TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591194.2.1
(591 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK071465.1| Oryza sativa (japonica cultivar-group) cDNA... 201 6e-050
gb|AQ160819.1|AQ160819 nbxb0006E03r CUGI Rice BAC Library O... 188 5e-046
gb|AQ273678.1|AQ273678 nbxb0030P13f CUGI Rice BAC Library O... 188 5e-046
ref|NT_107233.1| Oryza sativa (japonica cultivar-group) 188 5e-046
dbj|AP003723.3| Oryza sativa (japonica cultivar-group) geno... 188 5e-046
dbj|AP003728.3| Oryza sativa (japonica cultivar-group) geno... 188 5e-046
gb|AACV01014794.1| Oryza sativa (japonica cultivar-group) c... 188 5e-046
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 188 5e-046
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 188 5e-046
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 188 5e-046
ref|XM_478354.1| Oryza sativa (japonica cultivar-group), mRNA 176 2e-042
gb|AACV01016348.1| Oryza sativa (japonica cultivar-group) c... 163 1e-038
dbj|AP005185.4| Oryza sativa (japonica cultivar-group) geno... 163 1e-038
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 163 1e-038
gb|CH401226.1| Oryza sativa (japonica cultivar-group) chrom... 163 1e-038
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 163 1e-038
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 163 1e-038
dbj|AK070790.1| Oryza sativa (japonica cultivar-group) cDNA... 134 9e-030
dbj|AK071517.1| Oryza sativa (japonica cultivar-group) cDNA... 134 9e-030
ref|XM_473496.1| Oryza sativa (japonica cultivar-group), p... 134 9e-030
gb|AACV01010279.1| Oryza sativa (japonica cultivar-group) c... 126 2e-027
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 126 2e-027
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 126 2e-027
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 126 2e-027
emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromoso... 126 2e-027
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 126 2e-027
gb|AQ843693.1|AQ843693 nbxb0024N22r CUGI Rice BAC Library O... 116 3e-027
gb|AU101619.1|AU101619 AU101619 Rice root Oryza sativa (jap... 117 1e-024
dbj|AK102922.1| Oryza sativa (japonica cultivar-group) cDNA... 117 1e-024
ref|XM_476421.1| Oryza sativa (japonica cultivar-group), mRNA 117 1e-024
gb|AC093952.2| Oryza sativa (japonica cultivar-group) chrom... 111 5e-023
gb|AC118289.2| Oryza sativa (japonica cultivar-group) chrom... 111 5e-023
ref|XM_475449.1| Oryza sativa (japonica cultivar-group), p... 111 5e-023
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 111 5e-023
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 111 5e-023
gb|AU101215.1|AU101215 AU101215 Rice panicle at flowering s... 111 9e-023
dbj|AP004262.2| Oryza sativa (japonica cultivar-group) geno... 108 5e-022
gb|AACV01015064.1| Oryza sativa (japonica cultivar-group) c... 108 5e-022
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 108 5e-022
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 108 5e-022
dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-021
gb|AACV01002567.1| Oryza sativa (japonica cultivar-group) c... 107 1e-021
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 107 1e-021
ref|NM_191079.1| Oryza sativa (japonica cultivar-group), p... 107 1e-021
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 107 1e-021
dbj|AP003255.3| Oryza sativa (japonica cultivar-group) geno... 107 1e-021
dbj|AP003411.4| Oryza sativa (japonica cultivar-group) geno... 107 1e-021
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 107 1e-021
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 107 1e-021
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 107 1e-021
gb|AQ954565.1|AQ954565 nbeb0071M11r CUGI Rice BAC Library (... 106 2e-021
>dbj|AK071465.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098E17, full
insert sequence
Length = 1954
Score = 201 bits (433), Expect = 6e-050
Identities = 79/83 (95%), Positives = 83/83 (100%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A+ARYTLQVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENP
Sbjct: 1421 DAVARYTLQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENP 1600
Query: 402 IPKNALLCGRASGRRTRPL*S*I 334
IPKNALLCGRASGRRTRPL*+*I
Sbjct: 1601 IPKNALLCGRASGRRTRPL*T*I 1669
Score = 183 bits (395), Expect = 1e-044
Identities = 77/84 (91%), Positives = 78/84 (92%)
Frame = +2 / -2
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 1674 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 1495
