TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 44956.2.1
(1252 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK122708.1|CK122708 BES1824105i15 BES1824 Hordeum vulgar... 430 e-120
gb|AV913625.1|AV913625 AV913625 K. Sato unpublished cDNA li... 407 e-113
gb|BM097231.2|BM097231 EBpi07_SQ002_N01_R pistil, 12 DPA, n... 343 1e-093
gb|AL505428.1|AL505428 AL505428 Hordeum vulgare Barke roots... 334 8e-091
gb|AL503431.1|AL503431 AL503431 Hordeum vulgare Barke roots... 311 1e-089
gb|CA012350.1|CA012350 HT05C23r HT Hordeum vulgare subsp. v... 324 6e-088
gb|CV054090.1|CV054090 BNEL106f2 Barley EST endosperm libra... 308 4e-084
gb|AV918929.1|AV918929 AV918929 K. Sato unpublished cDNA li... 270 9e-080
gb|BG417399.2|BG417399 HVSMEk0017D09f Hordeum vulgare testa... 281 3e-076
gb|BI954147.1|BI954147 HVSMEm0016G03f Hordeum vulgare green... 273 2e-075
gb|BI958890.1|BI958890 HVSMEn0017A21f Hordeum vulgare rachi... 265 4e-070
gb|AL502696.1|AL502696 AL502696 Hordeum vulgare Barke roots... 259 3e-068
gb|CA011564.1|CA011564 HT05C23u HT Hordeum vulgare subsp. v... 250 1e-065
gb|BF263367.2|BF263367 HV_CEa0006I24f Hordeum vulgare seedl... 236 2e-061
gb|CA023895.1|CA023895 HZ47L19r HZ Hordeum vulgare subsp. v... 225 5e-058
gb|CK125619.1|CK125619 BES1824109e02 BES1824 Hordeum vulgar... 154 3e-054
gb|AL500851.1|AL500851 AL500851 Hordeum vulgare Barke roots... 200 3e-051
gb|AJ460556.1|AJ460556 AJ460556 S00002 Hordeum vulgare subs... 133 1e-030
gb|BQ768195.1|BQ768195 EBro08_SQ011_A05 _R root, 3 week, dr... 73 5e-028
gb|AJ433965.1|AJ433965 AJ433965 S00002 Hordeum vulgare subs... 125 6e-028
gb|BF065145.2|BF065145 HV_CEb0023I02f Hordeum vulgare seedl... 116 3e-025
gb|BQ755185.1|BQ755185 EBed02_SQ003_P18_R endosperm, 8 DPA,... 102 9e-024
gb|BJ474443.1|BJ474443 BJ474443 K. Sato unpublished cDNA li... 90 2e-021
gb|BJ475210.1|BJ475210 BJ475210 K. Sato unpublished cDNA li... 90 2e-021
>gb|CK122708.1|CK122708 BES1824105i15 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I155 5-PRIME, mRNA sequence
Length = 707
Score = 430 bits (934), Expect = e-120
Identities = 189/214 (88%), Positives = 198/214 (92%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 64 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 243
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 244 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 423
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGV 462
KKSQWQDVIDLNLTGVFLCTQAATKVMMKK+KG++INIASVVGLTGN GQANYSAAKAGV
Sbjct: 424 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKKKGRVINIASVVGLTGNAGQANYSAAKAGV 603
Query: 461 IGFTKTVAREYASRNINVNAIAPGFIASDMTAEL 360
IGFTKTVAREYASRNINVNAIAPGFIASDMTAEL
Sbjct: 604 IGFTKTVAREYASRNINVNAIAPGFIASDMTAEL 705
Score = 356 bits (772), Expect = 1e-097
Identities = 145/219 (66%), Positives = 168/219 (76%)
Frame = +3 / -3
Query: 360 KFGSHIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDN 539
KF H+ C E C+ IHIDI ACI P NCFCETN SSLG +ISL +IASKTN C VD+
Sbjct: 705 KFRGHV*CYESRCDCIHIDIPACIFPSNCFCETNDSSLGSTVISLTSIASKTNN*CYVDD 526
Query: 540 FSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*S 719
SL L HHYFC SLCT+E+TSKI INY+LPLRFLHPHQQC+ NPCIIYQ + CSPFI S
Sbjct: 525 SSLFLLHHYFCGSLCTEENTSKI*INYILPLRFLHPHQQCIPRNPCIIYQDVNCSPFIKS 346
Query: 720 CFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTN 899
CFHHR YISFF NISS+G+SLTTRCFNLF D FSLFRG I++ +LA+ FSK + ++
Sbjct: 345 CFHHRFYISFFRNISSKGNSLTTRCFNLFRDCFSLFRGSCIIH*DLAASFSKSQCNSFSD 166
Query: 900 PSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHTREPTAG 1016
PS T NNNNWSFQL SI ++CLFNS ++G HTR G
Sbjct: 165 PSGSTRNNNNWSFQLCSIVHDCLFNSSDVGAHTRGEAGG 49
Score = 347 bits (753), Expect = 6e-095
Identities = 144/219 (65%), Positives = 163/219 (74%)
Frame = -2 / +3
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 51 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 230
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHI 655
+LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY +I
Sbjct: 231 ILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYEGYI 410
Query: 654 VDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQHCICSWSYWQCWPS*L*RS 475
VDEDEEISVAR N*S+SYWC PLYTGC+KSNDE+EKGK++QH I WSYWQCW S*L
Sbjct: 411 VDEDEEISVARCN*SKSYWCFPLYTGCHKSNDEEEKGKSHQHSISCWSYWQCWSS*LQCC 590
Query: 474 QGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTW 358
QGWS WFHKNSC G+CKQ+YQCEC T +H I +D TW
Sbjct: 591 QGWSHWFHKNSC*GICKQEYQCECNRTWIHSIRHDRGTW 707
Score = 305 bits (661), Expect(2) = 1e-099
Identities = 138/165 (83%), Positives = 140/165 (84%)
Frame = +1 / -1
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
VRPTTDAM TFVAACVQRKTPVRFRSITSCH*DFFILINNVS VIPALFT
Sbjct: 557 VRPTTDAMLMTLPFFFFIITFVAACVQRKTPVRFRSITSCH*DFFILINNVSLVIPALFT 378
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
SIVPHLSRAAFIIDSTSAS ETSPPKVIA PPDASIS ET+SASFEDRA*FTRTL PA
Sbjct: 377 RMSIVPHLSRAAFIIDSTSASLETSPPKVIA*PPDASISSETASASFEDRA*FTRTLQPA 198
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPE 1002
FPRA A A PIPL+APVTTTTGASS VAS T ACSTAATWV TPE
Sbjct: 197 FPRANATAFPIPLEAPVTTTTGASSSVASCTTACSTAATWVRTPE 63
Score = 128 bits (274), Expect(3) = 2e-037
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -1 / +2
Query: 793 HLVVRLSPSEEMFQKKLM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*L 614
HLVVRL P EEMF KKLM*+L**KQL INGEQ W*IMQGL HC**G*RNLSGK *L
Sbjct: 272 HLVVRLLPLEEMFLKKLM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLSGKM*L 451
Query: 613 I*ILLVSSFVHRLQQK***KREREK 539
I*ILLV S VHRL QK***+R+RE+
Sbjct: 452 I*ILLVFSSVHRLPQK***RRKREE 526
Score = 79.0 bits (166), Expect(2) = 1e-099
Identities = 38/58 (65%), Positives = 40/58 (68%)
Frame = +2 / -2
Query: 359 QVRQSYQMQ*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQHCQ*DQLQMQC 532
QV +S M * V+ HSH*Y CLH P QLFL*NQ LQPW N*L QHCQ*DQ M C
Sbjct: 706 QVPRSCLML*IQVRLHSH*YSCLHIP*QLFL*NQ*LQPWQHCN*LDQHCQ*DQQLMLC 533
Score = 71.2 bits (149), Expect(3) = 2e-035
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +2 / -2
Query: 575 QPVYKGRHQ*DSDQLRLATEIXXXXXTMCLV*SLHYLPAHLLFPIY 712
QPVY+G+HQ*D DQL LATEI TM *SLHYLP LFPIY
Sbjct: 490 QPVYRGKHQ*DLDQLHLATEISSSSSTMYPS*SLHYLPGCQLFPIY 353
Score = 66.6 bits (139), Expect(3) = 2e-035
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +1 / -1
Query: 367 AVISDAMNPGAIAFTLIFLLAYSLATVFVK 456
AV+SDAMNPGAIAFTLIFLLAYSLATVFVK
Sbjct: 698 AVMSDAMNPGAIAFTLIFLLAYSLATVFVK 609
Score = 50.1 bits (103), Expect(3) = 2e-035
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / -2
Query: 767 RR**PHHQMLQSLWRPLQPLSRTGHSLPEPCILLFQ 874
+R**P HQMLQSL R LQPLSR H+ PC LFQ
Sbjct: 298 QR**PDHQMLQSLQRLLQPLSRIVHNSLGPCSQLFQ 191
Score = 46.9 bits (96), Expect(3) = 2e-037
Identities = 27/43 (62%), Positives = 28/43 (65%)
Frame = -1 / +2
Query: 487 IIAQPRLE*LVSQKQLPGSMQAEISM*MLLHQGSLHLI*LPNL 359
I PRLE LVSQKQL G+MQA ISM*M H S H * NL
Sbjct: 578 ITVLPRLESLVSQKQLLGNMQAGISM*MQSHLDS*HQT*PRNL 706
Score = 24.0 bits (46), Expect(3) = 2e-037
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +2
Query: 1015 PAVGSLVCKPMLPLLNKQ 962
P LVC P LLNKQ
Sbjct: 50 PPASPLVCAPTSLLLNKQ 103
>gb|AV913625.1|AV913625 AV913625 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l20 5', mRNA sequence
Length = 640
Score = 407 bits (883), Expect = e-113
Identities = 174/181 (96%), Positives = 180/181 (99%)
Frame = -3 / +1
Query: 746 ADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATK 567
ADVESMMKAALDKWGTID+LVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATK
Sbjct: 1 ADVESMMKAALDKWGTIDILVNNAGITRDTLLMRMKKSQWQDVIDLNLTGVFLCTQAATK 180
Query: 566 VMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGF 387
VMMKK+KG++INIASVVGLTGN GQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGF
Sbjct: 181 VMMKKKKGRVINIASVVGLTGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGF 360
Query: 386 IASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMV 207
IASDMTAELGEELEK+ILSTIPLGRYGQPEEVAGLVEFLALNPAASY+TGQVLTIDGGMV
Sbjct: 361 IASDMTAELGEELEKRILSTIPLGRYGQPEEVAGLVEFLALNPAASYITGQVLTIDGGMV 540
Query: 206 M 204
M
Sbjct: 541 M 543
Score = 302 bits (653), Expect = 3e-081
Identities = 120/185 (64%), Positives = 140/185 (75%)
Frame = +3 / -2
Query: 192 TQILHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGS 371
+++ HYHP+++ KHL + V+GQEL+QP NFLWL+I P N QD LLKL SKF
Sbjct: 555 SKVSHYHPTIDGKHLPGDVTGRRVQGQELNQPSNFLWLSIPPQGNSRQDSLLKLLSKFRG 376
Query: 372 HIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLS 551
H+ C E C+ IHIDI ACI P NCFCETN SSLG +ISL +IASKTN C VD+ SL
Sbjct: 375 HV*CYESRCDCIHIDIPACIFPSNCFCETNDSSLGSTVISLTSIASKTNN*CYVDDSSLF 196
Query: 552 LFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHH 731
L HHYFC SLCT+E+TSKI INY+LPLRFLHPHQQC+ NPCIIYQ + CSPFI SCFHH
Sbjct: 195 LLHHYFCGSLCTEENTSKI*INYILPLRFLHPHQQCIPRNPCIIYQDVNCSPFIKSCFHH 16
Query: 732 RLYIS 746
