TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161072.2.1
(1197 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenyl... 210 e-125
emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenyl... 172 1e-099
gb|BF265916.1|BF265916 HV_CEa0013K19f Hordeum vulgare seedl... 192 2e-098
gb|BI956808.1|BI956808 HVSMEn0005G21f Hordeum vulgare rachi... 187 4e-096
gb|BF261029.2|BF261029 HVSMEf0023J05f Hordeum vulgare seedl... 210 3e-094
gb|BQ765924.1|BQ765924 EBro03_SQ008_E16_R root, 3 week, wat... 192 9e-094
gb|BM816193.1|BM816193 HC109D04_T3.ab1 HC Hordeum vulgare s... 156 4e-093
gb|BQ763878.1|BQ763878 EBro03_SQ005_L15_R root, 3 week, wat... 192 9e-091
gb|BE214612.2|BE214612 HV_CEb0003P13f Hordeum vulgare seedl... 210 2e-090
gb|AV926975.1|AV926975 AV926975 K. Sato unpublished cDNA li... 210 4e-084
gb|BI957512.1|BI957512 HVSMEn0009P04f Hordeum vulgare rachi... 210 6e-084
gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, dro... 178 2e-083
gb|BG365997.1|BG365997 HVSMEi0004M09f Hordeum vulgare 20 DA... 185 2e-083
gb|AL505417.1|AL505417 AL505417 Hordeum vulgare Barke roots... 210 2e-079
gb|BI957553.1|BI957553 HVSMEn0010B19f Hordeum vulgare rachi... 206 2e-079
gb|BI960030.1|BI960030 HVSMEn0022P01f Hordeum vulgare rachi... 210 4e-079
gb|BI959619.1|BI959619 HVSMEn0020H03f Hordeum vulgare rachi... 210 1e-077
gb|BI959468.1|BI959468 HVSMEn0019M15f Hordeum vulgare rachi... 209 1e-077
gb|BF628845.2|BF628845 HVSMEb0008N10f Hordeum vulgare seedl... 162 1e-077
gb|BQ469057.1|BQ469057 HM03D09r HM Hordeum vulgare subsp. v... 163 3e-077
gb|BI958535.1|BI958535 HVSMEn0015H19f Hordeum vulgare rachi... 209 5e-076
gb|AV912724.1|AV912724 AV912724 K. Sato unpublished cDNA li... 210 4e-075
gb|AV926974.1|AV926974 AV926974 K. Sato unpublished cDNA li... 210 1e-074
gb|BI957636.1|BI957636 HVSMEn0010H09f Hordeum vulgare rachi... 209 3e-073
gb|BI959811.1|BI959811 HVSMEn0021K21f Hordeum vulgare rachi... 210 1e-072
gb|AV923115.1|AV923115 AV923115 K. Sato unpublished cDNA li... 210 1e-072
gb|BI958293.1|BI958293 HVSMEn0014E11f Hordeum vulgare rachi... 207 7e-072
gb|AV925745.1|AV925745 AV925745 K. Sato unpublished cDNA li... 203 1e-071
gb|BG414191.1|BG414191 HVSMEk0001A07f Hordeum vulgare testa... 192 1e-070
gb|BM816192.1|BM816192 HC110D06_T3.ab1 HC Hordeum vulgare s... 199 2e-070
gb|BI956268.1|BI956268 HVSMEn0001M16f Hordeum vulgare rachi... 186 3e-069
gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hyd... 150 8e-068
gb|BI959849.1|BI959849 HVSMEn0022A20f Hordeum vulgare rachi... 194 1e-067
gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. v... 145 5e-067
gb|BM372206.2|BM372206 EBro03_SQ004_F04_R root, 3 week, wat... 209 3e-066
gb|AL505275.1|AL505275 AL505275 Hordeum vulgare Barke roots... 145 5e-066
gb|AV917458.1|AV917458 AV917458 K. Sato unpublished cDNA li... 192 4e-065
gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, dro... 154 6e-065
gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. v... 139 5e-064
gb|BI779552.2|BI779552 EBro01_SQ004_G11_R root, 3 week, hyd... 183 2e-063
gb|BJ451668.1|BJ451668 BJ451668 K. Sato unpublished cDNA li... 180 2e-062
gb|BI959802.1|BI959802 HVSMEn0021J20f Hordeum vulgare rachi... 152 4e-062
gb|AV913531.1|AV913531 AV913531 K. Sato unpublished cDNA li... 182 2e-061
gb|BF255291.2|BF255291 HVSMEf0006H12f Hordeum vulgare seedl... 177 2e-061
gb|BE214036.1|BE214036 HV_CEb0001P14f Hordeum vulgare seedl... 114 1e-060
gb|AJ427587.1|AJ427587 AJ427587 Hordeum vulgare subsp. vulg... 177 2e-060
gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. v... 139 3e-060
gb|BU988288.1|BU988288 HF17D09r HF Hordeum vulgare subsp. v... 205 3e-060
gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA li... 127 5e-060
gb|AV928635.1|AV928635 AV928635 K. Sato unpublished cDNA li... 192 2e-059
gb|AL504786.1|AL504786 AL504786 Hordeum vulgare Barke roots... 159 1e-058
gb|AV931028.1|AV931028 AV931028 K. Sato unpublished cDNA li... 192 2e-058
gb|BU989823.1|BU989823 HF22M18r HF Hordeum vulgare subsp. v... 139 2e-056
gb|BU990169.1|BU990169 HF24E14r HF Hordeum vulgare subsp. v... 139 2e-056
gb|BQ766648.1|BQ766648 EBro08_SQ006_A20_R root, 3 week, dro... 182 5e-056
gb|AV926549.1|AV926549 AV926549 K. Sato unpublished cDNA li... 149 9e-056
gb|BG310118.1|BG310118 HVSMEc0016N14f Hordeum vulgare seedl... 139 4e-055
gb|BF254022.2|BF254022 HVSMEf0002M12f Hordeum vulgare seedl... 110 7e-055
gb|BQ767217.1|BQ767217 EBro08_SQ008_E10_R root, 3 week, dro... 150 7e-054
gb|AL503927.1|AL503927 AL503927 Hordeum vulgare Barke roots... 117 7e-054
gb|BU996801.1|BU996801 HM14M22r HM Hordeum vulgare subsp. v... 149 3e-053
gb|AV926550.1|AV926550 AV926550 K. Sato unpublished cDNA li... 137 6e-052
gb|AV921319.1|AV921319 AV921319 K. Sato unpublished cDNA li... 155 8e-052
gb|BQ768383.1|BQ768383 EBro08_SQ011_F13_R root, 3 week, dro... 139 2e-051
gb|AV931810.1|AV931810 AV931810 K. Sato unpublished cDNA li... 192 3e-051
gb|AV928004.1|AV928004 AV928004 K. Sato unpublished cDNA li... 192 5e-050
gb|AV919005.1|AV919005 AV919005 K. Sato unpublished cDNA li... 192 7e-050
gb|BQ767318.1|BQ767318 EBro08_SQ008_F18_R root, 3 week, dro... 182 3e-049
gb|AV919053.1|AV919053 AV919053 K. Sato unpublished cDNA li... 146 5e-048
gb|BU973291.1|BU973291 HB24G20r BC Hordeum vulgare subsp. v... 149 1e-047
gb|CB880955.1|CB880955 HM08F11w HM Hordeum vulgare subsp. v... 189 2e-047
gb|BI957150.1|BI957150 HVSMEn0007M14f Hordeum vulgare rachi... 88 2e-046
gb|AV931809.1|AV931809 AV931809 K. Sato unpublished cDNA li... 185 5e-046
gb|BQ762501.1|BQ762501 EBro02_SQ004_F04 _R root, 3 week, hy... 178 9e-046
gb|BM370557.2|BM370557 EBro08_SQ004_J10_R root, 3 week, dro... 155 1e-045
gb|AV930308.1|AV930308 AV930308 K. Sato unpublished cDNA li... 183 2e-045
gb|BI958633.1|BI958633 HVSMEn0016A07f Hordeum vulgare rachi... 99 2e-045
gb|AV914027.1|AV914027 AV914027 K. Sato unpublished cDNA li... 156 4e-045
gb|BI777236.2|BI777236 EBro03_SQ002_I15_R root, 3 week, wat... 133 8e-045
gb|BI959376.1|BI959376 HVSMEn0019H01f Hordeum vulgare rachi... 181 9e-045
gb|AV930975.1|AV930975 AV930975 K. Sato unpublished cDNA li... 181 9e-045
gb|BM372199.2|BM372199 EBro03_SQ004_E20_R root, 3 week, wat... 155 4e-044
gb|BI959927.1|BI959927 HVSMEn0022G20f Hordeum vulgare rachi... 108 1e-043
gb|AV919026.1|AV919026 AV919026 K. Sato unpublished cDNA li... 150 9e-043
gb|BF254075.2|BF254075 HVSMEf0002P06f Hordeum vulgare seedl... 99 1e-042
gb|AV928876.1|AV928876 AV928876 K. Sato unpublished cDNA li... 148 2e-042
gb|BF264601.3|BF264601 HV_CEa0009N21f Hordeum vulgare seedl... 164 3e-042
gb|BE438184.1|BE438184 SFR010.H12F990722 ITEC SFR Barley Le... 147 1e-041
gb|BJ468382.1|BJ468382 BJ468382 K. Sato unpublished cDNA li... 155 2e-041