Query: 509 TLSSGM*IAVHD*GYTCNVYRAMA 580
TLS GM*IAVHD*GYTCNVYRA A
Sbjct: 1494 TLSKGM*IAVHD*GYTCNVYRATA 1423
>gb|AQ160819.1|AQ160819 nbxb0006E03r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0006E03r, DNA sequence
Length = 753
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / -3
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 343 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 164
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 163 LLCGRASGRRTRPL*T*I 110
Score = 166 bits (357), Expect(2) = 1e-040
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +3
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 105 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 284
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 285 TLSKGM*IAVHD*GYT 332
Score = 25.8 bits (50), Expect(2) = 1e-040
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 551 YTCNVYRAMA 580
YTCNVYRA A
Sbjct: 504 YTCNVYRATA 533
>gb|AQ273678.1|AQ273678 nbxb0030P13f CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0030P13f, DNA sequence
Length = 598
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / -1
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 343 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 164
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 163 LLCGRASGRRTRPL*T*I 110
Score = 166 bits (357), Expect(2) = 9e-041
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +3
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 105 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 284
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 285 TLSKGM*IAVHD*GYT 332
Score = 25.8 bits (50), Expect(2) = 9e-041
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 551 YTCNVYRAMA 580
YTCNVYRA A
Sbjct: 504 YTCNVYRATA 533
>ref|NT_107233.1| Oryza sativa (japonica cultivar-group)
Length = 6315341
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / -3
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 5316810 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 5316631
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 5316630 LLCGRASGRRTRPL*T*I 5316577
Score = 166 bits (357), Expect = 2e-039
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +2
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 5316572 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 5316751
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 5316752 TLSKGM*IAVHD*GYT 5316799
>dbj|AP003723.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0003H08
Length = 142068
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / -3
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 5248 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 5069
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 5068 LLCGRASGRRTRPL*T*I 5015
Score = 166 bits (357), Expect = 2e-039
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +3
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 5010 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 5189
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 5190 TLSKGM*IAVHD*GYT 5237
>dbj|AP003728.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0710B08
Length = 186991
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / -2
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 153834 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 153655
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 153654 LLCGRASGRRTRPL*T*I 153601
Score = 166 bits (357), Expect = 2e-039
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +2
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 153596 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 153775
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 153776 TLSKGM*IAVHD*GYT 153823
>gb|AACV01014794.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014794, whole
genome shotgun sequence
Length = 29916
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / +2
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 3410 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 3589
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 3590 LLCGRASGRRTRPL*T*I 3643
Score = 166 bits (357), Expect = 2e-039
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / -1
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 3648 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 3469
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 3468 TLSKGM*IAVHD*GYT 3421
