQR
Sbjct: 14 SCTDGLIDAIRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQR 193
Query: 491 MPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKD 670
MPRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P
Sbjct: 194 MPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENA 373
Query: 671 YKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQ 850
+++W W+S+GD+M+NGAFF +SG + Y + + A+ V LT +AG L+C G
Sbjct: 374 WRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGS 553
Query: 851 PC* 859
C*
Sbjct: 554 RC* 562
Score = 168 bits (362), Expect = 6e-041
Identities = 90/179 (50%), Positives = 104/179 (58%)
Frame = -1 / -2
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 549 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 370
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 369 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 190
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQL 310
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP S+SPS QL
Sbjct: 189 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQL 13
>gb|CF389614.1|CF389614 RTDR2_8_D07.g1_A021 Loblolly pine roots recovering from drought DR2
Pinus taeda cDNA clone RTDR2_8_D07_A021 5', mRNA
sequence
Length = 638
Score = 248 bits (536), Expect(2) = 1e-071
Identities = 102/161 (63%), Positives = 116/161 (72%)
Frame = +2 / +3
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+WIDH S+S+CSDGLID V GSTAI
Sbjct: 144 DCKPAGNAMVRDSPGHYGWRTRSDGDGVSIVGGSNIWIDHCSLSNCSDGLIDAVLGSTAI 323
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+ T HD VML G S++ QD MQVTVAFNHFG GLVQR+PRCR+G+FHVVNNDY
Sbjct: 324 TISNNFMTHHDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHGYFHVVNNDY 503
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTP 661
THW MYAIGG+ NPTI SQGNRF AP + +KEVTK E P
Sbjct: 504 THWEMYAIGGSANPTINSQGNRFFAPVNRFSKEVTKHEDAP 626
Score = 215 bits (464), Expect = 5e-055
Identities = 96/166 (57%), Positives = 112/166 (67%)
Frame = -1 / -2
Query: 669 SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGI 490
+L G S VTSL +GA RLPWL++VGF LPP+AY+ QCV*SLFTTWK P R G+
Sbjct: 634 ALSGASSCFVTSLEKRLTGAKNRLPWLLIVGFALPPIAYISQCV*SLFTTWK*PCRHLGM 455
Query: 489 RCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQL 310
RCTSP PKWL ATVTC+ SC S L P S+T SW V L + V+AV+P T S+SPSEQ
Sbjct: 454 RCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCVIKLFEIVIAVEPRTASMSPSEQF 275
Query: 309 DMDTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALESWM 172
D + WSI LL + ETPSPSL V P*C ES M L+SWM
Sbjct: 274 DKEQWSIQILLPPTMETPSPSLLVLHP*CPGESLTMAFPAGLQSWM 137
Score = 43.2 bits (88), Expect(2) = 1e-071
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / +3
Query: 41 VIELRQELIVNHNKTIDGRGAQVHI 115
VI+L++EL +N KTIDGRGA VHI
Sbjct: 3 VIQLKEELFMNSYKTIDGRGANVHI 77
>gb|CO199504.1|CO199504 GEO2_1_E01.g1_A032 Root gravitropism October 2003 test Pinus taeda
cDNA clone GEO2_1_E01_A032 5', mRNA sequence
Length = 821
Score = 269 bits (581), Expect = 3e-071
Identities = 108/185 (58%), Positives = 136/185 (73%)
Frame = +2 / -1
Query: 305 MSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLV 484
+S+C+DGLID + GSTAIT+SNS+FT H+ VML G S+ D M+VT+A+NHFG GL+
Sbjct: 821 LSNCADGLIDAIMGSTAITISNSYFTHHNEVMLMGHSDSYTPDVNMRVTIAYNHFGEGLI 642
Query: 485 QRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPY 664
QRMPRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF AP +P AKEVTKR Y
Sbjct: 641 QRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFSAPANPFAKEVTKRVYGDV 462
Query: 665 KDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIV 844
+++K W W+S+GD+M+NGA+F SG Y + +PA+ VG LT+ AG L C
Sbjct: 461 EEWKNWNWRSKGDLMLNGAYFTPSGAGASSAYVKAASLPARPSSLVGPLTQTAGVLFCRK 282
Query: 845 GQPC* 859
G C*
Sbjct: 281 GVRC* 267
Score = 156 bits (335), Expect = 3e-037
Identities = 85/180 (47%), Positives = 100/180 (55%)
Frame = -1 / +1