gb|AV927824.1|AV927824 AV927824 K. Sato unpublished cDNA li... 77 3e-040
gb|AV918830.1|AV918830 AV918830 K. Sato unpublished cDNA li... 139 9e-040
gb|AV931622.1|AV931622 AV931622 K. Sato unpublished cDNA li... 164 1e-039
gb|BM443256.2|BM443256 EBro02_SQ003_E13_R root, 3 week, hyd... 150 2e-039
gb|AL503572.1|AL503572 AL503572 Hordeum vulgare Barke roots... 100 9e-039
gb|BE421683.1|BE421683 HWM012cG.10r ITEC HWM Barley Leaf Li... 160 2e-038
gb|AV926724.1|AV926724 AV926724 K. Sato unpublished cDNA li... 91 2e-038
gb|BI959804.1|BI959804 HVSMEn0021K01f Hordeum vulgare rachi... 96 1e-037
gb|AL501352.1|AL501352 AL501352 Hordeum vulgare Barke roots... 150 4e-037
gb|AL501346.1|AL501346 AL501346 Hordeum vulgare Barke roots... 155 5e-037
gb|AL501348.1|AL501348 AL501348 Hordeum vulgare Barke roots... 155 5e-037
gb|AL501349.1|AL501349 AL501349 Hordeum vulgare Barke roots... 155 5e-037
gb|AL502685.1|AL502685 AL502685 Hordeum vulgare Barke roots... 155 5e-037
gb|BJ452093.1|BJ452093 BJ452093 K. Sato unpublished cDNA li... 155 5e-037
gb|BJ465265.1|BJ465265 BJ465265 K. Sato unpublished cDNA li... 155 5e-037
gb|BJ468508.1|BJ468508 BJ468508 K. Sato unpublished cDNA li... 155 5e-037
gb|BI958448.1|BI958448 HVSMEn0015A23f Hordeum vulgare rachi... 94 5e-037
gb|BG369913.2|BG369913 HVSMEi0026I13f Hordeum vulgare 20 DA... 94 7e-037
gb|BF624772.2|BF624772 HVSMEa0017L07f Hordeum vulgare seedl... 88 9e-037
gb|BM442943.2|BM442943 EBro02_SQ001_P13_R root, 3 week, hyd... 105 9e-037
gb|BF258018.2|BF258018 HVSMEf0014I06f Hordeum vulgare seedl... 111 2e-036
gb|BU968202.1|BU968202 HB06L24r BC Hordeum vulgare subsp. v... 152 3e-036
emb|Z49147.1|HVPAL7RM H.vulgare partial PAL mRNA for phenyl... 91 4e-036
gb|AV921618.1|AV921618 AV921618 K. Sato unpublished cDNA li... 152 4e-036
gb|AV928881.1|AV928881 AV928881 K. Sato unpublished cDNA li... 152 4e-036
gb|BI957141.1|BI957141 HVSMEn0007L14f Hordeum vulgare rachi... 130 8e-036
gb|AL501350.1|AL501350 AL501350 Hordeum vulgare Barke roots... 150 1e-035
gb|BJ466939.1|BJ466939 BJ466939 K. Sato unpublished cDNA li... 150 1e-035
gb|BQ468898.1|BQ468898 HM02L09r HM Hordeum vulgare subsp. v... 150 1e-035
gb|BF259754.3|BF259754 HVSMEf0020C19f Hordeum vulgare seedl... 148 5e-035
gb|AV913713.1|AV913713 AV913713 K. Sato unpublished cDNA li... 85 9e-035
gb|BQ765396.1|BQ765396 EBro03_SQ007_E05_R root, 3 week, wat... 146 2e-034
gb|AV918666.1|AV918666 AV918666 K. Sato unpublished cDNA li... 145 4e-034
gb|BJ459164.1|BJ459164 BJ459164 K. Sato unpublished cDNA li... 145 4e-034
gb|BQ765192.1|BQ765192 EBro03_SQ006_A15_R root, 3 week, wat... 145 4e-034
gb|BQ765219.1|BQ765219 EBro03_SQ006_F15_R root, 3 week, wat... 145 4e-034
gb|BQ664513.1|BQ664513 HV03K13u HV Hordeum vulgare subsp. v... 145 5e-034
gb|BQ762717.1|BQ762717 EBro02_SQ004_I20_R root, 3 week, hyd... 145 5e-034
gb|AV923897.1|AV923897 AV923897 K. Sato unpublished cDNA li... 84 6e-034
gb|BI960417.1|BI960417 HVSMEn0024I12f Hordeum vulgare rachi... 75 8e-034
gb|AV914003.1|AV914003 AV914003 K. Sato unpublished cDNA li... 83 1e-033
gb|BI947758.1|BI947758 HVSMEl0006M12f Hordeum vulgare spike... 144 1e-033
gb|BI959878.1|BI959878 HVSMEn0022D03f Hordeum vulgare rachi... 112 2e-033
gb|BF265906.3|BF265906 HV_CEa0013K09f Hordeum vulgare seedl... 106 4e-033
gb|BM368745.2|BM368745 EBem08_SQ004_H21_R embryo, 40 DPA, n... 114 6e-033
gb|BI959574.1|BI959574 HVSMEn0020E07f Hordeum vulgare rachi... 141 6e-033
gb|AL502072.1|AL502072 AL502072 Hordeum vulgare Barke roots... 141 9e-033
gb|BQ661371.1|BQ661371 HM03D09u HM Hordeum vulgare subsp. v... 141 9e-033
gb|AV913368.1|AV913368 AV913368 K. Sato unpublished cDNA li... 79 2e-032
gb|BE437808.1|BE437808 SFR007.G02F990625 ITEC SFR Barley Le... 139 2e-032
gb|BE437962.1|BE437962 SFR009.D04F990512 ITEC SFR Barley Le... 139 2e-032
gb|BM100085.2|BM100085 EBma01_SQ001_C10_R maternal, 4 DPA, ... 126 3e-032
gb|AL503163.1|AL503163 AL503163 Hordeum vulgare Barke roots... 139 3e-032
gb|BQ756566.1|BQ756566 EBem09_SQ003_B12_R embryo, 1 Day ger... 139 3e-032
gb|BM442994.2|BM442994 EBro02_SQ002_C04_R root, 3 week, hyd... 77 6e-032
gb|AV923901.1|AV923901 AV923901 K. Sato unpublished cDNA li... 79 8e-032
gb|AL505744.1|AL505744 AL505744 Hordeum vulgare Barke roots... 72 2e-030
gb|AL502364.1|AL502364 AL502364 Hordeum vulgare Barke roots... 131 9e-030
gb|AL500991.1|AL500991 AL500991 Hordeum vulgare Barke roots... 130 1e-029
gb|BF260697.2|BF260697 HVSMEf0022L07f Hordeum vulgare seedl... 72 1e-029
gb|AL501962.1|AL501962 AL501962 Hordeum vulgare Barke roots... 128 5e-029
gb|BQ662656.1|BQ662656 HS03H24u HS Hordeum vulgare subsp. v... 128 5e-029
gb|AL505894.1|AL505894 AL505894 Hordeum vulgare Barke roots... 67 5e-029
gb|BG415885.2|BG415885 HVSMEk0008K04f Hordeum vulgare testa... 128 6e-029
gb|BE558376.3|BE558376 HV_CEb0017H01f Hordeum vulgare seedl... 127 1e-028
gb|CB858981.1|CB858981 HI08O15w HI Hordeum vulgare subsp. v... 125 6e-028
gb|BQ661267.1|BQ661267 HM02L09u HM Hordeum vulgare subsp. v... 122 5e-027
gb|AV925746.1|AV925746 AV925746 K. Sato unpublished cDNA li... 72 7e-027
gb|BQ760542.1|BQ760542 EBro03_SQ001_F05_R root, 3 week, wat... 120 2e-026
gb|BI778012.2|BI778012 EBro07_SQ001_N12_R root, 3 week, red... 72 3e-026
gb|CA016735.1|CA016735 HV06I16u HV Hordeum vulgare subsp. v... 119 4e-026
gb|BJ464216.1|BJ464216 BJ464216 K. Sato unpublished cDNA li... 66 4e-026
gb|BG343667.2|BG343667 HVSMEg0006C21f Hordeum vulgare pre-a... 118 7e-026
gb|BF254228.2|BF254228 HVSMEf0003G02f Hordeum vulgare seedl... 116 2e-025
gb|BI955715.1|BI955715 HVSMEm0024C22f Hordeum vulgare green... 115 6e-025
gb|AJ462386.1|AJ462386 AJ462386 S00002 Hordeum vulgare subs... 111 6e-024
gb|BQ765456.1|BQ765456 EBro03_SQ007_P05_R root, 3 week, wat... 111 1e-023
gb|AL501291.1|AL501291 AL501291 Hordeum vulgare Barke roots... 110 2e-023
gb|AL502617.1|AL502617 AL502617 Hordeum vulgare Barke roots... 99 5e-022
gb|AL501309.1|AL501309 AL501309 Hordeum vulgare Barke roots... 84 9e-022
gb|BE438019.1|BE438019 SFR010.A02F990628 ITEC SFR Barley Le... 104 9e-022
gb|BU983875.1|BU983875 HA31E23r HA Hordeum vulgare subsp. v... 54 2e-021
gb|CA027255.1|CA027255 HZ58F14r HZ Hordeum vulgare subsp. v... 66 5e-021
>emb|Z49146.1|HVPAL3MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1831 bp)
Length = 1831
Score = 210 bits (454), Expect(5) = e-125
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 837 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 1016
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 1017 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 1172
Score = 192 bits (414), Expect(5) = e-125
Identities = 76/111 (68%), Positives = 90/111 (81%)
Frame = -1 / +3