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / -1
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 9258215 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 9258036
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 9258035 LLCGRASGRRTRPL*T*I 9257982
Score = 166 bits (357), Expect = 2e-039
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +1
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 9257977 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 9258156
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 9258157 TLSKGM*IAVHD*GYT 9258204
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / -3
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 26956952 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 26956773
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 26956772 LLCGRASGRRTRPL*T*I 26956719
Score = 166 bits (357), Expect = 2e-039
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +1
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 26956714 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 26956893
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 26956894 TLSKGM*IAVHD*GYT 26956941
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 188 bits (405), Expect = 5e-046
Identities = 74/78 (94%), Positives = 76/78 (97%)
Frame = -1 / -1
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 388
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA
Sbjct: 27851325 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNA 27851146
Query: 387 LLCGRASGRRTRPL*S*I 334
LLCGRASGRRTRPL*+*I
Sbjct: 27851145 LLCGRASGRRTRPL*T*I 27851092
Score = 166 bits (357), Expect = 2e-039
Identities = 70/76 (92%), Positives = 71/76 (93%)
Frame = +2 / +2
Query: 329 SGIQLQRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIP 508
S IQ+QRGLVRRPEARPQ SAF GIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDL FHIP
Sbjct: 27851087 SPIQVQRGLVRRPEARPQRSAFFGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLMFHIP 27851266
Query: 509 TLSSGM*IAVHD*GYT 556
TLS GM*IAVHD*GYT
Sbjct: 27851267 TLSKGM*IAVHD*GYT 27851314
>ref|XM_478354.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1692
Score = 176 bits (378), Expect = 2e-042
Identities = 67/80 (83%), Positives = 76/80 (95%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++RYT+QVYP SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++ + SWRDE P
Sbjct: 1453 DAVSRYTVQVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYP 1632
Query: 402 IPKNALLCGRASGRRTRPL* 343
IPKNALLCGRA+GRRTRPL*
Sbjct: 1633 IPKNALLCGRAAGRRTRPL* 1692
Score = 122 bits (260), Expect = 5e-026
Identities = 54/79 (68%), Positives = 60/79 (75%)
Frame = +2 / -2
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q G VRRP ARPQ AFLG+G+SSRH+ TRR*NC PRYCLAQ SD TFH+PTLS+G
Sbjct: 1691 QSGRVRRPAARPQRRAFLGMGYSSRHDVDDVQTRR*NCCPRYCLAQFSDRTFHMPTLSNG 1512
Query: 524 M*IAVHD*GYTCNVYRAMA 580
M*IAVH+ G T VYR A
Sbjct: 1511 M*IAVHELG*T*TVYRETA 1455
>gb|AACV01016348.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg016348,
whole genome shotgun sequence
Length = 5078
Score = 163 bits (351), Expect = 1e-038
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = -1 / -1
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++ + SWRDE PIPKNALLC
Sbjct: 452 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 273
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 272 GRAAGRRTRPL* 237
Score = 115 bits (246), Expect = 4e-024
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +2 / +1
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q G VRRP ARPQ AFLG+G+SSRH+ TRR*NC PRYCLAQ SD TFH+PTLS+G
Sbjct: 238 QSGRVRRPAARPQRRAFLGMGYSSRHDVDDVQTRR*NCCPRYCLAQFSDRTFHMPTLSNG 417
Query: 524 M*IAVHD*GYT 556
M*IAVH+ G T
Sbjct: 418 M*IAVHELG*T 450
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0409B11
Length = 168354
Score = 163 bits (351), Expect = 1e-038
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = -1 / +3
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++ + SWRDE PIPKNALLC
Sbjct: 134280 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 134459
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 134460 GRAAGRRTRPL* 134495
Score = 115 bits (246), Expect = 4e-024
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +2 / -3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q G VRRP ARPQ AFLG+G+SSRH+ TRR*NC PRYCLAQ SD TFH+PTLS+G
Sbjct: 134494 QSGRVRRPAARPQRRAFLGMGYSSRHDVDDVQTRR*NCCPRYCLAQFSDRTFHMPTLSNG 134315
