TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455820.2.1
(1312 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA019419.1|CA019419 HV11O17r HV Hordeum vulgare subsp. v... 506 e-143
gb|BU995276.1|BU995276 HM09L23r HM Hordeum vulgare subsp. v... 393 e-121
gb|BU995027.1|BU995027 HM08P11r HM Hordeum vulgare subsp. v... 293 e-117
gb|BU974803.1|BU974803 HB29C15r BC Hordeum vulgare subsp. v... 397 e-110
gb|BQ472211.1|BQ472211 HV04L17r HV Hordeum vulgare subsp. v... 365 e-100
gb|BQ768687.1|BQ768687 EBro08_SQ012_L08_R root, 3 week, dro... 363 1e-099
gb|BU974591.1|BU974591 HB28H04r BC Hordeum vulgare subsp. v... 330 1e-089
gb|BG300751.1|BG300751 HVSMEb0018E07f Hordeum vulgare seedl... 303 4e-087
gb|BG417012.1|BG417012 HVSMEk0015K11f Hordeum vulgare testa... 297 1e-079
gb|CV064104.1|CV064104 BNEL98b1 Barley EST endosperm librar... 250 1e-065
gb|BI957483.1|BI957483 HVSMEn0009N04f Hordeum vulgare rachi... 233 2e-060
gb|CA014369.1|CA014369 HT11C14r HT Hordeum vulgare subsp. v... 231 9e-060
gb|CK124192.1|CK124192 BES1824107f16 BES1824 Hordeum vulgar... 220 2e-056
gb|CB881163.1|CB881163 HM08P11w HM Hordeum vulgare subsp. v... 134 5e-055
gb|BM816351.1|BM816351 HB106B06_SK.ab1 HB Hordeum vulgare s... 215 6e-055
gb|BQ468531.1|BQ468531 HM01I09T HM Hordeum vulgare subsp. v... 213 2e-054
gb|CB881416.1|CB881416 HM09L23w HM Hordeum vulgare subsp. v... 122 2e-047
gb|BU980982.1|BU980982 HA22E16r HA Hordeum vulgare subsp. v... 165 2e-047
gb|BM816352.1|BM816352 HB106C03_SK.ab1 HB Hordeum vulgare s... 186 3e-046
gb|BF622942.3|BF622942 HVSMEa0012C24f Hordeum vulgare seedl... 178 5e-044
gb|CA015797.1|CA015797 HV11O17u HV Hordeum vulgare subsp. v... 177 9e-044
gb|BU974893.1|BU974893 HB29G22r BC Hordeum vulgare subsp. v... 170 2e-041
gb|AL507854.1|AL507854 AL507854 Hordeum vulgare Barke devel... 155 4e-037
gb|CA009082.1|CA009082 HU13C01r HU Hordeum vulgare subsp. v... 142 4e-033
gb|BJ456266.1|BJ456266 BJ456266 K. Sato unpublished cDNA li... 139 2e-032
gb|BM445019.2|BM445019 EBem09_SQ007_D04_R embryo, 1 Day ger... 134 1e-030
gb|BM374601.1|BM374601 EBma05_SQ002_C03_R maternal, 12 DPA,... 117 1e-025
gb|BG415905.2|BG415905 HVSMEk0008P01f Hordeum vulgare testa... 117 1e-025
gb|BQ664756.1|BQ664756 HV04L17u HV Hordeum vulgare subsp. v... 115 7e-025
gb|CA010209.1|CA010209 HT11C14u HT Hordeum vulgare subsp. v... 113 2e-024
gb|BI780945.1|BI780945 EBma05_SQ001_J20_R maternal, 12 DPA,... 111 9e-024
>gb|CA019419.1|CA019419 HV11O17r HV Hordeum vulgare subsp. vulgare cDNA clone HV11O17
5-PRIME, mRNA sequence
Length = 692
Score = 506 bits (1100), Expect = e-143
Identities = 199/219 (90%), Positives = 209/219 (95%)
Frame = -3 / +2
Query: 1133 AAPMSAIDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKK 954
A + +DSAW+ LI NF+EFQLATVVTF+LHE+VFFLSG PSLLFERFGLFAKYKIQKK
Sbjct: 35 AMAATPLDSAWEWLITNFSEFQLATVVTFVLHESVFFLSGFPSLLFERFGLFAKYKIQKK 214
Query: 953 SNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVL 774
SN AYQNRCV+RLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHW+V+VSQVLFYF+L
Sbjct: 215 SNAPAYQNRCVMRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWTVIVSQVLFYFIL 394
Query: 773 EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGP 594
EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA VVGPALTGP
Sbjct: 395 EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATVVGPALTGP 574
Query: 593 HLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGS 477
HLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGS
Sbjct: 575 HLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGS 691
Score = 386 bits (838), Expect = e-106
Identities = 164/212 (77%), Positives = 173/212 (81%)
Frame = +1 / -3
Query: 478 EPPYSGRKFDGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGW 657
EPPYSGRKFDGL GK* PL*ASTVS TL TIHSHRV +*GPVRAGPTT ANPRN ISAG
Sbjct: 690 EPPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHSHRVNK*GPVRAGPTTVANPRNNISAGC 511
Query: 658 AYSDVKPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGREL 837
AYS+V+P GVAYSWWTL TCLYSH VC ALCPQ*N+KSS QCG+GREL
Sbjct: 510 AYSEVRPNGVAYSWWTLWTCLYSHLVCRALCPQ*NMKSSSIK*KRT*DTITVQCGRGREL 331
Query: 838 LRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRREGRP 1017
L PMNLKAG EKIMTG+FT TW*RM R THLFW*A LLFFWILYLAKSPKRSKRREG+P
Sbjct: 330 LSPMNLKAG*EKIMTGKFTQTW*RMSRMTHLFW*AGALLFFWILYLAKSPKRSKRREGKP 151
Query: 1018 ERKKTVSWSRKVTTVASWNSVKLAIRSCHAES 1113
ERKKT+SW KVTTVASWNS+KL I AES
Sbjct: 150 ERKKTLSWRTKVTTVASWNSLKLVISHSQAES 55
Score = 257 bits (555), Expect = 1e-067
Identities = 110/163 (67%), Positives = 132/163 (80%)
Frame = +3 / -2
Query: 477 RAAIQRQEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWV 656
RA+IQ QE+*WAP EVI+ VSF+ L +PQ+HPQP GE++RAS+SR NN G+SQEQ FS V
Sbjct: 691 RASIQWQEV*WAPREVISTVSFHRL*HPQNHPQP*GEQVRASQSRANNRGKSQEQYFSRV 512
Query: 657 GIFRC*TKGCGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRA 836
IFR * + C + MVD V++ V*PF MQ PVPPIEY+I + K++KNLRYN RP+WQRKRA
Sbjct: 511 CIFRS*AEWCSIFMVDTVDMLV*PFGMQSPVPPIEYEIFEYKIKKNLRYNYRPVWQRKRA 332
Query: 837 PETHEFEGRIRENHDRQVHTYMVENEAQDTSVLVSRGVALLLD 965
P+ HE +GRI ENHD Q+HT MVENE DTSVLVSR VALLLD
Sbjct: 331 PQPHELKGRIGENHDWQIHTDMVENEPHDTSVLVSRSVALLLD 203
Score = 208 bits (448), Expect = 7e-053
Identities = 97/155 (62%), Positives = 105/155 (67%)
Frame = -1 / +3
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRIL 764
LLT+TDVSC SFSTM V* C S*FS ILP +SW GALFLCH GR LYLKFF L +I
Sbjct: 225 LLTRTDVSCGSFSTMSV*ICQS*FSPILPLSSWG*GALFLCHTGR*LYLKFFFILYSKIS 404
Query: 763 YSIGGTGHCIRNGYTNTFTASTMSTPHPLV*HRNMPTQLKFCSWDSPQXXXXXXXXLISS 584
YSIGGTG CI NGYT+ T STM+ H * RNM T LK+CSWD P+ L S
Sbjct: 405 YSIGGTGLCIPNGYTSMSTVSTMNMLHHSA*LRNMHTLLKYCSWDLPRLLALL*LALTCS 584
Query: 583 PCGCGWC*GFWRQLKLTAAITSHGAHQISCRCMAA 479
P GCGW *G R+ KLT ITS GAHQ SC CM A
Sbjct: 585 PYGCGWF*GC*RRWKLTVDITSLGAHQTSCHCMEA 689
Score = 180 bits (387), Expect(2) = 3e-057
Identities = 78/116 (67%), Positives = 89/116 (76%)
Frame = -2 / +1
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQDPEEEQ CLP+QMC A HSLPC+CE A HDFL+SCL +HG++ELSS ATL G CIS
Sbjct: 193 QVQDPEEEQRSCLPEQMCHAAHSLPCLCEFASHDFLLSCL*VHGAEELSSSATLDGNCIS 372
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGI 628
SSFL F+ILLGAQG AY+MAIQ Q PP*+ +T+ N GIC P *N VPGI
Sbjct: 373 SSFLFYTRRFHILLGAQGSAYQMAIQACPQCPP*ICYTIRPNFGICTPC*NIVPGI 540
Score = 166 bits (356), Expect(2) = 1e-049
Identities = 77/115 (66%), Positives = 84/115 (73%)
Frame = +2 / -1
Query: 629 IPGTKFQLGGHIPMLNQRVWRTHGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQ 808
IPGT FQ G HIP L + V HGG C CIAI YA PCAPNRI*N + ++KELEIQ
Sbjct: 539 IPGTIFQQGVHIPKLGRMV*HIHGGHCGHACIAIWYAEPCAPNRI*NLRV*NKKELEIQL 360
Query: 809 PTNVAKEESS*DP*I*RQDTRKS*QAGSHIHGRE*GARHICFGKQRCCSSSGSCT 973
P++VA+EESS P* *RQD RKS* A SH HGRE* A HIC GKQ CSSSGSCT
Sbjct: 359 PSSVAEEESSSAP*T*RQDRRKS*LANSHRHGRE*AA*HICSGKQERCSSSGSCT 195
Score = 62.9 bits (131), Expect(2) = 3e-057
Identities = 25/37 (67%), Positives = 29/37 (78%)
Frame = -2 / +1
Query: 588 LHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWRL 478
+HP+AVDG EG D SSQ +SLP+EPIK PA VWRL
Sbjct: 580 VHPMAVDGFEGVRDGGSSQWISLPLEPIKLPATVWRL 690
Score = 51.9 bits (107), Expect(2) = 1e-049
Identities = 23/35 (65%), Positives = 24/35 (68%)
Frame = +2 / -1
Query: 479 SRHTAAGNLMGSMGSDSRCELQLSPKPSTPSTATG 583
S HT AG+LMGS GSD CEL S PS PSTA G
Sbjct: 689 SLHTVAGSLMGSKGSDIHCELPPSLTPSKPSTAIG 585
>gb|BU995276.1|BU995276 HM09L23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09L23
5-PRIME, mRNA sequence
Length = 591
Score = 393 bits (852), Expect(2) = e-121
Identities = 151/168 (89%), Positives = 159/168 (94%)
Frame = -3 / +1
Query: 959 KKSNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYF 780
++ + AYQNRCV+RLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHW+V+VSQVLFYF
Sbjct: 1 EEEHAPAYQNRCVMRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWTVIVSQVLFYF 180
Query: 779 VLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALT 600
+LEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFA VVGPALT
Sbjct: 181 ILEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGFATVVGPALT 360
Query: 599 GPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH 456
GPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGS +H
Sbjct: 361 GPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSSDFHDYH 504
Score = 278 bits (601), Expect(2) = 5e-089
Identities = 118/154 (76%), Positives = 124/154 (80%)
Frame = +1 / -2
Query: 481 PPYSGRKFDGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWA 660
