TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493645.2.1
(870 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL508686.1|AL508686 AL508686 Hordeum vulgare Barke devel... 182 3e-045
gb|BU994250.1|BU994250 HM06G03r HM Hordeum vulgare subsp. v... 182 3e-045
gb|CA026804.1|CA026804 HZ57A07r HZ Hordeum vulgare subsp. v... 180 1e-044
gb|BM373175.2|BM373175 EBma04_SQ003_G08_R maternal, 10 DPA,... 179 2e-044
gb|BI780055.2|BI780055 EBma08_SQ001_E13_R maternal, 28 DPA,... 179 2e-044
gb|BM098046.2|BM098046 EBpi03_SQ002_G08_R pistil, 4 DPA, no... 179 2e-044
gb|BM098993.2|BM098993 EBpi05_SQ002_K09_R pistil, 8 DPA, no... 179 2e-044
gb|BQ753927.1|BQ753927 EBca01_SQ002_F11_R carpel, pre-anthe... 179 2e-044
gb|BQ754110.1|BQ754110 EBca01_SQ002_N22_R carpel, pre-anthe... 179 2e-044
gb|BQ764198.1|BQ764198 EBan01_SQ005_L04_R anther, yellow st... 179 2e-044
gb|BQ764791.1|BQ764791 EBca01_SQ004_M20_R carpel, pre-anthe... 179 2e-044
gb|BU975872.1|BU975872 HB32I24r BC Hordeum vulgare subsp. v... 179 2e-044
gb|BU978457.1|BU978457 HA13E16r HA Hordeum vulgare subsp. v... 179 2e-044
gb|BU980287.1|BU980287 HA20D19r HA Hordeum vulgare subsp. v... 179 2e-044
gb|CA022684.1|CA022684 HZ44B02r HZ Hordeum vulgare subsp. v... 179 2e-044
gb|CA022911.1|CA022911 HZ44L08r HZ Hordeum vulgare subsp. v... 179 2e-044
gb|CA028546.1|CA028546 HZ62G04r HZ Hordeum vulgare subsp. v... 179 2e-044
gb|CA029656.1|CA029656 HZ65N08r HZ Hordeum vulgare subsp. v... 179 2e-044
gb|CB880531.1|CB880531 HM06N12w HM Hordeum vulgare subsp. v... 179 2e-044
gb|BU994374.1|BU994374 HM06N12r HM Hordeum vulgare subsp. v... 179 2e-044
gb|BU997620.1|BU997620 HI08I07r HI Hordeum vulgare subsp. v... 179 2e-044
gb|BM098908.2|BM098908 EBpi05_SQ002_G12_R pistil, 8 DPA, no... 178 3e-044
gb|BU975051.1|BU975051 HB29P04r BC Hordeum vulgare subsp. v... 178 3e-044
gb|BU994808.1|BU994808 HM08E07r HM Hordeum vulgare subsp. v... 178 3e-044
gb|CB858217.1|CB858217 HI06D07w HI Hordeum vulgare subsp. v... 178 3e-044
gb|CB858852.1|CB858852 HI08I07w HI Hordeum vulgare subsp. v... 178 3e-044
gb|CB880383.1|CB880383 HM06G03w HM Hordeum vulgare subsp. v... 178 3e-044
gb|CB880930.1|CB880930 HM08E07w HM Hordeum vulgare subsp. v... 178 3e-044
gb|CV058614.1|CV058614 BNEL39h8 Barley EST endosperm librar... 178 3e-044
gb|AL511860.1|AL511860 AL511860 Hordeum vulgare Barke devel... 176 2e-043
gb|CB881483.1|CB881483 HM09P06w HM Hordeum vulgare subsp. v... 171 3e-042
gb|BU995345.1|BU995345 HM09P06r HM Hordeum vulgare subsp. v... 166 1e-040
gb|BI959740.1|BI959740 HVSMEn0021C07f Hordeum vulgare rachi... 166 2e-040
gb|CA027576.1|CA027576 HZ59F20r HZ Hordeum vulgare subsp. v... 165 4e-040
gb|CB881452.1|CB881452 HM09N21w HM Hordeum vulgare subsp. v... 156 2e-037
gb|CA028887.1|CA028887 HZ63I15r HZ Hordeum vulgare subsp. v... 144 5e-034
gb|BU995314.1|BU995314 HM09N21r HM Hordeum vulgare subsp. v... 135 3e-031
gb|BU998168.1|BU998168 HI10D06r HI Hordeum vulgare subsp. v... 108 6e-024
gb|BU998403.1|BU998403 HI10P04r HI Hordeum vulgare subsp. v... 108 6e-024
gb|BM377991.2|BM377991 EBem04_SQ004_N05_R embryo, 12 DPA, n... 108 6e-024
gb|BM376425.2|BM376425 EBem05_SQ002_D02_R embryo, 14 DPA, n... 108 6e-024
gb|BM377308.2|BM377308 EBem05_SQ004_L23_R embryo, 14 DPA, n... 108 6e-024
gb|BM376797.2|BM376797 EBem05_SQ003_E08_R embryo, 14 DPA, n... 108 6e-024
gb|BM375116.2|BM375116 EBem06_SQ002_G06_R embryo, 21 DPA, n... 107 1e-023
gb|BM375345.2|BM375345 EBem06_SQ003_B05_R embryo, 21 DPA, n... 108 4e-023
gb|BM373681.2|BM373681 EBma03_SQ002_F06_R maternal, 8 DPA, ... 108 4e-023
gb|BM369802.2|BM369802 EBem07_SQ004_K12_R embryo, 28 DPA, n... 105 7e-023
gb|BI957563.1|BI957563 HVSMEn0010C16f Hordeum vulgare rachi... 106 2e-022
gb|BU996885.1|BU996885 HI06D07r HI Hordeum vulgare subsp. v... 106 2e-022
>gb|AL508686.1|AL508686 AL508686 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09I02V 5',
mRNA sequence
Length = 616
Score = 182 bits (391), Expect = 3e-045
Identities = 68/98 (69%), Positives = 72/98 (73%)
Frame = +2 / -3
Query: 224 NMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGIC 403
+ +P TA +LRV+MAGS CDGKC VRCSKASRHDDCLKYCGIC
Sbjct: 596 SFEPPTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGIC 417
Query: 404 CATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
CA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 416 CAECNCVPSGTAGNKDECPCYRDKTTGHGARXRPKCP* 303
Score = 138 bits (295), Expect(2) = 1e-032
Identities = 61/97 (62%), Positives = 65/97 (67%)
Frame = -1 / +1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 307 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 486
Query: 333 SQNPDPAMXXXXXXXXXXXXXXXXRPATLAVAAGFML 223
SQ+ DPAM +AV G L
Sbjct: 487 SQSADPAMATRRVEAARRTRRRRRARVVVAVVGGSKL 597
Score = 129 bits (276), Expect = 2e-029
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +1 / -2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 510 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 331
Query: 490 QPHQAQVPLM 519
+ AQVP++
Sbjct: 330 RAQXAQVPMI 301
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / +3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 387 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 512
Score = 57.9 bits (120), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / +2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 290 GGGSIMGTWAXCARRGRWSCRGSRGTRPCC 379
Score = 24.4 bits (47), Expect(2) = 1e-032
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3 / +1
Query: 859 FFFFFLHLVAVPKPRVCTYY 800
FFFFF H+V V T++
Sbjct: 10 FFFFFRHIVVVHYHSTRTFF 69
>gb|BU994250.1|BU994250 HM06G03r HM Hordeum vulgare subsp. vulgare cDNA clone HM06G03
5-PRIME, mRNA sequence
Length = 604
Score = 182 bits (391), Expect = 3e-045
Identities = 72/127 (56%), Positives = 81/127 (63%)
Frame = +2 / +1
Query: 137 TPGTPASLTPQTTSHARSSRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMA 316
TP P + + S+A + + ++ TA +LRV+MA
Sbjct: 46 TPPAPLVSSSHQPAGLCQSQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMA 225
Query: 317 GSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNR 496
GS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R
Sbjct: 226 GSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGAR 405
Query: 497 TRPKCP* 517
RPKCP*
Sbjct: 406 KRPKCP* 426
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 422 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 243
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 242 SQSADPAM 219
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 219 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 398
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 399 RAQEAQVPMI 428
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 342 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 217
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 439 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 350
>gb|CA026804.1|CA026804 HZ57A07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57A07
5-PRIME, mRNA sequence
Length = 392
Score = 180 bits (387), Expect = 1e-044
Identities = 71/125 (56%), Positives = 80/125 (64%)