R YIS
Sbjct: 15 RFYIS 1
Score = 297 bits (644), Expect = 6e-080
Identities = 123/182 (67%), Positives = 141/182 (77%)
Frame = -2 / +3
Query: 744 *CRVYDESSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVARRN*SESYWCLPLYTGCNKS 565
*CR+YDESSS *MGNN GK*CRDY +IVDEDEEISVAR N*S+SYWC PLYTGC+KS
Sbjct: 3 *CRIYDESSS**MGNN*HPGK*CRDYEGYIVDEDEEISVARCN*SKSYWCFPLYTGCHKS 182
Query: 564 NDEKEKGKNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVH 385
NDE+EKGK++QH I WSYWQCW S*L QGWS WFHKNSC G+CKQ+YQCEC T +H
Sbjct: 183 NDEEEKGKSHQHSISCWSYWQCWSS*LQCCQGWSHWFHKNSC*GICKQEYQCECNRTWIH 362
Query: 384 CI*YDCRTWRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGN 205
I +D TWR A*EENLV++S+ E+W RGSC VG V GP P L+ GAY+ DGN
Sbjct: 363 SIRHDRGTWRGA*EENLVDYSLGEVWTARGSCWVG*VLGPEPGGQLHHRAGAYHRWWDGN 542
Query: 204 VR 199
V+
Sbjct: 543 VK 548
Score = 159 bits (341), Expect(2) = 2e-075
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1 / -3
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
+ITIPPS+VSTCPV+*LAAG RA+NSTNPATSSG PYLP G+VDKI F AV+SD
Sbjct: 545 HITIPPSMVSTCPVM*LAAGFRAKNSTNPATSSGCPYLPKGIVDKILFSSSSPSSAVMSD 366
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
AMNPGAIAFTLIFLLAYSLATVFVK
Sbjct: 365 AMNPGAIAFTLIFLLAYSLATVFVK 291
Score = 144 bits (309), Expect(2) = 2e-075
Identities = 65/79 (82%), Positives = 65/79 (82%)
Frame = +1 / -3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
VRPTTDAM TFVAACVQRKTPVRFRSITSCH*DFFILINNVS VIPALFT
Sbjct: 239 VRPTTDAMLMTLPFFFFIITFVAACVQRKTPVRFRSITSCH*DFFILINNVSLVIPALFT 60
Query: 688 STSIVPHLSRAAFIIDSTS 744
SIVPHLSRAAFIIDSTS
Sbjct: 59 RMSIVPHLSRAAFIIDSTS 3
Score = 125 bits (267), Expect(2) = 3e-043
Identities = 66/110 (60%), Positives = 72/110 (65%)
Frame = +2 / -1
Query: 203 TLPSLRQL*APVQSYS*LRG*GPGTRPTLQLPLVGHISLTEWLTRFSSQALLQVRQSYQM 382
TLPS + *AP + + G GP T+PT QLPL H S E TRFSSQA LQV +S M
Sbjct: 544 TLPSHHRW*APAR*CNWPPGSGPRTQPTQQLPLAVHTSPRE*STRFSSQAPLQVPRSCLM 365
Query: 383 Q*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQHCQ*DQLQMQC 532
* V+ HSH*Y CLH P QLFL*NQ LQPW N*L QHCQ*DQ M C
Sbjct: 364 L*IQVRLHSH*YSCLHIP*QLFL*NQ*LQPWQHCN*LDQHCQ*DQQLMLC 215
Score = 107 bits (228), Expect(2) = 1e-046
Identities = 55/96 (57%), Positives = 62/96 (64%)
Frame = -1 / +2
Query: 487 IIAQPRLE*LVSQKQLPGSMQAEISM*MLLHQGSLHLI*LPNLEKSLRRKSCQPFR*GDM 308
I PRLE LVSQKQL G+MQA ISM*M H S H * NLE+SLRR+SC+ F G M
Sbjct: 260 ITVLPRLESLVSQKQLLGNMQAGISM*MQSHLDS*HQT*PRNLERSLRRESCRLFPWGGM 439
Query: 307 ANQRKLQGWSSSWPLTPQLAI*LDRCLQLTEGW*CK 200
+QRKL GW SSWP T + RCL GW*C+
Sbjct: 440 DSQRKLLGWLSSWP*TRRPVTSPGRCLPSMVGW*CE 547
Score = 100 bits (213), Expect(2) = 1e-046
Identities = 54/69 (78%), Positives = 58/69 (84%)
Frame = -1 / +2
Query: 745 LM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*LI*ILLVSSFVHRLQQK 566
LM*+L**KQL INGEQ W*IMQGL HC**G*RNLSGK *LI*ILLV S VHRL QK
Sbjct: 2 LM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLSGKM*LI*ILLVFSSVHRLPQK 181
Query: 565 ***KREREK 539
***+R+RE+
Sbjct: 182 ***RRKREE 208
Score = 71.2 bits (149), Expect(2) = 3e-043
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +2 / -1
Query: 575 QPVYKGRHQ*DSDQLRLATEIXXXXXTMCLV*SLHYLPAHLLFPIY 712
QPVY+G+HQ*D DQL LATEI TM *SLHYLP LFPIY
Sbjct: 172 QPVYRGKHQ*DLDQLHLATEISSSSSTMYPS*SLHYLPGCQLFPIY 35
>gb|BM097231.2|BM097231 EBpi07_SQ002_N01_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ002_N01 5', mRNA sequence
Length = 547
Score = 343 bits (744), Expect = 1e-093
Identities = 150/175 (85%), Positives = 159/175 (90%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 23 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 202
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 203 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 382
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSA 477
KKSQWQDVIDLNLTGVFLCTQAATKVMMKK+KG++INIASVVGLTGN GQANYSA
Sbjct: 383 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKKKGRVINIASVVGLTGNAGQANYSA 547
Score = 305 bits (661), Expect(2) = 1e-084
Identities = 138/165 (83%), Positives = 140/165 (84%)
Frame = +1 / -2
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
VRPTTDAM TFVAACVQRKTPVRFRSITSCH*DFFILINNVS VIPALFT
Sbjct: 516 VRPTTDAMLMTLPFFFFIITFVAACVQRKTPVRFRSITSCH*DFFILINNVSLVIPALFT 337
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
SIVPHLSRAAFIIDSTSAS ETSPPKVIA PPDASIS ET+SASFEDRA*FTRTL PA
Sbjct: 336 RMSIVPHLSRAAFIIDSTSASLETSPPKVIA*PPDASISSETASASFEDRA*FTRTLQPA 157
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPE 1002
FPRA A A PIPL+APVTTTTGASS VAS T ACSTAATWV TPE
Sbjct: 156 FPRANATAFPIPLEAPVTTTTGASSSVASCTTACSTAATWVRTPE 22
Score = 290 bits (628), Expect = 1e-077
Identities = 119/178 (66%), Positives = 140/178 (78%)
Frame = +3 / -1
Query: 483 IISLANIASKTNYRCNVDNFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCV 662
+ISL +IASKTN C VD+ SL L HHYFC SLCT+E+TSKI INY+LPLRFLHPHQQC+
Sbjct: 541 VISLTSIASKTNN*CYVDDSSLFLLHHYFCGSLCTEENTSKI*INYILPLRFLHPHQQCI 362
Query: 663 SCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGI 842
NPCIIYQ + CSPFI SCFHHR YISFF NISS+G+SLTTRCFNLF D FSLFRG I
Sbjct: 361 PRNPCIIYQDVNCSPFIKSCFHHRFYISFFRNISSKGNSLTTRCFNLFRDCFSLFRGSCI 182
Query: 843 VYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHTREPTAG 1016
++ +LA+ FSK + ++PS T NNNNWSFQL SI ++CLFNS ++G HTR G
Sbjct: 181 IH*DLAASFSKSQCNSFSDPSGSTRNNNNWSFQLCSIVHDCLFNSSDVGAHTRGEAGG 8
Score = 278 bits (601), Expect = 5e-074
Identities = 118/177 (66%), Positives = 133/177 (75%)
Frame = -2 / +1
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 10 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 189
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHI 655
+LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY +I
Sbjct: 190 ILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYEGYI 369
Query: 654 VDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQHCICSWSYWQCWPS*L 484
VDEDEEISVAR N*S+SYWC PLYTGC+KSNDE+EKGK++QH I WSYWQCW S*L
Sbjct: 370 VDEDEEISVARCN*SKSYWCFPLYTGCHKSNDEEEKGKSHQHSISCWSYWQCWSS*L 540
Score = 128 bits (274), Expect(2) = 2e-029
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -1 / +3
Query: 793 HLVVRLSPSEEMFQKKLM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*L 614
HLVVRL P EEMF KKLM*+L**KQL INGEQ W*IMQGL HC**G*RNLSGK *L
Sbjct: 231 HLVVRLLPLEEMFLKKLM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLSGKM*L 410
Query: 613 I*ILLVSSFVHRLQQK***KREREK 539
I*ILLV S VHRL QK***+R+RE+
Sbjct: 411 I*ILLVFSSVHRLPQK***RRKREE 485
Score = 71.2 bits (149), Expect(2) = 6e-021
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +2 / -3
Query: 575 QPVYKGRHQ*DSDQLRLATEIXXXXXTMCLV*SLHYLPAHLLFPIY 712
QPVY+G+HQ*D DQL LATEI TM *SLHYLP LFPIY
Sbjct: 449 QPVYRGKHQ*DLDQLHLATEISSSSSTMYPS*SLHYLPGCQLFPIY 312
Score = 50.1 bits (103), Expect(2) = 6e-021
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / -3
Query: 767 RR**PHHQMLQSLWRPLQPLSRTGHSLPEPCILLFQ 874
+R**P HQMLQSL R LQPLSR H+ PC LFQ
Sbjct: 257 QR**PDHQMLQSLQRLLQPLSRIVHNSLGPCSQLFQ 150
Score = 29.0 bits (57), Expect(2) = 1e-084
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 485 N*LGQHCQ*DQLQMQC 532
N*L QHCQ*DQ M C
Sbjct: 539 N*LDQHCQ*DQQLMLC 492
Score = 24.0 bits (46), Expect(2) = 2e-029
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +3
Query: 1015 PAVGSLVCKPMLPLLNKQ 962
P LVC P LLNKQ
Sbjct: 9 PPASPLVCAPTSLLLNKQ 62
>gb|AL505428.1|AL505428 AL505428 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08H01V 5', mRNA sequence
Length = 700
Score = 334 bits (723), Expect = 8e-091
Identities = 147/177 (83%), Positives = 157/177 (88%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 79 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 258
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 259 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 438
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAK 471
KKSQ QDVIDLNLTGVFLCTQAATKVMMKK+KG++INIA VGLTGN GQANYSA +
Sbjct: 439 KKSQXQDVIDLNLTGVFLCTQAATKVMMKKKKGRVINIAXXVGLTGNAGQANYSACQ 609
Score = 296 bits (640), Expect = 2e-079
Identities = 135/165 (81%), Positives = 137/165 (83%)
Frame = +1 / -3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
VRPT AM TFVAACVQRKTPVRFRSITSC *DFFILINNVS VIPALFT
Sbjct: 572 VRPTXXAMLMTLPFFFFIITFVAACVQRKTPVRFRSITSCX*DFFILINNVSLVIPALFT 393
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
SIVPHLSRAAFIIDSTSAS ETSPPKVIA PPDASIS ET+SASFEDRA*FTRTL PA
Sbjct: 392 RMSIVPHLSRAAFIIDSTSASLETSPPKVIA*PPDASISSETASASFEDRA*FTRTLQPA 213
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPE 1002
FPRA A A PIPL+APVTTTTGASS VAS T ACSTAATWV TPE
Sbjct: 212 FPRANATAFPIPLEAPVTTTTGASSSVASCTTACSTAATWVRTPE 78
Score = 293 bits (634), Expect = 1e-078
Identities = 120/182 (65%), Positives = 142/182 (78%)
Frame = +3 / -2
Query: 468 SLGCAIISLANIASKTNYRCNVDNFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHP 647