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 1161 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 1340
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 1341 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 1493
Score = 188 bits (404), Expect(4) = 1e-099
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 1171 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 992
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 991 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 812
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 811 TSWLCCS 791
Score = 148 bits (317), Expect(4) = 1e-099
Identities = 67/108 (62%), Positives = 69/108 (63%)
Frame = +2 / -1
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 1483 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 1304
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 1303 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 1160
Score = 72.1 bits (151), Expect(5) = e-125
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1 / +3
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGLTSNLAG P+ +GTEIAMASYCSELQY P+TN
Sbjct: 648 NNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPVTN 776
Score = 62.0 bits (129), Expect(4) = 1e-099
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2 / -1
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+ YWSSEQ*EAMAISVPL+ + G+ PAR EVSPL
Sbjct: 775 LVTGLARYWSSEQ*EAMAISVPLKP*SKLGLRLPARLEVSPL 650
Score = 58.3 bits (121), Expect(7) = 2e-042
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -3
Query: 355 DVDGQRLAVPLLEALEHGVHELALADADE 441
DVDGQ LAVPLLEALEHGV EL LADA+E
Sbjct: 1493 DVDGQGLAVPLLEALEHGVDELVLADAEE 1407
Score = 57.9 bits (120), Expect(7) = 2e-042
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -3
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 1172 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 1038
Score = 54.2 bits (112), Expect(6) = 6e-036
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +2
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 932 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 1033
Score = 50.1 bits (103), Expect(6) = 6e-036
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = -3 / +2
Query: 1195 QRAHLKPGRXRNPSLDYGFKGHRDRHGXXXXXAPVXGHPHHQP 1067
QRA L+PGR P L +GHRDRHG APV P QP
Sbjct: 650 QRADLQPGRQPQPQLGLRLQGHRDRHGFLLL*APVPCQPGDQP 778
Score = 48.7 bits (100), Expect(7) = 2e-042
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 938 DVLLKVAEVDGLAQRHHVCGGHELQDV 858
Score = 47.3 bits (97), Expect(6) = 6e-036
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3 / +2
Query: 544 QPVVPAVPLRARGARLRVPDRREA 473
+ VVPAVPLR RGARLRVP RREA
Sbjct: 1304 EQVVPAVPLRPRGARLRVPHRREA 1375
Score = 40.5 bits (82), Expect(6) = 6e-036
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 836 QEDRRGCGHPEAHVLHIH 889
Score = 37.7 bits (76), Expect(6) = 6e-036
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3 / +2
Query: 418 ARGPHARVPQGVGRQAAAHQ 359
A PHARVPQGV R+A AHQ
Sbjct: 1430 AHRPHARVPQGVERRAPAHQ 1489
Score = 33.6 bits (67), Expect(7) = 2e-042
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 776 VGHRVGKVLELRAVGSHGDLGA 711
Score = 31.3 bits (62), Expect(7) = 2e-042
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 835 AETRPREFTSW 803
Score = 29.9 bits (59), Expect(5) = e-125
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 801 NQDVNSLGLVSARK 842
Score = 27.6 bits (54), Expect(7) = 2e-042
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 1135 P*SRSPGWGC 1164
P*SRSP WGC
Sbjct: 711 P*SRSPSWGC 682
Score = 24.4 bits (47), Expect(4) = 1e-099
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 799 CCSALWTWLVTG 764
Score = 24.0 bits (46), Expect(6) = 6e-036
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 892 WRCARPSTSA 921
Score = 22.6 bits (43), Expect(5) = e-125
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 777 HVQSAEQH 800
Score = 22.6 bits (43), Expect(7) = 2e-042
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 1325 VQRERPALLDQV 1290
>emb|Z49145.1|HVPAL2MR H.vulgare partial PAL mRNA for phenylalanine ammonia-lyase (1670 bp)
Length = 1670
Score = 172 bits (370), Expect(5) = 1e-099
Identities = 73/112 (65%), Positives = 93/112 (83%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEAIDILKLMSST++VALCQA+DLRHLEEN+K +VK+ V VA+K L+ + +G L
Sbjct: 774 RKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVKTVARKTLSTDNNGHLHK 953
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARF EK+L+ IDREAVF YA+D S + PLMQK+RAVLV+HAL++G+AE +
Sbjct: 954 ARFCEKDLLLTIDREAVFAYADDPCSVNYPLMQKMRAVLVEHALANGEAEHD 1109
Score = 151 bits (324), Expect(5) = 1e-099
Identities = 61/104 (58%), Positives = 78/104 (75%)
Frame = -1 / +3
Query: 672 EPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVREELGCV 493
E SVF+K+ FE+ELRAVLP GTA NRI++ RS+PLYRFVR+ELG
Sbjct: 1113 ETSVFAKLATFEQELRAVLPTEVEAARSAVENGTAAQQNRISECRSYPLYRFVRKELGTE 1292
Query: 492 FLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPI 361
+LTGE+ +SPGEE +KVFV ++QGK +D +LECLKEW+G+PLPI
Sbjct: 1293 YLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPI 1424
Score = 140 bits (301), Expect(6) = 7e-047
Identities = 70/112 (62%), Positives = 78/112 (69%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S SASPL +A ST TAR FC+SG L L SSAY NTASRS+ SFS KRAL P
Sbjct: 1108 SCSASPLAKACSTRTARIFCMSG*LTLQGSSAYANTASRSIVSRRSFSQKRALWRWPLLS 929
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFL 1006
++S FLAT T T L FSSRWRRS AWH+AT V+DMSF MS+ASAVFL
Sbjct: 928 VLSVFLATVFTQLLTAFLTFSSRWRRSIAWHNATKNVEDMSFNMSMASAVFL 773
Score = 101 bits (216), Expect(2) = 9e-024
Identities = 52/117 (44%), Positives = 57/117 (48%)
Frame = +2 / -2
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HS RHS S LPW M TNTL SSPGD SPV+ + PSS RT R SG DR
Sbjct: 1420 GRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLRTNR*SGYDRH 1241
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASPLLRAWSTST 715
S IRF AVP N+ L NT+ S S S A + ST
Sbjct: 1240 SEIRFCCAAVPFSTALRAASTSVGNTARSSCSNVASLANTDVSTSCSASPLAKACST 1070
Score = 66.1 bits (138), Expect(5) = 1e-099
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = -1 / +3
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGL SNL+G P+ +G EIAMASYCSELQ+ G P+TN
Sbjct: 585 NNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 713
Score = 42.3 bits (86), Expect(6) = 7e-047
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +2 / -2
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+P SSEQ EAMAIS PL+ + G+ P R E PL
Sbjct: 712 LVTGLPKN*SSEQYEAMAISAPLKP*SKLGLRPPERLEGRPL 587
Score = 33.1 bits (66), Expect(2) = 9e-024
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1 / -1
