TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3092809.2.1
(652 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK060010.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-064
dbj|AK070201.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-064
dbj|AK105938.1| Oryza sativa (japonica cultivar-group) cDNA... 250 1e-064
gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 ... 250 1e-064
gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 ... 250 1e-064
gb|AACV01008143.1| Oryza sativa (japonica cultivar-group) c... 250 1e-064
ref|NT_107188.1| Oryza sativa (japonica cultivar-group) 250 1e-064
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 250 1e-064
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 250 1e-064
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 250 1e-064
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 250 1e-064
gb|CF281026.1|CF281026 14ETL--07-O17.g1 Rice etiolated leaf... 236 2e-060
gb|CV728855.1|CV728855 FLO--01-G09.g1 Rice flower lambda ph... 209 3e-052
gb|CF278557.1|CF278557 14ETL--04-I04.g1 Rice etiolated leaf... 144 1e-032
dbj|AP004333.3| Oryza sativa (japonica cultivar-group) geno... 86 4e-031
gb|AACV01017061.1| Oryza sativa (japonica cultivar-group) c... 86 5e-031
dbj|AK070356.1| Oryza sativa (japonica cultivar-group) cDNA... 86 5e-031
ref|XM_479614.1| Oryza sativa (japonica cultivar-group), mRNA 86 5e-031
gb|CH401173.1| Oryza sativa (japonica cultivar-group) chrom... 87 7e-028
ref|NT_107192.1| Oryza sativa (japonica cultivar-group) 87 7e-028
gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbar... 87 7e-028
gb|AC137931.3| Oryza sativa (japonica cultivar-group) chrom... 87 7e-028
gb|AACV01006425.1| Oryza sativa (japonica cultivar-group) c... 87 7e-028
dbj|AK100767.1| Oryza sativa (japonica cultivar-group) cDNA... 87 7e-028
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 75 1e-025
gb|CH401188.1| Oryza sativa (japonica cultivar-group) chrom... 72 1e-025
emb|AL662936.4|OSJN00137 Oryza sativa genomic DNA, chromoso... 75 1e-025
emb|AL662933.4|OSJN00145 Oryza sativa (japonica cultivar-gr... 75 1e-025
gb|AACV01008846.1| Oryza sativa (japonica cultivar-group) c... 72 1e-025
ref|XM_474657.1| Oryza sativa (japonica cultivar-group), p... 71 5e-025
dbj|AK103462.1| Oryza sativa (japonica cultivar-group) cDNA... 75 6e-023
dbj|AK106087.1| Oryza sativa (japonica cultivar-group) cDNA... 75 6e-023
dbj|AK120852.1| Oryza sativa (japonica cultivar-group) cDNA... 75 6e-023
ref|XM_474658.1| Oryza sativa (japonica cultivar-group), p... 75 6e-023
gb|AC150702.2| Oryza sativa (japonica cultivar-group) chrom... 64 7e-023
dbj|AK110972.1| Oryza sativa (japonica cultivar-group) cDNA... 64 8e-023
ref|NT_079914.2| Oryza sativa (japonica cultivar-group) 76 9e-022
gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 ... 76 9e-022
gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 ... 76 9e-022
ref|XM_470312.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-021
dbj|AK068662.1| Oryza sativa (japonica cultivar-group) cDNA... 76 1e-021
ref|XM_470168.1| Oryza sativa (japonica cultivar-group), mRNA 76 1e-021
gb|CH401189.1| Oryza sativa (japonica cultivar-group) chrom... 71 6e-021
gb|AACV01009681.1| Oryza sativa (japonica cultivar-group) c... 71 6e-021
>dbj|AK060010.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E01, full
insert sequence
Length = 1166
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 607 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 786
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 787 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 966
Query: 410 RHL 418
+ L
Sbjct: 967 KLL 975
Score = 117 bits (250), Expect(2) = 4e-030
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -1
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 836 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 657
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 656 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 558
Score = 38.2 bits (77), Expect(2) = 4e-030
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -1
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 962 *SSNALKL*FTEVKPPSTMR 903
>dbj|AK070201.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042C15, full
insert sequence
Length = 1169
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 611 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 790
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 791 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 970
Query: 410 RHL 418
+ L
Sbjct: 971 KLL 979
Score = 117 bits (250), Expect(2) = 4e-030
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -3
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 840 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 661
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 660 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 562
Score = 38.2 bits (77), Expect(2) = 4e-030
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -3
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 966 *SSNALKL*FTEVKPPSTMR 907
>dbj|AK105938.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B09, full
insert sequence
Length = 1166
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 607 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 786
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 787 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 966
Query: 410 RHL 418
+ L
Sbjct: 967 KLL 975
Score = 117 bits (250), Expect(2) = 4e-030
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -1