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P + S PA VS PT LAG + +Y PD +K APF + SP D S
Sbjct: 280 PFLQNSTPAVWVSGPTRLEGLAGRLAAFTYAEDAPAPDGVKYAPFSIRSPFDLQFQFFHS 459
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
Y+R VTS A G +GA P L++VGF LPP+AY+ Q V*SLFTTWK P GIR
Sbjct: 460 STSPYTRFVTSFAKGFAGAENLFP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGIR 639
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLD 307
C P PKWL A VT I S L P +IT W VK L + V+AVDP S+ PS QLD
Sbjct: 640 CIRPSPKWLYAIVTRIFTSGV*LSL*PINITSLW*VK*LFEMVIAVDPMMASMRPSAQLD 819
>gb|DR100690.1|DR100690 STRR1_66_H02.g1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_66_H02_A033 5', mRNA sequence
Length = 816
Score = 269 bits (581), Expect = 3e-071
Identities = 105/184 (57%), Positives = 135/184 (73%)
Frame = +2 / +1
Query: 284 VWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFN 463
+W+DH S+S C+DGLID + GSTAIT+SN++FT HD VML G S+ QD +MQVT+AFN
Sbjct: 46 IWVDHCSLSKCNDGLIDAIMGSTAITISNNYFTHHDEVMLLGHSDSYVQDVIMQVTIAFN 225
Query: 464 HFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVT 643
+FG GL+QRMPRCR+G+FHVVNN Y HW MYAIGG+ NPTI S+GN+F+APDD NAKEVT
Sbjct: 226 YFGEGLIQRMPRCRHGYFHVVNNQYAHWEMYAIGGSANPTINSEGNKFLAPDDDNAKEVT 405
Query: 644 KREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFA 823
KR ++ +W W+S GD+M+NGAFF SG ++ Y + AK V +T A
Sbjct: 406 KRLDAGPDEWTQWNWRSAGDLMLNGAFFVASGAESTDSYALASSLGAKPVALVETITEEA 585
Query: 824 GPLK 835
G L+
Sbjct: 586 GVLQ 597
Score = 158 bits (340), Expect = 6e-038
Identities = 83/164 (50%), Positives = 94/164 (57%)
Frame = -1 / -2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD+ KKAPF + SP D H + S S LVTSLAL SSGA LP L++VG LPP+
Sbjct: 500 PDATKKAPFSIRSPADLQFHCVHSSGPASSLLVTSLALSSSGAKNLLPSLLIVGLALPPI 321
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QC LFTT K P R GI SP PK L A VTCI SC L P S+T S V
Sbjct: 320 AYISQCAYWLFTT*KYPCRHLGILWISPSPK*LKAIVTCIITSCT*LSL*PRSMTSS*CV 141
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPS 247
K L + VMAVDP SI PS L+ + WS E PSPS
Sbjct: 140 K*LFEMVMAVDPMIASIRPSLHLEREQWSTQI*RPPKIEMPSPS 9
>gb|CF665374.1|CF665374 RTCNT1_15_D05.g1_A029 Root control Pinus taeda cDNA clone
RTCNT1_15_D05_A029 5', mRNA sequence
Length = 583
Score = 236 bits (510), Expect(2) = 3e-070
Identities = 91/144 (63%), Positives = 107/144 (74%)
Frame = +2 / +3
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RTR N+W+DH S+SSC+DGLID + GSTAI
Sbjct: 150 DCKPGGNAMVRDSPTHYGWRTRSDGDGVSIFGANNIWVDHCSLSSCTDGLIDAIRGSTAI 329
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 330 TISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 509
Query: 539 THWIMYAIGGNMNPTIISQGNRFI 610
THW MYAIGG+ NPTI SQGNRF+
Sbjct: 510 THWEMYAIGGSANPTINSQGNRFL 581
Score = 172 bits (371), Expect(2) = 3e-046
Identities = 83/147 (56%), Positives = 94/147 (63%)
Frame = -1 / -1
Query: 612 AMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITA 433
A RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+RCTSP PKWL A VTC+
Sbjct: 583 ARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMRCTSPSPKWLKAIVTCMLT 404
Query: 432 SCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPS 253
S S L P SIT S LL+ V+AVDP S+SPS QLD + WS L ETPS
Sbjct: 403 S*V*SSLWPRSITLSCCDI*LLEMVIAVDPRMASMSPSVQLDKEQWSTQILFAPKMETPS 224
Query: 252 PSLRVRSP*CRFESRIMPPECALESWM 172
PSL V P*C ES M L+SWM
Sbjct: 223 PSLLVLHP*CVGESLTMAFPPGLQSWM 143
Score = 50.1 bits (103), Expect(2) = 3e-070
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +2 / +3
Query: 35 DMVIELRQELIVNHNKTIDGRGAQVHI 115
DMVI+L++ELI+N KTIDGRGA VHI
Sbjct: 3 DMVIQLKEELIMNSYKTIDGRGANVHI 83
Score = 33.6 bits (67), Expect(2) = 3e-046
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = -3 / -3
Query: 115 DVHLRAPPVDRLVVVHDQLLPQLDHHV 35
+V + A VD LV VHD+LL +LD HV
Sbjct: 83 NVDIGASAVDCLVTVHDKLLFELDDHV 3