PPYSGRKFDGL GK* PL*ASTVS TL TIHSHRV +*GPVRAGPTT ANPRN ISAG A
Sbjct: 479 PPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHSHRVNK*GPVRAGPTTVANPRNNISAGCA 300
Query: 661 YSDVKPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELL 840
YS+V+P GVAYSWWTL TCLYSH VC ALCPQ*N+KSS QCG+GRELL
Sbjct: 299 YSEVRPNGVAYSWWTLWTCLYSHLVCRALCPQ*NMKSSSIK*KRT*DTITVQCGRGRELL 120
Query: 841 RPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*A 942
PMNLKAG EKIMTG+FT TW*RM R THLFW*A
Sbjct: 119 SPMNLKAG*EKIMTGKFTQTW*RMSRMTHLFW*A 18
Score = 244 bits (528), Expect(2) = 4e-077
Identities = 104/157 (66%), Positives = 126/157 (80%)
Frame = +3 / -1
Query: 480 AAIQRQEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVG 659
A+IQ QE+*WAP EVI+ VSF+ L +PQ+HPQP GE++RAS+SR NN G+SQEQ FS V
Sbjct: 480 ASIQWQEV*WAPREVISTVSFHRL*HPQNHPQP*GEQVRASQSRANNRGKSQEQYFSRVC 301
Query: 660 IFRC*TKGCGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRAP 839
IFR * + C + MVD V++ V*PF MQ PVPPIEY+I + K++KNLRYN RP+WQRKRAP
Sbjct: 300 IFRS*AEWCSIFMVDTVDMLV*PFGMQSPVPPIEYEIFEYKIKKNLRYNYRPVWQRKRAP 121
Query: 840 ETHEFEGRIRENHDRQVHTYMVENEAQDTSVLVSRGV 950
+ HE +GRI ENHD Q+HT MVENE DTSVLVSR V
Sbjct: 120 QPHELKGRIGENHDWQIHTDMVENEPHDTSVLVSRSV 10
Score = 213 bits (460), Expect = 2e-054
Identities = 99/167 (59%), Positives = 110/167 (65%)
Frame = -1 / +2
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRIL 764
LLT+TDVSC SFSTM V* C S*FS ILP +SW GALFLCH GR LYLKFF L +I
Sbjct: 17 LLTRTDVSCGSFSTMSV*ICQS*FSPILPLSSWG*GALFLCHTGR*LYLKFFFILYSKIS 196
Query: 763 YSIGGTGHCIRNGYTNTFTASTMSTPHPLV*HRNMPTQLKFCSWDSPQXXXXXXXXLISS 584
YSIGGTG CI NGYT+ T STM+ H * RNM T LK+CSWD P+ L S
Sbjct: 197 YSIGGTGLCIPNGYTSMSTVSTMNMLHHSA*LRNMHTLLKYCSWDLPRLLALL*LALTCS 376
Query: 583 PCGCGWC*GFWRQLKLTAAITSHGAHQISCRCMAARTSMTTITVCCT 443
P GCGW *G R+ KLT ITS GAHQ SC CM A + T + C+
Sbjct: 377 PYGCGWF*GC*RRWKLTVDITSLGAHQTSCHCMEAALTSMTTIIVCS 517
Score = 159 bits (342), Expect(3) = 4e-074
Identities = 69/105 (65%), Positives = 80/105 (76%)
Frame = -2 / +3
Query: 942 CLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCISSSFLLCP*GFY 763
CLP+QMC A HSLPC+CE A HDFL+SCL +HG++ELSS ATL G CISSSFL F+
Sbjct: 18 CLPEQMCHAAHSLPCLCEFASHDFLLSCL*VHGAEELSSSATLDGNCISSSFLFYTRRFH 197
Query: 762 ILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGI 628
ILLGAQG AY+MAIQ Q PP*+ +T+ N GIC P *N VPGI
Sbjct: 198 ILLGAQGSAYQMAIQACPQCPP*ICYTIRPNFGICTPC*NIVPGI 332
Score = 146 bits (314), Expect(3) = 4e-057
Identities = 69/105 (65%), Positives = 76/105 (72%)
Frame = +2 / -3
Query: 629 IPGTKFQLGGHIPMLNQRVWRTHGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQ 808
IPGT FQ G HIP L + V HGG C CIAI YA PCAPNRI*N + ++KELEIQ
Sbjct: 331 IPGTIFQQGVHIPKLGRMV*HIHGGHCGHACIAIWYAEPCAPNRI*NLRV*NKKELEIQL 152
Query: 809 PTNVAKEESS*DP*I*RQDTRKS*QAGSHIHGRE*GARHICFGKQ 943
P++VA+EESS P* *RQD RKS* A SH HGRE* A HIC GKQ
Sbjct: 151 PSSVAEEESSSAP*T*RQDRRKS*LANSHRHGRE*AA*HICSGKQ 17
Score = 97.7 bits (207), Expect(3) = 4e-074
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -3 / +1
Query: 485 GGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYR 372
G SDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDK YR
Sbjct: 478 GSSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYR 591
Score = 71.2 bits (149), Expect(2) = 5e-089
Identities = 33/38 (86%), Positives = 33/38 (86%)
Frame = +1 / -2
Query: 373 R*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPP 486
R* LSVPNNQSM*T VEA*FPD V STR*W*SWKSE P
Sbjct: 590 R*PLSVPNNQSM*TKVEA*FPDLV*STR*W*SWKSELP 477
Score = 64.8 bits (135), Expect(2) = 4e-077
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = +2 / -3
Query: 374 DNPCPCRTTSPCKQMLRHSSLTLCTAHGDGSHGSPS 481
DNP C+TTSPCKQ R SSLT C AH DGSHGS S
Sbjct: 589 DNPYLCQTTSPCKQK*RRSSLTWCRAHDDGSHGSQS 482
Score = 63.4 bits (132), Expect(3) = 4e-057
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +3 / -1
Query: 372 AIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAA 485
AI L+ A+QPVHVNK G+VP*L V+HT+MVVMEVRAA
Sbjct: 591 AITLICAKQPVHVNKSRGVVP*LGVEHTMMVVMEVRAA 478
Score = 62.5 bits (130), Expect(2) = e-121
Identities = 26/37 (70%), Positives = 28/37 (75%)
Frame = -1 / +2
Query: 484 AARTSMTTITVCCTQSQGTMPQHLFTWTGCSARTRII 374
AA TSMTTI VC T SQGT P LFTWTGC A+ R+I
Sbjct: 479 AALTSMTTIIVCSTPSQGTTPLLLFTWTGCLAQIRVI 589
Score = 61.1 bits (127), Expect(3) = 4e-074
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / +3
Query: 588 LHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWR 481
+HP+AVDG EG D SSQ +SLP+EPIK PA VWR
Sbjct: 372 VHPMAVDGFEGVRDGGSSQWISLPLEPIKLPATVWR 479
Score = 51.0 bits (105), Expect(3) = 4e-057
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +2 / -3
Query: 485 HTAAGNLMGSMGSDSRCELQLSPKPSTPSTATG 583
HT AG+LMGS GSD CEL S PS PSTA G
Sbjct: 475 HTVAGSLMGSKGSDIHCELPPSLTPSKPSTAIG 377
>gb|BU995027.1|BU995027 HM08P11r HM Hordeum vulgare subsp. vulgare cDNA clone HM08P11
5-PRIME, mRNA sequence
Length = 621
Score = 293 bits (634), Expect(3) = e-117
Identities = 111/121 (91%), Positives = 115/121 (95%)
Frame = -3 / +1
Query: 818 HWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEIL 639
HW+V+VSQVLFYF+LEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEIL
Sbjct: 169 HWTVIVSQVLFYFILEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEIL 348
Query: 638 FLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYH 459
FLGFA VVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGS +
Sbjct: 349 FLGFATVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSSDFHDY 528
Query: 458 H 456
H
Sbjct: 529 H 531
Score = 198 bits (426), Expect(3) = 7e-085
Identities = 82/98 (83%), Positives = 86/98 (87%)
Frame = +1 / -2
Query: 481 PPYSGRKFDGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWA 660
PPYSGRKFDGL GK* PL*ASTVS TL TIHSHRV +*GPVRAGPTT ANPRN ISAG A
Sbjct: 506 PPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHSHRVNK*GPVRAGPTTVANPRNNISAGCA 327
Query: 661 YSDVKPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSS 774
YS+V+P GVAYSWWTL TCLYSH VC ALCPQ*N+KSS
Sbjct: 326 YSEVRPNGVAYSWWTLWTCLYSHLVCRALCPQ*NMKSS 213
Score = 165 bits (354), Expect(3) = 5e-072
Identities = 71/113 (62%), Positives = 90/113 (79%)
Frame = +3 / -1
Query: 480 AAIQRQEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVG 659
A+IQ QE+*WAP EVI+ VSF+ L +PQ+HPQP GE++RAS+SR NN G+SQEQ FS V
Sbjct: 507 ASIQWQEV*WAPREVISTVSFHRL*HPQNHPQP*GEQVRASQSRANNRGKSQEQYFSRVC 328
Query: 660 IFRC*TKGCGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPM 818
IFR * + C + MVD V++ V*PF MQ PVPPIEY+I + K++KNLRYN RP+
Sbjct: 327 IFRS*AEWCSIFMVDTVDMLV*PFGMQSPVPPIEYEIFEYKIKKNLRYNYRPV 169
Score = 144 bits (309), Expect(2) = 2e-048
Identities = 67/124 (54%), Positives = 76/124 (61%)
Frame = -1 / +2
Query: 814 GRLLYLKFFSTLSLRILYSIGGTGHCIRNGYTNTFTASTMSTPHPLV*HRNMPTQLKFCS 635
GR LYLKFF L +I YSIGGTG CI NGYT+ T STM+ H * RNM T LK+CS
Sbjct: 173 GR*LYLKFFFILYSKISYSIGGTGLCIPNGYTSMSTVSTMNMLHHSA*LRNMHTLLKYCS 352
Query: 634 WDSPQXXXXXXXXLISSPCGCGWC*GFWRQLKLTAAITSHGAHQISCRCMAARTSMTTIT 455
WD P+ L SP GCGW *G R+ KLT ITS GAHQ SC CM A + T
Sbjct: 353 WDLPRLLALL*LALTCSPYGCGWF*GC*RRWKLTVDITSLGAHQTSCHCMEAALTSMTTI 532
Query: 454 VCCT 443
+ C+
Sbjct: 533 IVCS 544
Score = 103 bits (220), Expect(3) = e-117
Identities = 42/56 (75%), Positives = 47/56 (83%)
Frame = -3 / +2
Query: 986 GLFAKYKIQKKSNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLP 819
GL + ++ + AYQNRCV+RLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLP
Sbjct: 2 GLRLRQYRSEEEHAPAYQNRCVMRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLP 169
Score = 100 bits (212), Expect(4) = 2e-069
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = -3 / +1
Query: 485 GGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRK 369
G SDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDK YRK
Sbjct: 505 GSSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYRK 621
Score = 87.2 bits (184), Expect(4) = 1e-052
Identities = 38/63 (60%), Positives = 44/63 (69%)
Frame = +2 / -3
Query: 629 IPGTKFQLGGHIPMLNQRVWRTHGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQ 808
IPGT FQ G HIP L + V HGG C CIAI YA PCAPNRI*N + ++KELEIQ
Sbjct: 358 IPGTIFQQGVHIPKLGRMV*HIHGGHCGHACIAIWYAEPCAPNRI*NLRV*NKKELEIQL 179
Query: 809 PTN 817
P++
Sbjct: 178 PSS 170
Score = 83.5 bits (176), Expect(3) = 7e-085
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +1 / -1
Query: 820 GKGRELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*A 942
G+GRELL PMNLKAG EKIMTG+FT TW*RM R THLFW*A