Query: 524 M*IAVHD*GYT 556
M*IAVH+ G T
Sbjct: 134314 M*IAVHELG*T 134282
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 163 bits (351), Expect = 1e-038
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = -1 / +3
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++ + SWRDE PIPKNALLC
Sbjct: 7067817 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 7067996
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 7067997 GRAAGRRTRPL* 7068032
Score = 115 bits (246), Expect = 4e-024
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +2 / -3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q G VRRP ARPQ AFLG+G+SSRH+ TRR*NC PRYCLAQ SD TFH+PTLS+G
Sbjct: 7068031 QSGRVRRPAARPQRRAFLGMGYSSRHDVDDVQTRR*NCCPRYCLAQFSDRTFHMPTLSNG 7067852
Query: 524 M*IAVHD*GYT 556
M*IAVH+ G T
Sbjct: 7067851 M*IAVHELG*T 7067819
>gb|CH401226.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000063 genomic
scaffold, whole genome shotgun sequence
Length = 15204090
Score = 163 bits (351), Expect = 1e-038
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = -1 / +3
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++ + SWRDE PIPKNALLC
Sbjct: 4997526 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 4997705
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 4997706 GRAAGRRTRPL* 4997741
Score = 115 bits (246), Expect = 4e-024
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +2 / -3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q G VRRP ARPQ AFLG+G+SSRH+ TRR*NC PRYCLAQ SD TFH+PTLS+G
Sbjct: 4997740 QSGRVRRPAARPQRRAFLGMGYSSRHDVDDVQTRR*NCCPRYCLAQFSDRTFHMPTLSNG 4997561
Query: 524 M*IAVHD*GYT 556
M*IAVH+ G T
Sbjct: 4997560 M*IAVHELG*T 4997528
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 163 bits (351), Expect = 1e-038
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = -1 / +2
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++ + SWRDE PIPKNALLC
Sbjct: 18396965 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 18397144
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 18397145 GRAAGRRTRPL* 18397180
Score = 115 bits (246), Expect = 4e-024
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +2 / -3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q G VRRP ARPQ AFLG+G+SSRH+ TRR*NC PRYCLAQ SD TFH+PTLS+G
Sbjct: 18397179 QSGRVRRPAARPQRRAFLGMGYSSRHDVDDVQTRR*NCCPRYCLAQFSDRTFHMPTLSNG 18397000
Query: 524 M*IAVHD*GYT 556
M*IAVH+ G T
Sbjct: 18396999 M*IAVHELG*T 18396967
Score = 108 bits (231), Expect = 5e-022
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -1 / +1
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E IP NA+LC
Sbjct: 1099345 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 1099524
Query: 378 GRASG 364
GRA+G
Sbjct: 1099525 GRAAG 1099539
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 163 bits (351), Expect = 1e-038
Identities = 63/72 (87%), Positives = 68/72 (94%)
Frame = -1 / +2
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP SWTAIYMPLDNVGMWNVRSE+WARQYLGQQFYLRV++ + SWRDE PIPKNALLC
Sbjct: 19444742 QVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLC 19444921
Query: 378 GRASGRRTRPL* 343
GRA+GRRTRPL*
Sbjct: 19444922 GRAAGRRTRPL* 19444957
Score = 115 bits (246), Expect = 4e-024
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +2 / -3
Query: 344 QRGLVRRPEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSG 523
Q G VRRP ARPQ AFLG+G+SSRH+ TRR*NC PRYCLAQ SD TFH+PTLS+G
Sbjct: 19444956 QSGRVRRPAARPQRRAFLGMGYSSRHDVDDVQTRR*NCCPRYCLAQFSDRTFHMPTLSNG 19444777
Query: 524 M*IAVHD*GYT 556
M*IAVH+ G T
Sbjct: 19444776 M*IAVHELG*T 19444744
Score = 108 bits (231), Expect = 5e-022
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -1 / +1
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E IP NA+LC
Sbjct: 1056616 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 1056795
Query: 378 GRASG 364
GRA+G
Sbjct: 1056796 GRAAG 1056810
>dbj|AK070790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023067H20, full
insert sequence
Length = 2016
Score = 134 bits (287), Expect = 9e-030
Identities = 50/77 (64%), Positives = 65/77 (84%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE P
Sbjct: 1495 DAVSRCTVQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELP 1674
Query: 402 IPKNALLCGRASGRRTR 352
IP NAL CGRA+ R
Sbjct: 1675 IPSNALRCGRATNASGR 1725
>dbj|AK071517.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100A14, full
insert sequence
Length = 1977
Score = 134 bits (287), Expect = 9e-030
