TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCT19a08.yg.2.1
(645 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA... 243 1e-062
gb|AACV01000298.1| Oryza sativa (japonica cultivar-group) c... 243 1e-062
dbj|AP002524.2| Oryza sativa (japonica cultivar-group) geno... 243 1e-062
dbj|AP003118.2| Oryza sativa (japonica cultivar-group) geno... 243 1e-062
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 243 1e-062
ref|NM_189545.1| Oryza sativa (japonica cultivar-group), p... 243 1e-062
ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA 243 1e-062
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 243 1e-062
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 243 1e-062
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 243 1e-062
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 243 1e-062
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 197 7e-062
ref|NT_107223.1| Oryza sativa (japonica cultivar-group) 197 7e-062
gb|AC135425.3| Oryza sativa (japonica cultivar-group) chrom... 197 8e-062
gb|AC130610.3| Oryza sativa (japonica cultivar-group) chrom... 197 8e-062
gb|AACV01011020.1| Oryza sativa (japonica cultivar-group) c... 197 8e-062
ref|XM_476068.1| Oryza sativa (japonica cultivar-group), p... 197 2e-054
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 197 9e-049
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 197 9e-049
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 133 2e-037
gb|CH401220.1| Oryza sativa (japonica cultivar-group) chrom... 133 2e-037
dbj|AP004307.2| Oryza sativa (japonica cultivar-group) geno... 133 2e-037
gb|AACV01015282.1| Oryza sativa (japonica cultivar-group) c... 133 2e-037
ref|NT_107187.1| Oryza sativa (japonica cultivar-group) 130 3e-037
gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 ... 130 3e-037
dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA... 130 3e-037
gb|CB657603.1|CB657603 OSJNEc13B13.r OSJNEc Oryza sativa (j... 130 3e-037
gb|AU032129.1|AU032129 AU032129 Rice root Oryza sativa (jap... 125 6e-035
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 118 3e-034
ref|NT_079918.2| Oryza sativa (japonica cultivar-group) 118 3e-034
gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 ... 118 3e-034
gb|AACV01007426.1| Oryza sativa (japonica cultivar-group) c... 118 3e-034
dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA... 118 3e-034
dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA... 118 3e-034
dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA... 118 3e-034
ref|XM_468996.1| Oryza sativa (japonica cultivar-group), mRNA 118 3e-034
dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA... 118 3e-034
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 86 1e-030
gb|AACV01008082.1| Oryza sativa (japonica cultivar-group) c... 86 1e-030
gb|AU092661.1|AU092661 AU092661 Rice callus Oryza sativa (j... 108 7e-030
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 133 2e-029
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 133 2e-029
dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA... 133 3e-029
dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA... 133 3e-029
dbj|AP003333.4| Oryza sativa (japonica cultivar-group) geno... 133 3e-029
dbj|AP003253.3| Oryza sativa (japonica cultivar-group) geno... 133 3e-029
gb|AACV01001725.1| Oryza sativa (japonica cultivar-group) c... 133 3e-029
ref|NM_192605.1| Oryza sativa (japonica cultivar-group), p... 133 3e-029
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 133 3e-029
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 133 3e-029
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 130 2e-028
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 130 2e-028
dbj|AK105531.1| Oryza sativa (japonica cultivar-group) cDNA... 112 3e-028
ref|NT_107234.1| Oryza sativa (japonica cultivar-group) 112 4e-028
dbj|AP003761.3| Oryza sativa (japonica cultivar-group) geno... 112 4e-028
gb|AACV01014884.1| Oryza sativa (japonica cultivar-group) c... 112 4e-028
ref|NT_107175.1| Oryza sativa (japonica cultivar-group) 110 3e-027
dbj|AP005647.3| Oryza sativa (japonica cultivar-group) geno... 110 3e-027
dbj|AP004061.1| Oryza sativa (japonica cultivar-group) chro... 110 3e-027
gb|AACV01003301.1| Oryza sativa (japonica cultivar-group) c... 110 3e-027
ref|XM_464070.1| Oryza sativa (japonica cultivar-group), mRNA 110 3e-027
dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA... 124 8e-027
emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC O... 120 2e-025
ref|NT_107150.1| Oryza sativa (japonica cultivar-group) 120 2e-025
gb|AACV01025171.1| Oryza sativa (japonica cultivar-group) c... 120 2e-025
ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA 120 2e-025
gb|CH401281.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-025
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-025
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 120 2e-025
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 120 2e-025
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 118 7e-025
dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA... 113 2e-023
dbj|AP003312.3| Oryza sativa (japonica cultivar-group) geno... 113 2e-023
gb|AACV01001066.1| Oryza sativa (japonica cultivar-group) c... 113 2e-023
ref|NM_193983.1| Oryza sativa (japonica cultivar-group), p... 113 2e-023
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 113 2e-023
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 113 2e-023
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 112 4e-023
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 112 4e-023
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 112 4e-023
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 77 1e-022
dbj|AP004097.3| Oryza sativa (japonica cultivar-group) geno... 77 1e-022
gb|AACV01004906.1| Oryza sativa (japonica cultivar-group) c... 77 1e-022
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 110 1e-022
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 110 1e-022
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 110 1e-022
dbj|AK119668.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
ref|XM_507508.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
dbj|AK104632.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
ref|XM_507497.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
dbj|AK064829.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
ref|XM_507498.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
dbj|AK103939.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104307.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104310.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104383.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104563.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104569.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104662.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK106204.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK109334.2| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
ref|XM_506867.2| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507499.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507500.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507501.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507502.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507503.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507504.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507505.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507506.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
ref|XM_507507.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