Frame = +2 / +1
Query: 143 GTPASLTPQTTSHARSSRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGS 322
G P + + S+A + + ++ TA +LRV+MAGS
Sbjct: 1 GAPLVSSSHQPAGLCQSQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGS 180
Query: 323 GFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTR 502
CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R R
Sbjct: 181 ALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKR 360
Query: 503 PKCP* 517
PKCP*
Sbjct: 361 PKCP* 375
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 371 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 192
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 191 SQSADPAM 168
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 168 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 347
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 348 RAQEAQVPMI 377
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 291 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 166
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 388 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 299
>gb|BM373175.2|BM373175 EBma04_SQ003_G08_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ003_G08 5', mRNA sequence
Length = 557
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +2
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 29 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 208
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 209 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 355
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 351 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 172
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 171 SQSADPAM 148
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 148 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 327
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 328 RAQEAQVPMI 357
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 271 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 146
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 368 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 279
>gb|BI780055.2|BI780055 EBma08_SQ001_E13_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_E13 5', mRNA sequence
Length = 534
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +2
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 29 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 208
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 209 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 355
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 351 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 172
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 171 SQSADPAM 148
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 148 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 327
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 328 RAQEAQVPMI 357
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 271 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 146
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 368 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 279
>gb|BM098046.2|BM098046 EBpi03_SQ002_G08_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ002_G08 5', mRNA sequence
Length = 578
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +2
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 35 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 214
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 215 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 361
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 357 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 178
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 177 SQSADPAM 154
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 154 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 333
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 334 RAQEAQVPMI 363
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 277 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 152
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 374 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 285
>gb|BM098993.2|BM098993 EBpi05_SQ002_K09_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_K09 5', mRNA sequence
Length = 547
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +3
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 48 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 227
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 228 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 374
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 370 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 191
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 190 SQSADPAM 167
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 167 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 346
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 347 RAQEAQVPMI 376
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 290 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 165
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 387 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 298
>gb|BQ753927.1|BQ753927 EBca01_SQ002_F11_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ002_F11 5', mRNA sequence
Length = 511
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +3
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 45 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 224
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 225 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 371
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 367 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 188
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 187 SQSADPAM 164
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 164 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 343
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 344 RAQEAQVPMI 373
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 287 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 162
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 384 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 295
>gb|BQ754110.1|BQ754110 EBca01_SQ002_N22_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ002_N22 5', mRNA sequence
Length = 453
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +2
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 41 SQATLKNTAMKKLRTTTTATTTLALLLFLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 220
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 221 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 367
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 363 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 184
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 183 SQSADPAM 160
Score = 127 bits (271), Expect = 1e-028
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQ RVP+LPR DHR R
Sbjct: 160 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQRRVPLLPRQDHRPR 339
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 340 RAQEAQVPMI 369
Score = 79.0 bits (166), Expect(2) = 3e-024
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 283 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 158
Score = 52.8 bits (109), Expect(2) = 3e-024
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTR CC
Sbjct: 380 GGGSIMGTWASCARRGRWSCRGSRGTRLCC 291
>gb|BQ764198.1|BQ764198 EBan01_SQ005_L04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_L04 5', mRNA sequence
Length = 472
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +1
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 37 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 216
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 217 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 363
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 359 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 180
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 179 SQSADPAM 156
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 156 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 335
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 336 RAQEAQVPMI 365
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 279 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 154
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 376 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 287
>gb|BQ764791.1|BQ764791 EBca01_SQ004_M20_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_M20 5', mRNA sequence
Length = 655
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +2
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 41 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 220
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 221 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 367
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 363 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 184
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 183 SQSADPAM 160
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 160 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 339
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 340 RAQEAQVPMI 369
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 283 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 158
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 380 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 291
>gb|BU975872.1|BU975872 HB32I24r BC Hordeum vulgare subsp. vulgare cDNA clone HB32I24
5-PRIME, mRNA sequence
Length = 501
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +1
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 61 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 240
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 241 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 387
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 383 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 204
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 203 SQSADPAM 180
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 180 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 359
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 360 RAQEAQVPMI 389
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 303 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 178
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 400 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 311
>gb|BU978457.1|BU978457 HA13E16r HA Hordeum vulgare subsp. vulgare cDNA clone HA13E16
5-PRIME, mRNA sequence
Length = 557
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +1
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 58 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 237
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 238 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 384
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 380 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 201
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 200 SQSADPAM 177
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 177 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 356
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 357 RAQEAQVPMI 386
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 300 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 175
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 397 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 308
>gb|BU980287.1|BU980287 HA20D19r HA Hordeum vulgare subsp. vulgare cDNA clone HA20D19
5-PRIME, mRNA sequence
Length = 516
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +1
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 55 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 234
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 235 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 381
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 377 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 198
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 197 SQSADPAM 174
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 174 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 353
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 354 RAQEAQVPMI 383
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 297 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 172
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 394 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 305
>gb|CA022684.1|CA022684 HZ44B02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44B02
5-PRIME, mRNA sequence
Length = 609
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +1
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 55 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 234
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 235 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 381
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 377 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 198
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 197 SQSADPAM 174
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 174 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 353
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 354 RAQEAQVPMI 383
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 297 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 172
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 394 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 305
>gb|CA022911.1|CA022911 HZ44L08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44L08
5-PRIME, mRNA sequence
Length = 611
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +2
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 56 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 235
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 236 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 382
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 378 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 199