+L +ISL +IASKTN C VD+ SL L HHYFC SLCT+E+TSKI INY+LPLRFLHP
Sbjct: 612 ALASTVISLTSIASKTNXXCYVDDSSLFLLHHYFCGSLCTEENTSKI*INYILPLRFLHP 433
Query: 648 HQQCVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLF 827
HQQC+ NPCIIYQ + CSPFI SCFHHR YISFF NISS+G+SLTTRCFNLF D FSLF
Sbjct: 432 HQQCIPRNPCIIYQDVNCSPFIKSCFHHRFYISFFRNISSKGNSLTTRCFNLFRDCFSLF 253
Query: 828 RGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHTREP 1007
RG I++ +LA+ FSK + ++PS T NNNNWSFQL SI ++CLFNS ++G HTR
Sbjct: 252 RGSCIIH*DLAASFSKSQCNSFSDPSGSTRNNNNWSFQLCSIVHDCLFNSSDVGAHTRGE 73
Query: 1008 TA 1013
A
Sbjct: 72 AA 67
Score = 274 bits (592), Expect = 9e-073
Identities = 117/180 (65%), Positives = 132/180 (73%)
Frame = -2 / +3
Query: 1023 AAVRPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGK 844
AA +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +
Sbjct: 57 AAAXRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSE 236
Query: 843 LCPVLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYT 664
LC +LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY
Sbjct: 237 LCTILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYE 416
Query: 663 RHIVDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQHCICSWSYWQCWPS*L 484
+IVDEDEEIS AR N*S+SYWC PLYTGC+KSNDE+EKGK++QH WSYWQCW S*L
Sbjct: 417 GYIVDEDEEISXARCN*SKSYWCFPLYTGCHKSNDEEEKGKSHQHSXXCWSYWQCWSS*L 596
Score = 126 bits (270), Expect(2) = 2e-028
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = -1 / +2
Query: 793 HLVVRLSPSEEMFQKKLM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*L 614
HLVVRL P EEMF KKLM*+L**KQL INGEQ W*IMQGL HC**G*RNL GK *L
Sbjct: 287 HLVVRLLPLEEMFLKKLM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLXGKM*L 466
Query: 613 I*ILLVSSFVHRLQQK***KREREK 539
I*ILLV S VHRL QK***+R+RE+
Sbjct: 467 I*ILLVFSSVHRLPQK***RRKREE 541
Score = 68.9 bits (144), Expect(3) = 9e-024
Identities = 30/46 (65%), Positives = 32/46 (69%)
Frame = +2 / -1
Query: 575 QPVYKGRHQ*DSDQLRLATEIXXXXXTMCLV*SLHYLPAHLLFPIY 712
QPVY+G+HQ*D DQL LA EI TM *SLHYLP LFPIY
Sbjct: 505 QPVYRGKHQ*DLDQLHLAXEISSSSSTMYPS*SLHYLPGCQLFPIY 368
Score = 50.1 bits (103), Expect(3) = 9e-024
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / -1
Query: 767 RR**PHHQMLQSLWRPLQPLSRTGHSLPEPCILLFQ 874
+R**P HQMLQSL R LQPLSR H+ PC LFQ
Sbjct: 313 QR**PDHQMLQSLQRLLQPLSRIVHNSLGPCSQLFQ 206
Score = 29.5 bits (58), Expect(3) = 9e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / -1
Query: 485 N*LGQHCQ*DQLQMQC 532
N*L QHCQ*DQ M C
Sbjct: 595 N*LDQHCQ*DQQXMLC 548
Score = 23.1 bits (44), Expect(2) = 2e-028
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -1 / +2
Query: 1012 AVGSLVCKPMLPLLNKQ 962
A LVC P LLNKQ
Sbjct: 68 AASPLVCAPTSLLLNKQ 118
>gb|AL503431.1|AL503431 AL503431 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02C02T 5', mRNA sequence
Length = 700
Score = 311 bits (673), Expect(3) = 1e-089
Identities = 136/160 (85%), Positives = 145/160 (90%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 155 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 334
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 335 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 514
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIAS 522
KKSQWQDVIDLNLTGVFLCTQAATKVMMKK+KG++INIAS
Sbjct: 515 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKKKGRVINIAS 634
Score = 293 bits (635), Expect(2) = 5e-080
Identities = 133/160 (83%), Positives = 135/160 (84%)
Frame = +1 / -2
Query: 523 DAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSIV 702
DAM TFVAACVQRKTPVRFRSITSCH*DFFILINNVS VIPALFT SIV
Sbjct: 633 DAMLMTLPFFFFIITFVAACVQRKTPVRFRSITSCH*DFFILINNVSLVIPALFTRMSIV 454
Query: 703 PHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRAR 882
PHLSRAAFIIDSTSAS ETSPPKVIA PPDASIS ET+SASFEDRA*FTRTL PAFPRA
Sbjct: 453 PHLSRAAFIIDSTSASLETSPPKVIA*PPDASISSETASASFEDRA*FTRTLQPAFPRAN 274
Query: 883 AVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPE 1002
A A PIPL+APVTTTTGASS VAS T ACSTAATWV TPE
Sbjct: 273 ATAFPIPLEAPVTTTTGASSSVASCTTACSTAATWVRTPE 154
Score = 273 bits (590), Expect(2) = 1e-073
Identities = 110/164 (67%), Positives = 129/164 (78%)
Frame = +3 / -1
Query: 525 CNVDNFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCS 704
C VD+ SL L HHYFC SLCT+E+TSKI INY+LPLRFLHPHQQC+ NPCIIYQ + CS
Sbjct: 631 CYVDDSSLFLLHHYFCGSLCTEENTSKI*INYILPLRFLHPHQQCIPRNPCIIYQDVNCS 452
Query: 705 PFI*SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*S 884
PFI SCFHHR YISFF NISS+G+SLTTRCFNLF D FSLFRG I++ +LA+ FSK
Sbjct: 451 PFIKSCFHHRFYISFFRNISSKGNSLTTRCFNLFRDCFSLFRGSCIIH*DLAASFSKSQC 272
Query: 885 SCLTNPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHTREPTAG 1016
+ ++PS T NNNNWSFQL SI ++CLFNS ++G HTR G
Sbjct: 271 NSFSDPSGSTRNNNNWSFQLCSIVHDCLFNSSDVGAHTRGEAGG 140
Score = 248 bits (537), Expect = 3e-065
Identities = 108/164 (65%), Positives = 123/164 (75%)
Frame = -2 / +1
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 142 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 321
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHI 655
+LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY +I
Sbjct: 322 ILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYEGYI 501
Query: 654 VDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQHCI 523
VDEDEEISVAR N*S+SYWC PLYTGC+KSNDE+EKGK++QH I
Sbjct: 502 VDEDEEISVARCN*SKSYWCFPLYTGCHKSNDEEEKGKSHQHSI 633
Score = 128 bits (274), Expect(3) = 2e-034
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -1 / +3
Query: 793 HLVVRLSPSEEMFQKKLM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*L 614
HLVVRL P EEMF KKLM*+L**KQL INGEQ W*IMQGL HC**G*RNLSGK *L
Sbjct: 363 HLVVRLLPLEEMFLKKLM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLSGKM*L 542
Query: 613 I*ILLVSSFVHRLQQK***KREREK 539
I*ILLV S VHRL QK***+R+RE+
Sbjct: 543 I*ILLVFSSVHRLPQK***RRKREE 617
Score = 71.2 bits (149), Expect(2) = 6e-021
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +2 / -3
Query: 575 QPVYKGRHQ*DSDQLRLATEIXXXXXTMCLV*SLHYLPAHLLFPIY 712
QPVY+G+HQ*D DQL LATEI TM *SLHYLP LFPIY
Sbjct: 581 QPVYRGKHQ*DLDQLHLATEISSSSSTMYPS*SLHYLPGCQLFPIY 444
Score = 50.1 bits (103), Expect(2) = 6e-021
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / -3
Query: 767 RR**PHHQMLQSLWRPLQPLSRTGHSLPEPCILLFQ 874
+R**P HQMLQSL R LQPLSR H+ PC LFQ
Sbjct: 389 QR**PDHQMLQSLQRLLQPLSRIVHNSLGPCSQLFQ 282
Score = 37.3 bits (75), Expect(3) = 2e-034
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / +2
Query: 558 EKEKGKNYQHCICSWSYWQCWPS*L 484
+K+KG+ WSYWQCW S*L
Sbjct: 599 KKKKGRVINIASSCWSYWQCWSS*L 673
Score = 35.9 bits (72), Expect(3) = 1e-089
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / +3
Query: 521 VVGLTGNVGQANYSAAK 471
VVGLTGN GQANYSA +
Sbjct: 636 VVGLTGNAGQANYSACQ 686
Score = 25.4 bits (49), Expect(2) = 5e-080
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 485 N*LGQHCQ*DQ 517
N*L QHCQ*DQ
Sbjct: 672 N*LDQHCQ*DQ 640
Score = 24.4 bits (47), Expect(2) = 1e-073
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 471 LGCAIISLANIASKTN 518
L +ISL +IASKTN
Sbjct: 686 LASTVISLTSIASKTN 639
Score = 24.0 bits (46), Expect(3) = 2e-034
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +3
Query: 1015 PAVGSLVCKPMLPLLNKQ 962
P LVC P LLNKQ
Sbjct: 141 PPASPLVCAPTSLLLNKQ 194
Score = 23.1 bits (44), Expect(3) = 1e-089
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / +2
Query: 1064 FVTFGGGAARFS 1029
FV+FGG AAR S
Sbjct: 74 FVSFGGAAARTS 109
>gb|CA012350.1|CA012350 HT05C23r HT Hordeum vulgare subsp. vulgare cDNA clone HT05C23
5-PRIME, mRNA sequence
Length = 565
Score = 324 bits (702), Expect = 6e-088
Identities = 142/167 (85%), Positives = 151/167 (90%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 64 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 243
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 244 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 423
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASVVGLTGN 501
KKSQWQDVIDLNLTGVFLCTQAAT VMMKK+KG++INIASVVGLTGN
Sbjct: 424 KKSQWQDVIDLNLTGVFLCTQAATXVMMKKKKGRVINIASVVGLTGN 564
Score = 302 bits (654), Expect = 3e-081
Identities = 137/165 (83%), Positives = 139/165 (84%)
Frame = +1 / -3
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFT 687
VRPTTDAM T VAACVQRKTPVRFRSITSCH*DFFILINNVS VIPALFT
Sbjct: 557 VRPTTDAMLMTLPFFFFIITXVAACVQRKTPVRFRSITSCH*DFFILINNVSLVIPALFT 378
Query: 688 STSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPA 867
SIVPHLSRAAFIIDSTSAS ETSPPKVIA PPDASIS ET+SASFEDRA*FTRTL PA
Sbjct: 377 RMSIVPHLSRAAFIIDSTSASLETSPPKVIA*PPDASISSETASASFEDRA*FTRTLQPA 198
Query: 868 FPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPE 1002
FPRA A A PIPL+APVTTTTGASS VAS T ACSTAATWV TPE
Sbjct: 197 FPRANATAFPIPLEAPVTTTTGASSSVASCTTACSTAATWVRTPE 63
Score = 280 bits (605), Expect = 1e-074