Identities = 50/77 (64%), Positives = 65/77 (84%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE P
Sbjct: 1502 DAVSRCTVQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELP 1681
Query: 402 IPKNALLCGRASGRRTR 352
IP NAL CGRA+ R
Sbjct: 1682 IPSNALRCGRATNASGR 1732
>ref|XM_473496.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1665
Score = 134 bits (287), Expect = 9e-030
Identities = 50/77 (64%), Positives = 65/77 (84%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A++R T+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE P
Sbjct: 1411 DAVSRCTVQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELP 1590
Query: 402 IPKNALLCGRASGRRTR 352
IP NAL CGRA+ R
Sbjct: 1591 IPSNALRCGRATNASGR 1641
>gb|AACV01010279.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010279, whole
genome shotgun sequence
Length = 16074
Score = 126 bits (270), Expect = 2e-027
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -1 / -3
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE PIP NAL
Sbjct: 12076 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 11897
Query: 381 CGRASGRRTR 352
CGRA+ R
Sbjct: 11896 CGRATNASGR 11867
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 126 bits (270), Expect = 2e-027
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -1 / -3
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE PIP NAL
Sbjct: 1877446 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 1877267
Query: 381 CGRASGRRTR 352
CGRA+ R
Sbjct: 1877266 CGRATNASGR 1877237
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 126 bits (270), Expect = 2e-027
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -1 / -1
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE PIP NAL
Sbjct: 5904102 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 5903923
Query: 381 CGRASGRRTR 352
CGRA+ R
Sbjct: 5903922 CGRATNASGR 5903893
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 126 bits (270), Expect = 2e-027
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -1 / -1
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE PIP NAL
Sbjct: 25048201 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 25048022
Query: 381 CGRASGRRTR 352
CGRA+ R
Sbjct: 25048021 CGRATNASGR 25047992
>emb|AL606687.3|OSJN00087 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K11,
complete sequence
Length = 147806
Score = 126 bits (270), Expect = 2e-027
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -1 / -1
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE PIP NAL
Sbjct: 108020 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 107841
Query: 381 CGRASGRRTR 352
CGRA+ R
Sbjct: 107840 CGRATNASGR 107811
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 126 bits (270), Expect = 2e-027
Identities = 47/70 (67%), Positives = 59/70 (84%)
Frame = -1 / -2
Query: 561 LQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALL 382
+QVYP++WTA+ + LDNVGMWN+RSE WAR+Y GQQFYLRVY+P++S+RDE PIP NAL
Sbjct: 28100795 VQVYPRAWTAVLVALDNVGMWNLRSEDWARRYQGQQFYLRVYTPSHSFRDELPIPSNALR 28100616
Query: 381 CGRASGRRTR 352
CGRA+ R
Sbjct: 28100615 CGRATNASGR 28100586
>gb|AQ843693.1|AQ843693 nbxb0024N22r CUGI Rice BAC Library Oryza sativa (japonica
cultivar-group) genomic clone nbxb0024N22r, DNA sequence
Length = 636
Score = 116 bits (247), Expect(2) = 3e-027
Identities = 45/58 (77%), Positives = 46/58 (79%)
Frame = -1 / -2
Query: 567 YTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPK 394
Y QVYPQSWTAIYMPLDNVGMWN+RSESWARQYLGQQFYLRVYS P PK
Sbjct: 389 YFFQVYPQSWTAIYMPLDNVGMWNIRSESWARQYLGQQFYLRVYSRGELMAGREPDPK 216
Score = 96.4 bits (204), Expect(3) = 5e-025
Identities = 43/64 (67%), Positives = 45/64 (70%)
Frame = +2 / +1
Query: 365 PEARPQSSAFLGIGFSSRHEFAGE*TRR*NCWPRYCLAQLSDLTFHIPTLSSGM*IAVHD 544
P + + LG G E*TRR*NCWPRYCLAQLSDL FHIPTLS GM*IAVHD
Sbjct: 187 PRPDRRGARSLGSGSRPAMSSPRE*TRR*NCWPRYCLAQLSDLMFHIPTLSKGM*IAVHD 366
Query: 545 *GYT 556
*GYT
Sbjct: 367 *GYT 378
Score = 35.4 bits (71), Expect(3) = 5e-025
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +1 / +2
Query: 334 DSASERPGPASRGPAAEQ 387
+S SERPGPA RGP AE+
Sbjct: 155 NSGSERPGPAPRGPTAEE 208
Score = 29.5 bits (58), Expect(2) = 3e-027
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 383 SAAGPLDAGPGLSEAE 336
SA GP AGPGLSE E
Sbjct: 204 SAVGPRGAGPGLSEPE 157
Score = 25.8 bits (50), Expect(3) = 5e-025
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 551 YTCNVYRAMA 580
YTCNVYRA A
Sbjct: 551 YTCNVYRATA 580