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 198 SQSADPAM 175
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 175 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 354
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 355 RAQEAQVPMI 384
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 298 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 173
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 395 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 306
>gb|CA028546.1|CA028546 HZ62G04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62G04
5-PRIME, mRNA sequence
Length = 495
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +1
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 55 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 234
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 235 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 381
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 377 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 198
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 197 SQSADPAM 174
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 174 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 353
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 354 RAQEAQVPMI 383
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 297 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 172
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 394 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 305
>gb|CA029656.1|CA029656 HZ65N08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65N08
5-PRIME, mRNA sequence
Length = 551
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / +2
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 47 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 226
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 227 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 373
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 369 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 190
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 189 SQSADPAM 166
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 166 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 345
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 346 RAQEAQVPMI 375
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 289 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 164
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 386 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 297
>gb|CB880531.1|CB880531 HM06N12w HM Hordeum vulgare subsp. vulgare cDNA clone HM06N12
3-PRIME, mRNA sequence
Length = 624
Score = 179 bits (386), Expect = 2e-044
Identities = 69/109 (63%), Positives = 76/109 (69%)
Frame = +2 / -3
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 592 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 413
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
HDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 412 HDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 266
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / +3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 270 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 449
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 450 SQSADPAM 473
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / -2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 473 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 294
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 293 RAQEAQVPMI 264
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / +2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 350 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 475
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / +1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 253 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 342
>gb|BU994374.1|BU994374 HM06N12r HM Hordeum vulgare subsp. vulgare cDNA clone HM06N12
5-PRIME, mRNA sequence
Length = 569
Score = 179 bits (385), Expect = 2e-044
Identities = 67/97 (69%), Positives = 71/97 (73%)
Frame = +2 / +1
Query: 227 MKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICC 406
++ TA +LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICC
Sbjct: 28 LRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICC 207
Query: 407 ATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
A CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 208 AECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 318
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 314 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 135
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 134 SQSADPAM 111
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 111 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 290
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 291 RAQEAQVPMI 320
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 234 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 109
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 331 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 242
>gb|BU997620.1|BU997620 HI08I07r HI Hordeum vulgare subsp. vulgare cDNA clone HI08I07
5-PRIME, mRNA sequence
Length = 483
Score = 179 bits (385), Expect = 2e-044
Identities = 67/97 (69%), Positives = 71/97 (73%)
Frame = +2 / +3
Query: 227 MKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICC 406
++ TA +LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICC
Sbjct: 15 LRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICC 194
Query: 407 ATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
A CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 195 AECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 305
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 301 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 122
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 121 SQSADPAM 98
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 98 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 277
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 278 RAQEAQVPMI 307
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 221 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 96
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 318 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 229
>gb|BM098908.2|BM098908 EBpi05_SQ002_G12_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ002_G12 5', mRNA sequence
Length = 622
Score = 178 bits (384), Expect = 3e-044
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2 / +3
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
+LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD
Sbjct: 153 TLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDK 332
Query: 476 TTGHGNRTRPKCP* 517
TTGHG R RPKCP*
Sbjct: 333 TTGHGARKRPKCP* 374
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 370 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 191