Sbjct: 168 GRGRELLSPMNLKAG*EKIMTGKFTQTW*RMSRMTHLFW*A 46
Score = 82.2 bits (173), Expect(4) = 2e-069
Identities = 39/63 (61%), Positives = 44/63 (69%)
Frame = -2 / +3
Query: 816 LVGCCISSSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFV 637
L G CISSSFL F+ILLGAQG AY+MAIQ Q PP*+ +T+ N GIC P *N V
Sbjct: 171 LDGNCISSSFLFYTRRFHILLGAQGSAYQMAIQACPQCPP*ICYTIRPNFGICTPC*NIV 350
Query: 636 PGI 628
PGI
Sbjct: 351 PGI 359
Score = 78.0 bits (164), Expect(4) = 2e-069
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = -2 / +1
Query: 942 CLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFA 820
CLP+QMC A HSLPC+CE A HDFL+SCL +HG++ELSS A
Sbjct: 46 CLPEQMCHAAHSLPCLCEFASHDFLLSCL*VHGAEELSSSA 168
Score = 77.6 bits (163), Expect(3) = 5e-072
Identities = 32/43 (74%), Positives = 35/43 (81%)
Frame = +3 / -3
Query: 822 QRKRAPETHEFEGRIRENHDRQVHTYMVENEAQDTSVLVSRGV 950
QRKRAP+ HE +GRI ENHD Q+HT MVENE DTSVLVSR V
Sbjct: 166 QRKRAPQPHELKGRIGENHDWQIHTDMVENEPHDTSVLVSRSV 38
Score = 73.0 bits (153), Expect(3) = 7e-085
Identities = 34/39 (87%), Positives = 34/39 (87%)
Frame = +1 / -2
Query: 370 LR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPP 486
LR* LSVPNNQSM*T VEA*FPD V STR*W*SWKSE P
Sbjct: 620 LR*PLSVPNNQSM*TKVEA*FPDLV*STR*W*SWKSELP 504
Score = 68.9 bits (144), Expect(2) = 2e-048
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -1 / +3
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLC 821
LLT+TDVSC SFSTM V* C S*FS ILP +SW GALFLC
Sbjct: 45 LLTRTDVSCGSFSTMSV*ICQS*FSPILPLSSWG*GALFLC 167
Score = 68.9 bits (144), Expect(3) = 5e-072
Identities = 27/37 (72%), Positives = 28/37 (75%)
Frame = +2 / -3
Query: 371 CDNPCPCRTTSPCKQMLRHSSLTLCTAHGDGSHGSPS 481
CDNP C+TTSPCKQ R SSLT C AH DGSHGS S
Sbjct: 619 CDNPYLCQTTSPCKQK*RRSSLTWCRAHDDGSHGSQS 509
Score = 65.2 bits (136), Expect(4) = 1e-052
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / -1
Query: 369 LAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAA 485
LAI L+ A+QPVHVNK G+VP*L V+HT+MVVMEVRAA
Sbjct: 621 LAITLICAKQPVHVNKSRGVVP*LGVEHTMMVVMEVRAA 505
Score = 64.3 bits (134), Expect(3) = e-117
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / +2
Query: 484 AARTSMTTITVCCTQSQGTMPQHLFTWTGCSARTRIIA 371
AA TSMTTI VC T SQGT P LFTWTGC A+ R+IA
Sbjct: 506 AALTSMTTIIVCSTPSQGTTPLLLFTWTGCLAQIRVIA 619
Score = 61.1 bits (127), Expect(4) = 2e-069
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / +3
Query: 588 LHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWR 481
+HP+AVDG EG D SSQ +SLP+EPIK PA VWR
Sbjct: 399 VHPMAVDGFEGVRDGGSSQWISLPLEPIKLPATVWR 506
Score = 60.6 bits (126), Expect(4) = 1e-052
Identities = 30/41 (73%), Positives = 31/41 (75%)
Frame = +2 / -2
Query: 821 AKEESS*DP*I*RQDTRKS*QAGSHIHGRE*GARHICFGKQ 943
A+EESS P* *RQD RKS* A SH HGRE* A HIC GKQ
Sbjct: 167 AEEESSSAP*T*RQDRRKS*LANSHRHGRE*AA*HICSGKQ 45
Score = 51.0 bits (105), Expect(4) = 1e-052
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +2 / -3
Query: 485 HTAAGNLMGSMGSDSRCELQLSPKPSTPSTATG 583
HT AG+LMGS GSD CEL S PS PSTA G
Sbjct: 502 HTVAGSLMGSKGSDIHCELPPSLTPSKPSTAIG 404
>gb|BU974803.1|BU974803 HB29C15r BC Hordeum vulgare subsp. vulgare cDNA clone HB29C15
5-PRIME, mRNA sequence
Length = 493
Score = 397 bits (861), Expect = e-110
Identities = 154/162 (95%), Positives = 158/162 (97%)
Frame = -3 / +3
Query: 992 RFGLFAKYKIQKKSNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHW 813
R GLFAKYKIQKKSN AYQNRCV+RLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHW
Sbjct: 6 RGGLFAKYKIQKKSNAPAYQNRCVMRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHW 185
Query: 812 SVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFL 633
+V+VSQVLFYF+LEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFL
Sbjct: 186 TVIVSQVLFYFILEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFL 365
Query: 632 GFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSP 507
GFA VVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSP
Sbjct: 366 GFATVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSP 491
Score = 290 bits (627), Expect = 1e-077
Identities = 124/164 (75%), Positives = 131/164 (79%)
Frame = +1 / -1
Query: 505 DGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPVRAGPTTGANPRNKISAGWAYSDVKPKG 684
DGL GK* PL*ASTVS TL TIHSHRV +*GPVRAGPTT ANPRN ISAG AYS+V+P G
Sbjct: 493 DGLQGK*YPL*ASTVSNTLKTIHSHRVNK*GPVRAGPTTVANPRNNISAGCAYSEVRPNG 314
Query: 685 VAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAG 864
VAYSWWTL TCLYSH VC ALCPQ*N+KSS QCG+GRELL PMNLKAG
Sbjct: 313 VAYSWWTLWTCLYSHLVCRALCPQ*NMKSSSIK*KRT*DTITVQCGRGRELLSPMNLKAG 134
Query: 865 YEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKRS 996
EKIMTG+FT TW*RM R THLFW*A LLFFWILYLAKSP R+
Sbjct: 133 *EKIMTGKFTQTW*RMSRMTHLFW*AGALLFFWILYLAKSPPRA 2
Score = 243 bits (525), Expect = 2e-063
Identities = 103/153 (67%), Positives = 123/153 (80%)
Frame = +3 / -3
Query: 507 WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQEQNFSWVGIFRC*TKGC 686
WAP EVI+ VSF+ L +PQ+HPQP GE++RAS+SR NN G+SQEQ FS V IFR * + C
Sbjct: 491 WAPREVISTVSFHRL*HPQNHPQP*GEQVRASQSRANNRGKSQEQYFSRVCIFRS*AEWC 312
Query: 687 GVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRAPETHEFEGRI 866
+ MVD V++ V*PF MQ PVPPIEY+I + K++KNLRYN RP+WQRKRAP+ HE +GRI
Sbjct: 311 SIFMVDTVDMLV*PFGMQSPVPPIEYEIFEYKIKKNLRYNYRPVWQRKRAPQPHELKGRI 132
Query: 867 RENHDRQVHTYMVENEAQDTSVLVSRGVALLLD 965
ENHD Q+HT MVENE DTSVLVSR VALLLD
Sbjct: 131 GENHDWQIHTDMVENEPHDTSVLVSRSVALLLD 33
Score = 192 bits (414), Expect = 3e-048
Identities = 91/146 (62%), Positives = 99/146 (67%)
Frame = -1 / +1
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRIL 764
LLT+TDVSC SFSTM V* C S*FS ILP +SW GALFLCH GR LYLKFF L +I
Sbjct: 55 LLTRTDVSCGSFSTMSV*ICQS*FSPILPLSSWG*GALFLCHTGR*LYLKFFFILYSKIS 234
Query: 763 YSIGGTGHCIRNGYTNTFTASTMSTPHPLV*HRNMPTQLKFCSWDSPQXXXXXXXXLISS 584
YSIGGTG CI NGYT+ T STM+ H * RNM T LK+CSWD P+ L S
Sbjct: 235 YSIGGTGLCIPNGYTSMSTVSTMNMLHHSA*LRNMHTLLKYCSWDLPRLLALL*LALTCS 414
Query: 583 PCGCGWC*GFWRQLKLTAAITSHGAH 506
P GCGW *G R+ KLT ITS GAH
Sbjct: 415 PYGCGWF*GC*RRWKLTVDITSLGAH 492
Score = 180 bits (387), Expect(2) = 9e-052
Identities = 78/116 (67%), Positives = 89/116 (76%)
Frame = -2 / +2
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQDPEEEQ CLP+QMC A HSLPC+CE A HDFL+SCL +HG++ELSS ATL G CIS
Sbjct: 23 QVQDPEEEQRSCLPEQMCHAAHSLPCLCEFASHDFLLSCL*VHGAEELSSSATLDGNCIS 202
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPPS*NFVPGI 628
SSFL F+ILLGAQG AY+MAIQ Q PP*+ +T+ N GIC P *N VPGI
Sbjct: 203 SSFLFYTRRFHILLGAQGSAYQMAIQACPQCPP*ICYTIRPNFGICTPC*NIVPGI 370
Score = 166 bits (356), Expect(2) = 1e-045
Identities = 77/115 (66%), Positives = 84/115 (73%)
Frame = +2 / -2
Query: 629 IPGTKFQLGGHIPMLNQRVWRTHGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQ 808
IPGT FQ G HIP L + V HGG C CIAI YA PCAPNRI*N + ++KELEIQ
Sbjct: 369 IPGTIFQQGVHIPKLGRMV*HIHGGHCGHACIAIWYAEPCAPNRI*NLRV*NKKELEIQL 190
Query: 809 PTNVAKEESS*DP*I*RQDTRKS*QAGSHIHGRE*GARHICFGKQRCCSSSGSCT 973
P++VA+EESS P* *RQD RKS* A SH HGRE* A HIC GKQ CSSSGSCT
Sbjct: 189 PSSVAEEESSSAP*T*RQDRRKS*LANSHRHGRE*AA*HICSGKQERCSSSGSCT 25
Score = 44.6 bits (91), Expect(2) = 9e-052
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -2 / +2
Query: 588 LHPVAVDGVEGFGDS*SSQRLSLPMEPI 505
+HP+AVDG EG D SSQ +SLP+EPI
Sbjct: 410 VHPMAVDGFEGVRDGGSSQWISLPLEPI 493
Score = 38.2 bits (77), Expect(2) = 1e-045
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = +2 / -2
Query: 506 MGSMGSDSRCELQLSPKPSTPSTATG 583
MGS GSD CEL S PS PSTA G
Sbjct: 492 MGSKGSDIHCELPPSLTPSKPSTAIG 415
>gb|BQ472211.1|BQ472211 HV04L17r HV Hordeum vulgare subsp. vulgare cDNA clone HV04L17
5-PRIME, mRNA sequence
Length = 613
Score = 365 bits (791), Expect = e-100
Identities = 143/162 (88%), Positives = 153/162 (94%)
Frame = -3 / +2
Query: 1133 AAPMSAIDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKK 954
A + +DSAW+ LI NF+EFQLATVVTF+LHE+VFFLSG PSLLFERFGLFAKYKIQKK
Sbjct: 128 AMAATPLDSAWEWLITNFSEFQLATVVTFVLHESVFFLSGFPSLLFERFGLFAKYKIQKK 307
Query: 953 SNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVL 774
SN AYQNRCV+RLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHW+V+VSQVLFYF+L
Sbjct: 308 SNAPAYQNRCVMRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWTVIVSQVLFYFIL 487
Query: 773 EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPA 648
EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPA
Sbjct: 488 EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPA 613
Score = 276 bits (597), Expect = 2e-073
Identities = 115/155 (74%), Positives = 123/155 (79%)