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDVD 987
D+LLEVA++ LAQR HELQ V+
Sbjct: 875 DILLEVAEIDSLAQRDQECRGHELQYVN 792
Score = 32.2 bits (64), Expect(6) = 7e-047
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1 / -1
Query: 361 DGQRLAVPLLEALEHGVHELALADADEH 444
D Q L +PLL+AL+ V LAL +EH
Sbjct: 1424 DRQGLTIPLLQALKERVDVLALVHGNEH 1341
Score = 28.1 bits (55), Expect(5) = 1e-099
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGL+S+++
Sbjct: 738 NQDVNSLGLISSRK 779
Score = 27.2 bits (53), Expect(6) = 7e-047
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 616 QHRAELLLEPGDLGEH 663
QH ELLLE G LG+H
Sbjct: 1169 QHCPELLLERGKLGKH 1122
Score = 24.4 bits (47), Expect(6) = 7e-047
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 736 CCSALWTWLVTG 701
Score = 24.0 bits (46), Expect(6) = 7e-047
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / -2
Query: 1011 ETRPREFTSW 1040
E RPRE TSW
Sbjct: 769 EMRPRELTSW 740
Score = 22.6 bits (43), Expect(5) = 1e-099
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 714 HVQSAEQH 737
>gb|BF265916.1|BF265916 HV_CEa0013K19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013K19f, mRNA sequence
Length = 773
Score = 192 bits (414), Expect(2) = 2e-098
Identities = 76/111 (68%), Positives = 90/111 (81%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 292 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 471
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 472 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 624
Score = 188 bits (404), Expect(2) = 2e-098
Identities = 80/101 (79%), Positives = 92/101 (91%)
Frame = -1 / +1
Query: 972 LMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISA 793
LMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSSARFSEK LI+A
Sbjct: 1 LMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSSARFSEKSLITA 180
Query: 792 IDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
IDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 181 IDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 303
Score = 165 bits (354), Expect(2) = 3e-078
Identities = 74/100 (74%), Positives = 81/100 (81%)
Frame = +2 / -1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 302 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 123
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDM 970
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DM
Sbjct: 122 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDM 3
Score = 148 bits (317), Expect(2) = 3e-078
Identities = 67/108 (62%), Positives = 69/108 (63%)
Frame = +2 / -1
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 614 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 435
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 434 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 291
Score = 58.3 bits (121), Expect(4) = 1e-027
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -3
Query: 355 DVDGQRLAVPLLEALEHGVHELALADADE 441
DVDGQ LAVPLLEALEHGV EL LADA+E
Sbjct: 624 DVDGQGLAVPLLEALEHGVDELVLADAEE 538
Score = 57.9 bits (120), Expect(4) = 1e-027
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -3
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 303 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 169
Score = 54.2 bits (112), Expect(4) = 2e-021
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +3
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 63 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 164
Score = 47.3 bits (97), Expect(4) = 2e-021
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3 / +3
Query: 544 QPVVPAVPLRARGARLRVPDRREA 473
+ VVPAVPLR RGARLRVP RREA
Sbjct: 435 EQVVPAVPLRPRGARLRVPHRREA 506
Score = 40.0 bits (81), Expect(4) = 1e-027
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = +1 / -3
Query: 904 DVLLEVAQVHGLAQRHDVGGRHE 972
DVLL+VA+V GLAQRH V G HE
Sbjct: 69 DVLLKVAEVDGLAQRHHVCGGHE 1
Score = 37.7 bits (76), Expect(4) = 2e-021
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -3 / +3
Query: 418 ARGPHARVPQGVGRQAAAHQ 359
A PHARVPQGV R+A AHQ
Sbjct: 561 AHRPHARVPQGVERRAPAHQ 620
Score = 24.0 bits (46), Expect(4) = 2e-021
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +2
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 23 WRCARPSTSA 52
Score = 22.6 bits (43), Expect(4) = 1e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 456 VQRERPALLDQV 421
>gb|BI956808.1|BI956808 HVSMEn0005G21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005G21f, mRNA sequence
Length = 817
Score = 187 bits (402), Expect(2) = 4e-096
Identities = 82/108 (75%), Positives = 93/108 (86%)
Frame = -1 / +2
Query: 993 EAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFS 814
EA DILKLMSSTY+VALC A+DLRHLEENIK SVKN VTQV+KKVLTMN G+LSSARF
Sbjct: 26 EAEDILKLMSSTYMVALCHAIDLRHLEENIKTSVKNCVTQVSKKVLTMNGGGDLSSARFI 205
Query: 813 EKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
K LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 206 XKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 349
Score = 185 bits (399), Expect(2) = 4e-096
Identities = 73/111 (65%), Positives = 88/111 (79%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 338 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 517
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC K F+GI+ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 518 ELGCVYLTGEKLLSPGEECTKGFLGITHNKLIDPMLECLKEWNGEPLPINV 670
Score = 170 bits (365), Expect(2) = 1e-078
Identities = 77/108 (71%), Positives = 85/108 (78%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ F +KRALE SP F
Sbjct: 348 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFXMKRALERSPPPF 169
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIAS 994
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSF MS AS
Sbjct: 168 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFSMSSAS 25
Score = 144 bits (309), Expect(2) = 1e-078
Identities = 65/108 (60%), Positives = 68/108 (62%)
Frame = +2 / -2
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL W+MP L+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 660 GRGSPFHSLRHSSMGSMSLLWVMPRKPLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 481
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 480 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 337
Score = 57.9 bits (120), Expect(4) = 2e-026
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 349 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 215
Score = 50.1 bits (103), Expect(4) = 2e-026
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +1 / -1
Query: 358 VDGQRLAVPLLEALEHGVHELALADADE 441
VDGQ AVPLLEALEHGV+EL + DA E
Sbjct: 667 VDGQGFAVPLLEALEHGVNELVVGDAKE 584
Score = 43.7 bits (89), Expect(4) = 2e-026