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 190 SQSADPAM 167
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 167 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 346
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 347 RAQEAQVPMI 376
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 290 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 165
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 387 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 298
>gb|BU975051.1|BU975051 HB29P04r BC Hordeum vulgare subsp. vulgare cDNA clone HB29P04
5-PRIME, mRNA sequence
Length = 546
Score = 178 bits (384), Expect = 3e-044
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2 / +3
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
+LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD
Sbjct: 42 TLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDK 221
Query: 476 TTGHGNRTRPKCP* 517
TTGHG R RPKCP*
Sbjct: 222 TTGHGARKRPKCP* 263
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 259 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 80
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 79 SQSADPAM 56
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 56 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 235
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 236 RAQEAQVPMI 265
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 179 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 54
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 276 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 187
>gb|BU994808.1|BU994808 HM08E07r HM Hordeum vulgare subsp. vulgare cDNA clone HM08E07
5-PRIME, mRNA sequence
Length = 499
Score = 178 bits (384), Expect = 3e-044
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2 / +2
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
+LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD
Sbjct: 44 TLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDK 223
Query: 476 TTGHGNRTRPKCP* 517
TTGHG R RPKCP*
Sbjct: 224 TTGHGARKRPKCP* 265
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 261 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 82
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 81 SQSADPAM 58
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 58 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 237
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 238 RAQEAQVPMI 267
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 181 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 56
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 278 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 189
>gb|CB858217.1|CB858217 HI06D07w HI Hordeum vulgare subsp. vulgare cDNA clone HI06D07
3-PRIME, mRNA sequence
Length = 540
Score = 178 bits (384), Expect = 3e-044
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2 / -1
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
+LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD
Sbjct: 510 TLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDK 331
Query: 476 TTGHGNRTRPKCP* 517
TTGHG R RPKCP*
Sbjct: 330 TTGHGARKRPKCP* 289
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / +2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 293 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 472
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 473 SQSADPAM 496
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / -3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 496 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 317
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 316 RAQEAQVPMI 287
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / +1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 373 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 498
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / +3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 276 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 365
>gb|CB858852.1|CB858852 HI08I07w HI Hordeum vulgare subsp. vulgare cDNA clone HI08I07
3-PRIME, mRNA sequence
Length = 520
Score = 178 bits (384), Expect = 3e-044
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2 / -2
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
+LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD
Sbjct: 510 TLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDK 331
Query: 476 TTGHGNRTRPKCP* 517
TTGHG R RPKCP*
Sbjct: 330 TTGHGARKRPKCP* 289
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / +2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 293 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 472
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 473 SQSADPAM 496
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / -1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 496 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 317
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 316 RAQEAQVPMI 287
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / +1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 373 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 498
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / +3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 276 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 365
>gb|CB880383.1|CB880383 HM06G03w HM Hordeum vulgare subsp. vulgare cDNA clone HM06G03
3-PRIME, mRNA sequence
Length = 565
Score = 178 bits (384), Expect = 3e-044
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2 / -3
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
+LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD
Sbjct: 500 TLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDK 321
Query: 476 TTGHGNRTRPKCP* 517
TTGHG R RPKCP*
Sbjct: 320 TTGHGARKRPKCP* 279
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / +1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 283 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 462
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 463 SQSADPAM 486
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / -2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 486 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 307
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 306 RAQEAQVPMI 277
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / +3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 363 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 488
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / +2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 266 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 355
>gb|CB880930.1|CB880930 HM08E07w HM Hordeum vulgare subsp. vulgare cDNA clone HM08E07
3-PRIME, mRNA sequence
Length = 552
Score = 178 bits (384), Expect = 3e-044
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2 / -3
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
+LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD
Sbjct: 514 TLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDK 335
Query: 476 TTGHGNRTRPKCP* 517