Frame = +1 / -2
Query: 649 AGWAYSDVKPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKG 828
AG AYS+V+P GVAYSWWTL TCLYSH VC ALCPQ*N+KSS QCG+G
Sbjct: 612 AGCAYSEVRPNGVAYSWWTLWTCLYSHLVCRALCPQ*NMKSSSIK*KRT*DTITVQCGRG 433
Query: 829 RELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRRE 1008
RELL PMNLKAG EKIMTG+FT TW*RM R THLFW*A LLFFWILYLAKSPKRSKRRE
Sbjct: 432 RELLSPMNLKAG*EKIMTGKFTQTW*RMSRMTHLFW*AGALLFFWILYLAKSPKRSKRRE 253
Query: 1009 GRPERKKTVSWSRKVTTVASWNSVKLAIRSCHAES 1113
G+PERKKT+SW KVTTVASWNS+KL I AES
Sbjct: 252 GKPERKKTLSWRTKVTTVASWNSLKLVISHSQAES 148
Score = 171 bits (367), Expect = 1e-041
Identities = 72/106 (67%), Positives = 84/106 (79%)
Frame = +3 / -1
Query: 648 SWVGIFRC*TKGCGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQR 827
S V IFR * + C + MVD V++ V*PF MQ PVPPIEY+I + K++KNLRYN RP+WQR
Sbjct: 613 SRVCIFRS*AEWCSIFMVDTVDMLV*PFGMQSPVPPIEYEIFEYKIKKNLRYNYRPVWQR 434
Query: 828 KRAPETHEFEGRIRENHDRQVHTYMVENEAQDTSVLVSRGVALLLD 965
KRAP+ HE +GRI ENHD Q+HT MVENE DTSVLVSR VALLLD
Sbjct: 433 KRAPQPHELKGRIGENHDWQIHTDMVENEPHDTSVLVSRSVALLLD 296
Score = 167 bits (360), Expect = 9e-041
Identities = 72/108 (66%), Positives = 83/108 (76%)
Frame = -2 / +1
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQDPEEEQ CLP+QMC A HSLPC+CE A HDFL+SCL +HG++ELSS ATL G CIS
Sbjct: 286 QVQDPEEEQRSCLPEQMCHAAHSLPCLCEFASHDFLLSCL*VHGAEELSSSATLDGNCIS 465
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPP 652
SSFL F+ILLGAQG AY+MAIQ Q PP*+ +T+ N GIC P
Sbjct: 466 SSFLFYTRRFHILLGAQGSAYQMAIQACPQCPP*ICYTIRPNFGICTP 609
Score = 153 bits (328), Expect = 2e-036
Identities = 71/107 (66%), Positives = 78/107 (72%)
Frame = +2 / -3
Query: 653 GGHIPMLNQRVWRTHGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQPTNVAKEE 832
G HIP L + V HGG C CIAI YA PCAPNRI*N + ++KELEIQ P++VA+EE
Sbjct: 608 GVHIPKLGRMV*HIHGGHCGHACIAIWYAEPCAPNRI*NLRV*NKKELEIQLPSSVAEEE 429
Query: 833 SS*DP*I*RQDTRKS*QAGSHIHGRE*GARHICFGKQRCCSSSGSCT 973
SS P* *RQD RKS* A SH HGRE* A HIC GKQ CSSSGSCT
Sbjct: 428 SSSAP*T*RQDRRKS*LANSHRHGRE*AA*HICSGKQERCSSSGSCT 288
Score = 138 bits (296), Expect = 6e-032
Identities = 65/97 (67%), Positives = 70/97 (72%)
Frame = -1 / +3
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRIL 764
LLT+TDVSC SFSTM V* C S*FS ILP +SW GALFLCH GR LYLKFF L +I
Sbjct: 318 LLTRTDVSCGSFSTMSV*ICQS*FSPILPLSSWG*GALFLCHTGR*LYLKFFFILYSKIS 497
Query: 763 YSIGGTGHCIRNGYTNTFTASTMSTPHPLV*HRNMPT 653
YSIGGTG CI NGYT+ T STM+ H * RNM T
Sbjct: 498 YSIGGTGLCIPNGYTSMSTVSTMNMLHHSA*LRNMHT 608
>gb|BQ768687.1|BQ768687 EBro08_SQ012_L08_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_L08 5', mRNA sequence
Length = 538
Score = 363 bits (787), Expect = 1e-099
Identities = 142/161 (88%), Positives = 152/161 (94%)
Frame = -3 / +3
Query: 1133 AAPMSAIDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKK 954
A + +DSAW+ LI NF+EFQLATVVTF+LHE+VFFLSG PSLLFERFGLFAKYKIQKK
Sbjct: 54 AMAATPLDSAWEWLITNFSEFQLATVVTFVLHESVFFLSGFPSLLFERFGLFAKYKIQKK 233
Query: 953 SNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVL 774
SN AYQNRCV+RLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHW+V+VSQVLFYF+L
Sbjct: 234 SNAPAYQNRCVMRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWTVIVSQVLFYFIL 413
Query: 773 EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHP 651
EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHP
Sbjct: 414 EDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHP 536
Score = 276 bits (597), Expect = 2e-073
Identities = 115/155 (74%), Positives = 123/155 (79%)
Frame = +1 / -1
Query: 649 AGWAYSDVKPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKG 828
AG AYS+V+P GVAYSWWTL TCLYSH VC ALCPQ*N+KSS QCG+G
Sbjct: 538 AGCAYSEVRPNGVAYSWWTLWTCLYSHLVCRALCPQ*NMKSSSIK*KRT*DTITVQCGRG 359
Query: 829 RELLRPMNLKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRRE 1008
RELL PMNLKAG EKIMTG+FT TW*RM R THLFW*A LLFFWILYLAKSPKRSKRRE
Sbjct: 358 RELLSPMNLKAG*EKIMTGKFTQTW*RMSRMTHLFW*AGALLFFWILYLAKSPKRSKRRE 179
Query: 1009 GRPERKKTVSWSRKVTTVASWNSVKLAIRSCHAES 1113
G+PERKKT+SW KVTTVASWNS+KL I AES
Sbjct: 178 GKPERKKTLSWRTKVTTVASWNSLKLVISHSQAES 74
Score = 170 bits (366), Expect = 1e-041
Identities = 71/104 (68%), Positives = 83/104 (79%)
Frame = +3 / -3
Query: 654 VGIFRC*TKGCGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKR 833
V IFR * + C + MVD V++ V*PF MQ PVPPIEY+I + K++KNLRYN RP+WQRKR
Sbjct: 533 VCIFRS*AEWCSIFMVDTVDMLV*PFGMQSPVPPIEYEIFEYKIKKNLRYNYRPVWQRKR 354
Query: 834 APETHEFEGRIRENHDRQVHTYMVENEAQDTSVLVSRGVALLLD 965
AP+ HE +GRI ENHD Q+HT MVENE DTSVLVSR VALLLD
Sbjct: 353 APQPHELKGRIGENHDWQIHTDMVENEPHDTSVLVSRSVALLLD 222
Score = 167 bits (360), Expect = 9e-041
Identities = 72/108 (66%), Positives = 83/108 (76%)
Frame = -2 / +2
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQDPEEEQ CLP+QMC A HSLPC+CE A HDFL+SCL +HG++ELSS ATL G CIS
Sbjct: 212 QVQDPEEEQRSCLPEQMCHAAHSLPCLCEFASHDFLLSCL*VHGAEELSSSATLDGNCIS 391
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTLWFNIGICPP 652
SSFL F+ILLGAQG AY+MAIQ Q PP*+ +T+ N GIC P
Sbjct: 392 SSFLFYTRRFHILLGAQGSAYQMAIQACPQCPP*ICYTIRPNFGICTP 535
Score = 153 bits (328), Expect = 2e-036
Identities = 71/107 (66%), Positives = 78/107 (72%)
Frame = +2 / -2
Query: 653 GGHIPMLNQRVWRTHGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQPTNVAKEE 832
G HIP L + V HGG C CIAI YA PCAPNRI*N + ++KELEIQ P++VA+EE
Sbjct: 534 GVHIPKLGRMV*HIHGGHCGHACIAIWYAEPCAPNRI*NLRV*NKKELEIQLPSSVAEEE 355
Query: 833 SS*DP*I*RQDTRKS*QAGSHIHGRE*GARHICFGKQRCCSSSGSCT 973
SS P* *RQD RKS* A SH HGRE* A HIC GKQ CSSSGSCT
Sbjct: 354 SSSAP*T*RQDRRKS*LANSHRHGRE*AA*HICSGKQERCSSSGSCT 214
Score = 138 bits (296), Expect = 6e-032
Identities = 65/97 (67%), Positives = 70/97 (72%)
Frame = -1 / +1
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRIL 764
LLT+TDVSC SFSTM V* C S*FS ILP +SW GALFLCH GR LYLKFF L +I
Sbjct: 244 LLTRTDVSCGSFSTMSV*ICQS*FSPILPLSSWG*GALFLCHTGR*LYLKFFFILYSKIS 423
Query: 763 YSIGGTGHCIRNGYTNTFTASTMSTPHPLV*HRNMPT 653
YSIGGTG CI NGYT+ T STM+ H * RNM T
Sbjct: 424 YSIGGTGLCIPNGYTSMSTVSTMNMLHHSA*LRNMHT 534
>gb|BU974591.1|BU974591 HB28H04r BC Hordeum vulgare subsp. vulgare cDNA clone HB28H04
5-PRIME, mRNA sequence
Length = 434
Score = 330 bits (715), Expect = 1e-089
Identities = 129/140 (92%), Positives = 136/140 (97%)
Frame = -3 / +1
Query: 1094 LIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKKSNTSAYQNRCVLR 915
LI NF+EFQLATVVTF+LHE+VFFLSG PSLLFERFGLFAKYKIQKKSN AYQNRCV+R
Sbjct: 13 LITNFSEFQLATVVTFVLHESVFFLSGFPSLLFERFGLFAKYKIQKKSNAPAYQNRCVMR 192
Query: 914 LILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALH 735
LILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHW+V+VSQVLFYF+LEDFIFYWGHRALH
Sbjct: 193 LILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWTVIVSQVLFYFILEDFIFYWGHRALH 372
Query: 734 TKWLYKHVHSVHHEYATPFG 675
TKWLYKHVHSVHHEYATPFG
Sbjct: 373 TKWLYKHVHSVHHEYATPFG 432
Score = 258 bits (558), Expect = 5e-068
Identities = 106/140 (75%), Positives = 113/140 (80%)
Frame = +1 / -1
Query: 673 KPKGVAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMN 852
+P GVAYSWWTL TCLYSH VC ALCPQ*N+KSS QCG+GRELL PMN
Sbjct: 434 RPNGVAYSWWTLWTCLYSHLVCRALCPQ*NMKSSSIK*KRT*DTITVQCGRGRELLSPMN 255
Query: 853 LKAGYEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKT 1032
LKAG EKIMTG+FT TW*RM R THLFW*A LLFFWILYLAKSPKRSKRREG+PERKKT
Sbjct: 254 LKAG*EKIMTGKFTQTW*RMSRMTHLFW*AGALLFFWILYLAKSPKRSKRREGKPERKKT 75
Query: 1033 VSWSRKVTTVASWNSVKLAI 1092
+SW KVTTVASWNS+KL I
Sbjct: 74 LSWRTKVTTVASWNSLKLVI 15
Score = 163 bits (351), Expect = 2e-039
Identities = 66/94 (70%), Positives = 77/94 (81%)
Frame = +3 / -3
Query: 684 CGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRAPETHEFEGR 863
C + MVD V++ V*PF MQ PVPPIEY+I + K++KNLRYN RP+WQRKRAP+ HE +GR
Sbjct: 423 CSIFMVDTVDMLV*PFGMQSPVPPIEYEIFEYKIKKNLRYNYRPVWQRKRAPQPHELKGR 244
Query: 864 IRENHDRQVHTYMVENEAQDTSVLVSRGVALLLD 965
I ENHD Q+HT MVENE DTSVLVSR VALLLD
Sbjct: 243 IGENHDWQIHTDMVENEPHDTSVLVSRSVALLLD 142
Score = 156 bits (336), Expect = 2e-037
Identities = 67/99 (67%), Positives = 78/99 (78%)
Frame = -2 / +3
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQDPEEEQ CLP+QMC A HSLPC+CE A HDFL+SCL +HG++ELSS ATL G CIS
Sbjct: 132 QVQDPEEEQRSCLPEQMCHAAHSLPCLCEFASHDFLLSCL*VHGAEELSSSATLDGNCIS 311
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*VRHTL 679
SSFL F+ILLGAQG AY+MAIQ Q PP*+ +T+
Sbjct: 312 SSFLFYTRRFHILLGAQGSAYQMAIQACPQCPP*ICYTI 428
Score = 142 bits (304), Expect = 5e-033
Identities = 65/93 (69%), Positives = 71/93 (76%)
Frame = +2 / -2