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 836 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 657
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 656 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 558
Score = 38.2 bits (77), Expect(2) = 4e-030
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -1
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 962 *SSNALKL*FTEVKPPSTMR 903
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence,
complete sequence
Length = 126862
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +3
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 8247 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 8426
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 8427 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 8606
Query: 410 RHL 418
+ L
Sbjct: 8607 KLL 8615
Score = 117 bits (250), Expect(2) = 3e-030
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -1
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 8476 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 8297
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 8296 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 8198
Score = 38.2 bits (77), Expect(2) = 3e-030
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -1
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 8602 *SSNALKL*FTEVKPPSTMR 8543
>gb|AC135595.5| Oryza sativa chromosome 3 BAC OSJNBa0028F23 genomic sequence, complete
sequence
Length = 166888
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / -3
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 28202 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 28023
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 28022 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 27843
Query: 410 RHL 418
+ L
Sbjct: 27842 KLL 27834
Score = 117 bits (250), Expect(2) = 3e-030
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / +1
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 27973 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 28152
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 28153 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 28251
Score = 38.2 bits (77), Expect(2) = 3e-030
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / +1
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 27847 *SSNALKL*FTEVKPPSTMR 27906
>gb|AACV01008143.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg008143, whole
genome shotgun sequence
Length = 36472
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / -1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 10144 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 9965
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 9964 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 9785
Query: 410 RHL 418
+ L
Sbjct: 9784 KLL 9776
Score = 117 bits (250), Expect(2) = 3e-030
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / +3
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 9915 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 10094
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 10095 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 10193
Score = 38.2 bits (77), Expect(2) = 3e-030
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / +3
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 9789 *SSNALKL*FTEVKPPSTMR 9848
>ref|NT_107188.1| Oryza sativa (japonica cultivar-group)
Length = 1363716
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 293285 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 293464
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 293465 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 293644
Query: 410 RHL 418
+ L
Sbjct: 293645 KLL 293653
Score = 117 bits (250), Expect(2) = 3e-030
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -1
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 293514 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 293335
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 293334 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 293236
Score = 75.8 bits (159), Expect(2) = 9e-022
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / +3
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
GP YTASKHAV+GL ++ A ELGRHGVRVNCVSP V T LS
Sbjct: 1356852 GPAAYTASKHAVLGLVRAAAGELGRHGVRVNCVSPGGVATPLS 1356980
Score = 51.5 bits (106), Expect(2) = 9e-022
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2 / +3
Query: 257 LKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVN 379
L+G DVA+A+L+LASD+A +VS NL+VDG TAVN
Sbjct: 1357041 LRGKVLKAADVAEAMLFLASDQAAFVSGHNLVVDGATTAVN 1357163
Score = 38.2 bits (77), Expect(2) = 3e-030
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -1
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 293640 *SSNALKL*FTEVKPPSTMR 293581
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013 genomic
scaffold, whole genome shotgun sequence
Length = 9810738
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 7329544 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 7329723
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 7329724 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 7329903
Query: 410 RHL 418
+ L
Sbjct: 7329904 KLL 7329912
Score = 117 bits (250), Expect(2) = 3e-030
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -2
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 7329773 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 7329594
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 7329593 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 7329495