TTGHG R RPKCP*
Sbjct: 334 TTGHGARKRPKCP* 293
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / +3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 297 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 476
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 477 SQSADPAM 500
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / -2
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 500 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 321
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 320 RAQEAQVPMI 291
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / +2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 377 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 502
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / +1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 280 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 369
>gb|CV058614.1|CV058614 BNEL39h8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL39h8 5' similar to
gibberellin-stimulated transcript 1 like protein - rice,
mRNA sequence
Length = 493
Score = 178 bits (384), Expect = 3e-044
Identities = 65/74 (87%), Positives = 67/74 (90%)
Frame = +2 / +2
Query: 296 SLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDM 475
+LRV+MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD
Sbjct: 146 TLRVAMAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDK 325
Query: 476 TTGHGNRTRPKCP* 517
TTGHG R RPKCP*
Sbjct: 326 TTGHGARKRPKCP* 367
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 363 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 184
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 183 SQSADPAM 160
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / +1
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 160 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 339
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 340 RAQEAQVPMI 369
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 283 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 158
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 380 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 291
>gb|AL511860.1|AL511860 AL511860 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09I02u 3',
mRNA sequence
Length = 579
Score = 176 bits (378), Expect = 2e-043
Identities = 66/100 (66%), Positives = 71/100 (71%)
Frame = +2 / +1
Query: 218 VGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCG 397
+ ++ TA +LRV+MAGS CDGKC VRCSKASRHD CLKYCG
Sbjct: 7 MNXLRTTTTAATTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASRHDXCLKYCG 186
Query: 398 ICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
ICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 187 ICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP* 306
Score = 134 bits (288), Expect = 5e-031
Identities = 56/68 (82%), Positives = 59/68 (86%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQ SCRLALEHLT HLP
Sbjct: 302 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQXSCRLALEHLTPHLP 123
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 122 SQSADPAM 99
Score = 127 bits (273), Expect = 6e-029
Identities = 52/70 (74%), Positives = 59/70 (84%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPAR LPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 99 HGWISALRRQVRGEVLQGEPARXLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 278
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 279 RAQEAQVPMI 308
Score = 79.0 bits (166), Expect(2) = 1e-025
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSHG 308
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSHG
Sbjct: 222 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSHG 97
Score = 57.4 bits (119), Expect(2) = 1e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 319 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 230
>gb|CB881483.1|CB881483 HM09P06w HM Hordeum vulgare subsp. vulgare cDNA clone HM09P06
3-PRIME, mRNA sequence
Length = 606
Score = 171 bits (369), Expect = 3e-042
Identities = 62/69 (89%), Positives = 62/69 (89%)
Frame = +2 / -1
Query: 311 MAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHG 490
MAGS CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG
Sbjct: 492 MAGSALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHG 313
Query: 491 NRTRPKCP* 517
R RPKCP*
Sbjct: 312 ARKRPKCP* 286
Score = 136 bits (292), Expect = 1e-031
Identities = 57/68 (83%), Positives = 60/68 (88%)
Frame = -1 / +2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 290 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 469
Query: 333 SQNPDPAM 310
SQ+ DPAM
Sbjct: 470 SQSADPAM 493
Score = 130 bits (279), Expect = 9e-030
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = +1 / -3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTR 489
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R
Sbjct: 493 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPR 314
Query: 490 QPHQAQVPLM 519
+ +AQVP++
Sbjct: 313 RAQEAQVPMI 284
Score = 76.2 bits (160), Expect(2) = 9e-025
Identities = 36/41 (87%), Positives = 36/41 (87%)
Frame = -3 / +1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SSH 311
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE *SSH
Sbjct: 370 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAER*SSH 492
Score = 57.4 bits (119), Expect(2) = 9e-025
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / +3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 273 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 362
>gb|BU995345.1|BU995345 HM09P06r HM Hordeum vulgare subsp. vulgare cDNA clone HM09P06
5-PRIME, mRNA sequence
Length = 489
Score = 166 bits (358), Expect = 1e-040
Identities = 60/68 (88%), Positives = 60/68 (88%)
Frame = +2 / +2
Query: 314 AGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGN 493
AG CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG
Sbjct: 2 AGYALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGA 181
Query: 494 RTRPKCP* 517
R RPKCP*
Sbjct: 182 RKRPKCP* 205
Score = 130 bits (278), Expect = 1e-029
Identities = 55/67 (82%), Positives = 58/67 (86%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 201 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 22
Query: 333 SQNPDPA 313
SQ+ PA
Sbjct: 21 SQSAYPA 1
Score = 129 bits (277), Expect = 2e-029
Identities = 53/69 (76%), Positives = 60/69 (86%)
Frame = +1 / +1
Query: 313 GWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTRQ 492
GWIR LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R+
Sbjct: 1 GWIRALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPRR 180
Query: 493 PHQAQVPLM 519
+AQVP++
Sbjct: 181 AQEAQVPMI 207
Score = 70.3 bits (147), Expect(2) = 5e-023
Identities = 34/40 (85%), Positives = 34/40 (85%)
Frame = -3 / -3
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAEP*SS 314
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE SS
Sbjct: 121 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAERVSS 2
Score = 57.4 bits (119), Expect(2) = 5e-023
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -2