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +1 / -1
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V G+AQRH V G HELQ V
Sbjct: 115 DVLLKVAEVDGMAQRHHVCGGHELQYV 35
Score = 22.6 bits (43), Expect(4) = 2e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 502 VQRERPALLDQV 467
>gb|BF261029.2|BF261029 HVSMEf0023J05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0023J05f, mRNA sequence
Length = 819
Score = 210 bits (454), Expect(5) = 3e-094
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 120 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 299
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 300 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 455
Score = 188 bits (404), Expect(5) = 3e-087
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 454 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 275
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 274 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 95
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 94 TSWLCCS 74
Score = 118 bits (253), Expect(5) = 3e-094
Identities = 51/108 (47%), Positives = 65/108 (60%)
Frame = -1 / +3
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 444 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 623
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLP 364
ELGCV+LTGE+L SP + F +++ P +P P
Sbjct: 624 ELGCVYLTGEKLLSPARNAPRSFSALARTSSSTPCSSASGSGTARPCP 767
Score = 89.5 bits (189), Expect(5) = 3e-087
Identities = 42/75 (56%), Positives = 43/75 (57%)
Frame = +2 / -3
Query: 464 GDLSLSPVRNTQPSSSRTKRYSGNDRLSAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXN 643
GD S SPVR TQPSSSRTKRYSGND LS IR GAVP N
Sbjct: 667 GDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSN 488
Query: 644 LVILENTEGSRSASP 688
L+ILENT S SASP
Sbjct: 487 LLILENTVASLSASP 443
Score = 80.8 bits (170), Expect(6) = 2e-042
Identities = 31/49 (63%), Positives = 38/49 (77%)
Frame = -1 / +2
Query: 465 PGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINIK*KNAKEKRREG 319
PGEEC KVF+GISQ KL+DPMLECL+EW+G+ LPI + A + REG
Sbjct: 665 PGEECTKVFLGISQNKLIDPMLECLREWNGEALPITXEDPPATGEEREG 811
Score = 61.6 bits (128), Expect(5) = 3e-087
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = +2 / -1
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPG 466
G P HSLRHSSMGS SL WLMP TL+HSSPG
Sbjct: 765 GRASPFHSLRHSSMGSMSLFWLMPRKTLVHSSPG 664
Score = 57.9 bits (120), Expect(6) = 4e-033
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 455 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 321
Score = 54.2 bits (112), Expect(6) = 2e-042
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +2
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 215 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 316
Score = 48.7 bits (100), Expect(6) = 4e-033
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 221 DVLLKVAEVDGLAQRHHVCGGHELQDV 141
Score = 48.3 bits (99), Expect(6) = 2e-042
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -3 / +2
Query: 544 QPVVPAVPLRARGARLRVPDRREA 473
+ VVPAVPLR+RGARLRVP RREA
Sbjct: 587 EQVVPAVPLRSRGARLRVPHRREA 658
Score = 43.7 bits (89), Expect(6) = 4e-033
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1 / -3
Query: 364 GQRLAVPLLEALEHGVHELALADADE 441
GQ LAVPL EALEHGV EL LA+A++
Sbjct: 766 GQGLAVPLPEALEHGVDELVLANAEK 689
Score = 40.5 bits (82), Expect(6) = 2e-042
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 119 QEDRRGCGHPEAHVLHIH 172
Score = 40.5 bits (82), Expect(5) = 3e-094
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -1 / +3
Query: 1125 IAMASYCSELQYXGTPITN 1069
IAMASYCSELQY P+TN
Sbjct: 3 IAMASYCSELQYLANPVTN 59
Score = 35.4 bits (71), Expect(5) = 3e-087
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ*EAMAI 1126
LV G+ YWSSEQ*EAMAI
Sbjct: 58 LVTGLARYWSSEQ*EAMAI 2
Score = 31.3 bits (62), Expect(6) = 4e-033
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 118 AETRPREFTSW 86
Score = 29.9 bits (59), Expect(5) = 3e-094
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 84 NQDVNSLGLVSARK 125
Score = 27.2 bits (53), Expect(6) = 4e-033
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1 / -2
Query: 1069 VGDGGAXVLELXAVGGHGD 1125
VG VLEL AVG HGD
Sbjct: 59 VGHRVGKVLELRAVGSHGD 3
Score = 24.4 bits (47), Expect(5) = 3e-087
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 82 CCSALWTWLVTG 47
Score = 24.0 bits (46), Expect(6) = 2e-042
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 175 WRCARPSTSA 204
Score = 22.6 bits (43), Expect(6) = 4e-033
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 608 VQRERPALLDQV 573
Score = 22.6 bits (43), Expect(5) = 3e-094
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 60 HVQSAEQH 83
Score = 22.6 bits (43), Expect(6) = 2e-042
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3 / +2
Query: 1126 DRHGXXXXXAPVXGHPHHQP 1067
DRHG APV P QP
Sbjct: 2 DRHGFLLL*APVPCQPGDQP 61
>gb|BQ765924.1|BQ765924 EBro03_SQ008_E16_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_E16 5', mRNA sequence
Length = 625
Score = 192 bits (414), Expect(2) = 9e-094
Identities = 76/111 (68%), Positives = 90/111 (81%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 269 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 448
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 449 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 601
Score = 172 bits (370), Expect(2) = 9e-094
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = -1 / +2
Query: 948 ALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFT 769
ALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSSARFSEK LI+AIDREAVF+
Sbjct: 2 ALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFS 181
Query: 768 YAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 182 YADDACSANYPLMQKLRAVLVDHALTAGPGEAE 280
Score = 154 bits (331), Expect(2) = 4e-075
Identities = 69/93 (74%), Positives = 75/93 (80%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 279 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 100
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSA 949
MVSTF T VT FFT+ LMFSSRWRRS AWHSA
Sbjct: 99 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSA 1
Score = 148 bits (317), Expect(2) = 4e-075
Identities = 67/108 (62%), Positives = 69/108 (63%)
Frame = +2 / -2
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 591 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 412
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 411 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 268
Score = 58.3 bits (121), Expect(4) = 2e-024
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -1
Query: 355 DVDGQRLAVPLLEALEHGVHELALADADE 441
DVDGQ LAVPLLEALEHGV EL LADA+E