>gb|DR069223.1|DR069223 RTDK1_5_E09.g1_A029 Roots, dark Pinus taeda cDNA clone
RTDK1_5_E09_A029 5', mRNA sequence
Length = 877
Score = 264 bits (572), Expect = 6e-070
Identities = 107/193 (55%), Positives = 133/193 (68%)
Frame = +2 / -2
Query: 281 NVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAF 460
++W+DH SMS+C DGLID V ST IT+SN++FT H+ VML G S+D D VMQ TVA
Sbjct: 726 HIWVDHCSMSNCEDGLIDAVKASTYITISNNYFTHHNKVMLLGHSDDHHHDKVMQATVAL 547
Query: 461 NHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEV 640
NHFG GLVQRMPRCR+G+FHV NNDYT W MYAIGG+ NPTI+SQGNRF+A +P KEV
Sbjct: 546 NHFGEGLVQRMPRCRFGYFHVFNNDYTEWGMYAIGGSSNPTILSQGNRFMASGNPMVKEV 367
Query: 641 TKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRF 820
TKR+ + ++K+W W S+ D ++NGA+F SG Q Y K V ++TR
Sbjct: 366 TKRQNSTESEWKKWNWISEDDALLNGAYFTPSGSQVLSTYTAAYSARPKSSAVVEEITRN 187
Query: 821 AGPLKCIVGQPC* 859
AG L C G C*
Sbjct: 186 AGVLSCKKGTRC* 148
Score = 180 bits (387), Expect = 2e-044
Identities = 87/163 (53%), Positives = 98/163 (60%)
Frame = -1 / +2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF S D H SL + LVTSL +G AM LP L MVGF LPPM
Sbjct: 269 PDGVKYAPFSSASSSDIQFHFFHSLSVEFCLLVTSLTMGFPDAMNLLP*LSMVGFELPPM 448
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ V*SL TWK P R GIRCT P PKWL+ATV CIT S S L PN+IT W V
Sbjct: 449 AYIPHSV*SLLNTWKYPNRHLGIRCTRPSPKWLSATVACITLS*WWSSL*PNNITLLW*V 628
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSP 250
K LL+ V+ VD T S+ PS QLD++ WS H L E PSP
Sbjct: 629 K*LLEMVI*VDALTASMRPSSQLDIEQWSTHMCLAVEIEIPSP 757
>gb|CF399982.1|CF399982 RTWW1_2_B02.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_2_B02_A015 5', mRNA sequence
Length = 585
Score = 215 bits (464), Expect(2) = 3e-068
Identities = 84/138 (60%), Positives = 100/138 (72%)
Frame = +2 / +1
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K M+RDS HYG RT ++W+DHVS+S+C+DGLID + GSTAI
Sbjct: 172 DCKPAGNAMVRDSPTHYGWRTICDGDGISIFGGSHIWVDHVSLSNCADGLIDAIMGSTAI 351
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+HFT H+ VML G S+ D MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 352 TISNNHFTHHNEVMLLGHSDSYTPDVNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 531
Query: 539 THWIMYAIGGNMNPTIIS 592
THW MYAIGG+ NPTI S
Sbjct: 532 THWEMYAIGGSANPTINS 585
Score = 147 bits (316), Expect(2) = 4e-043
Identities = 72/138 (52%), Positives = 84/138 (60%)
Frame = -1 / -2
Query: 591 LMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLL 412
L++VGF LPP+AY+ Q V*SLFTTWK P GI CT P PK LNA VTC+ S L
Sbjct: 584 LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGILCTRPSPK*LNAIVTCMLTSGV*LSL 405
Query: 411 APNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRS 232
PN+IT W VKWL + V+AVDP S+ PS QLD +TWS L E PSPS V
Sbjct: 404 *PNNITSLW*VKWLFEMVIAVDPMMASMRPSAQLDKETWSTQMWLPPKMEIPSPSQIVLH 225
Query: 231 P*CRFESRIMPPECALES 178
P*C ES + L+S
Sbjct: 224 P*CVGESLTIAFPAGLQS 171
Score = 64.8 bits (135), Expect(2) = 3e-068
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +2 / +1
Query: 11 PLWIVFARDMVIELRQELIVNHNKTIDGRGAQVHI 115
PLWIVF RDMVI L++ELI+N KTIDGRG VHI
Sbjct: 1 PLWIVFERDMVITLKEELIMNSFKTIDGRGVNVHI 105
Score = 48.3 bits (99), Expect(2) = 4e-043
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -3 / -1
Query: 115 DVHLRAPPVDRLVVVHDQLLPQLDHHVAREHDPQR 11
+V + AP V+ L VHDQLL Q DHHV+ E DP+R
Sbjct: 105 NVDIDAPSVNCLETVHDQLLLQCDHHVSLEDDPER 1
>gb|CO361957.1|CO361957 NDL2_8_E07.b1_A029 Needles control 2 Pinus taeda cDNA clone
NDL2_8_E07_A029 3', mRNA sequence
Length = 763
Score = 257 bits (555), Expect = 1e-067
Identities = 100/174 (57%), Positives = 127/174 (72%)
Frame = +2 / +3
Query: 338 VNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFF 517
+ GSTAIT+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+F
Sbjct: 6 IRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYF 185
Query: 518 HVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQ 697
HVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+
Sbjct: 186 HVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSE 365
Query: 698 GDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
GD+M+NGAFF +SG + Y + + A+ V LT +AG L+C G C*
Sbjct: 366 GDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 527
Score = 158 bits (339), Expect = 8e-038
Identities = 84/168 (50%), Positives = 97/168 (57%)
Frame = -1 / -1
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 514 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 335
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 334 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 155
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDP 343
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP
Sbjct: 154 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDP 11
>gb|CX713137.1|CX713137 RTPQ1_7_F01.b1_A032 Roots treated with paraquat Pinus taeda cDNA
clone RTPQ1_7_F01_A032 3', mRNA sequence
Length = 752
Score = 257 bits (555), Expect = 1e-067
Identities = 100/174 (57%), Positives = 127/174 (72%)
Frame = +2 / +3
Query: 338 VNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFF 517
+ GSTAIT+SN++ + HD VML G S+D QD MQVT+AFNHFG GLVQRMPRCR+G+F
Sbjct: 6 IRGSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEGLVQRMPRCRHGYF 185
Query: 518 HVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQ 697
HVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+S+
Sbjct: 186 HVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTKHEDAPENAWRQWNWRSE 365
Query: 698 GDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
GD+M+NGAFF +SG + Y + + A+ V LT +AG L+C G C*
Sbjct: 366 GDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAGVLQCRAGSRC* 527
Score = 158 bits (339), Expect = 8e-038
Identities = 84/168 (50%), Positives = 97/168 (57%)
Frame = -1 / -2
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 514 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 335
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 334 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 155
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDP 343
CTSP PKWL A VTC+ S S L P SIT S LL+ V+AVDP
Sbjct: 154 CTSPSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDP 11
>gb|DR017596.1|DR017596 STRS1_17_G04.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_17_G04_A034 3', mRNA sequence
Length = 761
Score = 256 bits (554), Expect = 2e-067
Identities = 106/189 (56%), Positives = 129/189 (68%)
Frame = +2 / +1
Query: 293 DHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFG 472
DH SMS+C DGLID V ST IT+SN++FT H+ VML G S+D D VMQ TVA NHFG
Sbjct: 1 DHCSMSNCEDGLIDAVKASTYITISNNYFTHHNKVMLLGHSDDHHHDKVMQATVALNHFG 180
Query: 473 RGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKRE 652
GLVQRMPRCR+G+FHV NNDYT W MYAIGG+ NPTI+SQGNRF+A +P KEVTKR+
Sbjct: 181 EGLVQRMPRCRFGYFHVFNNDYTEWGMYAIGGSSNPTILSQGNRFMASGNPMVKEVTKRQ 360
Query: 653 YTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPL 832
+ ++K+W W S+ D ++NGA+F SG Q Y K V ++TR AG L
Sbjct: 361 NSAESEWKKWNWISEDDALLNGAYFTPSGSQVLSTYTAAYSARPKSSAVVEEITRNAGVL 540
Query: 833 KCIVGQPC* 859
C G C*
Sbjct: 541 SCKKGTRC* 567
Score = 168 bits (361), Expect = 8e-041
Identities = 80/148 (54%), Positives = 91/148 (61%)
Frame = -1 / -1
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF S D H SL + LVTSL +G AM LP L MVGF LPPM
Sbjct: 446 PDGVKYAPFSSASSSDIQFHFFHSLSAEFCLLVTSLTMGFPDAMNLLP*LSMVGFELPPM 267
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ V*SL TWK P R GIRCT P PKWL+ATV CIT S S L PN+IT W V
Sbjct: 266 AYIPHSV*SLLNTWKYPNRHLGIRCTRPSPKWLSATVACITLS*WWSSL*PNNITLLW*V 87
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTW 295
K LL+ V+ VD T S+ PS QLD++ W
Sbjct: 86 K*LLEMVI*VDALTASMRPSSQLDIEQW 3
>gb|CF669425.1|CF669425 RTCNT1_43_G02.b1_A029 Root control Pinus taeda cDNA clone