Query: 695 HGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQPTNVAKEESS*DP*I*RQDTRK 874
HGG C CIAI YA PCAPNRI*N + ++KELEIQ P++VA+EESS P* *RQD RK
Sbjct: 412 HGGHCGHACIAIWYAEPCAPNRI*NLRV*NKKELEIQLPSSVAEEESSSAP*T*RQDRRK 233
Query: 875 S*QAGSHIHGRE*GARHICFGKQRCCSSSGSCT 973
S* A SH HGRE* A HIC GKQ CSSSGSCT
Sbjct: 232 S*LANSHRHGRE*AA*HICSGKQERCSSSGSCT 134
Score = 132 bits (283), Expect = 4e-030
Identities = 60/87 (68%), Positives = 65/87 (74%)
Frame = -1 / +2
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRIL 764
LLT+TDVSC SFSTM V* C S*FS ILP +SW GALFLCH GR LYLKFF L +I
Sbjct: 164 LLTRTDVSCGSFSTMSV*ICQS*FSPILPLSSWG*GALFLCHTGR*LYLKFFFILYSKIS 343
Query: 763 YSIGGTGHCIRNGYTNTFTASTMSTPH 683
YSIGGTG CI NGYT+ T STM+ H
Sbjct: 344 YSIGGTGLCIPNGYTSMSTVSTMNMLH 424
>gb|BG300751.1|BG300751 HVSMEb0018E07f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0018E07f, mRNA sequence
Length = 620
Score = 303 bits (655), Expect(2) = 4e-087
Identities = 121/150 (80%), Positives = 132/150 (88%)
Frame = -3 / +1
Query: 1133 AAPMSAIDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKK 954
A + +DSAW+ LI NF+EFQLATVVTF+LHE+V LSG PSLLFERFGLFAKYKIQKK
Sbjct: 46 AMAATPLDSAWEWLITNFSEFQLATVVTFVLHESVLLLSGFPSLLFERFGLFAKYKIQKK 225
Query: 953 SNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVL 774
SN AYQNRCV+RLILYHVCVN PVMIFSYPAFKFMGLRSSLPLPHW+ +VSQV FYF+L
Sbjct: 226 SNAPAYQNRCVMRLILYHVCVNXPVMIFSYPAFKFMGLRSSLPLPHWTEIVSQVXFYFIL 405
Query: 773 EDFIFYWGHRALHTKWLYKHVHSVHHEYAT 684
ED IFY GHRALHTK L+KH HSVHHEYAT
Sbjct: 406 EDLIFYXGHRALHTKLLFKHCHSVHHEYAT 495
Score = 236 bits (510), Expect(2) = 6e-065
Identities = 101/143 (70%), Positives = 109/143 (76%)
Frame = +1 / -1
Query: 685 VAYSWWTL*TCLYSHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAG 864
VAYSWWTL* CL S+ VC ALCP *N++SS QCG+GRELL PMNLKAG
Sbjct: 494 VAYSWWTL*QCLNSNLVCRALCPX*NMRSSSIK*KXT*DTISVQCGRGRELLSPMNLKAG 315
Query: 865 YEKIMTGRFTHTW*RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKTVSWS 1044
EKIMTG FT TW*RM R THLFW*A LLFFWILYLAKSPKRSKRREG+P+ KT+SW
Sbjct: 314 *EKIMTGXFTQTW*RMSRMTHLFW*AGALLFFWILYLAKSPKRSKRREGKPDSNKTLSWR 135
Query: 1045 RKVTTVASWNSVKLAIRSCHAES 1113
KVTTVASWNS+KL I AES
Sbjct: 134 TKVTTVASWNSLKLVISHSQAES 66
Score = 145 bits (312), Expect(2) = 1e-035
Identities = 61/95 (64%), Positives = 71/95 (74%)
Frame = +3 / -3
Query: 681 GCGVLMVDAVNVFV*PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRAPETHEFEG 860
GC + MVD V + * F MQ PVP IEY+I + K++ NLRY RP+WQRKRAP+ HE +G
Sbjct: 498 GCSIFMVDTVTMLE*QFGMQSPVPXIEYEIFEYKIKXNLRYYFRPVWQRKRAPQPHELKG 319
Query: 861 RIRENHDRQVHTYMVENEAQDTSVLVSRGVALLLD 965
RI ENHD +HT MVENE DTSVLVSR VALLLD
Sbjct: 318 RIGENHDWXIHTDMVENEPHDTSVLVSRSVALLLD 214
Score = 143 bits (307), Expect = 2e-033
Identities = 62/95 (65%), Positives = 72/95 (75%)
Frame = -2 / +3
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQDPEEEQ CLP+QMC A HSLPC+CE A HDFL+SCL +HG++ELSS ATL G IS
Sbjct: 204 QVQDPEEEQRSCLPEQMCHAAHSLPCLCEXASHDFLLSCL*VHGAEELSSSATLDGNSIS 383
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAIQTRSQRPP*V 691
S FL +IL GAQG AY++AIQ SQ PP*+
Sbjct: 384 SXFLFYTRRSHILXGAQGSAYQIAIQALSQCPP*I 488
Score = 125 bits (268), Expect = 5e-028
Identities = 60/93 (64%), Positives = 68/93 (73%)
Frame = +2 / -2
Query: 695 HGGRCERVCIAISYAMPCAPNRI*NPQGQSRKELEIQQPTNVAKEESS*DP*I*RQDTRK 874
HGG C+ IAI YA PCAP RI*+ + ++K LEI P++VA+EESS P* *RQD RK
Sbjct: 484 HGGHCDNA*IAIWYAEPCAPXRI*DLRV*NKKXLEILFPSSVAEEESSSAP*T*RQDRRK 305
Query: 875 S*QAGSHIHGRE*GARHICFGKQRCCSSSGSCT 973
S* A SH HGRE* A HIC GKQ CSSSGSCT
Sbjct: 304 S*LAXSHRHGRE*AA*HICSGKQERCSSSGSCT 206
Score = 112 bits (239), Expect = 5e-024
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = -1 / +2
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRIL 764
LLT+TDVSC SFSTM V* C S*FS ILP +SW GALFLCH GR YLK L +I
Sbjct: 236 LLTRTDVSCGSFSTMSV*XCQS*FSPILPLSSWG*GALFLCHTGRK*YLKXLFILYSKIS 415
Query: 763 YSIGGTGHCIRNGYTNTFTASTMSTPHP 680
YS GTG CI N Y++ T STM+ P
Sbjct: 416 YSXWGTGLCIPNCYSSIVTVSTMNMLQP 499
Score = 40.0 bits (81), Expect(2) = 4e-087
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3 / +2
Query: 620 VVGPALTGPHLFTLWLWM 567
++ PALTGPH TLWLWM
Sbjct: 566 LLAPALTGPHWLTLWLWM 619
Score = 32.2 bits (64), Expect(2) = 6e-065
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -3
Query: 568 IHSHRVKR*GPVRAG 612
IHSHRV +*GPV+AG
Sbjct: 618 IHSHRVNQ*GPVKAG 574
Score = 24.9 bits (48), Expect(2) = 1e-035
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -2
Query: 567 HPQPQGEEMRASKSR 611
HPQP G +RAS+SR
Sbjct: 619 HPQP*G*PVRASQSR 575
>gb|BG417012.1|BG417012 HVSMEk0015K11f Hordeum vulgare testa/pericarp EST library HVcDNA0013
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEk0015K11f, mRNA sequence
Length = 502
Score = 297 bits (642), Expect = 1e-079
Identities = 117/137 (85%), Positives = 127/137 (92%)
Frame = -3 / +3
Query: 1133 AAPMSAIDSAWQLLIANFTEFQLATVVTFLLHETVFFLSGLPSLLFERFGLFAKYKIQKK 954
A + +DSAW+ LI NF+EFQLATVVTF+LHE+VFFLSG PSLLFERFGLFAKYKIQKK
Sbjct: 90 AMAATPLDSAWEWLITNFSEFQLATVVTFILHESVFFLSGFPSLLFERFGLFAKYKIQKK 269
Query: 953 SNTSAYQNRCVLRLILYHVCVNLPVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVL 774
SN AYQNRCV+RLILYHVCVNLPVMI SYPAFKFMGLRSSLPLPHW+V+VSQVLFYF+L
Sbjct: 270 SNAPAYQNRCVMRLILYHVCVNLPVMIISYPAFKFMGLRSSLPLPHWTVIVSQVLFYFIL 449
Query: 773 EDFIFYWGHRALHTKWL 723
EDFIFYWGHRALHTKWL
Sbjct: 450 EDFIFYWGHRALHTKWL 500
Score = 217 bits (469), Expect = 9e-056
Identities = 93/130 (71%), Positives = 99/130 (76%)
Frame = +1 / -1
Query: 724 SHFVCNALCPQ*NIKSSXXXXXXXXXXXXXQCGKGRELLRPMNLKAGYEKIMTGRFTHTW 903
SH VC ALCPQ*N+KSS QCG+GRELL PMNLKAG E IMTG+FT TW
Sbjct: 499 SHLVCRALCPQ*NMKSSSIK*KRT*DTITVQCGRGRELLSPMNLKAG*EIIMTGKFTQTW 320
Query: 904 *RMRRKTHLFW*AEVLLFFWILYLAKSPKRSKRREGRPERKKTVSWSRKVTTVASWNSVK 1083
*RM R THLFW*A LLFFWILYLAKSPKRS RREG+PERKKT+SW KVTTVASWNS+K
Sbjct: 319 *RMSRMTHLFW*AGALLFFWILYLAKSPKRSNRREGKPERKKTLSWRMKVTTVASWNSLK 140
Query: 1084 LAIRSCHAES 1113
L I AES
Sbjct: 139 LVISHSQAES 110
Score = 145 bits (311), Expect = 5e-034
Identities = 59/81 (72%), Positives = 68/81 (83%)
Frame = +3 / -3
Query: 723 *PFRMQCPVPPIEYKILKDKVEKNLRYNNRPMWQRKRAPETHEFEGRIRENHDRQVHTYM 902
*PF MQ PVPPIEY+I + K++KNLRYN RP+WQRKRAP+ HE +GRI +NHD Q+HT M
Sbjct: 500 *PFGMQSPVPPIEYEIFEYKIKKNLRYNYRPVWQRKRAPQPHELKGRIGDNHDWQIHTDM 321
Query: 903 VENEAQDTSVLVSRGVALLLD 965
VENE DTSVLVSR VALLLD
Sbjct: 320 VENEPHDTSVLVSRSVALLLD 258
Score = 144 bits (310), Expect = 7e-034
Identities = 61/85 (71%), Positives = 69/85 (81%)
Frame = -2 / +2
Query: 975 QVQDPEEEQHLCLPKQMCLAPHSLPCMCEPACHDFLVSCLQIHGSQELSSFATLVGCCIS 796
QVQDPEEEQ CLPKQMC A HSLPC+CE A HD+L+SCL +HG++ELSS ATL G CIS
Sbjct: 248 QVQDPEEEQRSCLPKQMCHAAHSLPCLCEFASHDYLLSCL*VHGAEELSSSATLDGNCIS 427
Query: 795 SSFLLCP*GFYILLGAQGIAYEMAI 721
SSFL F+ILLGAQG AY+MAI
Sbjct: 428 SSFLFYTRRFHILLGAQGSAYQMAI 502
Score = 125 bits (267), Expect = 6e-028
Identities = 60/84 (71%), Positives = 66/84 (78%)
Frame = +2 / -2
Query: 722 IAISYAMPCAPNRI*NPQGQSRKELEIQQPTNVAKEESS*DP*I*RQDTRKS*QAGSHIH 901
IAI YA PCAPNRI*N + ++KELEIQ P++VA+EESS P* *RQD R S* A SH H
Sbjct: 501 IAIWYAEPCAPNRI*NLRV*NKKELEIQLPSSVAEEESSSAP*T*RQDRR*S*LANSHRH 322
Query: 902 GRE*GARHICFGKQRCCSSSGSCT 973
GRE* A HICFGKQ CSSSGSCT
Sbjct: 321 GRE*AA*HICFGKQERCSSSGSCT 250
Score = 118 bits (253), Expect = 5e-026
Identities = 54/74 (72%), Positives = 56/74 (75%)
Frame = -1 / +1
Query: 943 LLTKTDVSCASFSTMYV*TCLS*FSRILPSNSWVSGALFLCHIGRLLYLKFFSTLSLRIL 764
LLTKTDVSC SFSTM V* C S* S ILP +SW GALFLCH GR LYLKFF L +I
Sbjct: 280 LLTKTDVSCGSFSTMSV*ICQS*LSPILPLSSWG*GALFLCHTGR*LYLKFFFILYSKIS 459
Query: 763 YSIGGTGHCIRNGY 722
YSIGGTG CI NGY
Sbjct: 460 YSIGGTGLCIPNGY 501
>gb|CV064104.1|CV064104 BNEL98b1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL98b1 5' similar to putative
sterol 4-alpha-methyl-oxidase, mRNA sequence
Length = 640
Score = 250 bits (541), Expect = 1e-065
Identities = 98/106 (92%), Positives = 101/106 (95%)
Frame = -3 / -2
Query: 635 LGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH 456
LGFA VVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH
Sbjct: 636 LGFATVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH 457
Query: 455 RVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKNL*IVEA 318
RVLYTKSGNYASTFVYMDWLFGTDK YRK K +E +EGK+L*IVEA
Sbjct: 456 RVLYTKSGNYASTFVYMDWLFGTDKGYRKTKAMEGEEGKHL*IVEA 319
Score = 197 bits (424), Expect = 1e-049
Identities = 89/106 (83%), Positives = 91/106 (85%)
Frame = +1 / +2
Query: 319 ASTIYRFFPSFSSMVFALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGR 498