Sbjct: 601 DVDGQGLAVPLLEALEHGVDELVLADAEE 515
Score = 57.9 bits (120), Expect(4) = 2e-024
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 280 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 146
Score = 28.6 bits (56), Expect(4) = 2e-024
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -1
Query: 904 DVLLEVAQVHGLAQR 948
DVLL+VA+V GLAQR
Sbjct: 46 DVLLKVAEVDGLAQR 2
Score = 22.6 bits (43), Expect(4) = 2e-024
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 433 VQRERPALLDQV 398
>gb|BM816193.1|BM816193 HC109D04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109D04_T3.ab1 similar to DNA-(apurinic or apyrimidinic
site) lyase,Histidine ammonia-lyase,Phenylalanine
ammonia-lyase,, mRNA sequence
Length = 812
Score = 156 bits (335), Expect(7) = 4e-093
Identities = 67/86 (77%), Positives = 77/86 (89%)
Frame = -1 / +2
Query: 927 LRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAEDAAS 748
LRHLEENIK SVKN VTQV+KKVLTMNP+G+LSSARFSEK LI+AIDREAVF+YA+DA S
Sbjct: 233 LRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACS 412
Query: 747 GSLPLMQKVRAVLVDHALSSGDAERE 670
+ PLMQK+RAVLVDHAL++G E E
Sbjct: 413 ANYPLMQKLRAVLVDHALTAGPGEAE 490
Score = 138 bits (297), Expect(5) = 6e-067
Identities = 63/86 (73%), Positives = 69/86 (80%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 489 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 310
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRR 928
MVSTF T VT FFT+ LMFSSRWRR
Sbjct: 309 MVSTFFDTCVTQFFTEVLMFSSRWRR 232
Score = 95.9 bits (203), Expect(7) = 4e-093
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = -1 / +3
Query: 546 DSRSFPLYRFVREELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLE 397
+SRSFPLYRFVREELGCV+LT E+L SPGEEC K +GIS KL+DPMLE
Sbjct: 618 ESRSFPLYRFVREELGCVYLTAEKLLSPGEECTKGLLGISPDKLIDPMLE 767
Score = 84.0 bits (177), Expect(5) = 6e-067
Identities = 38/50 (76%), Positives = 39/50 (78%)
Frame = +2 / -2
Query: 398 SSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRLS 547
SSMGS SL LMP L+HSSPGD S S VR TQPSSSRTKRYSGND LS
Sbjct: 766 SSMGSMSLSGLMPRRPLVHSSPGDSSFSAVRYTQPSSSRTKRYSGNDLLS 617
Score = 57.9 bits (120), Expect(6) = 5e-028
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 490 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 356
Score = 54.2 bits (112), Expect(5) = 2e-024
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +1
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 250 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 351
Score = 53.3 bits (110), Expect(7) = 4e-093
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQA 934
RKTAEA+DILKLMSSTY+VALCQA
Sbjct: 156 RKTAEAVDILKLMSSTYMVALCQA 227
Score = 51.5 bits (106), Expect(7) = 4e-093
Identities = 21/42 (50%), Positives = 27/42 (64%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPV 562
G+AE E +VFSKI +FEEELR+ LP+ GTAP+
Sbjct: 479 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPI 604
Score = 50.6 bits (104), Expect(5) = 6e-067
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +2 / -2
Query: 935 AWHSATM*VDDMSFRMSIASAVFLGRDEAQGVHVLVCAA 1051
AWHSATM V+DMSFRMS ASAVFL + +C +
Sbjct: 226 AWHSATMYVEDMSFRMSTASAVFLAETRPREFTSWLCCS 110
Score = 47.3 bits (97), Expect(5) = 2e-024
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3 / +2
Query: 544 QPVVPAVPLRARGARLRVPDRREA 473
+ VVPAVPLR RGARLRVP RREA
Sbjct: 620 EQVVPAVPLRPRGARLRVPHRREA 691
Score = 45.1 bits (92), Expect(7) = 4e-093
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 1134 GTEIAMASYCSELQYXGTPITN 1069
G EIAMASYCSELQY P+TN
Sbjct: 30 GPEIAMASYCSELQYLANPVTN 95
Score = 40.5 bits (82), Expect(5) = 2e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 155 QEDRRGCGHPEAHVLHIH 208
Score = 39.1 bits (79), Expect(5) = 6e-067
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +2 / -2
Query: 1070 LVMGVPXYWSSEQ*EAMAISVP 1135
LV G+ YWSSEQ*EAMAIS P
Sbjct: 94 LVTGLARYWSSEQ*EAMAISGP 29
Score = 36.3 bits (73), Expect(6) = 5e-028
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 960 WTT*ASGCRSPRRSSW 1007
W T*ASGC PRRSSW
Sbjct: 201 WRT*ASGCPQPRRSSW 154
Score = 35.0 bits (70), Expect(6) = 5e-028
Identities = 19/65 (29%), Positives = 25/65 (38%)
Frame = +2 / -3
Query: 494 TQPSSSRTKRYSGNDRLSAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGS 673
T+ + R + + S + GAVP NL+ILENT S
Sbjct: 672 TRSRAPRGRSGTAGTTCSPYQVGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVAS 493
Query: 674 RSASP 688
SASP
Sbjct: 492 LSASP 478
Score = 33.6 bits (67), Expect(6) = 5e-028
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 95 VGHRVGKVLELRAVGSHGDLGA 30
Score = 31.3 bits (62), Expect(6) = 5e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 154 AETRPREFTSW 122
Score = 29.9 bits (59), Expect(7) = 4e-093
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 120 NQDVNSLGLVSARK 161
Score = 27.6 bits (54), Expect(5) = 2e-024
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3 / +2
Query: 1138 KGHRDRHGXXXXXAPVXGHPHHQP 1067
+G RDRHG APV P QP
Sbjct: 26 RGPRDRHGFLLL*APVPCQPGDQP 97
Score = 25.8 bits (50), Expect(6) = 5e-028
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / -1
Query: 397 LEHGVHELALADADE 441
LEHGV EL ADA++
Sbjct: 767 LEHGVDELVWADAEK 723
Score = 24.4 bits (47), Expect(5) = 6e-067
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 118 CCSALWTWLVTG 83
Score = 22.6 bits (43), Expect(7) = 4e-093
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 96 HVQSAEQH 119
Score = 21.7 bits (41), Expect(5) = 2e-024
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -2 / +1
Query: 950 WRCARP 933
WRCARP
Sbjct: 211 WRCARP 228
>gb|BQ763878.1|BQ763878 EBro03_SQ005_L15_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_L15 5', mRNA sequence
Length = 615
Score = 192 bits (414), Expect(2) = 9e-091
Identities = 76/111 (68%), Positives = 90/111 (81%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 257 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 436
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 437 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 589
Score = 162 bits (348), Expect(2) = 9e-091
Identities = 69/89 (77%), Positives = 80/89 (89%)
Frame = -1 / +2
Query: 936 AVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAED 757
A+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSSARFSEK LI+AIDREAVF+YA+D
Sbjct: 2 AIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADD 181
Query: 756 AASGSLPLMQKVRAVLVDHALSSGDAERE 670
A S + PLMQK+RAVLVDHAL++G E E
Sbjct: 182 ACSANYPLMQKLRAVLVDHALTAGPGEAE 268
Score = 148 bits (317), Expect(2) = 2e-071
Identities = 67/108 (62%), Positives = 69/108 (63%)
Frame = +2 / -1
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 579 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 400