RTCNT1_43_G02_A029 3', mRNA sequence
Length = 655
Score = 195 bits (420), Expect(3) = 2e-067
Identities = 79/134 (58%), Positives = 91/134 (67%)
Frame = +2 / -2
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D K +RDS HYG RTR N+WIDH S+S+C+DGLID V GSTAI
Sbjct: 501 DCKPAGNATVRDSPGHYGWRTRSDGDGVSIVGGSNIWIDHCSLSNCADGLIDAVLGSTAI 322
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+ T HD VML G S++ QD MQVTVAFN FG GLVQR+PRCR+G+FHVVNNDY
Sbjct: 321 TISNNFMTHHDKVMLLGHSDEYMQDVNMQVTVAFNRFGEGLVQRIPRCRHGYFHVVNNDY 142
Query: 539 THWIMYAIGGNMNP 580
THW MYAI P
Sbjct: 141 THWEMYAIWWKCEP 100
Score = 162 bits (348), Expect(3) = 1e-049
Identities = 75/138 (54%), Positives = 89/138 (64%)
Frame = -1 / +2
Query: 585 MVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAP 406
++G +AY+ QCV*SLFTTWK P R G+RCTSP PK L ATVTC+ SC S L P
Sbjct: 95 LLGSHFHQIAYISQCV*SLFTTWK*PCRHLGMRCTSPSPKRLKATVTCMLTSCIYSSL*P 274
Query: 405 NSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLLDDSTETPSPSLRVRSP* 226
S+T SW V L + V+AVDP T S+SPS Q D + WSI LL + ETPSPSL V P*
Sbjct: 275 RSMTLSWCVIKLFEIVIAVDPRTASMSPSAQFDKEQWSIQILLPPTMETPSPSLLVLHP* 454
Query: 225 CRFESRIMPPECALESWM 172
C ES + L+SWM
Sbjct: 455 CPGESLTVAFPAGLQSWM 508
Score = 50.6 bits (104), Expect(3) = 2e-067
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2 / -2
Query: 32 RDMVIELRQELIVNHNKTIDGRGAQVHI 115
RDMVI+L++EL +N KTIDGRGA VHI
Sbjct: 651 RDMVIQLKEELFMNSYKTIDGRGANVHI 568
Score = 50.1 bits (103), Expect(3) = 2e-067
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = +2 / -3
Query: 563 GGNMNPTIISQGNRFIAPDDPNAKEVTKRE 652
GG+ NPTI SQGNRF AP +P +KEVTK E
Sbjct: 116 GGSANPTINSQGNRFHAPVNPFSKEVTKHE 27
Score = 47.3 bits (97), Expect(3) = 1e-049
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -1 / +1
Query: 669 SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPP 562
+L S VTSL G +GA RLPWL++VGF LPP
Sbjct: 10 TLSSASSCFVTSLEKGLTGAWNRLPWLLIVGFALPP 117
Score = 26.7 bits (52), Expect(3) = 1e-049
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -1 / +2
Query: 108 TCAPRPSIVLLWFTISSCRSSITMS 34
T AP PSIVL F SS S +TMS
Sbjct: 575 TFAPLPSIVL*LFMKSSSLSWMTMS 649
>gb|BM367381.1|BM367381 NXLV_048_E03_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA
clone NXLV_048_E03 5' similar to Arabidopsis thaliana
sequence At4g24780 pectate lyase like protein see
http://mips.gsf.de/proj/thal/db/index.html, mRNA
sequence
Length = 507
Score = 252 bits (544), Expect = 4e-066
Identities = 96/160 (60%), Positives = 121/160 (75%)
Frame = +2 / +3
Query: 281 NVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAF 460
N+W+DH S+S+C++GLID + GSTAIT+SN+ T HD VML G S++ QD MQVTVAF
Sbjct: 27 NIWVDHCSLSNCANGLIDAILGSTAITISNNFMTHHDKVMLLGHSDEYVQDVNMQVTVAF 206
Query: 461 NHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEV 640
NHFG GLVQR+PRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF+ P + +KEV
Sbjct: 207 NHFGEGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLXPVNRFSKEV 386
Query: 641 TKREYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKY 760
T E P +++W W+S G +M+NG FF +SG Y
Sbjct: 387 TXHEDAPEXXWRQWNWRSXGXLMLNGXFFTQSGAXASSSY 506
Score = 175 bits (377), Expect = 5e-043
Identities = 80/154 (51%), Positives = 94/154 (61%)
Frame = -1 / -3
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K PF + P D H L G S VTSL +G RLPWL++VG LPP+
Sbjct: 484 PD*VKNXPFNIRXPXDLQFHCRHXLSGASSCXVTSLEKRLTGXRNRLPWLLIVGLALPPI 305
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R G+RCTSP PKWL ATVTC+ SC S L P S+T SW V
Sbjct: 304 AYISQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCV 125
Query: 378 KWLLDTVMAVDPFTTSISPSEQLDMDTWSIHTLL 277
L + V+AVDP S+SP Q D + S LL
Sbjct: 124 IKLFEIVIAVDPRIASMSPFAQFDKEQ*STQILL 23
>gb|DR097388.1|DR097388 STRR1_34_H05.b1_A033 Stem Response Resistant Pinus taeda cDNA clone
STRR1_34_H05_A033 3', mRNA sequence
Length = 830