Score = 38.2 bits (77), Expect(2) = 3e-030
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -2
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 7329899 *SSNALKL*FTEVKPPSTMR 7329840
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 34595707 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 34595886
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 34595887 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 34596066
Query: 410 RHL 418
+ L
Sbjct: 34596067 KLL 34596075
Score = 117 bits (250), Expect = 1e-024
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -3
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 34595936 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 34595757
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 34595756 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 34595658
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +3
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 33727350 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 33727529
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 33727530 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 33727709
Query: 410 RHL 418
+ L
Sbjct: 33727710 KLL 33727718
Score = 117 bits (250), Expect = 1e-024
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -1
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 33727579 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 33727400
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 33727399 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 33727301
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 250 bits (540), Expect = 1e-064
Identities = 103/123 (83%), Positives = 115/123 (93%)
Frame = +2 / +2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDF 229
GPH YTA+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF
Sbjct: 33636878 GPHSYTATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDF 33637057
Query: 230 LAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED*
Sbjct: 33637058 FAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*Q 33637237
Query: 410 RHL 418
+ L
Sbjct: 33637238 KLL 33637246
Score = 117 bits (250), Expect = 1e-024
Identities = 52/93 (55%), Positives = 59/93 (63%)
Frame = -2 / -3
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 33637107 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 33636928
Query: 99 LVSPTTACLDAV*TCGPVPPMALATLASDTMEP 1
LV PTTACL AV GP PPM L TL ++ M+P
Sbjct: 33636927 LVRPTTACLVAVYE*GPNPPMTLETLPNEMMDP 33636829
>gb|CF281026.1|CF281026 14ETL--07-O17.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--07-O17, mRNA sequence
Length = 603
Score = 236 bits (509), Expect = 2e-060
Identities = 98/117 (83%), Positives = 110/117 (94%)
Frame = +2 / -2
Query: 68 ASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLAFVGG 247
A+KHAVVGLTK+VA ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF AFVGG
Sbjct: 602 ATKHAVVGLTKNVAGELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDFFAFVGG 423
Query: 248 EANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*LRHL 418
EANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED* + L
Sbjct: 422 EANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*QKLL 252
Score = 94.1 bits (199), Expect(2) = 3e-023
Identities = 41/71 (57%), Positives = 45/71 (63%)
Frame = -2 / +1
Query: 279 GMASTPLRLASPPTXXXXXXXXXXXXAPWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATL 100
G STP R ASPPT +PWGR G++ AVGTA*GDTQ TR P P+S AT
Sbjct: 391 GSRSTPFRFASPPTKAKKSFRASSLRSPWGRYGMERAVGTA*GDTQFTRIPCFPNSPATF 570
Query: 99 LVSPTTACLDA 67
LV PTTACL A
Sbjct: 571 LVRPTTACLVA 603
Score = 38.2 bits (77), Expect(2) = 3e-023
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / +1
Query: 405 *SSNALRLLFTAVKPPSTMR 346
*SSNAL+L FT VKPPSTMR
Sbjct: 265 *SSNALKL*FTEVKPPSTMR 324
>gb|CV728855.1|CV728855 FLO--01-G09.g1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--01-G09,
mRNA sequence
Length = 478
Score = 209 bits (450), Expect = 3e-052
Identities = 86/102 (84%), Positives = 96/102 (94%)
Frame = +2 / -1
Query: 113 ELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLAFVGGEANLKGVDAMPEDVA 292
ELG+HG+RVNCVSPYAVPTALSMP+LPQG R DDALKDF AFVGGEANLKGVD +P+DVA
Sbjct: 475 ELGKHGIRVNCVSPYAVPTALSMPYLPQGERKDDALKDFFAFVGGEANLKGVDLLPKDVA 296
Query: 293 QAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*LRHL 418
QAVLYLASDEARY+SA+NLMVDGGFT+VN+NLRAFED* + L
Sbjct: 295 QAVLYLASDEARYISALNLMVDGGFTSVNHNLRAFED*QKLL 170
>gb|CF278557.1|CF278557 14ETL--04-I04.g1 Rice etiolated leaf plasmid cDNA library (14ETL)
Oryza sativa (japonica cultivar-group) cDNA clone
14ETL--04-I04, mRNA sequence
Length = 410
Score = 144 bits (308), Expect = 1e-032
Identities = 61/74 (82%), Positives = 68/74 (91%)
Frame = +2 / -3
Query: 197 GARADDALKDFLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAV 376
G R DDALKDF AFVGGEANLKGVD +P+DVAQAVLYLASDEARY+SA+NLMVDGGFT+V
Sbjct: 408 GERKDDALKDFFAFVGGEANLKGVDLLPKDVAQAVLYLASDEARYISALNLMVDGGFTSV 229
Query: 377 NNNLRAFED*LRHL 418
N+NLRAFED* + L
Sbjct: 228 NHNLRAFED*QKLL 187
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0034A04
Length = 151263
Score = 85.8 bits (181), Expect(3) = 4e-031
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +2 / -2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG D A +D
Sbjct: 27803 GPHAYTASKHALVGLTKNAACELGEHGIRVNCISPFGVATPMLVNAWRQGQGGDHADED 27627
Score = 56.1 bits (116), Expect(3) = 4e-031
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +2 / -2