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 399 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 256
Score = 142 bits (304), Expect(2) = 2e-071
Identities = 65/89 (73%), Positives = 71/89 (79%)
Frame = +2 / -1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 267 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 88
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTA 937
MVSTF T VT FFT+ LMFSSRWRRS A
Sbjct: 87 MVSTFFDTCVTQFFTEVLMFSSRWRRSMA 1
Score = 58.3 bits (121), Expect(3) = 5e-021
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -3
Query: 355 DVDGQRLAVPLLEALEHGVHELALADADE 441
DVDGQ LAVPLLEALEHGV EL LADA+E
Sbjct: 589 DVDGQGLAVPLLEALEHGVDELVLADAEE 503
Score = 57.9 bits (120), Expect(3) = 5e-021
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -3
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 268 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 134
Score = 22.6 bits (43), Expect(3) = 5e-021
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 421 VQRERPALLDQV 386
>gb|BE214612.2|BE214612 HV_CEb0003P13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003P13f, mRNA sequence
Length = 728
Score = 210 bits (454), Expect(5) = 2e-090
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 120 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 299
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 300 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 455
Score = 188 bits (404), Expect(5) = 2e-074
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 454 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 275
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 274 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 95
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 94 TSWLCCS 74
Score = 116 bits (249), Expect(5) = 2e-090
Identities = 50/88 (56%), Positives = 60/88 (68%)
Frame = -1 / +1
Query: 669 PSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVREELGCVF 490
P + +FEEELR+ LP+ GT P+ N I +SRSFPLYRFVREELGCV+
Sbjct: 463 PRCSPRSNKFEEELRSALPREIEAARVAF*NGTEPIPNLIKESRSFPLYRFVREELGCVY 642
Query: 489 LTGERLKSPGEECNKVFVGISQGKLVDP 406
LT E+L SPGEE K F+GISQ KL+DP
Sbjct: 643 LTREKLVSPGEEWPKGFLGISQNKLIDP 726
Score = 94.1 bits (199), Expect(5) = 2e-074
Identities = 42/58 (72%), Positives = 43/58 (74%)
Frame = +2 / -1
Query: 404 MGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRLSAIRFATGAVP 577
MGS SL WLMP L HSSPGD S S VR TQPSSSRTKRYSGND LS IR G+VP
Sbjct: 728 MGSMSLFWLMPRKPLGHSSPGDTSFSRVRYTQPSSSRTKRYSGNDLLSLIRLGMGSVP 555
Score = 57.9 bits (120), Expect(4) = 2e-022
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 455 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 321
Score = 54.2 bits (112), Expect(4) = 7e-021
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +2
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 215 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 316
Score = 48.7 bits (100), Expect(4) = 2e-022
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -1
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 221 DVLLKVAEVDGLAQRHHVCGGHELQDV 141
Score = 42.3 bits (86), Expect(4) = 7e-021
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -3 / +3
Query: 544 QPVVPAVPLRARGARLRVPDRRE 476
+ VVPAVPLR RGARLRVP RE
Sbjct: 588 EQVVPAVPLRPRGARLRVPHPRE 656
Score = 40.5 bits (82), Expect(4) = 7e-021
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 119 QEDRRGCGHPEAHVLHIH 172
Score = 31.3 bits (62), Expect(4) = 2e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 118 AETRPREFTSW 86
Score = 29.9 bits (59), Expect(5) = 2e-090
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 84 NQDVNSLGLVSARK 125
Score = 29.5 bits (58), Expect(5) = 2e-090
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -1 / +3
Query: 1125 IAMASYCSELQYXGTPITN 1069
I A+ CSELQY P+TN
Sbjct: 3 IPRAAGCSELQYLANPVTN 59
Score = 25.8 bits (50), Expect(5) = 2e-074
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2 / -2
Query: 1070 LVMGVPXYWSSEQ*EAMAI 1126
LV G+ YWSSEQ A I
Sbjct: 58 LVTGLARYWSSEQPAARGI 2
Score = 24.4 bits (47), Expect(5) = 2e-074
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 82 CCSALWTWLVTG 47
Score = 24.0 bits (46), Expect(4) = 7e-021
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 175 WRCARPSTSA 204
Score = 23.1 bits (44), Expect(5) = 2e-074
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 647 VILENTEGSRSASP 688
+ILENT S SASP
Sbjct: 484 LILENTVASLSASP 443
Score = 22.6 bits (43), Expect(4) = 2e-022
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 609 VQRERPALLDQV 574
Score = 22.6 bits (43), Expect(5) = 2e-090
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 60 HVQSAEQH 83
>gb|AV926975.1|AV926975 AV926975 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd26e14 5', mRNA sequence
Length = 625
Score = 210 bits (454), Expect(5) = 4e-084
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 129 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 308
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 309 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 464
Score = 188 bits (404), Expect(4) = 2e-067
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 463 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 284
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 283 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 104
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 103 TSWLCCS 83
Score = 77.1 bits (162), Expect(5) = 4e-084
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = -1 / +3
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRF 517
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRF
Sbjct: 453 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRF 623
Score = 59.3 bits (123), Expect(4) = 2e-067
Identities = 28/58 (48%), Positives = 29/58 (50%)
Frame = +2 / -1
Query: 515 TKRYSGNDRLSAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
TKRYSGND LS IR GAVP NL+ILENT S SASP
Sbjct: 625 TKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 452
Score = 57.9 bits (120), Expect(5) = 3e-027
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -3
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 464 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 330
Score = 48.7 bits (100), Expect(5) = 3e-027
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 230 DVLLKVAEVDGLAQRHHVCGGHELQDV 150
Score = 47.8 bits (98), Expect(5) = 4e-084
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -1 / +3
Query: 1134 GTEIAMASYCSELQYXGTPITN 1069
GTEIAMASYCSELQY P+TN
Sbjct: 3 GTEIAMASYCSELQYLANPVTN 68
Score = 42.3 bits (86), Expect(4) = 2e-067