Score = 249 bits (539), Expect = 2e-065
Identities = 102/177 (57%), Positives = 125/177 (70%)
Frame = +2 / +2
Query: 329 IDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRY 508
ID + GSTAIT+SN+HFT H+ VML G S+ D MQ+T+A+NHFG GLVQRMPRCR+
Sbjct: 2 IDAIMGSTAITISNNHFTHHNEVMLLGHSDSYTPDVNMQITIAYNHFGEGLVQRMPRCRH 181
Query: 509 GFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVW 688
G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF APD+ AKEVTKR +K+W W
Sbjct: 182 GYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFSAPDNSLAKEVTKRINKDADQWKDWNW 361
Query: 689 KSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
+S+GD+M+NGA+F SG Y + + A+ VG LT+ AG L C G C*
Sbjct: 362 RSKGDMMLNGAYFTPSGAGASSAYLKASSLEARPSTLVGPLTQNAGVLSCKKGTRC* 532
Score = 146 bits (313), Expect = 3e-034
Identities = 79/173 (45%), Positives = 93/173 (53%)
Frame = -1 / -3
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P + S PA VS PT LA Y PD +K AP + SP D S
Sbjct: 519 PFLQESTPAFWVSGPTSVEGLASRLDAFKYAEDAPAPDGVKYAPLSIISPFDLQFQSFH* 340
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
++ R VTSLA SGA P L++VGF LPP+AY+ Q V*SLFTTWK P GI
Sbjct: 339 SASLFIRFVTSLAKLLSGAENLFP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGIL 160
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSI 328
CT P PKWL A V C+ S L PN+IT W VKWL + V+AVDP S+
Sbjct: 159 CTRPSPKWLYAIVICMLTSGV*LSL*PNNITSLW*VKWLFEMVIAVDPMMASM 1
>gb|CF400507.1|CF400507 RTWW1_5_D03.g1_A015 Well-watered loblolly pine roots WW1 Pinus
taeda cDNA clone RTWW1_5_D03_A015 5', mRNA sequence
Length = 738
Score = 249 bits (538), Expect = 3e-065
Identities = 103/176 (58%), Positives = 124/176 (70%)
Frame = +2 / +1
Query: 332 DVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYG 511
D + GSTAIT+SN+ T HD VML G S++ QD MQVTVAFNHFG GLVQR+PRCR+G
Sbjct: 1 DAILGSTAITISNNFMTHHDKVMLLGHSDEYVQDVNMQVTVAFNHFGEGLVQRIPRCRHG 180
Query: 512 FFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWK 691
+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEVTK E P +++W W+
Sbjct: 181 YFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPVNRFSKEVTKHEDAPESAWRQWNWR 360
Query: 692 SQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
S GD+M+NGAFF +SG Y + + AK VG LT AG L C G C*
Sbjct: 361 SDGDLMLNGAFFTQSGAAASSSYAKASSLAAKPSSLVGSLTGNAGVLACRKGTRC* 528
Score = 170 bits (366), Expect = 2e-041
Identities = 75/132 (56%), Positives = 88/132 (66%)
Frame = -1 / -2
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
PD +K APF + SP D H +L G S VTSL +GA RLPWL++VG LPP+
Sbjct: 407 PD*VKNAPFNIRSPSDLQFHCRHALSGASSCFVTSLEKRLTGARNRLPWLLIVGLALPPI 228
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ QCV*SLFTTWK P R G+RCTSP PKWL ATVTC+ SC S L P S+T SW V
Sbjct: 227 AYISQCV*SLFTTWK*PCRHLGMRCTSPSPKWLKATVTCMLTSCTYSSLWPRSMTLSWCV 48
Query: 378 KWLLDTVMAVDP 343
L + V+AVDP
Sbjct: 47 IKLFEIVIAVDP 12
>gb|CF473597.1|CF473597 RTWW2_3_C02.g1_A021 Well-watered loblolly pine roots WW2 Pinus
taeda cDNA clone RTWW2_3_C02_A021 5', mRNA sequence
Length = 682
Score = 246 bits (532), Expect = 2e-064
Identities = 102/178 (57%), Positives = 125/178 (70%)
Frame = +2 / +3
Query: 326 LIDVVNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCR 505
LID + G TAIT+SN+HFT H+ VML G S+ D MQVT+AFNHFG GLVQRMPRCR
Sbjct: 3 LIDAIMGFTAITISNNHFTHHNEVMLLGHSDSYTPDVNMQVTIAFNHFGEGLVQRMPRCR 182
Query: 506 YGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWV 685
+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF AP +P AKEVTKRE ++++W
Sbjct: 183 HGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFSAPANPFAKEVTKREDNNVNEWRQWN 362
Query: 686 WKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
W+S+GD+++NGA+F SG Y + + A+ V LT AG L C G C*
Sbjct: 363 WRSEGDMLLNGAYFVPSGAGAASAYAKASSLGARPSSLVQPLTATAGVLTCRRGVRC* 536
Score = 152 bits (326), Expect = 5e-036
Identities = 82/173 (47%), Positives = 98/173 (56%)
Frame = -1 / -1