Identities = 115/172 (66%), Positives = 134/172 (77%)
Frame = +3 / -2
Query: 501 IASKTNYRCNVDNFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCI 680
IASKTN C VD+ SL L HHY C SLCT+E+TSKI INY+LPLRFLHPHQQC+ NPCI
Sbjct: 564 IASKTNN*CYVDDSSLFLLHHYXCGSLCTEENTSKI*INYILPLRFLHPHQQCIPRNPCI 385
Query: 681 IYQHIYCSPFI*SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLA 860
IYQ + CSPFI SCFHHR YISFF NISS+G+SLTTRCFNLF D FSLFRG I++ +LA
Sbjct: 384 IYQDVNCSPFIKSCFHHRFYISFFRNISSKGNSLTTRCFNLFRDCFSLFRGSCIIH*DLA 205
Query: 861 SCFSKG*SSCLTNPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHTREPTAG 1016
+ FSK + ++PS T NNNNWSFQL SI ++CLFNS ++G HTR G
Sbjct: 204 ASFSKSQCNSFSDPSGSTRNNNNWSFQLCSIVHDCLFNSSDVGAHTRGEAGG 49
Score = 262 bits (567), Expect = 3e-069
Identities = 112/171 (65%), Positives = 127/171 (74%)
Frame = -2 / +3
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 51 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 230
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHI 655
+LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY +I
Sbjct: 231 ILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYEGYI 410
Query: 654 VDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQHCICSWSYWQ 502
VDEDEEISVAR N*S+SYWC PLYTGC+ SNDE+EKGK++QH I WSYWQ
Sbjct: 411 VDEDEEISVARCN*SKSYWCFPLYTGCHXSNDEEEKGKSHQHSISCWSYWQ 563
Score = 125 bits (268), Expect(2) = 1e-028
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = -1 / +2
Query: 793 HLVVRLSPSEEMFQKKLM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*L 614
HLVVRL P EEMF KKLM*+L**KQL INGEQ W*IMQGL HC**G*RNLSGK *L
Sbjct: 272 HLVVRLLPLEEMFLKKLM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLSGKM*L 451
Query: 613 I*ILLVSSFVHRLQQK***KREREK 539
I*ILLV S VHRL K***+R+RE+
Sbjct: 452 I*ILLVFSSVHRLPXK***RRKREE 526
Score = 71.2 bits (149), Expect(3) = 3e-022
Identities = 31/46 (67%), Positives = 33/46 (71%)
Frame = +2 / -1
Query: 575 QPVYKGRHQ*DSDQLRLATEIXXXXXTMCLV*SLHYLPAHLLFPIY 712
QPVY+G+HQ*D DQL LATEI TM *SLHYLP LFPIY
Sbjct: 490 QPVYRGKHQ*DLDQLHLATEISSSSSTMYPS*SLHYLPGCQLFPIY 353
Score = 50.1 bits (103), Expect(3) = 3e-022
Identities = 24/36 (66%), Positives = 26/36 (72%)
Frame = +2 / -1
Query: 767 RR**PHHQMLQSLWRPLQPLSRTGHSLPEPCILLFQ 874
+R**P HQMLQSL R LQPLSR H+ PC LFQ
Sbjct: 298 QR**PDHQMLQSLQRLLQPLSRIVHNSLGPCSQLFQ 191
Score = 24.0 bits (46), Expect(2) = 1e-028
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +2
Query: 1015 PAVGSLVCKPMLPLLNKQ 962
P LVC P LLNKQ
Sbjct: 50 PPASPLVCAPTSLLLNKQ 103
Score = 22.1 bits (42), Expect(3) = 3e-022
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2 / -1
Query: 500 HCQ*DQLQMQC 532
HCQ*DQ M C
Sbjct: 565 HCQ*DQQLMLC 533
>gb|CV054090.1|CV054090 BNEL106f2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL106f2 5' similar to OSJNBb0006N15.11, mRNA
sequence
Length = 702
Score = 308 bits (666), Expect(2) = 4e-084
Identities = 135/161 (83%), Positives = 144/161 (89%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 211 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 390
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 391 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 570
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRKGKIINIASV 519
KKSQWQDVIDLNLTGVFLCTQA KVMMKK+KG++INIASV
Sbjct: 571 KKSQWQDVIDLNLTGVFLCTQACHKVMMKKKKGRVINIASV 693
Score = 287 bits (622), Expect = 7e-077
Identities = 131/161 (81%), Positives = 133/161 (82%)
Frame = +1 / -2
Query: 520 TDAMXXXXXXXXXXXTFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSI 699
TDAM T ACVQRKTPVRFRSITSCH*DFFILINNVS VIPALFT SI
Sbjct: 692 TDAMLMTLPFFFFIITLWQACVQRKTPVRFRSITSCH*DFFILINNVSLVIPALFTRMSI 513
Query: 700 VPHLSRAAFIIDSTSASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRA 879
VPHLSRAAFIIDSTSAS ETSPPKVIA PPDASIS ET+SASFEDRA*FTRTL PAFPRA
Sbjct: 512 VPHLSRAAFIIDSTSASLETSPPKVIA*PPDASISSETASASFEDRA*FTRTLQPAFPRA 333
Query: 880 RAVALPIPLDAPVTTTTGASSLVASFTIACSTAATWVCTPE 1002
A A PIPL+APVTTTTGASS VAS T ACSTAATWV TPE
Sbjct: 332 NATAFPIPLEAPVTTTTGASSSVASCTTACSTAATWVRTPE 210
Score = 267 bits (578), Expect = 8e-071
Identities = 108/164 (65%), Positives = 127/164 (77%)
Frame = +3 / -1
Query: 525 CNVDNFSLSLFHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCS 704
C VD+ L L HHYF SLCT+E+TSKI INY+LPLRFLHPHQQC+ NPCIIYQ + CS
Sbjct: 687 CYVDDSPLFLLHHYFVASLCTEENTSKI*INYILPLRFLHPHQQCIPRNPCIIYQDVNCS 508
Query: 705 PFI*SCFHHRLYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*S 884
PFI SCFHHR YISFF NISS+G+SLTTRCFNLF D FSLFRG I++ +LA+ FSK
Sbjct: 507 PFIKSCFHHRFYISFFRNISSKGNSLTTRCFNLFRDCFSLFRGSCIIH*DLAASFSKSQC 328
Query: 885 SCLTNPSRCTCNNNNWSFQLGSIFYNCLFNSGNMGLHTREPTAG 1016
+ ++PS T NNNNWSFQL SI ++CLFNS ++G HTR G
Sbjct: 327 NSFSDPSGSTRNNNNWSFQLCSIVHDCLFNSSDVGAHTRGEAGG 196
Score = 239 bits (516), Expect = 3e-062
Identities = 105/164 (64%), Positives = 121/164 (73%)
Frame = -2 / +3
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 198 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 377
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHI 655
+LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY +I
Sbjct: 378 ILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYEGYI 557
Query: 654 VDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGKNYQHCI 523
VDEDEEISVAR N*S+SYWC PLYTG +SNDE+EKG+++QH I
Sbjct: 558 VDEDEEISVARCN*SKSYWCFPLYTGLPQSNDEEEKGESHQHSI 689
Score = 122 bits (262), Expect(2) = 1e-027
Identities = 65/83 (78%), Positives = 68/83 (81%)
Frame = -1 / +2
Query: 793 HLVVRLSPSEEMFQKKLM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*L 614
HLVVRL P EEMF KKLM*+L**KQL INGEQ W*IMQGL HC**G*RNLSGK *L
Sbjct: 419 HLVVRLLPLEEMFLKKLM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLSGKM*L 598
Query: 613 I*ILLVSSFVHRLQQK***KRER 545
I*ILLV S VHRL K***+R+R
Sbjct: 599 I*ILLVFSSVHRLATK***RRKR 667
Score = 24.9 bits (48), Expect(2) = 4e-084
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3 / +1
Query: 1169 ASRRPLMXXXXXXXXXXXXXXXXXXXXXXXXXXXGFVTFGGGAARFS 1029
AS R LM GFV+FGG AAR S
Sbjct: 25 ASLRYLMAAATAAAVSSPAVTAPLPRAASSSARRGFVSFGGAAARTS 165
Score = 24.0 bits (46), Expect(2) = 1e-027
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +2
Query: 1015 PAVGSLVCKPMLPLLNKQ 962
P LVC P LLNKQ
Sbjct: 197 PPASPLVCAPTSLLLNKQ 250
>gb|AV918929.1|AV918929 AV918929 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l20 3', mRNA sequence
Length = 690
Score = 270 bits (585), Expect(2) = 9e-080
Identities = 118/129 (91%), Positives = 123/129 (95%)
Frame = -3 / -1
Query: 590 LCTQAATKVMMKKRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNIN 411
L T KVMMKK+KG++INIASVVGLTGN GQANYSAAKAGVIGFTKTVAREYASRNIN
Sbjct: 648 LYTGLPQKVMMKKKKGRVINIASVVGLTGNAGQANYSAAKAGVIGFTKTVAREYASRNIN 469
Query: 410 VNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQV 231
VNAIAPGFIASDMTAELGEELEK+ILSTIPLGRYGQPEEVAGLVEFLALNPAASY+TGQV
Sbjct: 468 VNAIAPGFIASDMTAELGEELEKRILSTIPLGRYGQPEEVAGLVEFLALNPAASYITGQV 289
Query: 230 LTIDGGMVM 204
LTIDGGMVM
Sbjct: 288 LTIDGGMVM 262
Score = 190 bits (409), Expect(2) = 7e-050
Identities = 76/130 (58%), Positives = 92/130 (70%)
Frame = -2 / -3
Query: 588 LYTGCNKSNDEKEKGKNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQC 409
++ K NDE+EKGK++QH I WSYWQCW S*L QGWS WFHKNSC G+CKQ+YQC
Sbjct: 646 VHRAATKGNDEEEKGKSHQHSISCWSYWQCWSS*LQCCQGWSHWFHKNSC*GICKQEYQC 467
Query: 408 ECYCTRVHCI*YDCRTWRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGA 229
EC T +H I +D TWR A*EENLV++S+ E+W RGSC VG V GP P L+ GA
Sbjct: 466 ECNRTWIHSIRHDRGTWRGA*EENLVDYSLGEVWTARGSCWVG*VLGPEPGGQLHHRAGA 287
Query: 228 YN*RRDGNVR 199
Y+ DGNV+
Sbjct: 286 YHRWWDGNVK 257
Score = 182 bits (392), Expect(2) = 7e-053
Identities = 75/136 (55%), Positives = 91/136 (66%)
Frame = +3 / +1
Query: 192 TQILHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGS 371
+++ HYHP+++ KHL + V+GQEL+QP NFLWL+I P N QD LLKL SKF
Sbjct: 250 SKVSHYHPTIDGKHLPGDVTGRRVQGQELNQPSNFLWLSIPPQGNSRQDSLLKLLSKFRG 429
Query: 372 HIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLS 551
H+ C E C+ IHIDI ACI P NCFCETN SSLG +ISL +IASKTN C VD+ SL
Sbjct: 430 HV*CYESRCDCIHIDIPACIFPSNCFCETNDSSLGSTVISLTSIASKTNN*CYVDDSSLF 609
Query: 552 LFHHYFCCSLCTKEDT 599
L HHY C + T
Sbjct: 610 LLHHYLLWQPCVQRKT 657
Score = 159 bits (341), Expect(3) = 4e-045
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1 / +2
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
+ITIPPS+VSTCPV+*LAAG RA+NSTNPATSSG PYLP G+VDKI F AV+SD
Sbjct: 260 HITIPPSMVSTCPVM*LAAGFRAKNSTNPATSSGCPYLPKGIVDKILFSSSSPSSAVMSD 439
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
AMNPGAIAFTLIFLLAYSLATVFVK
Sbjct: 440 AMNPGAIAFTLIFLLAYSLATVFVK 514
Score = 125 bits (267), Expect(2) = 2e-032
Identities = 66/110 (60%), Positives = 72/110 (65%)
Frame = +2 / +3
Query: 203 TLPSLRQL*APVQSYS*LRG*GPGTRPTLQLPLVGHISLTEWLTRFSSQALLQVRQSYQM 382