>gb|AU101619.1|AU101619 AU101619 Rice root Oryza sativa (japonica cultivar-group) cDNA
clone R0531, mRNA sequence
Length = 699
Score = 117 bits (250), Expect = 1e-024
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A AR+T+QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E
Sbjct: 166 DAQARHTVQVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYS 345
Query: 402 IPKNALLCGRASG 364
IP NA+LCGRA+G
Sbjct: 346 IPTNAILCGRAAG 384
>dbj|AK102922.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114C13, full
insert sequence
Length = 1967
Score = 117 bits (250), Expect = 1e-024
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A AR+T+QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E
Sbjct: 1432 DAQARHTVQVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYS 1611
Query: 402 IPKNALLCGRASG 364
IP NA+LCGRA+G
Sbjct: 1612 IPTNAILCGRAAG 1650
>ref|XM_476421.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1968
Score = 117 bits (250), Expect = 1e-024
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+A AR+T+QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E
Sbjct: 1433 DAQARHTVQVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYS 1612
Query: 402 IPKNALLCGRASG 364
IP NA+LCGRA+G
Sbjct: 1613 IPTNAILCGRAAG 1651
>gb|AC093952.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1004_E02,
complete sequence
Length = 127642
Score = 111 bits (238), Expect = 5e-023
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+++QVYP+SWTAI + DN GMWNVRS W R YLG+Q Y+ V SPA S RDE
Sbjct: 19586 DGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARSLRDEYN 19407
Query: 402 IPKNALLCGRASG 364
+P+NAL CG+ G
Sbjct: 19406 MPENALRCGKVVG 19368
>gb|AC118289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0099O15,
complete sequence
Length = 137357
Score = 111 bits (238), Expect = 5e-023
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = -1 / -3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+++QVYP+SWTAI + DN GMWNVRS W R YLG+Q Y+ V SPA S RDE
Sbjct: 128718 DGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARSLRDEYN 128539
Query: 402 IPKNALLCGRASG 364
+P+NAL CG+ G
Sbjct: 128538 MPENALRCGKVVG 128500
>ref|XM_475449.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1671
Score = 111 bits (238), Expect = 5e-023
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+++QVYP+SWTAI + DN GMWNVRS W R YLG+Q Y+ V SPA S RDE
Sbjct: 1420 DGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARSLRDEYN 1599
Query: 402 IPKNALLCGRASG 364
+P+NAL CG+ G
Sbjct: 1600 MPENALRCGKVVG 1638
>ref|NT_107214.1| Oryza sativa (japonica cultivar-group)
Length = 1031295
Score = 111 bits (238), Expect = 5e-023
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+++QVYP+SWTAI + DN GMWNVRS W R YLG+Q Y+ V SPA S RDE
Sbjct: 128718 DGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARSLRDEYN 128539
Query: 402 IPKNALLCGRASG 364
+P+NAL CG+ G
Sbjct: 128538 MPENALRCGKVVG 128500
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 111 bits (238), Expect = 5e-023
Identities = 41/73 (56%), Positives = 54/73 (73%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+++QVYP+SWTAI + DN GMWNVRS W R YLG+Q Y+ V SPA S RDE
Sbjct: 23738765 DGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARSLRDEYN 23738586
Query: 402 IPKNALLCGRASG 364
+P+NAL CG+ G
Sbjct: 23738585 MPENALRCGKVVG 23738547
>gb|AU101215.1|AU101215 AU101215 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E2633, mRNA sequence
Length = 434
Score = 111 bits (236), Expect = 9e-023
Identities = 41/73 (56%), Positives = 53/73 (72%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+++QVYP+SWTAI + DN GMWNVRS W R YLG+Q Y+ V SPA S RDE
Sbjct: 2 DGVSRHSVQVYPRSWTAIMLTFDNAGMWNVRSNIWERHYLGEQLYISVVSPARSLRDEYN 181
Query: 402 IPKNALLCGRASG 364
P+NAL CG+ G
Sbjct: 182 XPENALRCGKVVG 220
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0022B05
Length = 151317
Score = 108 bits (231), Expect = 5e-022
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -1 / +3
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E IP NA+LC
Sbjct: 54204 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 54383
Query: 378 GRASG 364
GRA+G
Sbjct: 54384 GRAAG 54398
>gb|AACV01015064.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015064, whole
genome shotgun sequence
Length = 187699
Score = 108 bits (231), Expect = 5e-022
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -1 / +2
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E IP NA+LC