ASTIY+ FPS SM F LR* LSVPNNQSM*T VEA*FPD V STR*W*SWKSEPPYSGR
Sbjct: 320 ASTIYKCFPSSPSMAFVLR*PLSVPNNQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGR 499
Query: 499 KFDGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPVRAGPTTGANPR 636
KFDGL GK* PL*ASTVS TL TIHSHRV +*GPVRAGPTT ANPR
Sbjct: 500 KFDGLQGK*YPL*ASTVSNTLKTIHSHRVNK*GPVRAGPTTVANPR 637
Score = 171 bits (369), Expect = 5e-042
Identities = 73/108 (67%), Positives = 91/108 (84%)
Frame = +3 / +1
Query: 315 SSFHNLQIFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQR 494
SSFHNLQ+ PFF +G CLAI L+ A+QPVHVNK G+VP*L V+HT+MVVMEVRA+IQ
Sbjct: 316 SSFHNLQMLPFFPFHGFCLAITLICAKQPVHVNKSRGVVP*LGVEHTMMVVMEVRASIQW 495
Query: 495 QEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGESQE 638
QE+*WAP EVI+ VSF+ L +PQ+HPQP GE++RAS+SR NN G+SQ+
Sbjct: 496 QEV*WAPREVISTVSFHRL*HPQNHPQP*GEQVRASQSRANNRGKSQD 639
Score = 158 bits (339), Expect = 7e-038
Identities = 68/109 (62%), Positives = 75/109 (68%)
Frame = -1 / -3
Query: 637 SWDSPQXXXXXXXXLISSPCGCGWC*GFWRQLKLTAAITSHGAHQISCRCMAARTSMTTI 458
SWD P+ L SP GCGW *G R+ KLT ITS GAHQ SC CM A TSMTTI
Sbjct: 638 SWDLPRLLALL*LALTCSPYGCGWF*GC*RRWKLTVDITSLGAHQTSCHCMEALTSMTTI 459
Query: 457 TVCCTQSQGTMPQHLFTWTGCSARTRIIARQRPLRRKKGKICRLWKLLS 311
VC T SQGT P LFTWTGC A+ R+IARQ+P + KKG IC+LWKLLS
Sbjct: 458 IVCSTPSQGTTPLLLFTWTGCLAQIRVIARQKPWKGKKGSICKLWKLLS 312
Score = 136 bits (292), Expect = 2e-031
Identities = 61/92 (66%), Positives = 68/92 (73%)
Frame = -2 / -1
Query: 588 LHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKVRELCLNICL 409
+HP+AVDG EG D SSQ +SLP+EPIK PA VWRL LP*LPS CA+H+VREL L CL
Sbjct: 589 VHPMAVDGFEGVRDGGSSQWISLPLEPIKLPATVWRL*LP*LPSSCALHQVRELRLYFCL 410
Query: 408 HGLVVRHGQGLSQGKDH*GERREKSVDCGSCS 313
HGLVV H GLSQ K H RRE V+CGS S
Sbjct: 409 HGLVVWHR*GLSQDKSHGRGRREAFVNCGSYS 314
Score = 133 bits (285), Expect = 2e-030
Identities = 59/90 (65%), Positives = 62/90 (68%)
Frame = +2 / +3
Query: 314 EQLPQSTDFSLLSPQWSLPCDNPCPCRTTSPCKQMLRHSSLTLCTAHGDGSHGSPSRHTA 493
E LPQ T+ SLL W L CDNP C+TTSPCKQ R SSLT C AH DGSHGS S HT
Sbjct: 315 E*LPQFTNASLLPLPWLLSCDNPYLCQTTSPCKQK*RRSSLTWCRAHDDGSHGSQSLHTV 494
Query: 494 AGNLMGSMGSDSRCELQLSPKPSTPSTATG 583
AG+LMGS GSD CEL S PS PSTA G
Sbjct: 495 AGSLMGSKGSDIHCELPPSLTPSKPSTAIG 584
>gb|BI957483.1|BI957483 HVSMEn0009N04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009N04f, mRNA sequence
Length = 658
Score = 233 bits (503), Expect = 2e-060
Identities = 84/180 (46%), Positives = 119/180 (66%)
Frame = -3 / +3
Query: 875 IFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHH 696
+ SYPA + +G+R+ LPLP V +Q+ Y ++ED++ YW HR LHT+W Y H+H VHH
Sbjct: 81 LVSYPAVRAVGIRTGLPLPSPGEVAAQIAVYLLVEDYLGYWIHRLLHTRWGYDHIHRVHH 260
Query: 695 EYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFP 516
E+ P G + YAH AE+L LG GPA+ H+ TLWLW VLR LE ++ HSG++FP
Sbjct: 261 EFTAPVGYAAPYAHWAEVLILGVPAFTGPAIVPCHMTTLWLWFVLRHLEAIDIHSGFNFP 440
Query: 515 WSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKN 336
++P+ +P YGG++ HDYHHRV N++S F + D+L+GTDK Y+ K K +N
Sbjct: 441 FNPTKLIPFYGGAEHHDYHHRV*RQSQSNFSSVFTFCDYLYGTDKGYKHHKASLAKSLRN 620
>gb|CA014369.1|CA014369 HT11C14r HT Hordeum vulgare subsp. vulgare cDNA clone HT11C14
5-PRIME, mRNA sequence
Length = 644
Score = 231 bits (498), Expect = 9e-060
Identities = 78/171 (45%), Positives = 116/171 (67%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYPA K +G+ + LPLP + +Q++ YF++ED++ YW HR LH +W Y+ +H
Sbjct: 112 PLQLVSYPAVKMVGIHTGLPLPSLGEMAAQLVVYFLVEDYLNYWIHRLLHGEWGYEKIHR 291
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
+HHEY P G + YAH AE+L LG GPA+ H+ T WLW++LR +E ++ HSG+
Sbjct: 292 IHHEYTAPIGFAAPYAHWAEVLILGIPSFAGPAIAPGHMITFWLWIILRQMEAIDTHSGF 471
Query: 524 HFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYR 372
FP+S + ++P YGG+++HDYHH V N+AS F Y D+L+GTD+ YR
Sbjct: 472 DFPFSLTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDRGYR 624
>gb|CK124192.1|CK124192 BES1824107f16 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F167 5-PRIME, mRNA sequence
Length = 823
Score = 220 bits (474), Expect = 2e-056
Identities = 74/165 (44%), Positives = 111/165 (67%)
Frame = -3 / +2
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYPA K +G+ + LPLP + +Q++ YF++ED++ YW HR LH +W Y+ +H
Sbjct: 302 PLQLVSYPAVKMVGIHTGLPLPSLGEMAAQLVVYFLVEDYLNYWIHRLLHGEWGYEKIHR 481
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
+HHEY P G + YAH AE+L LG GPA+ H+ T WLW++LR +E ++ HSG+
Sbjct: 482 IHHEYTAPIGFAAPYAHWAEVLILGIPSFAGPAIAPGHMITFWLWIILRQMEAIDTHSGF 661
Query: 524 HFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFG 390
FP+S + ++P YGG+++HDYHH V N+AS F Y D+L+G
Sbjct: 662 DFPFSLTKYIPFYGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYG 796
>gb|CB881163.1|CB881163 HM08P11w HM Hordeum vulgare subsp. vulgare cDNA clone HM08P11
3-PRIME, mRNA sequence
Length = 604
Score = 134 bits (288), Expect(2) = 5e-055
Identities = 52/59 (88%), Positives = 53/59 (89%)
Frame = -3 / -1
Query: 632 GFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH 456
GFA VVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGS +H
Sbjct: 604 GFATVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSSDFHDYH 428
Score = 122 bits (261), Expect(2) = 2e-039
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = -3 / -1
Query: 485 GGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKNL*IVEA 318
G SDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDK YRK K +E +EGK+L*IVEA
Sbjct: 454 GSSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYRKTKAMEGEEGKHL*IVEA 287
Score = 100 bits (214), Expect(2) = 5e-055
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -1 / -2
Query: 484 AARTSMTTITVCCTQSQGTMPQHLFTWTGCSARTRIIARQRPLRRKKGKICRLWKLLS 311
AA TSMTTI VC T SQGT P LFTWTGC A+ R+IARQ+P + KKG IC+LWKLLS
Sbjct: 453 AALTSMTTIIVCSTPSQGTTPLLLFTWTGCLAQIRVIARQKPWKGKKGSICKLWKLLS 280
Score = 99.1 bits (210), Expect(2) = 3e-043
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = +1 / +3
Query: 481 PPYSGRKFDGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPVRAGPTTGAN 630
PPYSGRKFDGL GK* PL*ASTVS TL TIHSHRV +*GPVRAGPTT AN
Sbjct: 453 PPYSGRKFDGLQGK*YPL*ASTVSNTLKTIHSHRVNK*GPVRAGPTTVAN 602
Score = 97.3 bits (206), Expect(2) = 5e-037
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = +1 / +3
Query: 319 ASTIYRFFPSFSSMVFALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPP 486
ASTIY+ FPS SM F LR* LSVPNNQSM*T VEA*FPD V STR*W*SWKSE P
Sbjct: 288 ASTIYKCFPSSPSMAFVLR*PLSVPNNQSM*TKVEA*FPDLV*STR*W*SWKSELP 455
Score = 97.3 bits (206), Expect(2) = 3e-043
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3 / +2
Query: 315 SSFHNLQIFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAA 485
SSFHNLQ+ PFF +G CLAI L+ A+QPVHVNK G+VP*L V+HT+MVVMEVRAA
Sbjct: 284 SSFHNLQMLPFFPFHGFCLAITLICAKQPVHVNKSRGVVP*LGVEHTMMVVMEVRAA 454
Score = 86.3 bits (182), Expect(2) = 1e-025
Identities = 37/56 (66%), Positives = 39/56 (69%)
Frame = +2 / +1
Query: 314 EQLPQSTDFSLLSPQWSLPCDNPCPCRTTSPCKQMLRHSSLTLCTAHGDGSHGSPS 481
E LPQ T+ SLL W L CDNP C+TTSPCKQ R SSLT C AH DGSHGS S
Sbjct: 283 E*LPQFTNASLLPLPWLLSCDNPYLCQTTSPCKQK*RRSSLTWCRAHDDGSHGSQS 450
Score = 78.0 bits (164), Expect(2) = 5e-037
Identities = 33/51 (64%), Positives = 43/51 (84%)
Frame = +3 / +2
Query: 480 AAIQRQEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASKSRTNNWGES 632
A+IQ QE+*WAP EVI+ VSF+ L +PQ+HPQP GE++RAS+SR NN G+S
Sbjct: 452 ASIQWQEV*WAPREVISTVSFHRL*HPQNHPQP*GEQVRASQSRANNRGKS 604
Score = 61.1 bits (127), Expect(2) = 2e-039
Identities = 24/36 (66%), Positives = 28/36 (77%)
Frame = -2 / -3
Query: 588 LHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWR 481
+HP+AVDG EG D SSQ +SLP+EPIK PA VWR
Sbjct: 560 VHPMAVDGFEGVRDGGSSQWISLPLEPIKLPATVWR 453
Score = 51.0 bits (105), Expect(2) = 1e-025
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +2 / +1
Query: 485 HTAAGNLMGSMGSDSRCELQLSPKPSTPSTATG 583
HT AG+LMGS GSD CEL S PS PSTA G
Sbjct: 457 HTVAGSLMGSKGSDIHCELPPSLTPSKPSTAIG 555
>gb|BM816351.1|BM816351 HB106B06_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106B06_SK.ab1 similar to (AC022464) F22G5.23
[Arabidopsis thaliana],(AC025783) putative C-4 sterol
methyl oxidase [Oryza sativa], mRNA sequence
Length = 918
Score = 215 bits (463), Expect = 6e-055
Identities = 75/174 (43%), Positives = 109/174 (62%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P + SYPA K M +R+ LPLP + +Q+ YF++ED++ YW HR LHTKW Y+ +H
Sbjct: 64 PYQLISYPAAKIMDIRTGLPLPSMGEIAAQLTVYFLVEDYLNYWLHRLLHTKWCYEKIHH 243