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P + +S PA VS T LA +Y + PD K APF SP D H L S
Sbjct: 523 PLLQVSTPAVAVSGWTRLEGLAPRLDAFAYAEAAPAPDGTKYAPFSSISPSDLQFHCLHS 344
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
+ S VTSLA G +GA LP L++VGF LPP+AY+ Q V*SLFTTWK P GI
Sbjct: 343 FTLLSSLFVTSLAKGFAGAENLLP*LLIVGFALPPIAYISQ*V*SLFTTWKYPCLHLGIL 164
Query: 486 CTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSI 328
CT P PK LNA VTC+ S L PN+IT W VKWL + V+AV+P S+
Sbjct: 163 CTRPSPK*LNAIVTCMLTSGV*LSL*PNNITSLW*VKWLFEMVIAVNPMMASM 5
>gb|DR019720.1|DR019720 STRS1_32_A09.b1_A034 Shoot tip pitch canker susceptible Pinus taeda
cDNA clone STRS1_32_A09_A034 3', mRNA sequence
Length = 741
Score = 218 bits (470), Expect(2) = 3e-064
Identities = 86/142 (60%), Positives = 103/142 (72%)
Frame = +2 / -2
Query: 224 HYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAITVSNSHFTDHDHVML 403
HYG RT +WID + SSC+ GLID + GSTAIT+SN++FT HD VML
Sbjct: 716 HYGWRTLADGDGISIFGGRYIWIDRCAFSSCNHGLIDAIMGSTAITISNNYFTQHDMVML 537
Query: 404 FGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPT 583
G S+ QD +MQVT+A+N+FG GLVQRMPRCR+G+FHVVNN Y HW MYAIGG+ NPT
Sbjct: 536 LGHSDSYVQDVIMQVTIAYNYFGEGLVQRMPRCRHGYFHVVNNQYVHWEMYAIGGSANPT 357
Query: 584 IISQGNRFIAPDDPNAKEVTKR 649
I S+GN FIA DD N K+VTKR
Sbjct: 356 INSEGNIFIASDDANVKQVTKR 291
Score = 137 bits (293), Expect = 2e-031
Identities = 75/143 (52%), Positives = 82/143 (57%)
Frame = -1 / +1
Query: 651 SRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRCTSPR 472
+RLVT L L SS AM LP L++VG LPP+AY+ QC LFTT K P R GI TSP
Sbjct: 289 TRLVTCLTLASSDAMNMLPSLLIVGLALPPIAYISQCTYWLFTT*KYPCRHLGILWTSPS 468
Query: 471 PKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDMDTWS 292
PK L A VTCI SC L P S+T S VK L D VMAVDP SI P QL+ S
Sbjct: 469 PK*L*AIVTCIITSCT*LSL*PRSMTMSC*VK*LFDMVMAVDPMIASIRPWLQLEKAQRS 648
Query: 291 IHTLLDDSTETPSPSLRVRSP*C 223
I E PSPS V P*C
Sbjct: 649 IQM*RPPKIEMPSPSANVLQP*C 717
Score = 48.7 bits (100), Expect(2) = 3e-064
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2 / -2
Query: 671 YKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLK 835
+++W W+S GD M+NGA+F SG + Y + AK +V LT AG L+
Sbjct: 251 WQDWNWRSVGDQMLNGAYFVPSGSMADDSYALASSLGAKPAVFVETLTEEAGVLQ 87
>gb|BX250981.1|BX250981 BX250981 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone PP043G03 similar to PECTATE LYASE PRECURSOR,
mRNA sequence
Length = 678
Score = 245 bits (529), Expect = 5e-064
Identities = 101/174 (58%), Positives = 122/174 (70%)
Frame = +2 / +3
Query: 338 VNGSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFF 517
+ STAIT+SN+HFT HD VML G ++ D MQVT+AFNHFG GLVQRMPRCR+G+F
Sbjct: 3 IMASTAITISNNHFTHHDKVMLLGHNDGYAPDKNMQVTIAFNHFGEGLVQRMPRCRHGYF 182
Query: 518 HVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYKEWVWKSQ 697
HVVNNDYTHW MYAIGG+ NPTI S+GNR++AP D AKE+TKR TP+ +K W W+SQ
Sbjct: 183 HVVNNDYTHWEMYAIGGSANPTINSEGNRYLAPVDRFAKEITKRVDTPHGRWKNWNWRSQ 362
Query: 698 GDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAGPLKCIVGQPC* 859
GD+ +NGAFF SG Y + + A+ V LT AGPL C G C*
Sbjct: 363 GDLFLNGAFFINSGAGAASSYAKASSLGARPASRVKFLTGNAGPLACRTGSRC* 524
Score = 125 bits (267), Expect = 7e-028
Identities = 63/131 (48%), Positives = 78/131 (59%)
Frame = -1 / -3
Query: 738 PDSLKKAPFIMTSPCDFHTHSL*SLYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPM 559
P+ +K AP SP D +GV +R V SLA S+GA P L++VG LPP+
Sbjct: 403 PELMKNAPLRNKSP*DLQFQFFHLPWGVSTRFVISLAKRSTGARYLFPSLLIVGLALPPI 224
Query: 558 AYMIQCV*SLFTTWKKP*RQRGIRCTSPRPKWLNATVTCITASCGLSLLAPNSITWSWSV 379
AY+ Q V*SL TT K P R G+RCT P PKWLNA VTC+ S L P S+T SW V
Sbjct: 223 AYISQ*V*SLLTT*KYPWRHLGMRCTRPSPKWLNAIVTCMFLSGA*PSLCPRSMTLSWWV 44
Query: 378 KWLLDTVMAVD 346
K L + V+AV+
Sbjct: 43 K*LFEMVIAVE 11
>gb|CR354745.1|CR354745 CR354745 Pinus pinaster differenciating xylem adult Pinus pinaster
cDNA clone 125H08, mRNA sequence