Query: 251 ANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
A LKG D+A+A ++LASDE+RYVS NL+VDGG T N
Sbjct: 27566 ATLKGPTLRAGDIAEAAVFLASDESRYVSGHNLVVDGGVTTSRN 27435
Score = 34.5 bits (69), Expect(3) = 4e-031
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1 / -1
Query: 7 HRVAGQRGQRHRRDGPARLHGV 72
HRV G+RG R R PAR+HG+
Sbjct: 27846 HRVGGERGGRAGRPRPARVHGL 27781
>gb|AACV01017061.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg017061, whole
genome shotgun sequence
Length = 10712
Score = 85.8 bits (181), Expect(3) = 5e-031
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG D A +D
Sbjct: 10303 GPHAYTASKHALVGLTKNAACELGEHGIRVNCISPFGVATPMLVNAWRQGQGGDHADED 10479
Score = 56.1 bits (116), Expect(3) = 5e-031
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +2 / +1
Query: 251 ANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
A LKG D+A+A ++LASDE+RYVS NL+VDGG T N
Sbjct: 10540 ATLKGPTLRAGDIAEAAVFLASDESRYVSGHNLVVDGGVTTSRN 10671
Score = 34.5 bits (69), Expect(3) = 5e-031
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1 / +3
Query: 7 HRVAGQRGQRHRRDGPARLHGV 72
HRV G+RG R R PAR+HG+
Sbjct: 10260 HRVGGERGGRAGRPRPARVHGL 10325
>dbj|AK070356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050B21, full
insert sequence
Length = 1221
Score = 85.8 bits (181), Expect(3) = 5e-031
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +2 / +2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG D A +D
Sbjct: 650 GPHAYTASKHALVGLTKNAACELGEHGIRVNCISPFGVATPMLVNAWRQGQGGDHADED 826
Score = 56.1 bits (116), Expect(3) = 5e-031
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +2 / +2
Query: 251 ANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
A LKG D+A+A ++LASDE+RYVS NL+VDGG T N
Sbjct: 887 ATLKGPTLRAGDIAEAAVFLASDESRYVSGHNLVVDGGVTTSRN 1018
Score = 34.5 bits (69), Expect(3) = 5e-031
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 7 HRVAGQRGQRHRRDGPARLHGV 72
HRV G+RG R R PAR+HG+
Sbjct: 607 HRVGGERGGRAGRPRPARVHGL 672
>ref|XM_479614.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1221
Score = 85.8 bits (181), Expect(3) = 5e-031
Identities = 34/59 (57%), Positives = 42/59 (71%)
Frame = +2 / +2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKD 226
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG D A +D
Sbjct: 650 GPHAYTASKHALVGLTKNAACELGEHGIRVNCISPFGVATPMLVNAWRQGQGGDHADED 826
Score = 56.1 bits (116), Expect(3) = 5e-031
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = +2 / +2
Query: 251 ANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
A LKG D+A+A ++LASDE+RYVS NL+VDGG T N
Sbjct: 887 ATLKGPTLRAGDIAEAAVFLASDESRYVSGHNLVVDGGVTTSRN 1018
Score = 34.5 bits (69), Expect(3) = 5e-031
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1 / +1
Query: 7 HRVAGQRGQRHRRDGPARLHGV 72
HRV G+RG R R PAR+HG+
Sbjct: 607 HRVGGERGGRAGRPRPARVHGL 672
>gb|CH401173.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000010 genomic
scaffold, whole genome shotgun sequence
Length = 13858245
Score = 87.2 bits (184), Expect(2) = 8e-022
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = -2 / -2
Query: 198 PWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAV*TCGPVPPMALATLA 19
PW + + V T G+ QLTR PW PSS A LVSPT ACL+AV* CGP PP ATLA
Sbjct: 10560464 PWRQALMSIGVATPKGEMQLTRMPWAPSSQAAFLVSPTMACLEAV*ACGPRPPSTPATLA 10560285
Query: 18 SDTMEP 1
++ M P
Sbjct: 10560284 TEMMLP 10560267
Score = 83.5 bits (176), Expect(2) = 7e-028
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDA 217
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG A A
Sbjct: 10560316 GPHAYTASKHAIVGLTKNAACELGAHGIRVNCISPFGVATPMLINAWRQGHDASTA 10560483
Score = 64.3 bits (134), Expect(2) = 7e-028
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2 / +1
Query: 206 ADDALKDFLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
+D ++ V G A LKG P D+A+A L+LASD++RY+S NL+VDGG T N
Sbjct: 10560526 SDQEVEKMEEVVRGLATLKGATLRPRDIAEAALFLASDDSRYISGHNLVVDGGVTTSRN 10560702
Score = 40.0 bits (81), Expect(2) = 8e-022
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1 / -1
Query: 373 GCEASVHHEVDRADVPRLVAGQVEHRLGDVLGHGVDALEVGLAAD 239
G +A+V EV +V +VAG+ E RLGDV G ALE G A D
Sbjct: 10560693 GGDAAVDDEVVAGNVSGVVAGEEERRLGDVPGSQRRALERGEAPD 10560559
>ref|NT_107192.1| Oryza sativa (japonica cultivar-group)
Length = 4781381
Score = 87.2 bits (184), Expect(2) = 9e-022
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = -2 / -2
Query: 198 PWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAV*TCGPVPPMALATLA 19
PW + + V T G+ QLTR PW PSS A LVSPT ACL+AV* CGP PP ATLA
Sbjct: 1818802 PWRQALMSIGVATPKGEMQLTRMPWAPSSQAAFLVSPTMACLEAV*ACGPRPPSTPATLA 1818623
Query: 18 SDTMEP 1
++ M P
Sbjct: 1818622 TEMMLP 1818605
Score = 83.5 bits (176), Expect(2) = 7e-028
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +2 / +3
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDA 217
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG A A
Sbjct: 1818654 GPHAYTASKHAIVGLTKNAACELGAHGIRVNCISPFGVATPMLINAWRQGHDASTA 1818821
Score = 64.3 bits (134), Expect(2) = 7e-028
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2 / +3
Query: 206 ADDALKDFLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
+D ++ V G A LKG P D+A+A L+LASD++RY+S NL+VDGG T N
Sbjct: 1818864 SDQEVEKMEEVVRGLATLKGATLRPRDIAEAALFLASDDSRYISGHNLVVDGGVTTSRN 1819040
Score = 40.0 bits (81), Expect(2) = 9e-022
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1 / -1
Query: 373 GCEASVHHEVDRADVPRLVAGQVEHRLGDVLGHGVDALEVGLAAD 239
G +A+V EV +V +VAG+ E RLGDV G ALE G A D
Sbjct: 1819031 GGDAAVDDEVVAGNVSGVVAGEEERRLGDVPGSQRRALERGEAPD 1818897