dbj|AK106124.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
ref|XM_507509.1| PREDICTED Oryza sativa (japonica cultivar-... 77 1e-022
dbj|AK104284.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
ref|XM_466744.1| Oryza sativa (japonica cultivar-group), mRNA 77 1e-022
dbj|AK105020.2| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK061687.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK059998.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104607.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104643.1| Oryza sativa (japonica cultivar-group) cDNA... 77 1e-022
dbj|AK104455.1| Oryza sativa (japonica cultivar-group) cDNA... 77 9e-022
ref|NT_079864.2| Oryza sativa (japonica cultivar-group) 80 5e-021
emb|AL606604.4| Oryza sativa genomic DNA, chromosome 4, BAC... 80 5e-021
emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromoso... 80 5e-021
dbj|AK066703.1| Oryza sativa (japonica cultivar-group) cDNA... 80 6e-021
dbj|AK104903.1| Oryza sativa (japonica cultivar-group) cDNA... 80 6e-021
ref|XM_473089.1| Oryza sativa (japonica cultivar-group), p... 80 6e-021
gb|CZ593837.1|CZ593837 UCDRDs141_5.1 UCD RDs Rice Insertion... 80 6e-021
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full
insert sequence
Length = 2207
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 841 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 1020
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 1021 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 1200
Query: 371 CA 376
CA
Sbjct: 1201 CA 1206
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -1
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 1205 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 1026
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 1025 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 846
Query: 15 LMGWI 1
LM I
Sbjct: 845 LMSKI 831
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / -3
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 1200 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 1021
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 1020 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 868
>gb|AACV01000298.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg000298, whole
genome shotgun sequence
Length = 12784
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 6369 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 6190
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 6189 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 6010
Query: 371 CA 376
CA
Sbjct: 6009 CA 6004
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / +2
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 6005 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 6184
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 6185 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 6364
Query: 15 LMGWI 1
LM I
Sbjct: 6365 LMSKI 6379
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / +1
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 6010 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 6189
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 6190 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 6342
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0406H10
Length = 156419
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 126544 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 126365
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 126364 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 126185
Query: 371 CA 376
CA
Sbjct: 126184 CA 126179
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / +3
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 126180 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 126359
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 126360 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 126539
Query: 15 LMGWI 1
LM I
Sbjct: 126540 LMSKI 126554
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / +2
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 126185 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 126364
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 126365 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 126517
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OJ1174_D05
Length = 128525
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 17540 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 17361
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 17360 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 17181
Query: 371 CA 376
CA
Sbjct: 17180 CA 17175
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / +1
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 17176 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 17355
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 17356 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 17535
Query: 15 LMGWI 1
LM I
Sbjct: 17536 LMSKI 17550
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / +3
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 17181 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 17360
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 17361 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 17513
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 4177375 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 4177196
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 4177195 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 4177016
Query: 371 CA 376
CA
Sbjct: 4177015 CA 4177010
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / +3
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 4177011 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 4177190
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 4177191 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 4177370
Query: 15 LMGWI 1
LM I
Sbjct: 4177371 LMSKI 4177385
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / +2
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 4177016 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 4177195
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 4177196 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 4177348
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 23360929 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 23361108
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 23361109 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 23361210
Score = 113 bits (242), Expect = 2e-023
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+NN L C+P E GLL TVFDVS N L G +P + G+ KVEQLD++HN +G VP
Sbjct: 14419464 LNNSLTGCLPLESGLLANATVFDVSHNLLTGAIPATMGGLAKVEQLDLSHNTFTGVVPGD 14419285
Query: 191 ICALPRLKNLTISYNFFTGEPPSCA 265
+C LP L NL++SYNF GE C+
Sbjct: 14419284 VCGLPALTNLSVSYNFIAGEDAQCS 14419210
>ref|NM_189545.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1740
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 739 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 918
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 919 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 1098
Query: 371 CA 376
CA
Sbjct: 1099 CA 1104
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -2
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 1103 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 924
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 923 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 744
Query: 15 LMGWI 1
LM I
Sbjct: 743 LMSKI 729
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / -1
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 1098 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 919