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
VHHE+ P + Y H AE+L L + GPAL H+ TLW+W R++E++ HSG+
Sbjct: 244 VHHEFTAPMAYAAWYGHWAEMLILAVPSLAGPALVPCHVTTLWIWFAARLVESLNIHSGF 423
Query: 524 HFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
P++ ++P YGG++ HDYHH + N+A F Y D+++GTDK YR K
Sbjct: 424 KLPFNAEKYIPFYGGAEHHDYHHYIGGQSKSNFAPVFTYCDYIYGTDKGYRYHK 585
>gb|BQ468531.1|BQ468531 HM01I09T HM Hordeum vulgare subsp. vulgare cDNA clone HM01I09
5-PRIME, mRNA sequence
Length = 640
Score = 213 bits (459), Expect = 2e-054
Identities = 75/174 (43%), Positives = 108/174 (62%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P + SYPA K M +R+ LPLP + +Q+ YF+ ED++ YW HR LHTKW Y+ +H
Sbjct: 40 PYQLISYPAAKIMDIRTGLPLPSMGEIAAQLTVYFLEEDYLNYWLHRLLHTKWCYEKIHH 219
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
VHHE+ P + Y H AE+L L + GPAL H+ TLW+W R++E++ HSG+
Sbjct: 220 VHHEFTAPMAYAAWYGHWAEMLILAVPSLAGPALVPCHVTTLWIWFAARLVESLNIHSGF 399
Query: 524 HFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
P++ ++P YGG++ HDYHH + N+A F Y D+++GTDK YR K
Sbjct: 400 KLPFNAEKYIPFYGGAEHHDYHHYIGGQSKSNFAPVFTYCDYIYGTDKGYRYHK 561
>gb|CB881416.1|CB881416 HM09L23w HM Hordeum vulgare subsp. vulgare cDNA clone HM09L23
3-PRIME, mRNA sequence
Length = 576
Score = 122 bits (261), Expect(2) = 5e-039
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = -3 / -1
Query: 485 GGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKNL*IVEA 318
G SDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDK YRK K +E +EGK+L*IVEA
Sbjct: 453 GSSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYRKTKAMEGEEGKHL*IVEA 286
Score = 109 bits (233), Expect(2) = 2e-047
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -3 / -1
Query: 605 LTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHH 456
LTGPHLFTLWLWMV VLETVEAHSGYHFPWSPSNFLPLYGGS +H
Sbjct: 576 LTGPHLFTLWLWMV*GVLETVEAHSGYHFPWSPSNFLPLYGGSSDFHDYH 427
Score = 100 bits (214), Expect(2) = 2e-047
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -1 / -2
Query: 484 AARTSMTTITVCCTQSQGTMPQHLFTWTGCSARTRIIARQRPLRRKKGKICRLWKLLS 311
AA TSMTTI VC T SQGT P LFTWTGC A+ R+IARQ+P + KKG IC+LWKLLS
Sbjct: 452 AALTSMTTIIVCSTPSQGTTPLLLFTWTGCLAQIRVIARQKPWKGKKGSICKLWKLLS 279
Score = 97.3 bits (206), Expect(2) = 2e-032
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = +1 / +2
Query: 319 ASTIYRFFPSFSSMVFALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPP 486
ASTIY+ FPS SM F LR* LSVPNNQSM*T VEA*FPD V STR*W*SWKSE P
Sbjct: 287 ASTIYKCFPSSPSMAFVLR*PLSVPNNQSM*TKVEA*FPDLV*STR*W*SWKSELP 454
Score = 97.3 bits (206), Expect(2) = 5e-037
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +3 / +1
Query: 315 SSFHNLQIFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAA 485
SSFHNLQ+ PFF +G CLAI L+ A+QPVHVNK G+VP*L V+HT+MVVMEVRAA
Sbjct: 283 SSFHNLQMLPFFPFHGFCLAITLICAKQPVHVNKSRGVVP*LGVEHTMMVVMEVRAA 453
Score = 86.3 bits (182), Expect(2) = 7e-025
Identities = 37/56 (66%), Positives = 39/56 (69%)
Frame = +2 / +3
Query: 314 EQLPQSTDFSLLSPQWSLPCDNPCPCRTTSPCKQMLRHSSLTLCTAHGDGSHGSPS 481
E LPQ T+ SLL W L CDNP C+TTSPCKQ R SSLT C AH DGSHGS S
Sbjct: 282 E*LPQFTNASLLPLPWLLSCDNPYLCQTTSPCKQK*RRSSLTWCRAHDDGSHGSQS 449
Score = 78.0 bits (164), Expect(2) = 5e-037
Identities = 34/41 (82%), Positives = 35/41 (85%)
Frame = +1 / +2
Query: 481 PPYSGRKFDGLHGK**PL*ASTVSKTLNTIHSHRVKR*GPV 603
PPYSGRKFDGL GK* PL*ASTVS T TIHSHRV +*GPV
Sbjct: 452 PPYSGRKFDGLQGK*YPL*ASTVSNTPQTIHSHRVNK*GPV 574
Score = 62.5 bits (130), Expect(2) = 2e-032
Identities = 26/42 (61%), Positives = 35/42 (83%)
Frame = +3 / +1
Query: 480 AAIQRQEI*WAPWEVIAAVSFNCLQNPQHHPQPQGEEMRASK 605
A+IQ QE+*WAP EVI+ VSF+ L +P +HPQP GE++RAS+
Sbjct: 451 ASIQWQEV*WAPREVISTVSFHRL*HPSNHPQP*GEQVRASQ 576
Score = 59.7 bits (124), Expect(2) = 5e-039
Identities = 23/36 (63%), Positives = 28/36 (77%)
Frame = -2 / -3
Query: 588 LHPVAVDGVEGFGDS*SSQRLSLPMEPIKFPAAVWR 481
+HP+AVDG+ G D SSQ +SLP+EPIK PA VWR
Sbjct: 559 VHPMAVDGLRGVRDGGSSQWISLPLEPIKLPATVWR 452
Score = 48.3 bits (99), Expect(2) = 7e-025
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = +2 / +3
Query: 485 HTAAGNLMGSMGSDSRCELQLSPKPSTPSTATG 583
HT AG+LMGS GSD CEL S P PSTA G
Sbjct: 456 HTVAGSLMGSKGSDIHCELPPSLTPLKPSTAIG 554
>gb|BU980982.1|BU980982 HA22E16r HA Hordeum vulgare subsp. vulgare cDNA clone HA22E16
5-PRIME, mRNA sequence
Length = 644
Score = 165 bits (354), Expect(2) = 2e-047
Identities = 56/126 (44%), Positives = 83/126 (65%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYPA K +G+ + LPLP + +Q++ YF++ED++ YW HR LH +W Y+ +H
Sbjct: 214 PLQLVSYPAVKMVGIHTGLPLPSLGEMAAQLVVYFLVEDYLNYWIHRLLHGEWGYEKIHR 393
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
+HHEY P G + YAH AE+L LG GPA+ H+ T WLW++LR +E ++ HSG+
Sbjct: 394 IHHEYTAPIGFAAPYAHWAEVLILGIPSFAGPAIAPGHMITFWLWIILRQMEAIDTHSGF 573
Query: 524 HFPWSP 507
FP P
Sbjct: 574 *FPIQP 591
Score = 45.1 bits (92), Expect(2) = 2e-047
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = -3 / +2
Query: 527 YHFPWSPSNFLPLYGGSDFHDYHH 456
+ FP+S + ++P YGG+++HDYHH
Sbjct: 572 FDFPFSLTKYIPFYGGAEYHDYHH 643
>gb|BM816352.1|BM816352 HB106C03_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB106C03_SK.ab1 similar to (AC022464) F22G5.23
[Arabidopsis thaliana],(AC025783) putative C-4 sterol
methyl oxidase [Oryza sativa], mRNA sequence
Length = 903
Score = 186 bits (400), Expect = 3e-046
Identities = 63/148 (42%), Positives = 94/148 (63%)
Frame = -3 / +2
Query: 806 VVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHSVHHEYATPFGLTSEYAHPAEILFLGF 627
+ +Q+ YF++ED++ YW HR LHTKW Y+ +H VHHE+ P + Y H AE+L L
Sbjct: 59 IAAQLTVYFLVEDYLNYWLHRLLHTKWCYEKIHHVHHEFTAPMAYAAWYGHWAEMLILAV 238
Query: 626 APVVGPALTGPHLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVL 447
+ GPAL H+ TLW+W R++E++ HSG+ P++ ++P YGG++ HDYHH +
Sbjct: 239 PSLAGPALVPCHVTTLWIWFAARLVESLNIHSGFKLPFNAEKYIPFYGGAEHHDYHHYIG 418
Query: 446 YTKSGNYASTFVYMDWLFGTDKDYRKAK 363
N+A F Y D+++GTDK YR K
Sbjct: 419 GQSKSNFAPVFTYCDYIYGTDKGYRYHK 502
>gb|BF622942.3|BF622942 HVSMEa0012C24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012C24f, mRNA sequence
Length = 803
Score = 178 bits (384), Expect = 5e-044
Identities = 63/145 (43%), Positives = 90/145 (62%)
Frame = -3 / +3
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYPA K +G+ + LPLP + +Q++ YF++ED++ YW HR LH +W Y+ +H
Sbjct: 324 PLQLVSYPAVKMVGIHTGLPLPSLGEMAAQLVVYFLVEDYLNYWIHRLLHGEWGYEKIHR 503
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
+HHEY P G + YAH AE+L LG GPA+ H+ T WLW++LR +E ++ HSG
Sbjct: 504 IHHEYTAPIGFAAPYAHWAEVLILGIPSFAGPAIAPGHMITFWLWIILRQMEAIDTHSGX 683
Query: 524 HFPWSPSNFLPLYGGSDFHDYHHRV 450
FP P + S HDYHH V
Sbjct: 684 *FPIQPDKVYSVLWESRIHDYHHYV 758
>gb|CA015797.1|CA015797 HV11O17u HV Hordeum vulgare subsp. vulgare cDNA clone HV11O17
3-PRIME, mRNA sequence
Length = 536
Score = 177 bits (382), Expect = 9e-044
Identities = 68/75 (90%), Positives = 71/75 (94%)
Frame = -3 / -2
Query: 542 EAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
EAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDK YRK K
Sbjct: 535 EAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYRKTK 356
Query: 362 TIEEKEGKNL*IVEA 318
+E +EGK+L*IVEA
Sbjct: 355 AMEGEEGKHL*IVEA 311
Score = 137 bits (293), Expect = 2e-031
Identities = 63/75 (84%), Positives = 64/75 (85%)
Frame = +1 / +3
Query: 319 ASTIYRFFPSFSSMVFALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGR 498
ASTIY+ FPS SM F LR* LSVPNNQSM*T VEA*FPD V STR*W*SWKSEPPYSGR
Sbjct: 312 ASTIYKCFPSSPSMAFVLR*PLSVPNNQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGR 491
Query: 499 KFDGLHGK**PL*AS 543
KFDGL GK* PL*AS
Sbjct: 492 KFDGLQGK*YPL*AS 536
Score = 131 bits (280), Expect = 1e-029
Identities = 54/77 (70%), Positives = 59/77 (76%)
Frame = -1 / -3
Query: 541 KLTAAITSHGAHQISCRCMAARTSMTTITVCCTQSQGTMPQHLFTWTGCSARTRIIARQR 362
KLT ITS GAHQ SC CM A TSMTTI VC T SQGT P LFTWTGC A+ R+IARQ+
Sbjct: 534 KLTVDITSLGAHQTSCHCMEALTSMTTIIVCSTPSQGTTPLLLFTWTGCLAQIRVIARQK 355
Query: 361 PLRRKKGKICRLWKLLS 311
P + KKG IC+LWKLLS
Sbjct: 354 PWKGKKGSICKLWKLLS 304
Score = 126 bits (270), Expect = 2e-028
Identities = 54/76 (71%), Positives = 64/76 (84%)
Frame = +3 / +2
Query: 315 SSFHNLQIFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQR 494
SSFHNLQ+ PFF +G CLAI L+ A+QPVHVNK G+VP*L V+HT+MVVMEVRA+IQ
Sbjct: 308 SSFHNLQMLPFFPFHGFCLAITLICAKQPVHVNKSRGVVP*LGVEHTMMVVMEVRASIQW 487
Query: 495 QEI*WAPWEVIAAVSF 542
QE+*WAP EVI+ VSF
Sbjct: 488 QEV*WAPREVISTVSF 535
Score = 119 bits (254), Expect = 4e-026
Identities = 51/76 (67%), Positives = 54/76 (71%)