>gb|AC118668.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0036G02, from chromosome 3, complete sequence
Length = 153308
Score = 87.2 bits (184), Expect(2) = 9e-022
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = -2 / -1
Query: 198 PWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAV*TCGPVPPMALATLA 19
PW + + V T G+ QLTR PW PSS A LVSPT ACL+AV* CGP PP ATLA
Sbjct: 30698 PWRQALMSIGVATPKGEMQLTRMPWAPSSQAAFLVSPTMACLEAV*ACGPRPPSTPATLA 30519
Query: 18 SDTMEP 1
++ M P
Sbjct: 30518 TEMMLP 30501
Score = 83.5 bits (176), Expect(2) = 7e-028
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDA 217
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG A A
Sbjct: 30550 GPHAYTASKHAIVGLTKNAACELGAHGIRVNCISPFGVATPMLINAWRQGHDASTA 30717
Score = 64.3 bits (134), Expect(2) = 7e-028
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2 / +1
Query: 206 ADDALKDFLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
+D ++ V G A LKG P D+A+A L+LASD++RY+S NL+VDGG T N
Sbjct: 30760 SDQEVEKMEEVVRGLATLKGATLRPRDIAEAALFLASDDSRYISGHNLVVDGGVTTSRN 30936
Score = 40.0 bits (81), Expect(2) = 9e-022
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1 / -3
Query: 373 GCEASVHHEVDRADVPRLVAGQVEHRLGDVLGHGVDALEVGLAAD 239
G +A+V EV +V +VAG+ E RLGDV G ALE G A D
Sbjct: 30927 GGDAAVDDEVVAGNVSGVVAGEEERRLGDVPGSQRRALERGEAPD 30793
>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039F10,
complete sequence
Length = 139714
Score = 87.2 bits (184), Expect(2) = 9e-022
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = -2 / -3
Query: 198 PWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAV*TCGPVPPMALATLA 19
PW + + V T G+ QLTR PW PSS A LVSPT ACL+AV* CGP PP ATLA
Sbjct: 131438 PWRQALMSIGVATPKGEMQLTRMPWAPSSQAAFLVSPTMACLEAV*ACGPRPPSTPATLA 131259
Query: 18 SDTMEP 1
++ M P
Sbjct: 131258 TEMMLP 131241
Score = 83.5 bits (176), Expect(2) = 7e-028
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDA 217
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG A A
Sbjct: 131290 GPHAYTASKHAIVGLTKNAACELGAHGIRVNCISPFGVATPMLINAWRQGHDASTA 131457
Score = 64.3 bits (134), Expect(2) = 7e-028
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2 / +1
Query: 206 ADDALKDFLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
+D ++ V G A LKG P D+A+A L+LASD++RY+S NL+VDGG T N
Sbjct: 131500 SDQEVEKMEEVVRGLATLKGATLRPRDIAEAALFLASDDSRYISGHNLVVDGGVTTSRN 131676
Score = 40.0 bits (81), Expect(2) = 9e-022
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1 / -2
Query: 373 GCEASVHHEVDRADVPRLVAGQVEHRLGDVLGHGVDALEVGLAAD 239
G +A+V EV +V +VAG+ E RLGDV G ALE G A D
Sbjct: 131667 GGDAAVDDEVVAGNVSGVVAGEEERRLGDVPGSQRRALERGEAPD 131533
>gb|AACV01006425.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006425, whole
genome shotgun sequence
Length = 21315
Score = 87.2 bits (184), Expect(2) = 9e-022
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = -2 / +3
Query: 198 PWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAV*TCGPVPPMALATLA 19
PW + + V T G+ QLTR PW PSS A LVSPT ACL+AV* CGP PP ATLA
Sbjct: 10419 PWRQALMSIGVATPKGEMQLTRMPWAPSSQAAFLVSPTMACLEAV*ACGPRPPSTPATLA 10598
Query: 18 SDTMEP 1
++ M P
Sbjct: 10599 TEMMLP 10616
Score = 83.5 bits (176), Expect(2) = 7e-028
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +2 / -3
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDA 217
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG A A
Sbjct: 10567 GPHAYTASKHAIVGLTKNAACELGAHGIRVNCISPFGVATPMLINAWRQGHDASTA 10400
Score = 64.3 bits (134), Expect(2) = 7e-028
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2 / -3
Query: 206 ADDALKDFLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
+D ++ V G A LKG P D+A+A L+LASD++RY+S NL+VDGG T N
Sbjct: 10357 SDQEVEKMEEVVRGLATLKGATLRPRDIAEAALFLASDDSRYISGHNLVVDGGVTTSRN 10181
Score = 40.0 bits (81), Expect(2) = 9e-022
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1 / +2
Query: 373 GCEASVHHEVDRADVPRLVAGQVEHRLGDVLGHGVDALEVGLAAD 239
G +A+V EV +V +VAG+ E RLGDV G ALE G A D
Sbjct: 10190 GGDAAVDDEVVAGNVSGVVAGEEERRLGDVPGSQRRALERGEAPD 10324
>dbj|AK100767.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023119K22, full
insert sequence
Length = 1175
Score = 87.2 bits (184), Expect(2) = 1e-021
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = -2 / -2
Query: 198 PWGRCGIDSAVGTA*GDTQLTRTPWRPSSAATLLVSPTTACLDAV*TCGPVPPMALATLA 19
PW + + V T G+ QLTR PW PSS A LVSPT ACL+AV* CGP PP ATLA
Sbjct: 784 PWRQALMSIGVATPKGEMQLTRMPWAPSSQAAFLVSPTMACLEAV*ACGPRPPSTPATLA 605
Query: 18 SDTMEP 1
++ M P
Sbjct: 604 TEMMLP 587
Score = 83.5 bits (176), Expect(2) = 7e-028
Identities = 33/56 (58%), Positives = 40/56 (71%)
Frame = +2 / +3
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDA 217
GPH YTASKHA+VGLTK+ A ELG HG+RVNC+SP+ V T + + QG A A
Sbjct: 636 GPHAYTASKHAIVGLTKNAACELGAHGIRVNCISPFGVATPMLINAWRQGHDASTA 803
Score = 64.3 bits (134), Expect(2) = 7e-028
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +2 / +3
Query: 206 ADDALKDFLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNN 382
+D ++ V G A LKG P D+A+A L+LASD++RY+S NL+VDGG T N
Sbjct: 846 SDQEVEKMEEVVRGLATLKGATLRPRDIAEAALFLASDDSRYISGHNLVVDGGVTTSRN 1022
Score = 40.0 bits (81), Expect(2) = 1e-021
Identities = 22/45 (48%), Positives = 27/45 (60%)
Frame = -1 / -1
Query: 373 GCEASVHHEVDRADVPRLVAGQVEHRLGDVLGHGVDALEVGLAAD 239
G +A+V EV +V +VAG+ E RLGDV G ALE G A D
Sbjct: 1013 GGDAAVDDEVVAGNVSGVVAGEEERRLGDVPGSQRRALERGEAPD 879
>ref|NT_107203.1| Oryza sativa (japonica cultivar-group)
Length = 2359875
Score = 75.3 bits (158), Expect(2) = 5e-023
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2 / -1