TLPS + *AP + + G GP T+PT QLPL H S E TRFSSQA LQV +S M
Sbjct: 261 TLPSHHRW*APAR*CNWPPGSGPRTQPTQQLPLAVHTSPRE*STRFSSQAPLQVPRSCLM 440
Query: 383 Q*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQHCQ*DQLQMQC 532
* V+ HSH*Y CLH P QLFL*NQ LQPW N*L QHCQ*DQ M C
Sbjct: 441 L*IQVRLHSH*YSCLHIP*QLFL*NQ*LQPWQHCN*LDQHCQ*DQQLMLC 590
Score = 107 bits (228), Expect(2) = 6e-029
Identities = 55/96 (57%), Positives = 62/96 (64%)
Frame = -1 / -2
Query: 487 IIAQPRLE*LVSQKQLPGSMQAEISM*MLLHQGSLHLI*LPNLEKSLRRKSCQPFR*GDM 308
I PRLE LVSQKQL G+MQA ISM*M H S H * NLE+SLRR+SC+ F G M
Sbjct: 545 ITVLPRLESLVSQKQLLGNMQAGISM*MQSHLDS*HQT*PRNLERSLRRESCRLFPWGGM 366
Query: 307 ANQRKLQGWSSSWPLTPQLAI*LDRCLQLTEGW*CK 200
+QRKL GW SSWP T + RCL GW*C+
Sbjct: 365 DSQRKLLGWLSSWP*TRRPVTSPGRCLPSMVGW*CE 258
Score = 47.3 bits (97), Expect(2) = 9e-080
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -3 / -2
Query: 629 WQDVIDLNLTGVFLCTQAATK 567
WQDVIDLNLTGVFLCTQ K
Sbjct: 689 WQDVIDLNLTGVFLCTQGCHK 627
Score = 46.0 bits (94), Expect(2) = 7e-053
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1 / +1
Query: 580 CVQRKTPVRFRSITSCH 630
CVQRKTPVRFRSITSCH
Sbjct: 640 CVQRKTPVRFRSITSCH 690
Score = 40.9 bits (83), Expect(2) = 6e-029
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = -2 / -1
Query: 630 VARRN*SESYWCLPLYTGCNKSNDEKEK 547
VAR N*S+SYWC PLYTG + K+K
Sbjct: 690 VARCN*SKSYWCFPLYTGLPQKVMMKKK 607
Score = 37.7 bits (76), Expect(3) = 4e-045
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3 / +3
Query: 567 FCCSLCTKEDTSKIQINYVLP 629
F +LCT+E+TSKI INY+LP
Sbjct: 627 FVAALCTEENTSKI*INYILP 689
Score = 34.5 bits (69), Expect(2) = 2e-032
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 578 PVYKGRHQ*DSDQLRLA 628
PVY+G+HQ*D DQL LA
Sbjct: 638 PVYRGKHQ*DLDQLHLA 688
Score = 28.1 bits (55), Expect(2) = 7e-050
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -1 / -3
Query: 628 GKT*LI*ILLVSSFVHRLQQK 566
GK *LI*ILLV S VHR K
Sbjct: 688 GKM*LI*ILLVFSSVHRAATK 626
Score = 24.0 bits (46), Expect(3) = 4e-045
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1 / +2
Query: 508 VRPTTDAMXXXXXXXXXXXTFVAACVQR 591
VRPTTDAM TF + V R
Sbjct: 566 VRPTTDAMLMTLPFFFFIITFCGSPVYR 649
>gb|BG417399.2|BG417399 HVSMEk0017D09f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0017D09f, mRNA sequence
Length = 802
Score = 281 bits (608), Expect(2) = 3e-076
Identities = 125/151 (82%), Positives = 133/151 (88%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 235 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 414
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 415 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 594
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKR 549
KKSQWQDVIDLNLTGVFLCTQAA KV K++
Sbjct: 595 KKSQWQDVIDLNLTGVFLCTQAAPKV**KRK 687
Score = 281 bits (608), Expect = 6e-075
Identities = 127/146 (86%), Positives = 129/146 (88%)
Frame = +1 / -3
Query: 565 TFVAACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDSTS 744
TF AA VQR TPVRFRSITSCH*DFFILINNVS VIPALFT SIVPHLSRAAFIIDSTS
Sbjct: 671 TFGAAWVQRNTPVRFRSITSCH*DFFILINNVSLVIPALFTRMSIVPHLSRAAFIIDSTS 492
Query: 745 ASFETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTT 924
AS ETSPPKVIA PPDASIS ET+SASFEDRA*FTRTL PAFPRA A A PIPL+APVTT
Sbjct: 491 ASLETSPPKVIA*PPDASISSETASASFEDRA*FTRTLQPAFPRANATAFPIPLEAPVTT 312
Query: 925 TTGASSLVASFTIACSTAATWVCTPE 1002
TTGASS VAS T ACSTAATWV TPE
Sbjct: 311 TTGASSSVASCTTACSTAATWVRTPE 234
Score = 244 bits (527), Expect = 8e-064
Identities = 101/154 (65%), Positives = 118/154 (76%)
Frame = +3 / -2
Query: 555 FHHYFCCSLCTKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHR 734
F YF SL T+E TSKI INY+LPLRFLHPHQQC+ NPCIIYQ + CSPFI SCFHHR
Sbjct: 681 FSSYFWGSLGTEEHTSKI*INYILPLRFLHPHQQCIPRNPCIIYQDVNCSPFIKSCFHHR 502
Query: 735 LYISFF*NISSEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCT 914
YISFF NISS+G+SLTTRCFNLF D FSLFRG I++ +LA+ FSK + ++PS T
Sbjct: 501 FYISFFRNISSKGNSLTTRCFNLFRDCFSLFRGSCIIH*DLAASFSKSQCNSFSDPSGST 322
Query: 915 CNNNNWSFQLGSIFYNCLFNSGNMGLHTREPTAG 1016
NNNNWSFQL SI ++CLFNS ++G HTR G
Sbjct: 321 RNNNNWSFQLCSIVHDCLFNSSDVGAHTRGEAGG 220
Score = 221 bits (478), Expect = 5e-057
Identities = 99/158 (62%), Positives = 114/158 (72%)
Frame = -2 / +3
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 222 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 401
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHI 655
+LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY +I
Sbjct: 402 ILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYEGYI 581
Query: 654 VDEDEEISVARRN*SESYWCLPLYTGCNKSNDEKEKGK 541
VDEDEEISVAR N*S+SYWC+PLY GC KS +K++ K
Sbjct: 582 VDEDEEISVARCN*SKSYWCVPLYPGCPKSMMKKKREK 695
Score = 114 bits (243), Expect(2) = 5e-025
Identities = 60/76 (78%), Positives = 61/76 (80%)
Frame = -1 / +2
Query: 793 HLVVRLSPSEEMFQKKLM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*L 614
HLVVRL P EEMF KKLM*+L**KQL INGEQ W*IMQGL HC**G*RNLSGK *L
Sbjct: 443 HLVVRLLPLEEMFLKKLM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLSGKM*L 622
Query: 613 I*ILLVSSFVHRLQQK 566
I*ILLV S V RL QK
Sbjct: 623 I*ILLVCSSVPRLPQK 670
Score = 24.9 bits (48), Expect(2) = 3e-076
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3 / +1
Query: 1169 ASRRPLMXXXXXXXXXXXXXXXXXXXXXXXXXXXGFVTFGGGAARFS 1029
AS R LM GFV+FGG AAR S
Sbjct: 49 ASLRYLMAAATAAAVSSPAVTAPLPRAASSSARRGFVSFGGAAARTS 189
Score = 24.0 bits (46), Expect(2) = 5e-025
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +2
Query: 1015 PAVGSLVCKPMLPLLNKQ 962
P LVC P LLNKQ
Sbjct: 221 PPASPLVCAPTSLLLNKQ 274
>gb|BI954147.1|BI954147 HVSMEm0016G03f Hordeum vulgare green seedling EST library HVcDNA0014
(Blumeria infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEm0016G03f, mRNA sequence
Length = 664
Score = 273 bits (590), Expect = 2e-072
Identities = 123/143 (86%), Positives = 125/143 (87%)
Frame = +1 / -2
Query: 574 AACVQRKTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDSTSASF 753
A VQR TPVRFRSI SCH*DFFILINNVS VIPALFT SIVPHLSRAAFIIDSTSAS
Sbjct: 486 AGLVQRNTPVRFRSIHSCH*DFFILINNVSLVIPALFTRMSIVPHLSRAAFIIDSTSASL 307
Query: 754 ETSPPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTG 933
ETSPPKVIA PPDASIS ET+SASFEDRA*FTRTL PAFPRA A A PIPL+APVTTTTG
Sbjct: 306 ETSPPKVIA*PPDASISSETASASFEDRA*FTRTLQPAFPRANATAFPIPLEAPVTTTTG 127
Query: 934 ASSLVASFTIACSTAATWVCTPE 1002
ASS VAS T ACSTAATWV TPE
Sbjct: 126 ASSSVASCTTACSTAATWVRTPE 58
Score = 269 bits (581), Expect(2) = 2e-075
Identities = 119/145 (82%), Positives = 127/145 (87%)
Frame = -3 / +2
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 59 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 238
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 239 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 418
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATK 567
KKSQWQ+ IDLNLTGVFLCT+ A K
Sbjct: 419 KKSQWQE*IDLNLTGVFLCTRPAHK 493
Score = 223 bits (482), Expect = 1e-057
Identities = 93/144 (64%), Positives = 110/144 (76%)
Frame = +3 / -1
Query: 585 TKEDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NIS 764
T++ TS I IN LPLRFLHPHQQC+ NPCIIYQ + CSPFI SCFHHR YISFF NIS
Sbjct: 475 TEKYTS*I*INSFLPLRFLHPHQQCIPRNPCIIYQDVNCSPFIKSCFHHRFYISFFRNIS 296
Query: 765 SEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQL 944
S+G+SLTTRCFNLF D FSLFRG I++ +LA+ FSK + ++PS T NNNNWSFQL
Sbjct: 295 SKGNSLTTRCFNLFRDCFSLFRGSCIIH*DLAASFSKSQCNSFSDPSGSTRNNNNWSFQL 116
Query: 945 GSIFYNCLFNSGNMGLHTREPTAG 1016
SI ++CLFNS ++G HTR G
Sbjct: 115 CSIVHDCLFNSSDVGAHTRGEAGG 44
Score = 206 bits (444), Expect(3) = 6e-057
Identities = 92/147 (62%), Positives = 104/147 (70%)
Frame = -2 / +1
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 46 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 225
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHI 655
+LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY +I
Sbjct: 226 ILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYEGYI 405
Query: 654 VDEDEEISVARRN*SESYWCLPLYTGC 574
VDEDEEISVAR N*S+S WC+ LY C
Sbjct: 406 VDEDEEISVARMN*SKSNWCISLYQAC 486
Score = 34.5 bits (69), Expect(2) = 2e-075
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = -3 / +1
Query: 554 KRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAI 399
+RKG+ + G TG G+ Y+AAKAG + K V E R+ V+ +
Sbjct: 502 RRKGESLQHCPSGGPTGEAGKPIYNAAKAGSLDCKKQVQGECTRRSPPVSVL 657
Score = 28.6 bits (56), Expect(3) = 6e-057
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2 / +3
Query: 516 WSYWQCWPS*L*RSQGWSDWFHKNSCQGV 430
W+YW+ W + + QGW K G+
Sbjct: 540 WAYWRSWETYIQCCQGWIIGLQKTGAGGM 626
Score = 25.8 bits (50), Expect(3) = 6e-057
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -3 / +2
Query: 557 KKRKGKIINIASVVGLTGNVG 495
++ KG++ +IA VVGL +G
Sbjct: 500 EEEKGRVFSIAPVVGLLAKLG 562