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 918 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 766
>ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2207
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 841 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 1020
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 1021 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 1200
Query: 371 CA 376
CA
Sbjct: 1201 CA 1206
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / -1
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 1205 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 1026
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 1025 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 846
Query: 15 LMGWI 1
LM I
Sbjct: 845 LMSKI 831
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / -3
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 1200 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 1021
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 1020 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 868
>ref|NT_036312.3| Oryza sativa (japonica cultivar-group)
Length = 10050053
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 4177215 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 4177036
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 4177035 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 4176856
Query: 371 CA 376
CA
Sbjct: 4176855 CA 4176850
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / +2
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 4176851 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 4177030
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 4177031 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 4177210
Query: 15 LMGWI 1
LM I
Sbjct: 4177211 LMSKI 4177225
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / +1
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 4176856 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 4177035
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 4177036 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 4177188
>gb|CH401164.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000001 genomic
scaffold, whole genome shotgun sequence
Length = 11616395
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 4216801 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 4216622
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 4216621 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 4216442
Query: 371 CA 376
CA
Sbjct: 4216441 CA 4216436
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / +3
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 4216437 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 4216616
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 4216617 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 4216796
Query: 15 LMGWI 1
LM I
Sbjct: 4216797 LMSKI 4216811
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / +2
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 4216442 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 4216621
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 4216622 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 4216774
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 4216801 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 4216622
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 4216621 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 4216442
Query: 371 CA 376
CA
Sbjct: 4216441 CA 4216436
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / +3
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 4216437 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 4216616
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 4216617 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 4216796
Query: 15 LMGWI 1
LM I
Sbjct: 4216797 LMSKI 4216811
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / +2
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 4216442 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 4216621
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 4216622 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 4216774
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 22816138 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 22816317
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 22816318 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 22816419
Score = 113 bits (242), Expect = 2e-023
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+NN L C+P E GLL TVFDVS N L G +P + G+ KVEQLD++HN +G VP
Sbjct: 14347984 LNNSLTGCLPLESGLLANATVFDVSHNLLTGAIPATMGGLAKVEQLDLSHNTFTGVVPGD 14347805
Query: 191 ICALPRLKNLTISYNFFTGEPPSCA 265
+C LP L NL++SYNF GE C+
Sbjct: 14347804 VCGLPALTNLSVSYNFIAGEDAQCS 14347730
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 243 bits (525), Expect = 1e-062
Identities = 94/122 (77%), Positives = 106/122 (86%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
IN GL SC+PPEVG+LREVTVFDVSFN L GPLP VAGMRKVEQLDVAHN L+GA+P+A
Sbjct: 4179573 INTGLSSCLPPEVGMLREVTVFDVSFNRLAGPLPSAVAGMRKVEQLDVAHNLLTGAIPQA 4179394
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVD 370
+C LPRLKN T +YNFFTGEPPSCA VP GDRRNCLPNRP QRT +QCAAF+++PPV+
Sbjct: 4179393 VCELPRLKNFTFAYNFFTGEPPSCAHAVPRYGDRRNCLPNRPAQRTLRQCAAFFARPPVN 4179214
Query: 371 CA 376
CA
Sbjct: 4179213 CA 4179208
Score = 183 bits (394), Expect = 2e-044
Identities = 86/125 (68%), Positives = 89/125 (71%)
Frame = -1 / +2
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGGSPVKKL*EMVRFLSRGRA 196
AQ TGG NAAHC VR GRLGRQFL SP GT AQDGGSPVKKL V+FL RG +
Sbjct: 4179209 AQLTGGRAKNAAHCRSVRWAGRLGRQFLRSP*RGTACAQDGGSPVKKLYAKVKFLRRGSS 4179388
Query: 195 QMASGTAPDRRLCATSSCSTLRIPATCCGSGPTSELKLTSKTVTSRSKPTSGGTQESRPL 16
A G AP RLCATSSCST IPAT GSGP S LKLTS TVTSRS PTSGG QE RP+
Sbjct: 4179389 HTACGIAPVSRLCATSSCSTFLIPATADGSGPASRLKLTSNTVTSRSIPTSGGRQELRPV 4179568
Query: 15 LMGWI 1
LM I
Sbjct: 4179569 LMSKI 4179583
Score = 162 bits (348), Expect = 4e-038
Identities = 75/111 (67%), Positives = 82/111 (73%)
Frame = -3 / +1
Query: 370 VDGRLRVERGALLRRALCGAVGQAVPPVTVRRHDARAGRRLAGEEVVGDGQVLEPREGAD 191
VDGR R ERGAL +R L GAVGQAVPPV V RH RAGRRLAGEEVV +G+VLE R+ A
Sbjct: 4179214 VDGRAREERGALPQRPLGGAVGQAVPPVAVARHGVRAGRRLAGEEVVREGEVLEARQLAH 4179393
Query: 190 GLRDGPGQAVVRDVQLLHLAHPGHLLRQRANERVEADVEDGHLPEQADLRR 38
LR P + VVRDV+LLHL HPGH RQRA E VEA VE HL + DLRR
Sbjct: 4179394 RLRYRPREQVVRDVELLHLPHPGHRRRQRAGEPVEAHVEHRHLSQHPDLRR 4179546
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 23282212 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 23282391
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 23282392 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 23282493
Score = 113 bits (242), Expect = 2e-023
Identities = 44/85 (51%), Positives = 56/85 (65%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+NN L C+P E GLL TVFDVS N L G +P + G+ KVEQLD++HN +G VP
Sbjct: 14421682 LNNSLTGCLPLESGLLANATVFDVSHNLLTGAIPATMGGLAKVEQLDLSHNTFTGVVPGD 14421503
Query: 191 ICALPRLKNLTISYNFFTGEPPSCA 265
+C LP L NL++SYNF GE C+
Sbjct: 14421502 VCGLPALTNLSVSYNFIAGEDAQCS 14421428
>gb|CH401191.1| Oryza sativa (japonica cultivar-group) chromosome 5 scaffold000028 genomic
scaffold, whole genome shotgun sequence
Length = 7678539
Score = 197 bits (425), Expect(2) = 3e-051
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGLDSCVPPEVGLLREVTVFDVSFNSL GPLP +V GMRKVEQLDVAHNRL+GAVPEA
Sbjct: 4648171 INNGLDSCVPPEVGLLREVTVFDVSFNSLAGPLPPEVTGMRKVEQLDVAHNRLAGAVPEA 4647992
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPS 280
+C LPRLKN T SYN+FTGEPPSCARVVP+
Sbjct: 4647991 VCDLPRLKNFTFSYNYFTGEPPSCARVVPA 4647902