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 218 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 129
>gb|BI959740.1|BI959740 HVSMEn0021C07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021C07f, mRNA sequence
Length = 699
Score = 166 bits (356), Expect = 2e-040
Identities = 59/67 (88%), Positives = 59/67 (88%)
Frame = +2 / +1
Query: 317 GSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNR 496
G CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R
Sbjct: 178 GGALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGAR 357
Query: 497 TRPKCP* 517
RPKCP*
Sbjct: 358 KRPKCP* 378
Score = 129 bits (277), Expect = 2e-029
Identities = 54/68 (79%), Positives = 58/68 (85%)
Frame = -1 / -2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 374 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 195
Query: 333 SQNPDPAM 310
SQ+ P +
Sbjct: 194 SQSAPPRL 171
Score = 121 bits (258), Expect = 7e-027
Identities = 50/68 (73%), Positives = 57/68 (83%)
Frame = +1 / +3
Query: 316 WIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTRQP 495
W LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R+
Sbjct: 177 WRSALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPRRA 356
Query: 496 HQAQVPLM 519
+AQVP++
Sbjct: 357 QEAQVPMI 380
Score = 69.3 bits (145), Expect(2) = 8e-022
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / -1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAE 326
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE
Sbjct: 294 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAE 187
Score = 54.2 bits (112), Expect(2) = 8e-022
Identities = 20/30 (66%), Positives = 20/30 (66%)
Frame = -2 / -3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSC GS GTRPCC
Sbjct: 391 GGGSIMGTWASCARRGRWSCLGSRGTRPCC 302
>gb|CA027576.1|CA027576 HZ59F20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ59F20
5-PRIME, mRNA sequence
Length = 384
Score = 165 bits (354), Expect = 4e-040
Identities = 59/66 (89%), Positives = 59/66 (89%)
Frame = +2 / +3
Query: 320 SGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRT 499
S CDGKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R
Sbjct: 3 SALCDGKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARK 182
Query: 500 RPKCP* 517
RPKCP*
Sbjct: 183 RPKCP* 200
Score = 129 bits (276), Expect = 2e-029
Identities = 54/65 (83%), Positives = 57/65 (87%)
Frame = -1 / -3
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 196 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 17
Query: 333 SQNPD 319
SQ+ D
Sbjct: 16 SQSAD 2
Score = 119 bits (254), Expect = 2e-026
Identities = 50/67 (74%), Positives = 57/67 (85%)
Frame = +1 / +2
Query: 319 IRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTRQPH 498
I LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R+
Sbjct: 2 ISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPRRAQ 181
Query: 499 QAQVPLM 519
+AQVP++
Sbjct: 182 EAQVPMI 202
Score = 69.3 bits (145), Expect(2) = 1e-022
Identities = 32/36 (88%), Positives = 32/36 (88%)
Frame = -3 / -2
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALAVAE 326
P RHAVA GAA PAVLEAVVVPARLGAPH ALAVAE
Sbjct: 116 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALAVAE 9
Score = 57.4 bits (119), Expect(2) = 1e-022
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / -1
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 213 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 124
>gb|CB881452.1|CB881452 HM09N21w HM Hordeum vulgare subsp. vulgare cDNA clone HM09N21
3-PRIME, mRNA sequence
Length = 479
Score = 156 bits (335), Expect = 2e-037
Identities = 56/61 (91%), Positives = 56/61 (91%)
Frame = +2 / -3
Query: 335 GKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP 514
GKC VRCSKASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKCP
Sbjct: 471 GKCGVRCSKASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKCP 292
Query: 515 * 517
*
Sbjct: 291 * 289
Score = 122 bits (261), Expect = 3e-027
Identities = 51/60 (85%), Positives = 53/60 (88%)
Frame = -1 / +2
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLP 334
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLP
Sbjct: 293 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLP 472
Score = 111 bits (237), Expect = 5e-024
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +1 / -2
Query: 337 QVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPMLPRHDHRTRQPHQAQVPL 516
QVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+LPR DHR R+ +AQVP+
Sbjct: 469 QVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLLPRQDHRPRRAQEAQVPM 290
Query: 517 M 519
+
Sbjct: 289 I 287
Score = 63.4 bits (132), Expect(2) = 6e-021
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = -3 / +1
Query: 433 PGRHAVAGGAADPAVLEAVVVPARLGAPHRALA 335
P RHAVA GAA PAVLEAVVVPARLGAPH ALA
Sbjct: 373 PRRHAVALGAAYPAVLEAVVVPARLGAPHPALA 471
Score = 57.4 bits (119), Expect(2) = 6e-021
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = -2 / +3
Query: 530 GMNIIRGTWAWCGCRVRWSCRGSMGTRPCC 441
G I GTWA C R RWSCRGS GTRPCC
Sbjct: 276 GGGSIMGTWASCARRGRWSCRGSRGTRPCC 365
>gb|CA028887.1|CA028887 HZ63I15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63I15
5-PRIME, mRNA sequence
Length = 318
Score = 144 bits (310), Expect = 5e-034
Identities = 55/92 (59%), Positives = 62/92 (67%)
Frame = +2 / +1
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 43 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 222
Query: 371 HDDCLKYCGICCATCNCVPSGTAGNKDECPCY 466
HDDCLKYCGICCA CNCVPSGTAGNKDECPCY
Sbjct: 223 HDDCLKYCGICCAECNCVPSGTAGNKDECPCY 318
Score = 107 bits (228), Expect = 1e-022
Identities = 45/52 (86%), Positives = 46/52 (88%)
Frame = -1 / -2
Query: 465 *HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLALEHLTAHLPSQNPDPAM 310
* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLALEHLT HLPSQ+ DPAM
Sbjct: 317 *QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLALEHLTPHLPSQSADPAM 162
Score = 103 bits (219), Expect = 2e-021
Identities = 43/52 (82%), Positives = 46/52 (88%)
Frame = +1 / +3
Query: 310 HGWIRVLRRQVRGEVLQGEPARRLPQVLRDLLRHLQLRAVRDRGQQGRVPML 465
HGWI LRRQVRGEVLQGEPARRLPQVLRD+LR +QLRAV D QQGRVP+L
Sbjct: 162 HGWISALRRQVRGEVLQGEPARRLPQVLRDMLRRVQLRAVGDGRQQGRVPLL 317
>gb|BU995314.1|BU995314 HM09N21r HM Hordeum vulgare subsp. vulgare cDNA clone HM09N21
5-PRIME, mRNA sequence
Length = 479
Score = 135 bits (290), Expect = 3e-031
Identities = 49/62 (79%), Positives = 52/62 (83%)
Frame = +2 / +1
Query: 332 DGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKC 511
+G+ +ASRHDDCLKYCGICCA CNCVPSGTAGNKDECPCYRD TTGHG R RPKC
Sbjct: 7 EGQVRGEVLQASRHDDCLKYCGICCAECNCVPSGTAGNKDECPCYRDKTTGHGARKRPKC 186
Query: 512 P* 517
P*
Sbjct: 187 P* 192
Score = 102 bits (217), Expect(2) = 4e-023
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -1 / -1
Query: 513 GHLGLVRLPCPVVMSR*HGHSSLLPAVPDGTQLQVAQQIPQYLRQSSCRLA 361
GHLGL+R P PVV+SR* GHSSLLPAVPDGTQL AQ IPQYLRQSSCRLA
Sbjct: 188 GHLGLLRAPWPVVLSR*QGHSSLLPAVPDGTQLHSAQHIPQYLRQSSCRLA 36
Score = 25.8 bits (50), Expect(2) = 4e-023
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / -1
Query: 359 WSTSPRTC 336