>gb|BI958890.1|BI958890 HVSMEn0017A21f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0017A21f,
mRNA sequence
Length = 621
Score = 265 bits (573), Expect = 4e-070
Identities = 121/153 (79%), Positives = 125/153 (81%)
Frame = +1 / -2
Query: 592 KTPVRFRSITSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDSTSASFETSPPK 771
KTPVRFRSITSC *DFFILINNVS VIPALFT SIVPHLSRAAFIIDSTSAS ETSPPK
Sbjct: 620 KTPVRFRSITSCX*DFFILINNVSLVIPALFTRMSIVPHLSRAAFIIDSTSASLETSPPK 441
Query: 772 VIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTGASSLVA 951
VIA PPDASIS ET+SASFEDRA*FTRTL PAFPRA A A PIPL+APVTTTTG SS VA
Sbjct: 440 VIA*PPDASISSETASASFEDRA*FTRTLQPAFPRANATAFPIPLEAPVTTTTGTSSSVA 261
Query: 952 SFTIACSTAATWVCTPENPRPDRSVGEKRAAPP 1050
S T ACSTAATWV TPE + +PP
Sbjct: 260 SCTTACSTAATWVRTPEEKPAAAARRRSDRSPP 162
Score = 258 bits (558), Expect(2) = 1e-069
Identities = 114/137 (83%), Positives = 120/137 (87%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LE PVVVVTGASR GCKVLVNYARSSKE
Sbjct: 211 SGVRTHVAAVEQAVVHDATELEVPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 390
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+EIEASGG+AITFGGDVSKEADVESMMKAALDKWGTID+LVNNAGITRDTLLMRM
Sbjct: 391 AEAVSEEIEASGGQAITFGGDVSKEADVESMMKAALDKWGTIDILVNNAGITRDTLLMRM 570
Query: 641 KKSQWQDVIDLNLTGVF 591
KKS WQDVIDLNLTGVF
Sbjct: 571 KKSXWQDVIDLNLTGVF 621
Score = 231 bits (498), Expect = 8e-060
Identities = 93/142 (65%), Positives = 111/142 (78%)
Frame = +3 / -1
Query: 591 EDTSKIQINYVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NISSE 770
E+TSKI INY+LP RFLHPHQQC+ NPCIIYQ + CSPFI SCFHHR YISFF NISS+
Sbjct: 621 ENTSKI*INYILPXRFLHPHQQCIPRNPCIIYQDVNCSPFIKSCFHHRFYISFFRNISSK 442
Query: 771 GDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQLGS 950
G+SLTTRCFNLF D FSLFRG I++ +LA+ FSK + ++PS T NNNNW+FQL S
Sbjct: 441 GNSLTTRCFNLFRDCFSLFRGSCIIH*DLAASFSKSQCNSFSDPSGSTRNNNNWNFQLCS 262
Query: 951 IFYNCLFNSGNMGLHTREPTAG 1016
I ++CLFNS ++G HTR G
Sbjct: 261 IVHDCLFNSSDVGAHTRGEAGG 196
Score = 198 bits (426), Expect = 7e-050
Identities = 89/140 (63%), Positives = 100/140 (71%)
Frame = -2 / +3
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 198 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 377
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHI 655
+LERG* L RD*SIWW GY+L RRCF RS*CR+YDESSS *MGNN GK*CRDY +I
Sbjct: 378 ILERG*SSL*RD*SIWWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPGK*CRDYEGYI 557
Query: 654 VDEDEEISVARRN*SESYWC 595
VDEDEEIS AR N*S+SYWC
Sbjct: 558 VDEDEEISXARCN*SKSYWC 617
Score = 102 bits (218), Expect(2) = 1e-021
Identities = 53/66 (80%), Positives = 54/66 (81%)
Frame = -1 / +2
Query: 793 HLVVRLSPSEEMFQKKLM*SL**KQL*INGEQ*MCW*IMQGLHETHC**G*RNLSGKT*L 614
HLVVRL P EEMF KKLM*+L**KQL INGEQ W*IMQGL HC**G*RNL GK *L
Sbjct: 419 HLVVRLLPLEEMFLKKLM*NL**KQLLINGEQLTSW*IMQGLRGIHC**G*RNLXGKM*L 598
Query: 613 I*ILLV 596
I*ILLV
Sbjct: 599 I*ILLV 616
Score = 26.3 bits (51), Expect(2) = 1e-069
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = -3 / +1
Query: 1178 GSFASRRPLMXXXXXXXXXXXXXXXXXXXXXXXXXXXGFVTFGGGAAR 1035
G+ AS R LM GFV+FGG AAR
Sbjct: 16 GASASLRYLMAAATAAAVSSPAVTAPLPRAASSSARRGFVSFGGAAAR 159
Score = 24.0 bits (46), Expect(2) = 1e-021
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1 / +2
Query: 1015 PAVGSLVCKPMLPLLNKQ 962
P LVC P LLNKQ
Sbjct: 197 PPASPLVCAPTSLLLNKQ 250
>gb|AL502696.1|AL502696 AL502696 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08H01u 3', mRNA sequence
Length = 451
Score = 259 bits (559), Expect = 3e-068
Identities = 111/117 (94%), Positives = 116/117 (99%)
Frame = -3 / -2
Query: 554 KRKGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASD 375
K+KG++INIASVVGLTGN GQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASD
Sbjct: 450 KKKGRVINIASVVGLTGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASD 271
Query: 374 MTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
MTAELGEELEK+ILSTIPLGRYGQPEEVAGLVEFLALNPAASY+TGQVLTIDGGMVM
Sbjct: 270 MTAELGEELEKRILSTIPLGRYGQPEEVAGLVEFLALNPAASYITGQVLTIDGGMVM 100
Score = 179 bits (385), Expect = 3e-044
Identities = 72/119 (60%), Positives = 86/119 (72%)
Frame = -2 / -1
Query: 555 KEKGKNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI* 376
+EKGK++QH I WSYWQCW S*L QGWS WFHKNSC G+CKQ+YQCEC T +H I
Sbjct: 451 EEKGKSHQHSISCWSYWQCWSS*LQCCQGWSHWFHKNSC*GICKQEYQCECNRTWIHSIR 272
Query: 375 YDCRTWRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
+D TWR A*EENLV++S+ E+W RGSC VG V GP P L+ GAY+ DGNV+
Sbjct: 271 HDRGTWRGA*EENLVDYSLGEVWTARGSCWVG*VLGPEPGGQLHHRAGAYHRWWDGNVK 95
Score = 168 bits (361), Expect = 7e-041
Identities = 70/121 (57%), Positives = 85/121 (70%)
Frame = +3 / +1
Query: 192 TQILHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGS 371
+++ HYHP+++ KHL + V+GQEL+QP NFLWL+I P N QD LLKL SKF
Sbjct: 88 SKVSHYHPTIDGKHLPGDVTGRRVQGQELNQPSNFLWLSIPPQGNSRQDSLLKLLSKFRG 267
Query: 372 HIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSLS 551
H+ C E C+ IHIDI ACI P NCFCETN SSLG +ISL +IASKTN C VD+ SL
Sbjct: 268 HV*CYESRCDCIHIDIPACIFPSNCFCETNDSSLGSTVISLTSIASKTNN*CYVDDSSLF 447
Query: 552 L 554
L
Sbjct: 448 L 450
Score = 159 bits (341), Expect = 4e-038
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1 / +2
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
+ITIPPS+VSTCPV+*LAAG RA+NSTNPATSSG PYLP G+VDKI F AV+SD
Sbjct: 98 HITIPPSMVSTCPVM*LAAGFRAKNSTNPATSSGCPYLPKGIVDKILFSSSSPSSAVMSD 277
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
AMNPGAIAFTLIFLLAYSLATVFVK
Sbjct: 278 AMNPGAIAFTLIFLLAYSLATVFVK 352
Score = 125 bits (267), Expect = 6e-028
Identities = 66/110 (60%), Positives = 72/110 (65%)
Frame = +2 / +3
Query: 203 TLPSLRQL*APVQSYS*LRG*GPGTRPTLQLPLVGHISLTEWLTRFSSQALLQVRQSYQM 382
TLPS + *AP + + G GP T+PT QLPL H S E TRFSSQA LQV +S M
Sbjct: 99 TLPSHHRW*APAR*CNWPPGSGPRTQPTQQLPLAVHTSPRE*STRFSSQAPLQVPRSCLM 278
Query: 383 Q*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQHCQ*DQLQMQC 532
* V+ HSH*Y CLH P QLFL*NQ LQPW N*L QHCQ*DQ M C
Sbjct: 279 L*IQVRLHSH*YSCLHIP*QLFL*NQ*LQPWQHCN*LDQHCQ*DQQLMLC 428
Score = 107 bits (228), Expect = 1e-022
Identities = 55/96 (57%), Positives = 62/96 (64%)
Frame = -1 / -3
Query: 487 IIAQPRLE*LVSQKQLPGSMQAEISM*MLLHQGSLHLI*LPNLEKSLRRKSCQPFR*GDM 308
I PRLE LVSQKQL G+MQA ISM*M H S H * NLE+SLRR+SC+ F G M
Sbjct: 383 ITVLPRLESLVSQKQLLGNMQAGISM*MQSHLDS*HQT*PRNLERSLRRESCRLFPWGGM 204
Query: 307 ANQRKLQGWSSSWPLTPQLAI*LDRCLQLTEGW*CK 200
+QRKL GW SSWP T + RCL GW*C+
Sbjct: 203 DSQRKLLGWLSSWP*TRRPVTSPGRCLPSMVGW*CE 96
>gb|CA011564.1|CA011564 HT05C23u HT Hordeum vulgare subsp. vulgare cDNA clone HT05C23
3-PRIME, mRNA sequence
Length = 543
Score = 250 bits (541), Expect = 1e-065
Identities = 108/113 (95%), Positives = 112/113 (99%)
Frame = -3 / -1
Query: 542 KIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAE 363
++INIASVVGLTGN GQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAE
Sbjct: 543 RVINIASVVGLTGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAE 364
Query: 362 LGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
LGEELEK+ILSTIPLGRYGQPEEVAGLVEFLALNPAASY+TGQVLTIDGGMVM
Sbjct: 363 LGEELEKRILSTIPLGRYGQPEEVAGLVEFLALNPAASYITGQVLTIDGGMVM 205
Score = 169 bits (363), Expect = 3e-041
Identities = 68/114 (59%), Positives = 81/114 (71%)
Frame = -2 / -3
Query: 540 NYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRT 361
++QH I WSYWQCW S*L QGWS WFHKNSC G+CKQ+YQCEC T +H I +D T
Sbjct: 541 SHQHSISCWSYWQCWSS*LQCCQGWSHWFHKNSC*GICKQEYQCECNRTWIHSIRHDRGT 362
Query: 360 WRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
WR A*EENLV++S+ E+W RGSC VG V GP P L+ GAY+ DGNV+
Sbjct: 361 WRGA*EENLVDYSLGEVWTARGSCWVG*VLGPEPGGQLHHRAGAYHRWWDGNVK 200
Score = 164 bits (353), Expect = 8e-040
Identities = 67/116 (57%), Positives = 82/116 (70%)
Frame = +3 / +1
Query: 192 TQILHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGS 371
+++ HYHP+++ KHL + V+GQEL+QP NFLWL+I P N QD LLKL SKF
Sbjct: 193 SKVSHYHPTIDGKHLPGDVTGRRVQGQELNQPSNFLWLSIPPQGNSRQDSLLKLLSKFRG 372
Query: 372 HIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDN 539
H+ C E C+ IHIDI ACI P NCFCETN SSLG +ISL +IASKTN C VD+
Sbjct: 373 HV*CYESRCDCIHIDIPACIFPSNCFCETNDSSLGSTVISLTSIASKTNN*CYVDD 540
Score = 159 bits (341), Expect = 4e-038
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1 / +2
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
+ITIPPS+VSTCPV+*LAAG RA+NSTNPATSSG PYLP G+VDKI F AV+SD
Sbjct: 203 HITIPPSMVSTCPVM*LAAGFRAKNSTNPATSSGCPYLPKGIVDKILFSSSSPSSAVMSD 382
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
AMNPGAIAFTLIFLLAYSLATVFVK
Sbjct: 383 AMNPGAIAFTLIFLLAYSLATVFVK 457
Score = 125 bits (267), Expect = 6e-028
Identities = 66/110 (60%), Positives = 72/110 (65%)
Frame = +2 / +3
Query: 203 TLPSLRQL*APVQSYS*LRG*GPGTRPTLQLPLVGHISLTEWLTRFSSQALLQVRQSYQM 382
TLPS + *AP + + G GP T+PT QLPL H S E TRFSSQA LQV +S M