Score = 170 bits (365), Expect(4) = 7e-062
Identities = 75/89 (84%), Positives = 77/89 (86%)
Frame = -1 / +3
Query: 276 GTTRAQDGGSPVKKL*EMVRFLSRGRAQMASGTAPDRRLCATSSCSTLRIPATCCGSGPT 97
GTTRAQDGGSPVK L*E V+FL RGR+ ASGTAP RRLCATSSCST RIP T GSGP
Sbjct: 4647906 GTTRAQDGGSPVK*L*EKVKFLRRGRSHTASGTAPARRLCATSSCSTFRIPVTSGGSGPA 4648085
Query: 96 SELKLTSKTVTSRSKPTSGGTQESRPLLM 10
SELKLTS TVTSRSKPTSGGTQESRPLLM
Sbjct: 4648086 SELKLTSNTVTSRSKPTSGGTQESRPLLM 4648172
Score = 144 bits (308), Expect = 1e-032
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = -3 / +2
Query: 280 RRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLLRQRA 101
RRHDARAGRRLAGE VVG+G+VLE + A GLR G G+AVVRDV+LLHL HPGHL R+RA
Sbjct: 4647902 RRHDARAGRRLAGEVVVGEGEVLEAGQVAHGLRHGAGEAVVRDVELLHLPHPGHLRRERA 4648081
Query: 100 NERVEADVEDGHLPEQADLRR 38
ERVEADVE G LPEQADL R
Sbjct: 4648082 GERVEADVEHGDLPEQADLGR 4648144
Score = 57.4 bits (119), Expect(4) = 7e-062
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = -1 / +3
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGG 250
AQSTGG *NAAHC GVR GRLGRQF SPS T G
Sbjct: 4647804 AQSTGGAA*NAAHCRGVRW*GRLGRQFRRSPSAAGTTRAQDG 4647929
Score = 43.7 bits (89), Expect(2) = 3e-051
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2 / -2
Query: 374 AIIPRPVATGIPYAVRIASATCAVPMI 454
A IPRP+A G+P +R+A+AT A+PMI
Sbjct: 4647749 ARIPRPIAAGVPRPIRLAAATAALPMI 4647669
Score = 37.7 bits (76), Expect(4) = 7e-062
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / +3
Query: 596 INQEHY*SKHXND*PRTIVTVNFAVFIQRSSGGG 495
INQE Y* KH N+*PRTIV F+ G G
Sbjct: 4647537 INQELY*CKHNNN*PRTIVNGELVGFLFHFDGEG 4647638
Score = 33.1 bits (66), Expect(4) = 7e-062
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -1 / +1
Query: 453 IIGTAQVAEAMRTA*GIPVATGRGMMA 373
IIG A VA A R G P A GRGM A
Sbjct: 4647670 IIGKAAVAAARRMGRGTPAAMGRGMRA 4647750
>ref|NT_107223.1| Oryza sativa (japonica cultivar-group)
Length = 1494033
Score = 197 bits (425), Expect(2) = 7e-052
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGLDSCVPPEVGLLREVTVFDVSFNSL GPLP +V GMRKVEQLDVAHNRL+GAVPEA
Sbjct: 834038 INNGLDSCVPPEVGLLREVTVFDVSFNSLAGPLPPEVTGMRKVEQLDVAHNRLAGAVPEA 833859
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPS 280
+C LPRLKN T SYN+FTGEPPSCARVVP+
Sbjct: 833858 VCDLPRLKNFTFSYNYFTGEPPSCARVVPA 833769
Score = 170 bits (365), Expect(4) = 7e-062
Identities = 75/89 (84%), Positives = 77/89 (86%)
Frame = -1 / +1
Query: 276 GTTRAQDGGSPVKKL*EMVRFLSRGRAQMASGTAPDRRLCATSSCSTLRIPATCCGSGPT 97
GTTRAQDGGSPVK L*E V+FL RGR+ ASGTAP RRLCATSSCST RIP T GSGP
Sbjct: 833773 GTTRAQDGGSPVK*L*EKVKFLRRGRSHTASGTAPARRLCATSSCSTFRIPVTSGGSGPA 833952
Query: 96 SELKLTSKTVTSRSKPTSGGTQESRPLLM 10
SELKLTS TVTSRSKPTSGGTQESRPLLM
Sbjct: 833953 SELKLTSNTVTSRSKPTSGGTQESRPLLM 834039
Score = 144 bits (308), Expect(2) = 5e-033
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = -3 / +3
Query: 280 RRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLLRQRA 101
RRHDARAGRRLAGE VVG+G+VLE + A GLR G G+AVVRDV+LLHL HPGHL R+RA
Sbjct: 833769 RRHDARAGRRLAGEVVVGEGEVLEAGQVAHGLRHGAGEAVVRDVELLHLPHPGHLRRERA 833948
Query: 100 NERVEADVEDGHLPEQADLRR 38
ERVEADVE G LPEQADL R
Sbjct: 833949 GERVEADVEHGDLPEQADLGR 834011
Score = 57.4 bits (119), Expect(4) = 7e-062
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = -1 / +1
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGG 250
AQSTGG *NAAHC GVR GRLGRQF SPS T G
Sbjct: 833671 AQSTGGAA*NAAHCRGVRW*GRLGRQFRRSPSAAGTTRAQDG 833796
Score = 43.7 bits (89), Expect(2) = 7e-052
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 374 AIIPRPVATGIPYAVRIASATCAVPMI 454
A IPRP+A G+P +R+A+AT A+PMI
Sbjct: 833616 ARIPRPIAAGVPRPIRLAAATAALPMI 833536
Score = 37.7 bits (76), Expect(4) = 7e-062
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / +1
Query: 596 INQEHY*SKHXND*PRTIVTVNFAVFIQRSSGGG 495
INQE Y* KH N+*PRTIV F+ G G
Sbjct: 833404 INQELY*CKHNNN*PRTIVNGELVGFLFHFDGEG 833505
Score = 34.1 bits (68), Expect(2) = 5e-033
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1 / +3
Query: 597 YQSRTLLI*AXQ*LTTYNC 541
+QSRTLL+*A Q LTTYNC
Sbjct: 833403 HQSRTLLM*A*QQLTTYNC 833459
Score = 33.1 bits (66), Expect(4) = 7e-062
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -1 / +2
Query: 453 IIGTAQVAEAMRTA*GIPVATGRGMMA 373
IIG A VA A R G P A GRGM A
Sbjct: 833537 IIGKAAVAAARRMGRGTPAAMGRGMRA 833617
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
complete sequence
Length = 187956
Score = 197 bits (425), Expect(3) = 5e-053
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGLDSCVPPEVGLLREVTVFDVSFNSL GPLP +V GMRKVEQLDVAHNRL+GAVPEA
Sbjct: 29174 INNGLDSCVPPEVGLLREVTVFDVSFNSLAGPLPPEVTGMRKVEQLDVAHNRLAGAVPEA 28995
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPS 280
+C LPRLKN T SYN+FTGEPPSCARVVP+
Sbjct: 28994 VCDLPRLKNFTFSYNYFTGEPPSCARVVPA 28905
Score = 170 bits (365), Expect(4) = 8e-062
Identities = 75/89 (84%), Positives = 77/89 (86%)
Frame = -1 / +1
Query: 276 GTTRAQDGGSPVKKL*EMVRFLSRGRAQMASGTAPDRRLCATSSCSTLRIPATCCGSGPT 97
GTTRAQDGGSPVK L*E V+FL RGR+ ASGTAP RRLCATSSCST RIP T GSGP
Sbjct: 28909 GTTRAQDGGSPVK*L*EKVKFLRRGRSHTASGTAPARRLCATSSCSTFRIPVTSGGSGPA 29088
Query: 96 SELKLTSKTVTSRSKPTSGGTQESRPLLM 10
SELKLTS TVTSRSKPTSGGTQESRPLLM
Sbjct: 29089 SELKLTSNTVTSRSKPTSGGTQESRPLLM 29175
Score = 144 bits (308), Expect(2) = 6e-034
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = -3 / +3
Query: 280 RRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLLRQRA 101
RRHDARAGRRLAGE VVG+G+VLE + A GLR G G+AVVRDV+LLHL HPGHL R+RA
Sbjct: 28905 RRHDARAGRRLAGEVVVGEGEVLEAGQVAHGLRHGAGEAVVRDVELLHLPHPGHLRRERA 29084
Query: 100 NERVEADVEDGHLPEQADLRR 38
ERVEADVE G LPEQADL R
Sbjct: 29085 GERVEADVEHGDLPEQADLGR 29147
Score = 57.4 bits (119), Expect(4) = 8e-062
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = -1 / +1
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGG 250
AQSTGG *NAAHC GVR GRLGRQF SPS T G
Sbjct: 28807 AQSTGGAA*NAAHCRGVRW*GRLGRQFRRSPSAAGTTRAQDG 28932
Score = 43.7 bits (89), Expect(3) = 5e-053
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 374 AIIPRPVATGIPYAVRIASATCAVPMI 454
A IPRP+A G+P +R+A+AT A+PMI
Sbjct: 28752 ARIPRPIAAGVPRPIRLAAATAALPMI 28672
Score = 37.7 bits (76), Expect(4) = 8e-062
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / +1
Query: 596 INQEHY*SKHXND*PRTIVTVNFAVFIQRSSGGG 495
INQE Y* KH N+*PRTIV F+ G G
Sbjct: 28540 INQELY*CKHNNN*PRTIVNGELVGFLFHFDGEG 28641
Score = 34.1 bits (68), Expect(2) = 6e-034
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1 / +3
Query: 597 YQSRTLLI*AXQ*LTTYNC 541
+QSRTLL+*A Q LTTYNC
Sbjct: 28539 HQSRTLLM*A*QQLTTYNC 28595
Score = 33.1 bits (66), Expect(4) = 8e-062
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -1 / +2
Query: 453 IIGTAQVAEAMRTA*GIPVATGRGMMA 373
IIG A VA A R G P A GRGM A
Sbjct: 28673 IIGKAAVAAARRMGRGTPAAMGRGMRA 28753
Score = 28.1 bits (55), Expect(3) = 5e-053
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1 / -2
Query: 496 PPPLLRWMKTAKFTVTIVRGQSLXCLD**CS*LI 597
P P K TIVRGQ L CL ** S*L+
Sbjct: 28640 PSPSKWKRKPTSSPFTIVRGQLLLCLH**SS*LM 28539
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09,
complete sequence
Length = 145070
Score = 197 bits (425), Expect(3) = 3e-053
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGLDSCVPPEVGLLREVTVFDVSFNSL GPLP +V GMRKVEQLDVAHNRL+GAVPEA
Sbjct: 124771 INNGLDSCVPPEVGLLREVTVFDVSFNSLAGPLPPEVTGMRKVEQLDVAHNRLAGAVPEA 124592
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPS 280
+C LPRLKN T SYN+FTGEPPSCARVVP+
Sbjct: 124591 VCDLPRLKNFTFSYNYFTGEPPSCARVVPA 124502
Score = 170 bits (365), Expect(4) = 8e-062
Identities = 75/89 (84%), Positives = 77/89 (86%)
Frame = -1 / +3
Query: 276 GTTRAQDGGSPVKKL*EMVRFLSRGRAQMASGTAPDRRLCATSSCSTLRIPATCCGSGPT 97