WSTSPRTC
Sbjct: 35 WSTSPRTC 12
>gb|BU998168.1|BU998168 HI10D06r HI Hordeum vulgare subsp. vulgare cDNA clone HI10D06
5-PRIME, mRNA sequence
Length = 617
Score = 108 bits (231), Expect(2) = 6e-024
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A SGFC GKCAVRC ++ C+KYCG+CC C CVP+G +G++DECPCYRDM
Sbjct: 129 LQAGDAASGFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSRDECPCYRDML 308
Query: 479 T 481
T
Sbjct: 309 T 311
Score = 22.1 bits (42), Expect(2) = 6e-024
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +3
Query: 488 GNRTRPKCP* 517
G R RPKCP*
Sbjct: 315 GPRKRPKCP* 344
>gb|BU998403.1|BU998403 HI10P04r HI Hordeum vulgare subsp. vulgare cDNA clone HI10P04
5-PRIME, mRNA sequence
Length = 617
Score = 108 bits (231), Expect(2) = 6e-024
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A SGFC GKCAVRC ++ C+KYCG+CC C CVP+G +G++DECPCYRDM
Sbjct: 129 LQAGDAASGFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSRDECPCYRDML 308
Query: 479 T 481
T
Sbjct: 309 T 311
Score = 22.1 bits (42), Expect(2) = 6e-024
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +3
Query: 488 GNRTRPKCP* 517
G R RPKCP*
Sbjct: 315 GPRKRPKCP* 344
>gb|BM377991.2|BM377991 EBem04_SQ004_N05_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_N05 5', mRNA sequence
Length = 469
Score = 108 bits (231), Expect(2) = 6e-024
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A SGFC GKCAVRC ++ C+KYCG+CC C CVP+G +G++DECPCYRDM
Sbjct: 135 LQAGDAASGFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSRDECPCYRDML 314
Query: 479 T 481
T
Sbjct: 315 T 317
Score = 22.1 bits (42), Expect(2) = 6e-024
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +3
Query: 488 GNRTRPKCP* 517
G R RPKCP*
Sbjct: 321 GPRKRPKCP* 350
>gb|BM376425.2|BM376425 EBem05_SQ002_D02_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_D02 5', mRNA sequence
Length = 459
Score = 108 bits (231), Expect(2) = 6e-024
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2 / +2
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A SGFC GKCAVRC ++ C+KYCG+CC C CVP+G +G++DECPCYRDM
Sbjct: 173 LQAGDAASGFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSRDECPCYRDML 352
Query: 479 T 481
T
Sbjct: 353 T 355
Score = 22.1 bits (42), Expect(2) = 6e-024
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 488 GNRTRPKCP* 517
G R RPKCP*
Sbjct: 359 GPRKRPKCP* 388
>gb|BM377308.2|BM377308 EBem05_SQ004_L23_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_L23 5', mRNA sequence
Length = 458
Score = 108 bits (231), Expect(2) = 6e-024
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2 / +1
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A SGFC GKCAVRC ++ C+KYCG+CC C CVP+G +G++DECPCYRDM
Sbjct: 139 LQAGDAASGFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSRDECPCYRDML 318
Query: 479 T 481
T
Sbjct: 319 T 321
Score = 22.1 bits (42), Expect(2) = 6e-024
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +1
Query: 488 GNRTRPKCP* 517
G R RPKCP*
Sbjct: 325 GPRKRPKCP* 354
>gb|BM376797.2|BM376797 EBem05_SQ003_E08_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_E08 5', mRNA sequence
Length = 364
Score = 108 bits (231), Expect(2) = 6e-024
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2 / +2
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A SGFC GKCAVRC ++ C+KYCG+CC C CVP+G +G++DECPCYRDM
Sbjct: 128 LQAGDAASGFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSRDECPCYRDML 307
Query: 479 T 481
T
Sbjct: 308 T 310
Score = 22.1 bits (42), Expect(2) = 6e-024
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 488 GNRTRPKCP* 517
G R RPKCP*
Sbjct: 314 GPRKRPKCP* 343
>gb|BM375116.2|BM375116 EBem06_SQ002_G06_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ002_G06 5', mRNA sequence
Length = 369
Score = 107 bits (228), Expect(2) = 1e-023
Identities = 36/61 (59%), Positives = 44/61 (72%)
Frame = +2 / +1
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A SGFC GKCAVRC ++ C+KYCG+CC C CVP+G +G+ DECPCYRDM
Sbjct: 139 LQAGDAASGFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSHDECPCYRDML 318
Query: 479 T 481
T
Sbjct: 319 T 321
Score = 22.1 bits (42), Expect(2) = 1e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +1
Query: 488 GNRTRPKCP* 517
G R RPKCP*
Sbjct: 325 GPRKRPKCP* 354
>gb|BM375345.2|BM375345 EBem06_SQ003_B05_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_B05 5', mRNA sequence
Length = 360
Score = 108 bits (231), Expect = 4e-023
Identities = 36/61 (59%), Positives = 45/61 (73%)
Frame = +2 / +3
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A SGFC GKCAVRC ++ C+KYCG+CC C CVP+G +G++DECPCYRDM
Sbjct: 123 LQAGDAASGFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSRDECPCYRDML 302
Query: 479 T 481
T
Sbjct: 303 T 305
>gb|BM373681.2|BM373681 EBma03_SQ002_F06_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ002_F06 5', mRNA sequence
Length = 288
Score = 108 bits (231), Expect = 4e-023
Identities = 42/79 (53%), Positives = 49/79 (62%)
Frame = +2 / +3
Query: 191 SRAVDWTSKVGNMKPAATARXXXXXXXXXXXXXXPSLRVSMAGSGFCDGKCAVRCSKASR 370
S+A + + ++ TA +LRV+MAGS CDGKC VRCSKASR
Sbjct: 51 SQATLKNTAMKKLRTTTTATTTLALLLLLVLLAASTLRVAMAGSALCDGKCGVRCSKASR 230
Query: 371 HDDCLKYCGICCATCNCVP 427
HDDCLKYCGICCA CNCVP
Sbjct: 231 HDDCLKYCGICCAECNCVP 287
>gb|BM369802.2|BM369802 EBem07_SQ004_K12_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_K12 5', mRNA sequence
Length = 289
Score = 105 bits (223), Expect(2) = 7e-023
Identities = 35/61 (57%), Positives = 44/61 (72%)
Frame = +2 / +2
Query: 299 LRVSMAGSGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMT 478
L+ A S FC GKCAVRC ++ C+KYCG+CC C CVP+G +G++DECPCYRDM
Sbjct: 59 LQAGDAASRFCAGKCAVRCGRSRARGACIKYCGLCCEECACVPTGRSGSRDECPCYRDML 238
Query: 479 T 481
T
Sbjct: 239 T 241
Score = 22.1 bits (42), Expect(2) = 7e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 488 GNRTRPKCP* 517
G R RPKCP*
Sbjct: 245 GPRKRPKCP* 274
>gb|BI957563.1|BI957563 HVSMEn0010C16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010C16f, mRNA sequence
Length = 677
Score = 106 bits (226), Expect = 2e-022
Identities = 38/62 (61%), Positives = 41/62 (66%)
Frame = +2 / +1
Query: 320 SGFCDGKCAVRCSKASRHDDCLKYCGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRT 499
S FC+GKC RC+KA+ D C KYCGICC C CVPSGT GNK ECPCYRD G
Sbjct: 55 SPFCEGKCKGRCNKAAVWDRCFKYCGICCEECKCVPSGTYGNKHECPCYRDKVNNKGKPK 234
Query: 500 RP 505
P
Sbjct: 235 CP 240
>gb|BU996885.1|BU996885 HI06D07r HI Hordeum vulgare subsp. vulgare cDNA clone HI06D07
5-PRIME, mRNA sequence
Length = 243
Score = 106 bits (226), Expect = 2e-022
Identities = 37/42 (88%), Positives = 37/42 (88%)
Frame = +2 / +2
Query: 392 CGICCATCNCVPSGTAGNKDECPCYRDMTTGHGNRTRPKCP* 517
CGICCA CNCVP GTAGNKDECPCYRD TTGHG R RPKCP*
Sbjct: 2 CGICCAECNCVPXGTAGNKDECPCYRDKTTGHGARKRPKCP* 127
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 468,989,757
Number of Sequences: 312970
Number of extensions: 9369310
Number of successful extensions: 142609
Number of sequences better than 1.0e-020: 58
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9978586143
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)