Length = 582
Score = 242 bits (522), Expect = 5e-063
Identities = 96/166 (57%), Positives = 117/166 (70%)
Frame = +2 / +3
Query: 179 DSKAHSGGMIRDSKRHYGLRTRXXXXXXXXXXXXNVWIDHVSMSSCSDGLIDVVNGSTAI 358
D + M+R S HYG RT +VW+DH S+S C+DGLID + STAI
Sbjct: 81 DCRPAGNAMVRSSPTHYGWRTMCDGDGVSIFGGSHVWVDHCSLSKCADGLIDAIMASTAI 260
Query: 359 TVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRGLVQRMPRCRYGFFHVVNNDY 538
T+SN+HFT HD VML G ++ D MQVT+AFNHFG GLVQRMPRCR+G+FHVVNNDY
Sbjct: 261 TISNNHFTHHDKVMLLGHNDGYAPDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDY 440
Query: 539 THWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTKREYTPYKDYK 676
THW MYAIGG+ NPTI S+GNR++AP D AKE+TKR TP+ +K
Sbjct: 441 THWEMYAIGGSANPTINSEGNRYLAPVDRFAKEITKRVDTPHGRWK 578
Score = 158 bits (340), Expect = 6e-038
Identities = 80/164 (48%), Positives = 98/164 (59%)
Frame = -1 / -3
Query: 663 YGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIRC 484
+GV +R V SLA S+GA P L++VG LPP+AY+ Q V*SL TT K P R G+RC
Sbjct: 565 WGVSTRFVISLAKRSTGARYLFPSLLIVGLALPPIAYISQ*V*SLLTT*KYPWRHLGMRC 386
Query: 483 TSPRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDPFTTSISPSEQLDM 304
T P PKWLNA VTC+ S L P S+T SW VK L + V+AV+ S+SPS L+
Sbjct: 385 TRPSPKWLNAIVTCMFLSGA*PSLCPRSMTLSWWVK*LFEMVIAVEAMIASMSPSAHLES 206
Query: 303 DTWSIHTLLDDSTETPSPSLRVRSP*CRFESRIMPPECALESWM 172
+ S T L ETPSPS V P*C E R M L+SW+
Sbjct: 205 EQ*STQTWLPPKIETPSPSHIVLHP*CVGELRTMAFPAGLQSWI 74
>gb|CX647323.1|CX647323 COLD1_15_G01.b1_A029 Root cold Pinus taeda cDNA clone
COLD1_15_G01_A029 3', mRNA sequence
Length = 721
Score = 188 bits (405), Expect(2) = 6e-063
Identities = 73/131 (55%), Positives = 93/131 (70%)
Frame = +2 / +1
Query: 467 FGRGLVQRMPRCRYGFFHVVNNDYTHWIMYAIGGNMNPTIISQGNRFIAPDDPNAKEVTK 646
F GLVQRMPRCR+G+FHVVNNDYTHW MYAIGG+ NPTI SQGNRF+AP + +KEVTK
Sbjct: 127 FWGGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPSNAFSKEVTK 306
Query: 647 REYTPYKDYKEWVWKSQGDVMMNGAFFNESGGQNERKYDRFDFIPAKHGRYVGQLTRFAG 826
E P +++W W+S+GD+M+NGAFF +SG + Y + + A+ V LT +AG
Sbjct: 307 HEDAPENAWRQWNWRSEGDLMLNGAFFTQSGAASSSSYAKASSLAARPSSLVSSLTTYAG 486
Query: 827 PLKCIVGQPC* 859
L+C G C*
Sbjct: 487 VLQCRAGSRC* 519
Score = 118 bits (252), Expect(2) = 1e-033
Identities = 61/124 (49%), Positives = 71/124 (57%)
Frame = -1 / -3
Query: 846 PTMHLSGPAKRVS*PT*RPCLAGMKSNLSYLRSFWPPDSLKKAPFIMTSPCDFHTHSL*S 667
P +H PA V T LA L+ L PD +K APF + SP D H L +
Sbjct: 506 PALHCRTPAYVVREETRDEGLAARLEALA*LDDEAAPD*VKNAPFNIRSPSDLQFHCLHA 327
Query: 666 LYGVYSRLVTSLALGSSGAMKRLPWLMMVGFMLPPMAYMIQCV*SLFTTWKKP*RQRGIR 487
G S LVTSL GA RLPWL++VGF LPP+AY+ Q V*SLFTTWK P R G+R
Sbjct: 326 FSGASSCLVTSLENALLGARNRLPWLLIVGFALPPIAYISQ*V*SLFTTWKYPCRHLGMR 147
Query: 486 CTSP 475
CTSP
Sbjct: 146 CTSP 135
Score = 73.9 bits (155), Expect(2) = 6e-063
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +2 / +2
Query: 344 GSTAITVSNSHFTDHDHVMLFGASNDSPQDAVMQVTVAFNHFGRG 478
GSTAIT+SN++ + HD VML G S+D QD MQVT+AFNHFG G
Sbjct: 5 GSTAITISNNYMSQHDKVMLLGHSDDYTQDVNMQVTIAFNHFGEG 139
Score = 46.0 bits (94), Expect(2) = 1e-033
Identities = 24/45 (53%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 477 PRPKWLNATVTCITASCGLSLLAPNSITWSWSVKWLLDTVMAVDP 343
P PKWL A VTC+ S S L P SIT S LL+ V+AVDP
Sbjct: 138 PSPKWLKAIVTCMLTS*V*SSLWPRSITLSCCDI*LLEMVIAVDP 4
Database: Pinus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:45 PM
Number of letters in database: 217,277,237
Number of sequences in database: 355,925
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 429,396,433
Number of Sequences: 355925
Number of extensions: 5694165
Number of successful extensions: 35206
Number of sequences better than 1.0e-020: 163
length of database: 72,425,745
effective HSP length: 53
effective length of database: 53,561,720
effective search space used: 17728929320
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)