GTTRAQDGGSPVK L*E V+FL RGR+ ASGTAP RRLCATSSCST RIP T GSGP
Sbjct: 124506 GTTRAQDGGSPVK*L*EKVKFLRRGRSHTASGTAPARRLCATSSCSTFRIPVTSGGSGPA 124685
Query: 96 SELKLTSKTVTSRSKPTSGGTQESRPLLM 10
SELKLTS TVTSRSKPTSGGTQESRPLLM
Sbjct: 124686 SELKLTSNTVTSRSKPTSGGTQESRPLLM 124772
Score = 144 bits (308), Expect(2) = 5e-034
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = -3 / +2
Query: 280 RRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLLRQRA 101
RRHDARAGRRLAGE VVG+G+VLE + A GLR G G+AVVRDV+LLHL HPGHL R+RA
Sbjct: 124502 RRHDARAGRRLAGEVVVGEGEVLEAGQVAHGLRHGAGEAVVRDVELLHLPHPGHLRRERA 124681
Query: 100 NERVEADVEDGHLPEQADLRR 38
ERVEADVE G LPEQADL R
Sbjct: 124682 GERVEADVEHGDLPEQADLGR 124744
Score = 57.4 bits (119), Expect(4) = 8e-062
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = -1 / +3
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGG 250
AQSTGG *NAAHC GVR GRLGRQF SPS T G
Sbjct: 124404 AQSTGGAA*NAAHCRGVRW*GRLGRQFRRSPSAAGTTRAQDG 124529
Score = 43.7 bits (89), Expect(3) = 3e-053
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 374 AIIPRPVATGIPYAVRIASATCAVPMI 454
A IPRP+A G+P +R+A+AT A+PMI
Sbjct: 124349 ARIPRPIAAGVPRPIRLAAATAALPMI 124269
Score = 37.7 bits (76), Expect(4) = 8e-062
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / +3
Query: 596 INQEHY*SKHXND*PRTIVTVNFAVFIQRSSGGG 495
INQE Y* KH N+*PRTIV F+ G G
Sbjct: 124137 INQELY*CKHNNN*PRTIVNGELVGFLFHFDGEG 124238
Score = 34.1 bits (68), Expect(2) = 5e-034
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1 / +2
Query: 597 YQSRTLLI*AXQ*LTTYNC 541
+QSRTLL+*A Q LTTYNC
Sbjct: 124136 HQSRTLLM*A*QQLTTYNC 124192
Score = 33.1 bits (66), Expect(4) = 8e-062
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -1 / +1
Query: 453 IIGTAQVAEAMRTA*GIPVATGRGMMA 373
IIG A VA A R G P A GRGM A
Sbjct: 124270 IIGKAAVAAARRMGRGTPAAMGRGMRA 124350
Score = 28.1 bits (55), Expect(3) = 3e-053
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1 / -2
Query: 496 PPPLLRWMKTAKFTVTIVRGQSLXCLD**CS*LI 597
P P K TIVRGQ L CL ** S*L+
Sbjct: 124237 PSPSKWKRKPTSSPFTIVRGQLLLCLH**SS*LM 124136
>gb|AACV01011020.1| Oryza sativa (japonica cultivar-group) chromosome 5 Ctg011020, whole
genome shotgun sequence
Length = 35223
Score = 197 bits (425), Expect(3) = 2e-054
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGLDSCVPPEVGLLREVTVFDVSFNSL GPLP +V GMRKVEQLDVAHNRL+GAVPEA
Sbjct: 24601 INNGLDSCVPPEVGLLREVTVFDVSFNSLAGPLPPEVTGMRKVEQLDVAHNRLAGAVPEA 24780
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPS 280
+C LPRLKN T SYN+FTGEPPSCARVVP+
Sbjct: 24781 VCDLPRLKNFTFSYNYFTGEPPSCARVVPA 24870
Score = 170 bits (365), Expect(4) = 8e-062
Identities = 75/89 (84%), Positives = 77/89 (86%)
Frame = -1 / -2
Query: 276 GTTRAQDGGSPVKKL*EMVRFLSRGRAQMASGTAPDRRLCATSSCSTLRIPATCCGSGPT 97
GTTRAQDGGSPVK L*E V+FL RGR+ ASGTAP RRLCATSSCST RIP T GSGP
Sbjct: 24866 GTTRAQDGGSPVK*L*EKVKFLRRGRSHTASGTAPARRLCATSSCSTFRIPVTSGGSGPA 24687
Query: 96 SELKLTSKTVTSRSKPTSGGTQESRPLLM 10
SELKLTS TVTSRSKPTSGGTQESRPLLM
Sbjct: 24686 SELKLTSNTVTSRSKPTSGGTQESRPLLM 24600
Score = 144 bits (308), Expect(2) = 1e-034
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = -3 / -1
Query: 280 RRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLLRQRA 101
RRHDARAGRRLAGE VVG+G+VLE + A GLR G G+AVVRDV+LLHL HPGHL R+RA
Sbjct: 24870 RRHDARAGRRLAGEVVVGEGEVLEAGQVAHGLRHGAGEAVVRDVELLHLPHPGHLRRERA 24691
Query: 100 NERVEADVEDGHLPEQADLRR 38
ERVEADVE G LPEQADL R
Sbjct: 24690 GERVEADVEHGDLPEQADLGR 24628
Score = 57.4 bits (119), Expect(4) = 8e-062
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = -1 / -2
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGG 250
AQSTGG *NAAHC GVR GRLGRQF SPS T G
Sbjct: 24968 AQSTGGAA*NAAHCRGVRW*GRLGRQFRRSPSAAGTTRAQDG 24843
Score = 43.7 bits (89), Expect(3) = 2e-054
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +2 / +3
Query: 374 AIIPRPVATGIPYAVRIASATCAVPMI 454
A IPRP+A G+P +R+A+AT A+PMI
Sbjct: 25023 ARIPRPIAAGVPRPIRLAAATAALPMI 25103
Score = 37.7 bits (76), Expect(4) = 8e-062
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = -2 / -2
Query: 596 INQEHY*SKHXND*PRTIVTVNFAVFIQRSSGGG 495
INQE Y* KH N+*PRTIV F+ G G
Sbjct: 25235 INQELY*CKHNNN*PRTIVNGELVGFLFHFDGEG 25134
Score = 34.1 bits (68), Expect(2) = 1e-034
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = -1 / -1
Query: 597 YQSRTLLI*AXQ*LTTYNC 541
+QSRTLL+*A Q LTTYNC
Sbjct: 25236 HQSRTLLM*A*QQLTTYNC 25180
Score = 33.1 bits (66), Expect(4) = 8e-062
Identities = 16/27 (59%), Positives = 16/27 (59%)
Frame = -1 / -3
Query: 453 IIGTAQVAEAMRTA*GIPVATGRGMMA 373
IIG A VA A R G P A GRGM A
Sbjct: 25102 IIGKAAVAAARRMGRGTPAAMGRGMRA 25022
Score = 28.1 bits (55), Expect(3) = 2e-054
Identities = 17/34 (50%), Positives = 18/34 (52%)
Frame = +1 / +1
Query: 496 PPPLLRWMKTAKFTVTIVRGQSLXCLD**CS*LI 597
P P K TIVRGQ L CL ** S*L+
Sbjct: 25135 PSPSKWKRKPTSSPFTIVRGQLLLCLH**SS*LM 25236
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1245
Score = 197 bits (425), Expect(2) = 2e-054
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGLDSCVPPEVGLLREVTVFDVSFNSL GPLP +V GMRKVEQLDVAHNRL+GAVPEA
Sbjct: 745 INNGLDSCVPPEVGLLREVTVFDVSFNSLAGPLPPEVTGMRKVEQLDVAHNRLAGAVPEA 924
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPS 280
+C LPRLKN T SYN+FTGEPPSCARVVP+
Sbjct: 925 VCDLPRLKNFTFSYNYFTGEPPSCARVVPA 1014
Score = 170 bits (365), Expect(2) = 1e-051
Identities = 75/89 (84%), Positives = 77/89 (86%)
Frame = -1 / -2
Query: 276 GTTRAQDGGSPVKKL*EMVRFLSRGRAQMASGTAPDRRLCATSSCSTLRIPATCCGSGPT 97
GTTRAQDGGSPVK L*E V+FL RGR+ ASGTAP RRLCATSSCST RIP T GSGP
Sbjct: 1010 GTTRAQDGGSPVK*L*EKVKFLRRGRSHTASGTAPARRLCATSSCSTFRIPVTSGGSGPA 831
Query: 96 SELKLTSKTVTSRSKPTSGGTQESRPLLM 10
SELKLTS TVTSRSKPTSGGTQESRPLLM
Sbjct: 830 SELKLTSNTVTSRSKPTSGGTQESRPLLM 744
Score = 144 bits (308), Expect = 1e-032
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = -3 / -1
Query: 280 RRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLLRQRA 101
RRHDARAGRRLAGE VVG+G+VLE + A GLR G G+AVVRDV+LLHL HPGHL R+RA
Sbjct: 1014 RRHDARAGRRLAGEVVVGEGEVLEAGQVAHGLRHGAGEAVVRDVELLHLPHPGHLRRERA 835
Query: 100 NERVEADVEDGHLPEQADLRR 38
ERVEADVE G LPEQADL R
Sbjct: 834 GERVEADVEHGDLPEQADLGR 772
Score = 57.4 bits (119), Expect(2) = 1e-051
Identities = 27/42 (64%), Positives = 27/42 (64%)
Frame = -1 / -2
Query: 375 AQSTGGCE*NAAHCCGVRCVGRLGRQFLLSPSEGTTRAQDGG 250
AQSTGG *NAAHC GVR GRLGRQF SPS T G
Sbjct: 1112 AQSTGGAA*NAAHCRGVRW*GRLGRQFRRSPSAAGTTRAQDG 987
Score = 41.8 bits (85), Expect(2) = 2e-054
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +2 / +3
Query: 374 AIIPRPVATGIPYAVRIASATCAVPM 451
A IPRP+A G+P +R+A+AT A+PM
Sbjct: 1167 ARIPRPIAAGVPRPIRLAAATAALPM 1244
>gb|CM000142.1| Oryza sativa (japonica cultivar-group) chromosome 5, whole genome shotgun
sequence
Length = 29309110
Score = 197 bits (425), Expect = 9e-049
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGLDSCVPPEVGLLREVTVFDVSFNSL GPLP +V GMRKVEQLDVAHNRL+GAVPEA
Sbjct: 4648171 INNGLDSCVPPEVGLLREVTVFDVSFNSLAGPLPPEVTGMRKVEQLDVAHNRLAGAVPEA 4647992
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPS 280
+C LPRLKN T SYN+FTGEPPSCARVVP+
Sbjct: 4647991 VCDLPRLKNFTFSYNYFTGEPPSCARVVPA 4647902
Score = 170 bits (365), Expect = 2e-040
Identities = 75/89 (84%), Positives = 77/89 (86%)
Frame = -1 / +3
Query: 276 GTTRAQDGGSPVKKL*EMVRFLSRGRAQMASGTAPDRRLCATSSCSTLRIPATCCGSGPT 97
GTTRAQDGGSPVK L*E V+FL RGR+ ASGTAP RRLCATSSCST RIP T GSGP
Sbjct: 4647906 GTTRAQDGGSPVK*L*EKVKFLRRGRSHTASGTAPARRLCATSSCSTFRIPVTSGGSGPA 4648085
Query: 96 SELKLTSKTVTSRSKPTSGGTQESRPLLM 10
SELKLTS TVTSRSKPTSGGTQESRPLLM
Sbjct: 4648086 SELKLTSNTVTSRSKPTSGGTQESRPLLM 4648172
Score = 144 bits (308), Expect = 1e-032
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = -3 / +2
Query: 280 RRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLLRQRA 101