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
H YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 51900 HAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 51721
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 51720 NLKGAGALKADD 51685
Score = 71.2 bits (149), Expect(2) = 1e-025
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +2 / -2
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
T H YT SK A+VG T++ A ELGRHG+RVNCVSP AV T L+
Sbjct: 46145 TASHAYTTSKRALVGFTENAAGELGRHGIRVNCVSPAAVATPLA 46014
Score = 68.9 bits (144), Expect(2) = 1e-025
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2 / -2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
A + ANLKGV +D+A A L+LASD+ RYVS NL VDGG + VN++ F D*L
Sbjct: 45971 AIMEKSANLKGVGLKVDDIAAAALFLASDDGRYVSGQNLRVDGGVSVVNSSFGFFRD*L 45795
Score = 56.1 bits (116), Expect(2) = 5e-023
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / -1
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 51690 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 51565
>gb|CH401188.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000025
genomic scaffold, whole genome shotgun sequence
Length = 1620156
Score = 72.1 bits (151), Expect(2) = 5e-022
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2 / -2
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
+ YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 397445 NAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 397266
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 397265 NLKGAGALKADD 397230
Score = 71.2 bits (149), Expect(2) = 1e-025
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +2 / -3
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
T H YT SK A+VG T++ A ELGRHG+RVNCVSP AV T L+
Sbjct: 391690 TASHAYTTSKRALVGFTENAAGELGRHGIRVNCVSPAAVATPLA 391559
Score = 68.9 bits (144), Expect(2) = 1e-025
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2 / -3
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
A + ANLKGV +D+A A L+LASD+ RYVS NL VDGG + VN++ F D*L
Sbjct: 391516 AIMEKSANLKGVGLKVDDIAAAALFLASDDGRYVSGQNLRVDGGVSVVNSSFGFFRD*L 391340
Score = 56.1 bits (116), Expect(2) = 5e-022
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / -2
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 397235 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 397110
>emb|AL662936.4|OSJN00137 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052P16,
complete sequence
Length = 155702
Score = 75.3 bits (158), Expect(2) = 5e-023
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2 / -3
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
H YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 51900 HAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 51721
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 51720 NLKGAGALKADD 51685
Score = 71.2 bits (149), Expect(2) = 1e-025
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +2 / -1
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
T H YT SK A+VG T++ A ELGRHG+RVNCVSP AV T L+
Sbjct: 46145 TASHAYTTSKRALVGFTENAAGELGRHGIRVNCVSPAAVATPLA 46014
Score = 68.9 bits (144), Expect(2) = 1e-025
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2 / -1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
A + ANLKGV +D+A A L+LASD+ RYVS NL VDGG + VN++ F D*L
Sbjct: 45971 AIMEKSANLKGVGLKVDDIAAAALFLASDDGRYVSGQNLRVDGGVSVVNSSFGFFRD*L 45795
Score = 56.1 bits (116), Expect(2) = 5e-023
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / -3
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 51690 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 51565
>emb|AL662933.4|OSJN00145 Oryza sativa (japonica cultivar-group) chromosome 4 clone OSJNBa0096F01,
*** SEQUENCING IN PROGRESS ***, 2 ordered pieces
Length = 145262
Score = 75.3 bits (158), Expect(2) = 5e-023
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2 / -2
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
H YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 139384 HAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 139205
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 139204 NLKGAGALKADD 139169
Score = 71.2 bits (149), Expect(2) = 1e-025
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +2 / -3
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
T H YT SK A+VG T++ A ELGRHG+RVNCVSP AV T L+
Sbjct: 133629 TASHAYTTSKRALVGFTENAAGELGRHGIRVNCVSPAAVATPLA 133498
Score = 68.9 bits (144), Expect(2) = 1e-025
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2 / -3
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
A + ANLKGV +D+A A L+LASD+ RYVS NL VDGG + VN++ F D*L
Sbjct: 133455 AIMEKSANLKGVGLKVDDIAAAALFLASDDGRYVSGQNLRVDGGVSVVNSSFGFFRD*L 133279
Score = 56.1 bits (116), Expect(2) = 5e-023
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / -2
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 139174 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 139049
>gb|AACV01008846.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg008846, whole
genome shotgun sequence
Length = 16376
Score = 72.1 bits (151), Expect(2) = 5e-022
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = +2 / -3
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
+ YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 14220 NAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 14041
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 14040 NLKGAGALKADD 14005
Score = 71.2 bits (149), Expect(2) = 1e-025
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +2 / -1