Sbjct: 204 TLPSHHRW*APAR*CNWPPGSGPRTQPTQQLPLAVHTSPRE*STRFSSQAPLQVPRSCLM 383
Query: 383 Q*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQHCQ*DQLQMQC 532
* V+ HSH*Y CLH P QLFL*NQ LQPW N*L QHCQ*DQ M C
Sbjct: 384 L*IQVRLHSH*YSCLHIP*QLFL*NQ*LQPWQHCN*LDQHCQ*DQQLMLC 533
Score = 107 bits (228), Expect = 1e-022
Identities = 55/96 (57%), Positives = 62/96 (64%)
Frame = -1 / -2
Query: 487 IIAQPRLE*LVSQKQLPGSMQAEISM*MLLHQGSLHLI*LPNLEKSLRRKSCQPFR*GDM 308
I PRLE LVSQKQL G+MQA ISM*M H S H * NLE+SLRR+SC+ F G M
Sbjct: 488 ITVLPRLESLVSQKQLLGNMQAGISM*MQSHLDS*HQT*PRNLERSLRRESCRLFPWGGM 309
Query: 307 ANQRKLQGWSSSWPLTPQLAI*LDRCLQLTEGW*CK 200
+QRKL GW SSWP T + RCL GW*C+
Sbjct: 308 DSQRKLLGWLSSWP*TRRPVTSPGRCLPSMVGW*CE 201
>gb|BF263367.2|BF263367 HV_CEa0006I24f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006I24f, mRNA sequence
Length = 593
Score = 236 bits (510), Expect = 2e-061
Identities = 106/129 (82%), Positives = 113/129 (87%)
Frame = +1 / -1
Query: 619 TSCH*DFFILINNVSRVIPALFTSTSIVPHLSRAAFIIDSTSASFETSPPKVIASPPDAS 798
TSCH*D FILI+NVS VIPALF+ SIVPHLSRAAFIIDSTSAS ETSPPKVIA P DAS
Sbjct: 590 TSCH*DXFILISNVSLVIPALFSRMSIVPHLSRAAFIIDSTSASLETSPPKVIA*PQDAS 411
Query: 799 ISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTGASSLVASFTIACSTA 978
+S ET+SASFEDRA*FTRTL PAFPRA A A PIPL+APVTTTTGASS VAS T ACS+A
Sbjct: 410 VSSETASASFEDRA*FTRTLQPAFPRANATAFPIPLEAPVTTTTGASSSVASCTHACSSA 231
Query: 979 ATWVCTPEN 1005
ATWV TPE+
Sbjct: 230 ATWVRTPED 204
Score = 227 bits (490), Expect(2) = 1e-059
Identities = 102/128 (79%), Positives = 108/128 (84%)
Frame = -3 / +1
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAA EQA V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 208 SGVRTHVAAEEQACVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 387
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
AE VS+E EAS G+AITFGGDVSKEADVESMMKAALDKWGTID+L+NNAGITRDTLLMRM
Sbjct: 388 AEAVSEETEASCGQAITFGGDVSKEADVESMMKAALDKWGTIDILLNNAGITRDTLLMRM 567
Query: 641 KKSQWQDV 618
K SQWQDV
Sbjct: 568 KXSQWQDV 591
Score = 203 bits (438), Expect = 2e-051
Identities = 83/128 (64%), Positives = 99/128 (77%)
Frame = +3 / -3
Query: 618 YVLPLRFLHPHQQCVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NISSEGDSLTTRCF 797
Y+LPLR LHPHQQC+ NPCII Q + CSPFI SCFHHR YISFF NISS+G+SLTTRCF
Sbjct: 591 YILPLRXLHPHQQCIPRNPCII*QDVNCSPFIKSCFHHRFYISFFRNISSKGNSLTTRCF 412
Query: 798 NLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQLGSIFYNCLFNS 977
+LF D FSLFRG I++ +LA+ FSK + ++PS T NNNNWSFQL SI + CLF S
Sbjct: 411 SLFRDCFSLFRGSCIIH*DLAASFSKSQCNSFSDPSGSTRNNNNWSFQLCSIVHACLFFS 232
Query: 978 GNMGLHTR 1001
++G HTR
Sbjct: 231 SDVGAHTR 208
Score = 149 bits (320), Expect = 3e-035
Identities = 71/116 (61%), Positives = 78/116 (67%)
Frame = -2 / +3
Query: 969 TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCPVLERG*RGLQRD*SI 790
TS RCY+AG CY C RD C WKS +QG +LC +LERG* L RD*SI
Sbjct: 240 TSMRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCTILERG*SSL*RD*SI 419
Query: 789 WW*GYHLRRRCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHIVDEDEEISVAR 622
W GY+L RRCF RS*CR+YDESSS *MGNN K*CRDY +I DEDE ISVAR
Sbjct: 420 LWSGYYLWRRCF*RS*CRIYDESSS**MGNN*HPAK*CRDYEGYIADEDEXISVAR 587
Score = 24.0 bits (46), Expect(2) = 1e-059
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3 / +1
Query: 1169 ASRRPLMXXXXXXXXXXXXXXXXXXXXXXXXXXXGFVTFGGGAARFS 1029
AS R LM GFV+FGG AAR S
Sbjct: 22 ASLRYLMGAATAAAVSSPAVTAPLPRAGSSSARRGFVSFGGAAARTS 162
>gb|CA023895.1|CA023895 HZ47L19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ47L19
5-PRIME, mRNA sequence
Length = 515
Score = 225 bits (485), Expect = 5e-058
Identities = 97/100 (97%), Positives = 99/100 (99%)
Frame = -3 / -1
Query: 503 NVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTI 324
N GQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEK+ILSTI
Sbjct: 515 NAGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKRILSTI 336
Query: 323 PLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
PLGRYGQPEEVAGLVEFLALNPAASY+TGQVLTIDGGMVM
Sbjct: 335 PLGRYGQPEEVAGLVEFLALNPAASYITGQVLTIDGGMVM 216
Score = 159 bits (341), Expect = 4e-038
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1 / +1
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
+ITIPPS+VSTCPV+*LAAG RA+NSTNPATSSG PYLP G+VDKI F AV+SD
Sbjct: 214 HITIPPSMVSTCPVM*LAAGFRAKNSTNPATSSGCPYLPKGIVDKILFSSSSPSSAVMSD 393
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
AMNPGAIAFTLIFLLAYSLATVFVK
Sbjct: 394 AMNPGAIAFTLIFLLAYSLATVFVK 468
Score = 148 bits (317), Expect = 8e-035
Identities = 59/104 (56%), Positives = 73/104 (70%)
Frame = +3 / +3
Query: 192 TQILHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGS 371
+++ HYHP+++ KHL + V+GQEL+QP NFLWL+I P N QD LLKL SKF
Sbjct: 204 SKVSHYHPTIDGKHLPGDVTGRRVQGQELNQPSNFLWLSIPPQGNSRQDSLLKLLSKFRG 383
Query: 372 HIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANI 503
H+ C E C+ IHIDI ACI P NCFCETN SSLG +ISL +I
Sbjct: 384 HV*CYESRCDCIHIDIPACIFPSNCFCETNDSSLGSTVISLTSI 515
Score = 144 bits (308), Expect = 1e-033
Identities = 60/101 (59%), Positives = 71/101 (70%)
Frame = -2 / -3
Query: 501 CWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTWRRA*EENLVNHS 322
CW S*L QGWS WFHKNSC G+CKQ+YQCEC T +H I +D TWR A*EENLV++S
Sbjct: 513 CWSS*LQCCQGWSHWFHKNSC*GICKQEYQCECNRTWIHSIRHDRGTWRGA*EENLVDYS 334
Query: 321 VREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
+ E+W RGSC VG V GP P L+ GAY+ DGNV+
Sbjct: 333 LGEVWTARGSCWVG*VLGPEPGGQLHHRAGAYHRWWDGNVK 211
Score = 109 bits (233), Expect = 3e-023
Identities = 59/100 (59%), Positives = 65/100 (65%)
Frame = +2 / +2
Query: 203 TLPSLRQL*APVQSYS*LRG*GPGTRPTLQLPLVGHISLTEWLTRFSSQALLQVRQSYQM 382
TLPS + *AP + + G GP T+PT QLPL H S E TRFSSQA LQV +S M
Sbjct: 215 TLPSHHRW*APAR*CNWPPGSGPRTQPTQQLPLAVHTSPRE*STRFSSQAPLQVPRSCLM 394
Query: 383 Q*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQH 502
* V+ HSH*Y CLH P QLFL*NQ LQPW N*L QH
Sbjct: 395 L*IQVRLHSH*YSCLHIP*QLFL*NQ*LQPWQHCN*LDQH 514
Score = 107 bits (228), Expect = 1e-022
Identities = 55/96 (57%), Positives = 62/96 (64%)
Frame = -1 / -2
Query: 487 IIAQPRLE*LVSQKQLPGSMQAEISM*MLLHQGSLHLI*LPNLEKSLRRKSCQPFR*GDM 308
I PRLE LVSQKQL G+MQA ISM*M H S H * NLE+SLRR+SC+ F G M
Sbjct: 499 ITVLPRLESLVSQKQLLGNMQAGISM*MQSHLDS*HQT*PRNLERSLRRESCRLFPWGGM 320
Query: 307 ANQRKLQGWSSSWPLTPQLAI*LDRCLQLTEGW*CK 200
+QRKL GW SSWP T + RCL GW*C+
Sbjct: 319 DSQRKLLGWLSSWP*TRRPVTSPGRCLPSMVGW*CE 212
>gb|CK125619.1|CK125619 BES1824109e02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E029 5-PRIME, mRNA sequence
Length = 598
Score = 154 bits (330), Expect(3) = 3e-054
Identities = 68/80 (85%), Positives = 70/80 (87%)
Frame = +1 / -1
Query: 763 PPKVIASPPDASISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTGASS 942
PPKVIA PPDASIS ET+SASFEDRA*FTRTL PAFPRA A A PIPL+APVTTTTGASS
Sbjct: 460 PPKVIA*PPDASISSETASASFEDRA*FTRTLQPAFPRANATAFPIPLEAPVTTTTGASS 281
Query: 943 LVASFTIACSTAATWVCTPE 1002
VAS T ACSTAATWV TPE
Sbjct: 280 SVASCTTACSTAATWVRTPE 221
Score = 131 bits (280), Expect(4) = 3e-052
Identities = 60/80 (75%), Positives = 65/80 (81%)
Frame = -3 / +3
Query: 1001 SGVQTHVAAVEQAIVKDATKLEAPVVVVTGASRXXXXXXXXXXXXXGCKVLVNYARSSKE 822
SGV+THVAAVEQA+V DAT+LEAPVVVVTGASR GCKVLVNYARSSKE
Sbjct: 222 SGVRTHVAAVEQAVVHDATELEAPVVVVTGASRGIGKAVALALGKAGCKVLVNYARSSKE 401
Query: 821 AEEVSKEIEASGGEAITFGG 762
AE VS+EIEASGG+AITFGG
Sbjct: 402 AEAVSEEIEASGGQAITFGG 461
Score = 117 bits (250), Expect(2) = 2e-039
Identities = 49/84 (58%), Positives = 62/84 (73%)
Frame = +3 / -3
Query: 765 SEGDSLTTRCFNLFGDLFSLFRGPGIVYQNLASCFSKG*SSCLTNPSRCTCNNNNWSFQL 944
S+G+SLTTRCFNLF D FSLFRG I++ +LA+ FSK + ++PS T NNNNWSFQL
Sbjct: 458 SKGNSLTTRCFNLFRDCFSLFRGSCIIH*DLAASFSKSQCNSFSDPSGSTRNNNNWSFQL 279
Query: 945 GSIFYNCLFNSGNMGLHTREPTAG 1016
SI ++CLFNS ++G HTR G
Sbjct: 278 CSIVHDCLFNSSDVGAHTRGEAGG 207
Score = 101 bits (216), Expect(2) = 2e-031
Identities = 46/87 (52%), Positives = 54/87 (62%)
Frame = -2 / +2
Query: 1014 RPWVLWCANPCCRC*TSNCKRCYQAGXXXXXCYRCI*RDW*GNCSSPWKSRMQGSGKLCP 835
R +LWCA+P C*TS+ RCY+AG CY C RD C WKS +QG +LC
Sbjct: 209 RRLLLWCAHPRRCC*TSSRARCYRAGSSSCCCYGCFQRDRKSCCIGSWKSWLQGPSELCT 388
Query: 834 VLERG*RGLQRD*SIWW*GYHLRRRCF 754
+LERG* L RD*SIWW GY+L R F
Sbjct: 389 ILERG*SSL*RD*SIWWSGYYLWRXMF 469
Score = 80.8 bits (170), Expect(4) = 3e-052
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = -3 / +1
Query: 761 DVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTL 654
DVSKEADVESMMKAALDKWGTID+LVNN G TRDTL
Sbjct: 463 DVSKEADVESMMKAALDKWGTIDILVNNXGXTRDTL 570
Score = 69.8 bits (146), Expect(3) = 3e-054
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = +1 / -3
Query: 652 NNVSRVIPALFTSTSIVPHLSRAAFIIDSTSASFETSPPK 771
NNVS V P LFT SIVPHLSRAAFIIDSTSAS ETS K
Sbjct: 572 NNVSLVXPXLFTRMSIVPHLSRAAFIIDSTSASLETSXSK 453
Score = 65.7 bits (137), Expect(2) = 2e-039