RRHDARAGRRLAGE VVG+G+VLE + A GLR G G+AVVRDV+LLHL HPGHL R+RA
Sbjct: 4647902 RRHDARAGRRLAGEVVVGEGEVLEAGQVAHGLRHGAGEAVVRDVELLHLPHPGHLRRERA 4648081
Query: 100 NERVEADVEDGHLPEQADLRR 38
ERVEADVE G LPEQADL R
Sbjct: 4648082 GERVEADVEHGDLPEQADLGR 4648144
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 197 bits (425), Expect = 9e-049
Identities = 79/90 (87%), Positives = 84/90 (93%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
INNGLDSCVPPEVGLLREVTVFDVSFNSL GPLP +V GMRKVEQLDVAHNRL+GAVPEA
Sbjct: 4756766 INNGLDSCVPPEVGLLREVTVFDVSFNSLAGPLPPEVTGMRKVEQLDVAHNRLAGAVPEA 4756587
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPS 280
+C LPRLKN T SYN+FTGEPPSCARVVP+
Sbjct: 4756586 VCDLPRLKNFTFSYNYFTGEPPSCARVVPA 4756497
Score = 170 bits (365), Expect = 2e-040
Identities = 75/89 (84%), Positives = 77/89 (86%)
Frame = -1 / +1
Query: 276 GTTRAQDGGSPVKKL*EMVRFLSRGRAQMASGTAPDRRLCATSSCSTLRIPATCCGSGPT 97
GTTRAQDGGSPVK L*E V+FL RGR+ ASGTAP RRLCATSSCST RIP T GSGP
Sbjct: 4756501 GTTRAQDGGSPVK*L*EKVKFLRRGRSHTASGTAPARRLCATSSCSTFRIPVTSGGSGPA 4756680
Query: 96 SELKLTSKTVTSRSKPTSGGTQESRPLLM 10
SELKLTS TVTSRSKPTSGGTQESRPLLM
Sbjct: 4756681 SELKLTSNTVTSRSKPTSGGTQESRPLLM 4756767
Score = 144 bits (308), Expect = 1e-032
Identities = 62/81 (76%), Positives = 68/81 (83%)
Frame = -3 / +3
Query: 280 RRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLLRQRA 101
RRHDARAGRRLAGE VVG+G+VLE + A GLR G G+AVVRDV+LLHL HPGHL R+RA
Sbjct: 4756497 RRHDARAGRRLAGEVVVGEGEVLEAGQVAHGLRHGAGEAVVRDVELLHLPHPGHLRRERA 4756676
Query: 100 NERVEADVEDGHLPEQADLRR 38
ERVEADVE G LPEQADL R
Sbjct: 4756677 GERVEADVEHGDLPEQADLGR 4756739
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 133 bits (285), Expect(2) = 2e-037
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L E+TV DVS N L G LP+ +A MR +EQLDVA N L+G +PE
Sbjct: 4018299 LNSGVRSCIPPEIGHLGELTVLDVSNNQLQGTLPESMAWMRSLEQLDVARNELAGHIPEG 4018120
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALPRL+N T SYN+F GEP C R+
Sbjct: 4018119 ICALPRLRNFTYSYNYFCGEPERCLRL 4018039
Score = 46.4 bits (95), Expect(2) = 2e-037
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / -1
Query: 287 DRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
DR+NC+ RP QR QC AF +PPV C
Sbjct: 4018026 DRQNCIAGRPDQRPADQCLAFLHRPPVHC 4017940
>gb|CH401220.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000057 genomic
scaffold, whole genome shotgun sequence
Length = 3236776
Score = 133 bits (285), Expect(2) = 2e-037
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L E+TV DVS N L G LP+ +A MR +EQLDVA N L+G +PE
Sbjct: 1132816 LNSGVRSCIPPEIGHLGELTVLDVSNNQLQGTLPESMAWMRSLEQLDVARNELAGHIPEG 1132637
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALPRL+N T SYN+F GEP C R+
Sbjct: 1132636 ICALPRLRNFTYSYNYFCGEPERCLRL 1132556
Score = 46.4 bits (95), Expect(2) = 2e-037
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / -1
Query: 287 DRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
DR+NC+ RP QR QC AF +PPV C
Sbjct: 1132543 DRQNCIAGRPDQRPADQCLAFLHRPPVHC 1132457
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0534H07
Length = 144689
Score = 133 bits (285), Expect(2) = 2e-037
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L E+TV DVS N L G LP+ +A MR +EQLDVA N L+G +PE
Sbjct: 55085 LNSGVRSCIPPEIGHLGELTVLDVSNNQLQGTLPESMAWMRSLEQLDVARNELAGHIPEG 54906
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALPRL+N T SYN+F GEP C R+
Sbjct: 54905 ICALPRLRNFTYSYNYFCGEPERCLRL 54825
Score = 46.4 bits (95), Expect(2) = 2e-037
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / -1
Query: 287 DRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
DR+NC+ RP QR QC AF +PPV C
Sbjct: 54812 DRQNCIAGRPDQRPADQCLAFLHRPPVHC 54726
>gb|AACV01015282.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015282, whole
genome shotgun sequence
Length = 1598
Score = 133 bits (285), Expect(2) = 2e-037
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L E+TV DVS N L G LP+ +A MR +EQLDVA N L+G +PE
Sbjct: 1435 LNSGVRSCIPPEIGHLGELTVLDVSNNQLQGTLPESMAWMRSLEQLDVARNELAGHIPEG 1256
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALPRL+N T SYN+F GEP C R+
Sbjct: 1255 ICALPRLRNFTYSYNYFCGEPERCLRL 1175
Score = 46.4 bits (95), Expect(2) = 2e-037
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / -2
Query: 287 DRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
DR+NC+ RP QR QC AF +PPV C
Sbjct: 1162 DRQNCIAGRPDQRPADQCLAFLHRPPVHC 1076
>ref|NT_107187.1| Oryza sativa (japonica cultivar-group)
Length = 2541880
Score = 130 bits (278), Expect(2) = 3e-037
Identities = 48/87 (55%), Positives = 65/87 (74%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+SFN G LP+ + MR +EQL+VAHN L+G +P++
Sbjct: 1959898 LNSGISSCIPPEIGKLDKLTVLDLSFNDFAGALPETIGHMRALEQLNVAHNGLAGEIPDS 1959719
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALP LKN T S+NFF GEP C V
Sbjct: 1959718 ICALPHLKNFTYSHNFFCGEPHRCLEV 1959638
Score = 49.2 bits (101), Expect(2) = 3e-037
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / -1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
VP DR+NC+ RP QR+ ++C AF +PPV C
Sbjct: 1959640 VPHVDDRQNCIAGRPDQRSGEECIAFLHRPPVHC 1959539
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete
sequence
Length = 141582
Score = 130 bits (278), Expect(2) = 3e-037
Identities = 48/87 (55%), Positives = 65/87 (74%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+SFN G LP+ + MR +EQL+VAHN L+G +P++
Sbjct: 99027 LNSGISSCIPPEIGKLDKLTVLDLSFNDFAGALPETIGHMRALEQLNVAHNGLAGEIPDS 99206
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALP LKN T S+NFF GEP C V
Sbjct: 99207 ICALPHLKNFTYSHNFFCGEPHRCLEV 99287
Score = 49.2 bits (101), Expect(2) = 3e-037
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / +3
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
VP DR+NC+ RP QR+ ++C AF +PPV C
Sbjct: 99285 VPHVDDRQNCIAGRPDQRSGEECIAFLHRPPVHC 99386
>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full
insert sequence
Length = 1408
Score = 130 bits (278), Expect(2) = 3e-037
Identities = 48/87 (55%), Positives = 65/87 (74%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+SFN G LP+ + MR +EQL+VAHN L+G +P++
Sbjct: 848 LNSGISSCIPPEIGKLDKLTVLDLSFNDFAGALPETIGHMRALEQLNVAHNGLAGEIPDS 1027
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALP LKN T S+NFF GEP C V
Sbjct: 1028 ICALPHLKNFTYSHNFFCGEPHRCLEV 1108
Score = 49.2 bits (101), Expect(2) = 3e-037
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / +2
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
VP DR+NC+ RP QR+ ++C AF +PPV C
Sbjct: 1106 VPHVDDRQNCIAGRPDQRSGEECIAFLHRPPVHC 1207
>gb|CB657603.1|CB657603 OSJNEc13B13.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc13B13 3', mRNA sequence
Length = 803
Score = 130 bits (278), Expect(2) = 3e-037
Identities = 48/87 (55%), Positives = 65/87 (74%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+SFN G LP+ + MR +EQL+VAHN L+G +P++
Sbjct: 629 LNSGISSCIPPEIGKLDKLTVLDLSFNDFAGALPETIGHMRALEQLNVAHNGLAGEIPDS 450
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALP LKN T S+NFF GEP C V
Sbjct: 449 ICALPHLKNFTYSHNFFCGEPHRCLEV 369
Score = 49.2 bits (101), Expect(2) = 3e-037
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / -1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
VP DR+NC+ RP QR+ ++C AF +PPV C
Sbjct: 371 VPHVDDRQNCIAGRPDQRSGEECIAFLHRPPVHC 270
>gb|AU032129.1|AU032129 AU032129 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R3611_4Z, mRNA sequence
Length = 739
Score = 125 bits (267), Expect(2) = 6e-035
Identities = 50/87 (57%), Positives = 63/87 (72%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ S +PPE+G L E TV DVS N G LP+ +A MR +EQLDVA N L+G +PE
Sbjct: 68 LNSGVRSXIPPEIGHLGEFTVLDVSNNQXQGTLPESMAWMRSLEQLDVARNELAGHIPEG 247