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
T H YT SK A+VG T++ A ELGRHG+RVNCVSP AV T L+
Sbjct: 8465 TASHAYTTSKRALVGFTENAAGELGRHGIRVNCVSPAAVATPLA 8334
Score = 68.9 bits (144), Expect(2) = 1e-025
Identities = 31/59 (52%), Positives = 39/59 (66%)
Frame = +2 / -1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED*L 409
A + ANLKGV +D+A A L+LASD+ RYVS NL VDGG + VN++ F D*L
Sbjct: 8291 AIMEKSANLKGVGLKVDDIAAAALFLASDDGRYVSGQNLRVDGGVSVVNSSFGFFRD*L 8115
Score = 56.1 bits (116), Expect(2) = 5e-022
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / -3
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 14010 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 13885
>ref|XM_474657.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 825
Score = 71.2 bits (149), Expect(2) = 5e-025
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +2 / +1
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
T H YT SK A+VG T++ A ELGRHG+RVNCVSP AV T L+
Sbjct: 478 TASHAYTTSKRALVGFTENAAGELGRHGIRVNCVSPAAVATPLA 609
Score = 67.0 bits (140), Expect(2) = 5e-025
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +2 / +1
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
A + ANLKGV +D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 652 AIMEKSANLKGVGLKVDDIAAAALFLASDDGRYVSGQNLRVDGGVSVVNSSFGFFRD* 825
>dbj|AK103462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129M10, full
insert sequence
Length = 1265
Score = 75.3 bits (158), Expect(2) = 6e-023
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2 / +1
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
H YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 577 HAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 756
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 757 NLKGAGALKADD 792
Score = 56.1 bits (116), Expect(2) = 6e-023
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / +1
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 787 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 912
>dbj|AK106087.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-B04, full
insert sequence
Length = 1136
Score = 75.3 bits (158), Expect(2) = 6e-023
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2 / +2
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
H YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 575 HAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 754
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 755 NLKGAGALKADD 790
Score = 56.1 bits (116), Expect(2) = 6e-023
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / +2
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 785 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 910
>dbj|AK120852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023N20, full
insert sequence
Length = 1133
Score = 75.3 bits (158), Expect(2) = 6e-023
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2 / +2
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
H YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 572 HAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 751
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 752 NLKGAGALKADD 787
Score = 56.1 bits (116), Expect(2) = 6e-023
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / +2
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 782 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 907
>ref|XM_474658.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 825
Score = 75.3 bits (158), Expect(2) = 6e-023
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +2 / +1
Query: 56 HVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQGARADDALKDFLA 235
H YT SKHA+VG T++ A ELGRHG+RVNCVSP V T L+ + A +A+ A
Sbjct: 490 HAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDEAIEAIMANSA 669
Query: 236 FVGGEANLKGVD 271
+ G LK D
Sbjct: 670 NLKGAGALKADD 705
Score = 56.1 bits (116), Expect(2) = 6e-023
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +2 / +1
Query: 281 EDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
+D+A A L+LASD+ RYVS NL VDGG + VN++ F D*
Sbjct: 700 DDIAAAALFLASDDGRYVSGQNLRVDGGLSVVNSSFGFFRD* 825
>gb|AC150702.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone B1356E08,
complete sequence
Length = 136853
Score = 64.3 bits (134), Expect(3) = 7e-023
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2 / +3
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQ 196
G + Y+ SK AV G ++ AAEL RHGVRVNCVSP+AV T + + Q
Sbjct: 69222 GTYPYSVSKFAVAGAVRAAAAELSRHGVRVNCVSPFAVATPMVVAQFAQ 69368
Score = 61.6 bits (128), Expect(3) = 7e-023
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2 / +3
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTA 373
A V G L+G EDVA+A YLASD+A+YVS NL+VDGGFT+
Sbjct: 69402 AVVRGLGELRGAACEAEDVARAAAYLASDDAKYVSGHNLVVDGGFTS 69542
Score = 22.6 bits (43), Expect(3) = 7e-023
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 1 GLHRVAGQRGQRHRR 45
G+H V G+R +RH R
Sbjct: 69173 GVHPVHGERQRRHGR 69217
>dbj|AK110972.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-174-B12, full
insert sequence
Length = 1284
Score = 64.3 bits (134), Expect(3) = 8e-023
Identities = 26/49 (53%), Positives = 33/49 (67%)
Frame = +2 / +2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALSMPHLPQ 196
G + Y+ SK AV G ++ AAEL RHGVRVNCVSP+AV T + + Q
Sbjct: 722 GTYPYSVSKFAVAGAVRAAAAELSRHGVRVNCVSPFAVATPMVVAQFAQ 868
Score = 61.6 bits (128), Expect(3) = 8e-023
Identities = 27/47 (57%), Positives = 33/47 (70%)
Frame = +2 / +2
Query: 233 AFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTA 373