Frame = +2 / +1
Query: 314 EQLPQSTDFSLLSPQWSLPCDNPCPCRTTSPCKQMLRHSSLTLCTAHGDGSHGSPSRHTA 493
E LPQ T+ SLL W L CDNP C+TTSPCKQ R SSLT C AH DGSHGS S HT
Sbjct: 307 E*LPQFTNASLLPLPWLLSCDNPYLCQTTSPCKQK*RRSSLTWCRAHDDGSHGSQSLHTV 486
Query: 494 AGNLMGSMGSDSRCEL 541
AG+LMGS GSD CEL
Sbjct: 487 AGSLMGSKGSDIHCEL 534
Score = 115 bits (246), Expect = 5e-025
Identities = 52/76 (68%), Positives = 57/76 (75%)
Frame = -2 / -1
Query: 540 SSQRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKVRELCLNICLHGLVVRHGQGLSQGKD 361
SSQ +SLP+EPIK PA VWRL LP*LPS CA+H+VREL L CLHGLVV H GLSQ K
Sbjct: 533 SSQWISLPLEPIKLPATVWRL*LP*LPSSCALHQVRELRLYFCLHGLVVWHR*GLSQDKS 354
Query: 360 H*GERREKSVDCGSCS 313
H RRE V+CGS S
Sbjct: 353 HGRGRREAFVNCGSYS 306
>gb|BU974893.1|BU974893 HB29G22r BC Hordeum vulgare subsp. vulgare cDNA clone HB29G22
5-PRIME, mRNA sequence
Length = 499
Score = 170 bits (365), Expect = 2e-041
Identities = 65/72 (90%), Positives = 68/72 (94%)
Frame = -3 / +2
Query: 533 SGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIE 354
SGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDK YRK K +E
Sbjct: 2 SGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYRKTKAME 181
Query: 353 EKEGKNL*IVEA 318
+EGK+L*IVEA
Sbjct: 182 GEEGKHL*IVEA 217
Score = 133 bits (284), Expect = 3e-030
Identities = 60/72 (83%), Positives = 61/72 (84%)
Frame = +1 / -2
Query: 319 ASTIYRFFPSFSSMVFALR*SLSVPNNQSM*TNVEA*FPDFVYSTR*W*SWKSEPPYSGR 498
ASTIY+ FPS SM F LR* LSVPNNQSM*T VEA*FPD V STR*W*SWKSEPPYSGR
Sbjct: 216 ASTIYKCFPSSPSMAFVLR*PLSVPNNQSM*TKVEA*FPDLV*STR*W*SWKSEPPYSGR 37
Query: 499 KFDGLHGK**PL 534
KFDGL GK* PL
Sbjct: 36 KFDGLQGK*YPL 1
Score = 125 bits (268), Expect = 5e-028
Identities = 51/72 (70%), Positives = 56/72 (77%)
Frame = -1 / +3
Query: 526 ITSHGAHQISCRCMAARTSMTTITVCCTQSQGTMPQHLFTWTGCSARTRIIARQRPLRRK 347
ITS GAHQ SC CM A TSMTTI VC T SQGT P LFTWTGC A+ R+IARQ+P + K
Sbjct: 9 ITSLGAHQTSCHCMEALTSMTTIIVCSTPSQGTTPLLLFTWTGCLAQIRVIARQKPWKGK 188
Query: 346 KGKICRLWKLLS 311
KG IC+LWKLLS
Sbjct: 189 KGSICKLWKLLS 224
Score = 120 bits (256), Expect = 2e-026
Identities = 51/72 (70%), Positives = 61/72 (84%)
Frame = +3 / -1
Query: 315 SSFHNLQIFPFFLLNGLCLAIILVRAEQPVHVNKC*GIVP*LCVQHTVMVVMEVRAAIQR 494
SSFHNLQ+ PFF +G CLAI L+ A+QPVHVNK G+VP*L V+HT+MVVMEVRA+IQ
Sbjct: 220 SSFHNLQMLPFFPFHGFCLAITLICAKQPVHVNKSRGVVP*LGVEHTMMVVMEVRASIQW 41
Query: 495 QEI*WAPWEVIA 530
QE+*WAP EVI+
Sbjct: 40 QEV*WAPREVIS 5
Score = 111 bits (238), Expect = 6e-024
Identities = 48/71 (67%), Positives = 51/71 (71%)
Frame = +2 / -3
Query: 314 EQLPQSTDFSLLSPQWSLPCDNPCPCRTTSPCKQMLRHSSLTLCTAHGDGSHGSPSRHTA 493
E LPQ T+ SLL W L CDNP C+TTSPCKQ R SSLT C AH DGSHGS S HT
Sbjct: 221 E*LPQFTNASLLPLPWLLSCDNPYLCQTTSPCKQK*RRSSLTWCRAHDDGSHGSQSLHTV 42
Query: 494 AGNLMGSMGSD 526
AG+LMGS GSD
Sbjct: 41 AGSLMGSKGSD 9
Score = 111 bits (238), Expect = 6e-024
Identities = 50/74 (67%), Positives = 55/74 (74%)
Frame = -2 / +1
Query: 534 QRLSLPMEPIKFPAAVWRLGLP*LPSPCAVHKVRELCLNICLHGLVVRHGQGLSQGKDH* 355
Q +SLP+EPIK PA VWRL LP*LPS CA+H+VREL L CLHGLVV H GLSQ K H
Sbjct: 1 QWISLPLEPIKLPATVWRL*LP*LPSSCALHQVRELRLYFCLHGLVVWHR*GLSQDKSHG 180
Query: 354 GERREKSVDCGSCS 313
RRE V+CGS S
Sbjct: 181 RGRREAFVNCGSYS 222
>gb|AL507854.1|AL507854 AL507854 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07A18V 5',
mRNA sequence
Length = 700
Score = 155 bits (334), Expect = 4e-037
Identities = 53/123 (43%), Positives = 79/123 (64%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYPA K +G+ + LPLP + +Q++ YF++ED++ YW HR LH +W Y+ +H
Sbjct: 331 PLQLVSYPAVKMVGIHTGLPLPSLGEMAAQLVVYFLVEDYLNYWIHRLLHGEWGYEKIHR 510
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAHSGY 525
+HHEY P G + YAH AE+L LG GPA+ H+ T WLW++LR +E ++ H
Sbjct: 511 IHHEYTAPIGFAAPYAHWAEVLILGIPSFAGPAIAPGHMITFWLWIILRQMEAIDTHKRX 690
Query: 524 HFP 516
FP
Sbjct: 691 *FP 699
>gb|CA009082.1|CA009082 HU13C01r HU Hordeum vulgare subsp. vulgare cDNA clone HU13C01
5-PRIME, mRNA sequence
Length = 611
Score = 142 bits (305), Expect = 4e-033
Identities = 48/108 (44%), Positives = 71/108 (65%)
Frame = -3 / +2
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYPA K +G+ + LPLP + +Q++ YF++ED++ YW HR LH +W Y+ +H
Sbjct: 287 PLQLVSYPAVKMVGIHTGLPLPSLGEMAAQLVVYFLVEDYLNYWIHRLLHGEWGYEKIHR 466
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVL 561
+HHEY P G + YAH AE+L LG GPA+ H+ T WLW++L
Sbjct: 467 IHHEYTAPIGFAAPYAHWAEVLILGIPSFAGPAIAPGHMITFWLWIIL 610
>gb|BJ456266.1|BJ456266 BJ456266 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20f03 3', mRNA sequence
Length = 610
Score = 139 bits (299), Expect = 2e-032
Identities = 48/117 (41%), Positives = 71/117 (60%)
Frame = -3 / -1
Query: 713 VHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAH 534
+H VHHE+ P + Y H AE+L L + GPAL H+ TLW+W R++E++ H
Sbjct: 556 IHHVHHEFTAPMAYAAWYGHWAEMLILAVPSLAGPALVPCHVTTLWIWFAARLVESLNIH 377
Query: 533 SGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAK 363
SG+ P++ ++P YGG++ HDYHH + N+A F Y D+++GTDK YR K
Sbjct: 376 SGFKLPFNAEKYIPFYGGAEHHDYHHYIGGQSKSNFAPVFTYCDYIYGTDKGYRYHK 206
>gb|BM445019.2|BM445019 EBem09_SQ007_D04_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ007_D04 5', mRNA sequence
Length = 340
Score = 134 bits (287), Expect = 1e-030
Identities = 45/111 (40%), Positives = 68/111 (61%)
Frame = -3 / +3
Query: 713 VHSVHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLWLWMVLRVLETVEAH 534
+H VHHE+ P + Y H AE+L L + GPAL H+ TLW+W R++E++ H
Sbjct: 3 IHHVHHEFTAPMAYAAWYGHWAEMLILAVPSLAGPALVPCHVTTLWIWFAARLVESLNIH 182
Query: 533 SGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTFVYMDWLFGTDK 381
SG+ P++ ++P YGG++ HDYHH + N+A F Y D+++GTDK
Sbjct: 183 SGFKLPFNAEKYIPFYGGAEHHDYHHYIGGQSKSNFAPVFTYCDYIYGTDK 335
>gb|BM374601.1|BM374601 EBma05_SQ002_C03_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ002_C03 5', mRNA sequence
Length = 398
Score = 117 bits (251), Expect = 1e-025
Identities = 46/53 (86%), Positives = 49/53 (92%)
Frame = -3 / +1
Query: 476 DFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKNL*IVEA 318
DFHDYHHRVLYTKSGNYASTFVYMDWLFGTDK YRK K +E +EGK+L*IVEA
Sbjct: 1 DFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYRKTKAMEGEEGKHL*IVEA 159
>gb|BG415905.2|BG415905 HVSMEk0008P01f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0008P01f, mRNA sequence
Length = 657
Score = 117 bits (250), Expect = 1e-025
Identities = 41/103 (39%), Positives = 64/103 (62%)
Frame = -3 / +1
Query: 884 PVMIFSYPAFKFMGLRSSLPLPHWSVVVSQVLFYFVLEDFIFYWGHRALHTKWLYKHVHS 705
P+ + SYPA K +G+ + LPLP + + ++ YF++ED++ YW HR LH +W ++++H
Sbjct: 31 PLQLVSYPAVKMVGIHTGLPLPSLGEMAAHLVVYFLVEDYLNYWIHRLLHGEWGFENIHR 210
Query: 704 VHHEYATPFGLTSEYAHPAEILFLGFAPVVGPALTGPHLFTLW 576
+ HE P G + YAH AE+L LG GPA H+ +LW
Sbjct: 211 IPHESTAPIGFAAPYAHWAEVLILGIPSFSGPAFAPAHINSLW 339
>gb|BQ664756.1|BQ664756 HV04L17u HV Hordeum vulgare subsp. vulgare cDNA clone HV04L17
3-PRIME, mRNA sequence
Length = 615
Score = 115 bits (245), Expect = 7e-025
Identities = 45/52 (86%), Positives = 48/52 (92%)
Frame = -3 / -3
Query: 473 FHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKNL*IVEA 318
FHDYHHRVLYTKSGNYASTFVYMDWLFGTDK YRK K +E +EGK+L*IVEA
Sbjct: 613 FHDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYRKTKAMEGEEGKHL*IVEA 458
>gb|CA010209.1|CA010209 HT11C14u HT Hordeum vulgare subsp. vulgare cDNA clone HT11C14
3-PRIME, mRNA sequence
Length = 549
Score = 113 bits (242), Expect = 2e-024
Identities = 36/74 (48%), Positives = 54/74 (72%)
Frame = -3 / -2
Query: 593 HLFTLWLWMVLRVLETVEAHSGYHFPWSPSNFLPLYGGSDFHDYHHRVLYTKSGNYASTF 414
H+ T WLW++LR +E ++ HSG+ FP+S + ++P YGG+++HDYHH V N+AS F
Sbjct: 548 HMITFWLWIILRQMEAIDTHSGFDFPFSLTKYIPFYGGAEYHDYHHYVGGQSQSNFASVF 369
Query: 413 VYMDWLFGTDKDYR 372
Y D+L+GTD+ YR
Sbjct: 368 TYCDYLYGTDRGYR 327
>gb|BI780945.1|BI780945 EBma05_SQ001_J20_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ001_J20 5', mRNA sequence
Length = 398
Score = 111 bits (237), Expect = 9e-024
Identities = 44/53 (83%), Positives = 48/53 (90%)
Frame = -3 / +1
Query: 476 DFHDYHHRVLYTKSGNYASTFVYMDWLFGTDKDYRKAKTIEEKEGKNL*IVEA 318
D+ DYHHRVLYTKSGNYASTFVYMDWLFGTDK YRK K +E +EGK+L*IVEA
Sbjct: 1 DWDDYHHRVLYTKSGNYASTFVYMDWLFGTDKGYRKTKAMEGEEGKHL*IVEA 159
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 623,680,662
Number of Sequences: 312970
Number of extensions: 10060139
Number of successful extensions: 76594
Number of sequences better than 1.0e-020: 37
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 16005864527
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)