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALPRL+N T SYN+F GEP C R+
Sbjct: 248 ICALPRLRNFTYSYNYFCGEPERCLRL 328
Score = 46.4 bits (95), Expect(2) = 6e-035
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 287 DRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
DR+NC+ RP QR QC AF +PPV C
Sbjct: 341 DRQNCIAGRPDQRPADQCLAFLHRPPVHC 427
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 10722420 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 10722241
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 10722240 ICELPRLRNLTIAGNYFCDEPVSCLHV 10722160
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 10722162 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 10722058
>ref|NT_079918.2| Oryza sativa (japonica cultivar-group)
Length = 553008
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 206601 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 206422
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 206421 ICELPRLRNLTIAGNYFCDEPVSCLHV 206341
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 206343 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 206239
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
sequence
Length = 171664
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 91172 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 91351
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 91352 ICELPRLRNLTIAGNYFCDEPVSCLHV 91432
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 91430 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 91534
>gb|AACV01007426.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007426, whole
genome shotgun sequence
Length = 26309
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 16951 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 17130
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 17131 ICELPRLRNLTIAGNYFCDEPVSCLHV 17211
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 17209 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 17313
>dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H06, full
insert sequence
Length = 1642
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 883 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 1062
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 1063 ICELPRLRNLTIAGNYFCDEPVSCLHV 1143
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 1141 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 1245
>dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E06, full
insert sequence
Length = 1511
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 883 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 1062
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 1063 ICELPRLRNLTIAGNYFCDEPVSCLHV 1143
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 1141 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 1245
>dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133O22, full
insert sequence
Length = 1451
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 879 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 1058
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 1059 ICELPRLRNLTIAGNYFCDEPVSCLHV 1139
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +3
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 1137 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 1241
>ref|XM_468996.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1447
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 849 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 1028
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 1029 ICELPRLRNLTIAGNYFCDEPVSCLHV 1109
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +3
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 1107 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 1211
>dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D10, full
insert sequence
Length = 1122
Score = 118 bits (252), Expect(2) = 3e-034
Identities = 46/87 (52%), Positives = 60/87 (68%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N + SC+PPE+G L+++ V D+S N L G LP V M +E L+V HN L+G VPEA
Sbjct: 516 LNTSISSCIPPEIGKLKKLRVLDLSHNELAGELPASVGDMESLEVLNVGHNMLAGEVPEA 695
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
IC LPRL+NLTI+ N+F EP SC V
Sbjct: 696 ICELPRLRNLTIAGNYFCDEPVSCLHV 776
Score = 51.0 bits (105), Expect(2) = 3e-034
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +3
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDCA 376
VP DR NC+P+ P QR+P++C AF +PP CA
Sbjct: 774 VPLRDDRMNCIPDWPHQRSPEECIAFAHRPPPHCA 878
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 86.3 bits (182), Expect(3) = 1e-030
Identities = 30/61 (49%), Positives = 47/61 (77%)
Frame = +2 / -2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+SFN G LP+ + MR +EQL+VAHN L+G +P++
Sbjct: 6488111 LNSGISSCIPPEIGKLDKLTVLDLSFNDFAGALPETIGHMRALEQLNVAHNGLAGEIPDS 6487932
Query: 191 I 193
+
Sbjct: 6487931 M 6487929
Score = 49.2 bits (101), Expect(3) = 1e-030
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / -1
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
VP DR+NC+ RP QR+ ++C AF +PPV C
Sbjct: 6487851 VPHVDDRQNCIAGRPDQRSGEECIAFLHRPPVHC 6487750
Score = 39.6 bits (80), Expect(3) = 1e-030
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +2 / -1
Query: 200 LPRLKNLTISYNFFTGEPPSCARV 271
LP LKN T S+NFF GEP C V
Sbjct: 6487920 LPHLKNFTYSHNFFCGEPHRCLEV 6487849
>gb|AACV01008082.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008082, whole
genome shotgun sequence
Length = 60297
Score = 86.3 bits (182), Expect(3) = 1e-030
Identities = 30/61 (49%), Positives = 47/61 (77%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L ++TV D+SFN G LP+ + MR +EQL+VAHN L+G +P++
Sbjct: 43258 LNSGISSCIPPEIGKLDKLTVLDLSFNDFAGALPETIGHMRALEQLNVAHNGLAGEIPDS 43079
Query: 191 I 193
+
Sbjct: 43078 M 43076
Score = 49.2 bits (101), Expect(3) = 1e-030
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +2 / -2
Query: 272 VPSDGDRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
VP DR+NC+ RP QR+ ++C AF +PPV C
Sbjct: 42998 VPHVDDRQNCIAGRPDQRSGEECIAFLHRPPVHC 42897
Score = 39.6 bits (80), Expect(3) = 1e-030
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +2 / -2
Query: 200 LPRLKNLTISYNFFTGEPPSCARV 271
LP LKN T S+NFF GEP C V
Sbjct: 43067 LPHLKNFTYSHNFFCGEPHRCLEV 42996
>gb|AU092661.1|AU092661 AU092661 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C52782, mRNA sequence
Length = 689
Score = 108 bits (230), Expect(2) = 7e-030
Identities = 44/74 (59%), Positives = 54/74 (72%)
Frame = +2 / +2
Query: 50 GLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEAICALPRLKNLTIS 229
G L ++TV DVS N L G LP+ +A MR +EQLDVA N L+G +PE ICALPRL+N T S
Sbjct: 62 GHLGKLTVLDVSTNQLQGTLPESMAWMRSLEQLDVARNELAGHIPEGICALPRLRNFTYS 241
Query: 230 YNFFTGEPPSCARV 271
YN+F GEP C R+
Sbjct: 242 YNYFCGEPERCLRL 283
Score = 46.4 bits (95), Expect(2) = 7e-030
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 287 DRRNCLPNRPTQRTPQQCAAFYSQPPVDC 373
DR+NC+ RP QR QC AF +PPV C
Sbjct: 296 DRQNCIAGRPDQRPADQCLAFLHRPPVHC 382
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 133 bits (285), Expect = 2e-029
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L E+TV DVS N L G LP+ +A MR +EQLDVA N L+G +PE
Sbjct: 3949565 LNSGVRSCIPPEIGHLGELTVLDVSNNQLQGTLPESMAWMRSLEQLDVARNELAGHIPEG 3949386
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALPRL+N T SYN+F GEP C R+
Sbjct: 3949385 ICALPRLRNFTYSYNYFCGEPERCLRL 3949305
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 133 bits (285), Expect = 2e-029
Identities = 52/87 (59%), Positives = 66/87 (75%)
Frame = +2 / -1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N+G+ SC+PPE+G L E+TV DVS N L G LP+ +A MR +EQLDVA N L+G +PE