A V G L+G EDVA+A YLASD+A+YVS NL+VDGGFT+
Sbjct: 902 AVVRGLGELRGAACEAEDVARAAAYLASDDAKYVSGHNLVVDGGFTS 1042
Score = 22.6 bits (43), Expect(3) = 8e-023
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 1 GLHRVAGQRGQRHRR 45
G+H V G+R +RH R
Sbjct: 673 GVHPVHGERQRRHGR 717
>ref|NT_079914.2| Oryza sativa (japonica cultivar-group)
Length = 1404373
Score = 75.8 bits (159), Expect(2) = 9e-022
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / +2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
GP YTASKHAV+GL ++ A ELGRHGVRVNCVSP V T LS
Sbjct: 1358 GPAAYTASKHAVLGLVRAAAGELGRHGVRVNCVSPGGVATPLS 1486
Score = 51.5 bits (106), Expect(2) = 9e-022
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2 / +2
Query: 257 LKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVN 379
L+G DVA+A+L+LASD+A +VS NL+VDG TAVN
Sbjct: 1547 LRGKVLKAADVAEAMLFLASDQAAFVSGHNLVVDGATTAVN 1669
>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
sequence
Length = 164352
Score = 75.8 bits (159), Expect(2) = 9e-022
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / -2
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
GP YTASKHAV+GL ++ A ELGRHGVRVNCVSP V T LS
Sbjct: 162995 GPAAYTASKHAVLGLVRAAAGELGRHGVRVNCVSPGGVATPLS 162867
Score = 51.5 bits (106), Expect(2) = 9e-022
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2 / -2
Query: 257 LKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVN 379
L+G DVA+A+L+LASD+A +VS NL+VDG TAVN
Sbjct: 162806 LRGKVLKAADVAEAMLFLASDQAAFVSGHNLVVDGATTAVN 162684
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete
sequence
Length = 164236
Score = 75.8 bits (159), Expect(2) = 9e-022
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
GP YTASKHAV+GL ++ A ELGRHGVRVNCVSP V T LS
Sbjct: 157372 GPAAYTASKHAVLGLVRAAAGELGRHGVRVNCVSPGGVATPLS 157500
Score = 51.5 bits (106), Expect(2) = 9e-022
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 257 LKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVN 379
L+G DVA+A+L+LASD+A +VS NL+VDG TAVN
Sbjct: 157561 LRGKVLKAADVAEAMLFLASDQAAFVSGHNLVVDGATTAVN 157683
>ref|XM_470312.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1369
Score = 75.8 bits (159), Expect(2) = 1e-021
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
GP YTASKHAV+GL ++ A ELGRHGVRVNCVSP V T LS
Sbjct: 814 GPAAYTASKHAVLGLVRAAAGELGRHGVRVNCVSPGGVATPLS 942
Score = 51.5 bits (106), Expect(2) = 1e-021
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 257 LKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVN 379
L+G DVA+A+L+LASD+A +VS NL+VDG TAVN
Sbjct: 1003 LRGKVLKAADVAEAMLFLASDQAAFVSGHNLVVDGATTAVN 1125
>dbj|AK068662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161B14, full
insert sequence
Length = 1042
Score = 75.8 bits (159), Expect(2) = 1e-021
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
GP YTASKHAV+GL ++ A ELGRHGVRVNCVSP V T LS
Sbjct: 487 GPAAYTASKHAVLGLVRAAAGELGRHGVRVNCVSPGGVATPLS 615
Score = 51.5 bits (106), Expect(2) = 1e-021
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 257 LKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVN 379
L+G DVA+A+L+LASD+A +VS NL+VDG TAVN
Sbjct: 676 LRGKVLKAADVAEAMLFLASDQAAFVSGHNLVVDGATTAVN 798
>ref|XM_470168.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 783
Score = 75.8 bits (159), Expect(2) = 1e-021
Identities = 31/43 (72%), Positives = 34/43 (79%)
Frame = +2 / +1
Query: 50 GPHVYTASKHAVVGLTKSVAAELGRHGVRVNCVSPYAVPTALS 178
GP YTASKHAV+GL ++ A ELGRHGVRVNCVSP V T LS
Sbjct: 442 GPAAYTASKHAVLGLVRAAAGELGRHGVRVNCVSPGGVATPLS 570
Score = 51.5 bits (106), Expect(2) = 1e-021
Identities = 23/41 (56%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 257 LKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVN 379
L+G DVA+A+L+LASD+A +VS NL+VDG TAVN
Sbjct: 631 LRGKVLKAADVAEAMLFLASDQAAFVSGHNLVVDGATTAVN 753
>gb|CH401189.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000026 genomic
scaffold, whole genome shotgun sequence
Length = 11796637
Score = 71.2 bits (149), Expect(2) = 6e-021
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +2 / -2
Query: 227 FLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
F A + ANLKGV ED+A AVL+LASD+ARYVS NL++DGG + VN + F+D*
Sbjct: 9867171 FEAAMEAVANLKGVRLRVEDIAAAVLFLASDDARYVSGHNLLIDGGCSIVNPSFGIFKD* 9866992
Score = 53.3 bits (110), Expect(2) = 6e-021
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / -3
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRV 139
T H YT +K A+VGLT++ AAELGRHG+RV
Sbjct: 9867335 TASHAYTCAKRALVGLTENAAAELGRHGIRV 9867243
>gb|AACV01009681.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg009681, whole
genome shotgun sequence
Length = 29302
Score = 71.2 bits (149), Expect(2) = 6e-021
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +2 / -3
Query: 227 FLAFVGGEANLKGVDAMPEDVAQAVLYLASDEARYVSAVNLMVDGGFTAVNNNLRAFED* 406
F A + ANLKGV ED+A AVL+LASD+ARYVS NL++DGG + VN + F+D*
Sbjct: 17819 FEAAMEAVANLKGVRLRVEDIAAAVLFLASDDARYVSGHNLLIDGGCSIVNPSFGIFKD* 17640
Score = 53.3 bits (110), Expect(2) = 6e-021
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +2 / -1
Query: 47 TGPHVYTASKHAVVGLTKSVAAELGRHGVRV 139
T H YT +K A+VGLT++ AAELGRHG+RV
Sbjct: 17983 TASHAYTCAKRALVGLTENAAAELGRHGIRV 17891
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,457,202,953
Number of Sequences: 438736
Number of extensions: 46550558
Number of successful extensions: 592365
Number of sequences better than 1.0e-020: 55
length of database: 933,473,305
effective HSP length: 59
effective length of database: 907,587,881
effective search space used: 142491297317
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)