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +3 / -2
Query: 651 QQCVSCNPCIIYQHIYCSPFI*SCFHHRLYISFF*NI 761
+QC+ P IIYQ + CSPFI SCFHHR YISFF NI
Sbjct: 573 KQCIPRXPXIIYQDVNCSPFIKSCFHHRFYISFFRNI 463
Score = 54.7 bits (113), Expect(2) = 2e-031
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -2 / +3
Query: 762 RCFKRS*CRVYDESSSR*MGNNRCAGK*CRDYTRHIV 652
RCF RS*CR+YDESSS *MGNN GK* R Y +IV
Sbjct: 462 RCF*RS*CRIYDESSS**MGNN*HPGK*XRXYEGYIV 572
Score = 27.6 bits (54), Expect(3) = 3e-054
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 627 PLRFLHPHQ 653
PLRFLHPHQ
Sbjct: 598 PLRFLHPHQ 572
Score = 25.8 bits (50), Expect(4) = 3e-052
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / +2
Query: 674 GITRDTLLMRMKKSQW 627
GI LMRMKKSQW
Sbjct: 551 GIRGIHCLMRMKKSQW 598
Score = 24.9 bits (48), Expect(4) = 3e-052
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = -3 / +3
Query: 1169 ASRRPLMXXXXXXXXXXXXXXXXXXXXXXXXXXXGFVTFGGGAARFS 1029
AS R LM GFV+FGG AAR S
Sbjct: 36 ASLRYLMAAATAAAVSSPAVTAPLPRAASSSARRGFVSFGGAAARTS 176
>gb|AL500851.1|AL500851 AL500851 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02C02u 3', mRNA sequence
Length = 653
Score = 200 bits (431), Expect(2) = 3e-051
Identities = 86/90 (95%), Positives = 89/90 (98%)
Frame = -3 / -2
Query: 473 KAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKKILSTIPLGRYGQPEE 294
+ GVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEK+ILSTIPLGRYGQPEE
Sbjct: 520 RPGVIGFTKTVAREYASRNINVNAIAPGFIASDMTAELGEELEKRILSTIPLGRYGQPEE 341
Query: 293 VAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
VAGLVEFLALNPAASY+TGQVLTIDGGMVM
Sbjct: 340 VAGLVEFLALNPAASYITGQVLTIDGGMVM 251
Score = 159 bits (341), Expect = 4e-038
Identities = 68/85 (80%), Positives = 74/85 (87%)
Frame = +1 / +3
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
+ITIPPS+VSTCPV+*LAAG RA+NSTNPATSSG PYLP G+VDKI F AV+SD
Sbjct: 249 HITIPPSMVSTCPVM*LAAGFRAKNSTNPATSSGCPYLPKGIVDKILFSSSSPSSAVMSD 428
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
AMNPGAIAFTLIFLLAYSLATVFVK
Sbjct: 429 AMNPGAIAFTLIFLLAYSLATVFVK 503
Score = 133 bits (284), Expect = 3e-030
Identities = 52/92 (56%), Positives = 64/92 (69%)
Frame = +3 / +2
Query: 192 TQILHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGS 371
+++ HYHP+++ KHL + V+GQEL+QP NFLWL+I P N QD LLKL SKF
Sbjct: 239 SKVSHYHPTIDGKHLPGDVTGRRVQGQELNQPSNFLWLSIPPQGNSRQDSLLKLLSKFRG 418
Query: 372 HIRCNEPWCNSIHIDISACILPGNCFCETNHS 467
H+ C E C+ IHIDI ACI P NCFCETN S
Sbjct: 419 HV*CYESRCDCIHIDIPACIFPSNCFCETNDS 514
Score = 130 bits (278), Expect = 2e-029
Identities = 53/92 (57%), Positives = 65/92 (70%)
Frame = -2 / -1
Query: 474 QGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YDCRTWRRA*EENLVNHSVREIWPTRG 295
+ WS WFHKNSC G+CKQ+YQCEC T +H I +D TWR A*EENLV++S+ E+W RG
Sbjct: 521 KAWSHWFHKNSC*GICKQEYQCECNRTWIHSIRHDRGTWRGA*EENLVDYSLGEVWTARG 342
Query: 294 SCRVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
SC VG V GP P L+ GAY+ DGNV+
Sbjct: 341 SCWVG*VLGPEPGGQLHHRAGAYHRWWDGNVK 246
Score = 101 bits (215), Expect = 9e-021
Identities = 52/90 (57%), Positives = 59/90 (65%)
Frame = -1 / -3
Query: 469 LE*LVSQKQLPGSMQAEISM*MLLHQGSLHLI*LPNLEKSLRRKSCQPFR*GDMANQRKL 290
LE LVSQKQL G+MQA ISM*M H S H * NLE+SLRR+SC+ F G M +QRKL
Sbjct: 516 LESLVSQKQLLGNMQAGISM*MQSHLDS*HQT*PRNLERSLRRESCRLFPWGGMDSQRKL 337
Query: 289 QGWSSSWPLTPQLAI*LDRCLQLTEGW*CK 200
GW SSWP T + RCL GW*C+
Sbjct: 336 LGWLSSWP*TRRPVTSPGRCLPSMVGW*CE 247
Score = 22.6 bits (43), Expect(2) = 3e-051
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = -2 / -3
Query: 516 WSYWQC 499
W YWQC
Sbjct: 567 WXYWQC 550
>gb|AJ460556.1|AJ460556 AJ460556 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200056F05F1, mRNA sequence
Length = 180
Score = 133 bits (286), Expect = 1e-030
Identities = 57/59 (96%), Positives = 59/59 (100%)
Frame = -3 / +3
Query: 380 SDMTAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
SDMTAELGEELEK+ILSTIPLGRYGQPEEVAGLVEFLALNPAASY+TGQVLTIDGGMVM
Sbjct: 3 SDMTAELGEELEKRILSTIPLGRYGQPEEVAGLVEFLALNPAASYITGQVLTIDGGMVM 179
Score = 103 bits (219), Expect = 3e-021
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = +1 / -3
Query: 205 ITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
ITIPPS+VSTCPV+*LAAG RA+NSTNPATSSG PYLP G+VDKI F AV+SD
Sbjct: 178 ITIPPSMVSTCPVM*LAAGFRAKNSTNPATSSGCPYLPKGIVDKILFSSSSPSSAVMSD 2
>gb|BQ768195.1|BQ768195 EBro08_SQ011_A05 _R root, 3 week, drought-stressed, cv Optic,
EBro08 Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_A05 5', mRNA sequence
Length = 713
Score = 72.5 bits (152), Expect(2) = 5e-028
Identities = 30/57 (52%), Positives = 40/57 (70%)
Frame = -3 / +2
Query: 539 IINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMT 369
IINI+S G+ GN GQ NYS AK GV+G TKTVA+E+ + + N IA G+I + +T
Sbjct: 515 IINISSTSGIHGNAGQINYSTAKMGVLGMTKTVAKEWGTFGVRCNCIAFGYIETRLT 685
Score = 72.5 bits (152), Expect(2) = 5e-028
Identities = 31/92 (33%), Positives = 54/92 (58%)
Frame = -3 / +2
Query: 821 AEEVSKEIEASGGEAITFGGDVSKEADVESMMKAALDKWGTIDVLVNNAGITRDTLLMRM 642
A V+ EI A+GG+AI GDV+ + + ++K ++K+G +++LVNNAG T D ++ +
Sbjct: 200 ASNVAHEIRAAGGQAIHVTGDVTDPSFPDRILKVTIEKFGKLNILVNNAGYTWDGVIHKT 379
Query: 641 KKSQWQDVIDLNLTGVFLCTQAATKVMMKKRK 546
QW+ + ++ T F +AAT + K
Sbjct: 380 TDQQWEAMFKVHCTAPFRLIRAATPYLRDASK 475
>gb|AJ433965.1|AJ433965 AJ433965 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200066F07F1, mRNA sequence
Length = 338
Score = 125 bits (267), Expect = 6e-028
Identities = 53/56 (94%), Positives = 56/56 (100%)
Frame = -3 / +2
Query: 371 TAELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
+AELGEELEK+ILSTIPLGRYGQPEEVAGLVEFLALNPAASY+TGQVLTIDGGMVM
Sbjct: 2 SAELGEELEKRILSTIPLGRYGQPEEVAGLVEFLALNPAASYITGQVLTIDGGMVM 169
>gb|BF065145.2|BF065145 HV_CEb0023I02f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023I02f, mRNA sequence
Length = 567
Score = 116 bits (247), Expect = 3e-025
Identities = 51/69 (73%), Positives = 56/69 (81%)
Frame = +1 / -2
Query: 796 SISLETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTGASSLVASFTIACST 975
S+S E++SAS EDRA*FTRT PA PRA A A PIP++APVTT TGASS VAS T ACST
Sbjct: 566 SVSTESASASIEDRA*FTRTSQPAXPRANATAFPIPVEAPVTTPTGASSSVASCTTACST 387
Query: 976 AATWVCTPE 1002
AATWV TPE
Sbjct: 386 AATWVRTPE 360
>gb|BQ755185.1|BQ755185 EBed02_SQ003_P18_R endosperm, 8 DPA, no treatment, cv Optic, EBed02
Hordeum vulgare subsp. vulgare cDNA clone
EBed02_SQ003_P18 5', mRNA sequence
Length = 381
Score = 102 bits (218), Expect(2) = 9e-024
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +1 / -2
Query: 808 ETSSASFEDRA*FTRTLHPAFPRARAVALPIPLDAPVTTTTGASSLVASFTIAC 969
ET+SASFEDRA*FTRTL PAFPRA A A PIPL+APVTTTTGASS VAS T AC
Sbjct: 380 ETASASFEDRA*FTRTLQPAFPRANATAFPIPLEAPVTTTTGASSSVASCTTAC 219
Score = 28.1 bits (55), Expect(2) = 9e-024
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +1 / -1
Query: 970 STAATWVCTPENPR 1011
STAATWV TPE R
Sbjct: 219 STAATWVRTPEESR 178
>gb|BJ474443.1|BJ474443 BJ474443 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13n01 3', mRNA sequence
Length = 640
Score = 89.5 bits (189), Expect(2) = 2e-021
Identities = 40/98 (40%), Positives = 58/98 (59%)
Frame = -3 / -1
Query: 545 GKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTA 366
G I+NI+S+ G G G A YS K G+ T+++A E+A I VN +APG SDM +
Sbjct: 619 GSIVNISSLGGTLGFTGLALYSMTKGGINQLTRSLATEWAQNKIRVNCVAPGATKSDMLS 440
Query: 365 ELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAA 252
L E+ + L+ P+ R G+P EVA +V FL + A+
Sbjct: 439 SLPLEIRENELARTPMRRAGEPAEVAAMVSFLCMPAAS 326
Score = 33.1 bits (66), Expect(2) = 2e-021
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3 / -1
Query: 260 PAASYMTGQVLTIDGG 213
PAAS++TGQV+ +DGG
Sbjct: 337 PAASFVTGQVIAVDGG 290
>gb|BJ475210.1|BJ475210 BJ475210 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24d05 3', mRNA sequence
Length = 584
Score = 89.5 bits (189), Expect(2) = 2e-021
Identities = 40/98 (40%), Positives = 58/98 (59%)
Frame = -3 / -2
Query: 545 GKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMTA 366
G I+NI+S+ G G G A YS K G+ T+++A E+A I VN +APG SDM +
Sbjct: 481 GSIVNISSLGGTLGFTGLALYSMTKGGINQLTRSLATEWAQNKIRVNCVAPGATKSDMLS 302
Query: 365 ELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAA 252
L E+ + L+ P+ R G+P EVA +V FL + A+
Sbjct: 301 SLPLEIRENELARTPMRRAGEPAEVAAMVSFLCMPAAS 188
Score = 33.1 bits (66), Expect(2) = 2e-021
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -3 / -2
Query: 260 PAASYMTGQVLTIDGG 213
PAAS++TGQV+ +DGG
Sbjct: 199 PAASFVTGQVIAVDGG 152
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 553,396,856
Number of Sequences: 312970
Number of extensions: 9250858
Number of successful extensions: 74751
Number of sequences better than 1.0e-020: 33
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 15170049147
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)