Sbjct: 4062227 LNSGVRSCIPPEIGHLGELTVLDVSNNQLQGTLPESMAWMRSLEQLDVARNELAGHIPEG 4062048
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARV 271
ICALPRL+N T SYN+F GEP C R+
Sbjct: 4062047 ICALPRLRNFTYSYNYFCGEPERCLRL 4061967
>dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D06, full
insert sequence
Length = 2042
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 863 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 1042
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 1043 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 1144
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -3 / -2
Query: 292 PVTVRRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLL 113
P V R D A RRLAG+EVVG G+VLE R+ AD LR G+AVV +V+LL + PG L
Sbjct: 1144 PAIVERLDVHAHRRLAGDEVVGVGEVLEVRQVADALRHVAGEAVVPEVELLDVLEPGELA 965
Query: 112 RQRANERVEADVEDGHLPEQADLRR 38
A+E V ADVE G E A+LRR
Sbjct: 964 GDGAHEAVVADVEHGEAGEHAELRR 890
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 340 ALLRRALCGAVGQAVPPVTVR 278
ALLRR L GA G AVP + R
Sbjct: 1189 ALLRRPLVGAAGDAVPAIVER 1127
>dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A04, full
insert sequence
Length = 1985
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 864 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 1043
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 1044 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 1145
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -3 / -1
Query: 292 PVTVRRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLL 113
P V R D A RRLAG+EVVG G+VLE R+ AD LR G+AVV +V+LL + PG L
Sbjct: 1145 PAIVERLDVHAHRRLAGDEVVGVGEVLEVRQVADALRHVAGEAVVPEVELLDVLEPGELA 966
Query: 112 RQRANERVEADVEDGHLPEQADLRR 38
A+E V ADVE G E A+LRR
Sbjct: 965 GDGAHEAVVADVEHGEAGEHAELRR 891
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 340 ALLRRALCGAVGQAVPPVTVR 278
ALLRR L GA G AVP + R
Sbjct: 1190 ALLRRPLVGAAGDAVPAIVER 1128
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1103C09
Length = 163996
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 7910 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 8089
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 8090 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 8191
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -3 / -1
Query: 292 PVTVRRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLL 113
P V R D A RRLAG+EVVG G+VLE R+ AD LR G+AVV +V+LL + PG L
Sbjct: 8191 PAIVERLDVHAHRRLAGDEVVGVGEVLEVRQVADALRHVAGEAVVPEVELLDVLEPGELA 8012
Query: 112 RQRANERVEADVEDGHLPEQADLRR 38
A+E V ADVE G E A+LRR
Sbjct: 8011 GDGAHEAVVADVEHGEAGEHAELRR 7937
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 340 ALLRRALCGAVGQAVPPVTVR 278
ALLRR L GA G AVP + R
Sbjct: 8236 ALLRRPLVGAAGDAVPAIVER 8174
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0451D05
Length = 148381
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 68954 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 69133
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 69134 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 69235
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -3 / -1
Query: 292 PVTVRRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLL 113
P V R D A RRLAG+EVVG G+VLE R+ AD LR G+AVV +V+LL + PG L
Sbjct: 69235 PAIVERLDVHAHRRLAGDEVVGVGEVLEVRQVADALRHVAGEAVVPEVELLDVLEPGELA 69056
Query: 112 RQRANERVEADVEDGHLPEQADLRR 38
A+E V ADVE G E A+LRR
Sbjct: 69055 GDGAHEAVVADVEHGEAGEHAELRR 68981
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 340 ALLRRALCGAVGQAVPPVTVR 278
ALLRR L GA G AVP + R
Sbjct: 69280 ALLRRPLVGAAGDAVPAIVER 69218
>gb|AACV01001725.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001725, whole
genome shotgun sequence
Length = 24955
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / -3
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 2102 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 1923
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 1922 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 1821
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -3 / +3
Query: 292 PVTVRRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLL 113
P V R D A RRLAG+EVVG G+VLE R+ AD LR G+AVV +V+LL + PG L
Sbjct: 1821 PAIVERLDVHAHRRLAGDEVVGVGEVLEVRQVADALRHVAGEAVVPEVELLDVLEPGELA 2000
Query: 112 RQRANERVEADVEDGHLPEQADLRR 38
A+E V ADVE G E A+LRR
Sbjct: 2001 GDGAHEAVVADVEHGEAGEHAELRR 2075
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / +3
Query: 340 ALLRRALCGAVGQAVPPVTVR 278
ALLRR L GA G AVP + R
Sbjct: 1776 ALLRRPLVGAAGDAVPAIVER 1838
>ref|NM_192605.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1713
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +1
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 805 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 984
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 985 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 1086
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -3 / -1
Query: 292 PVTVRRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLL 113
P V R D A RRLAG+EVVG G+VLE R+ AD LR G+AVV +V+LL + PG L
Sbjct: 1086 PAIVERLDVHAHRRLAGDEVVGVGEVLEVRQVADALRHVAGEAVVPEVELLDVLEPGELA 907
Query: 112 RQRANERVEADVEDGHLPEQADLRR 38
A+E V ADVE G E A+LRR
Sbjct: 906 GDGAHEAVVADVEHGEAGEHAELRR 832
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 340 ALLRRALCGAVGQAVPPVTVR 278
ALLRR L GA G AVP + R
Sbjct: 1131 ALLRRPLVGAAGDAVPAIVER 1069
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 6279161 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 6279340
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 6279341 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 6279442
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -3 / -3
Query: 292 PVTVRRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLL 113
P V R D A RRLAG+EVVG G+VLE R+ AD LR G+AVV +V+LL + PG L
Sbjct: 6279442 PAIVERLDVHAHRRLAGDEVVGVGEVLEVRQVADALRHVAGEAVVPEVELLDVLEPGELA 6279263
Query: 112 RQRANERVEADVEDGHLPEQADLRR 38
A+E V ADVE G E A+LRR
Sbjct: 6279262 GDGAHEAVVADVEHGEAGEHAELRR 6279188
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 340 ALLRRALCGAVGQAVPPVTVR 278
ALLRR L GA G AVP + R
Sbjct: 6279487 ALLRRPLVGAAGDAVPAIVER 6279425
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 133 bits (284), Expect = 3e-029
Identities = 52/94 (55%), Positives = 66/94 (70%)
Frame = +2 / +2
Query: 11 INNGLDSCVPPEVGLLREVTVFDVSFNSLVGPLPQQVAGMRKVEQLDVAHNRLSGAVPEA 190
+N GL SC+PPE+G+L + V DVS NSL+G +P ++A + +EQLD+ HNRL+G VPE
Sbjct: 6191015 MNTGLKSCIPPELGMLTGLAVLDVSHNSLMGAIPGELARLENIEQLDLGHNRLTGDVPEG 6191194
Query: 191 ICALPRLKNLTISYNFFTGEPPSCARVVPSDGDR 292
IC LP L+N T SYNF TGEPP C V D R
Sbjct: 6191195 ICHLPHLQNFTYSYNFITGEPPVCMHVKAFDDRR 6191296
Score = 95.0 bits (201), Expect(2) = 3e-021
Identities = 46/85 (54%), Positives = 55/85 (64%)
Frame = -3 / -2
Query: 292 PVTVRRHDARAGRRLAGEEVVGDGQVLEPREGADGLRDGPGQAVVRDVQLLHLAHPGHLL 113
P V R D A RRLAG+EVVG G+VLE R+ AD LR G+AVV +V+LL + PG L
Sbjct: 6191296 PAIVERLDVHAHRRLAGDEVVGVGEVLEVRQVADALRHVAGEAVVPEVELLDVLEPGELA 6191117
Query: 112 RQRANERVEADVEDGHLPEQADLRR 38
A+E V ADVE G E A+LRR
Sbjct: 6191116 GDGAHEAVVADVEHGEAGEHAELRR 6191042
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 340 ALLRRALCGAVGQAVPPVTVR 278
ALLRR L GA G AVP + R
Sbjct: 6191341 ALLRRPLVGAAGDAVPAIVER 6191279
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 2,830,105,089
Number of Sequences: 438736
Number of extensions: 38644672
Number of successful extensions: 342892
Number of sequences better than 1.0e-020: 162
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 141652152252
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)