Sbjct: 123755 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 123934
Query: 378 GRASG 364
GRA+G
Sbjct: 123935 GRAAG 123949
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 108 bits (231), Expect = 5e-022
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -1 / +1
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E IP NA+LC
Sbjct: 1050553 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 1050732
Query: 378 GRASG 364
GRA+G
Sbjct: 1050733 GRAAG 1050747
>gb|CH401218.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000055 genomic
scaffold, whole genome shotgun sequence
Length = 1431804
Score = 108 bits (231), Expect = 5e-022
Identities = 40/65 (61%), Positives = 51/65 (78%)
Frame = -1 / +1
Query: 558 QVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENPIPKNALLC 379
QVYP W+AI + LDN GMWN+RS +W RQYLGQQ Y+RV++P S+ +E IP NA+LC
Sbjct: 1099345 QVYPNGWSAILVSLDNQGMWNLRSANWDRQYLGQQLYMRVWTPQQSFSNEYSIPTNAILC 1099524
Query: 378 GRASG 364
GRA+G
Sbjct: 1099525 GRAAG 1099539
>dbj|AK100654.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111E13, full
insert sequence
Length = 2451
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 1595 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 1774
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 1775 MPEIALRCGKVVG 1813
>gb|AACV01002567.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002567, whole
genome shotgun sequence
Length = 43694
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / -1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 2696 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 2517
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 2516 MPEIALRCGKVVG 2478
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 34822587 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 34822766
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 34822767 MPEIALRCGKVVG 34822805
>ref|NM_191079.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1662
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 1411 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 1590
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 1591 MPEIALRCGKVVG 1629
>ref|NT_079927.2| Oryza sativa (japonica cultivar-group)
Length = 14818989
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 9269970 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 9270149
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 9270150 MPEIALRCGKVVG 9270188
>dbj|AP003255.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0454H12
Length = 161004
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 1089 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 1268
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 1269 MPEIALRCGKVVG 1307
>dbj|AP003411.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1148D12
Length = 132060
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 57157 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 57336
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 57337 MPEIALRCGKVVG 57375
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +2
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 9090719 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 9090898
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 9090899 MPEIALRCGKVVG 9090937
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +1
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 34292440 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 34292619
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 34292620 MPEIALRCGKVVG 34292658
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 107 bits (228), Expect = 1e-021
Identities = 39/73 (53%), Positives = 52/73 (71%)
Frame = -1 / +3
Query: 582 NAIARYTLQVYPQSWTAIYMPLDNVGMWNVRSESWARQYLGQQFYLRVYSPANSWRDENP 403
+ ++R+T+QVYP+SWTA+ + DN GMWN+RS W R YLG Q Y+ V SPA S RDE
Sbjct: 34741917 DTVSRHTIQVYPRSWTAVMLTFDNAGMWNIRSNMWERYYLGAQLYVSVVSPARSLRDEYN 34742096
Query: 402 IPKNALLCGRASG 364
+P+ AL CG+ G
Sbjct: 34742097 MPEIALRCGKVVG 34742135
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 3,195,739,322
Number of Sequences: 438736
Number of extensions: 41620410
Number of successful extensions: 225025
Number of sequences better than 1.0e-020: 71
length of database: 933,473,305
effective HSP length: 58
effective length of database: 908,026,617
effective search space used: 125307673146
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)