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2 / -1
Query: 1070 LVMGVPXYWSSEQ*EAMAISVP 1135
LV G+ YWSSEQ*EAMAISVP
Sbjct: 67 LVTGLARYWSSEQ*EAMAISVP 2
Score = 33.6 bits (67), Expect(5) = 3e-027
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 68 VGHRVGKVLELRAVGSHGDLGA 3
Score = 31.3 bits (62), Expect(5) = 3e-027
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 127 AETRPREFTSW 95
Score = 29.9 bits (59), Expect(5) = 4e-084
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 93 NQDVNSLGLVSARK 134
Score = 24.4 bits (47), Expect(4) = 2e-067
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 91 CCSALWTWLVTG 56
Score = 22.6 bits (43), Expect(5) = 4e-084
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 69 HVQSAEQH 92
Score = 22.6 bits (43), Expect(5) = 3e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 617 VQRERPALLDQV 582
>gb|BI957512.1|BI957512 HVSMEn0009P04f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0009P04f,
mRNA sequence
Length = 639
Score = 210 bits (454), Expect(5) = 6e-084
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 138 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 317
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 318 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 473
Score = 188 bits (404), Expect(4) = 4e-067
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 472 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 293
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 292 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 113
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 112 TSWLCCS 92
Score = 76.2 bits (160), Expect(5) = 6e-084
Identities = 32/59 (54%), Positives = 40/59 (67%)
Frame = -1 / +3
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVR 511
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +S+S PLYRFVR
Sbjct: 462 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESQSVPLYRFVR 638
Score = 58.3 bits (121), Expect(4) = 4e-067
Identities = 28/59 (47%), Positives = 29/59 (49%)
Frame = +2 / -3
Query: 512 RTKRYSGNDRLSAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
RTKRYSG D LS IR GAVP NL+ILENT S SASP
Sbjct: 637 RTKRYSGTDWLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 461
Score = 57.9 bits (120), Expect(4) = 1e-025
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 473 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 339
Score = 48.7 bits (100), Expect(4) = 1e-025
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 239 DVLLKVAEVDGLAQRHHVCGGHELQDV 159
Score = 48.3 bits (99), Expect(5) = 6e-084
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 1137 RGTEIAMASYCSELQYXGTPITN 1069
+GTEIAMASYCSELQY P+TN
Sbjct: 9 QGTEIAMASYCSELQYLANPVTN 77
Score = 42.3 bits (86), Expect(4) = 4e-067
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ*EAMAISVP 1135
LV G+ YWSSEQ*EAMAISVP
Sbjct: 76 LVTGLARYWSSEQ*EAMAISVP 11
Score = 33.6 bits (67), Expect(4) = 1e-025
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -2
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 77 VGHRVGKVLELRAVGSHGDLGA 12
Score = 31.3 bits (62), Expect(4) = 1e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 136 AETRPREFTSW 104
Score = 29.9 bits (59), Expect(5) = 6e-084
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 102 NQDVNSLGLVSARK 143
Score = 24.4 bits (47), Expect(4) = 4e-067
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 100 CCSALWTWLVTG 65
Score = 22.6 bits (43), Expect(5) = 6e-084
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 78 HVQSAEQH 101
>gb|BQ768801.1|BQ768801 EBro08_SQ012_P15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_P15 5', mRNA sequence
Length = 679
Score = 178 bits (383), Expect(2) = 2e-083
Identities = 75/112 (66%), Positives = 94/112 (83%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEAIDILKLMSST++VALCQA+DLRHLEEN+K +VK+ V VA+K L+ N +G L S
Sbjct: 13 RKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVKTVARKTLSTNSNGHLHS 192
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARF EK+L+ IDREAVF YA+D S + PLMQK+RAVLV+HAL++G+AE +
Sbjct: 193 ARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALANGEAEHD 348
Score = 152 bits (326), Expect(2) = 2e-083
Identities = 61/104 (58%), Positives = 79/104 (75%)
Frame = -1 / +1
Query: 672 EPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVREELGCV 493
E SVF+K+ FE+ELRAVLP+ GTA NRI++ RS+PLYRFVR+ELG
Sbjct: 352 ETSVFAKLATFEQELRAVLPKEVEAARSAVENGTAAQQNRISECRSYPLYRFVRKELGTE 531
Query: 492 FLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPI 361
+LTGE+ +SPGEE +KVFV ++QGK +D +LECLKEW+G+PLPI
Sbjct: 532 YLTGEKTRSPGEEVDKVFVAMNQGKHIDALLECLKEWNGEPLPI 663
Score = 123 bits (264), Expect(3) = 7e-033
Identities = 68/112 (60%), Positives = 75/112 (66%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S SASPL +A ST TAR FC+SG L L SSA NTASRS+ SFS KRAL P
Sbjct: 347 SCSASPLAKACSTRTARIFCMSG*LALQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLL 168
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFL 1006
++S FLAT T T L FSSR RRS A H+AT V+DMSF MSIASAVFL
Sbjct: 167 VLSVFLATVFTQLLTAFLTFSSR*RRSIA*HNATKNVEDMSFNMSIASAVFL 12
Score = 102 bits (217), Expect(2) = 4e-023
Identities = 52/117 (44%), Positives = 57/117 (48%)
Frame = +2 / -3
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HS RHS S LPW M TNTL SSPGD SPV+ + PSS RT R SG DR
Sbjct: 659 GRGSPFHSFRHSRSASMCLPWFMATNTLSTSSPGDRVFSPVKYSVPSSLRTNR*SGYDRH 480
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASPLLRAWSTST 715
S IRF AVP N+ L NT+ S S S A + ST
Sbjct: 479 SEIRFCCAAVPFSTALLAASTSFGSTARSSCSNVASLANTDVSTSCSASPLAKACST 309
Score = 32.2 bits (64), Expect(3) = 7e-033
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1 / -2
Query: 361 DGQRLAVPLLEALEHGVHELALADADEH 444
D Q L +PLL+AL+ V LAL +EH
Sbjct: 663 DRQGLTIPLLQALKERVDVLALVHGNEH 580
Score = 29.0 bits (57), Expect(2) = 4e-023
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDVD 987
D+LL+V +V L QR+ HELQ V+
Sbjct: 114 DILLKVTEVDSLTQRNQECRGHELQYVN 31
Score = 27.6 bits (54), Expect(3) = 7e-033
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 616 QHRAELLLEPGDLGEH 663
QH ELLLE G LG+H
Sbjct: 408 QHCTELLLERGKLGKH 361
>gb|BG365997.1|BG365997 HVSMEi0004M09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004M09f, mRNA sequence
Length = 939
Score = 185 bits (399), Expect(2) = 2e-083
Identities = 73/111 (65%), Positives = 88/111 (79%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+A+ E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYR VRE
Sbjct: 256 GEADSEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRLVRE 435
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KV +GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 436 ELGCVYLTGEKLLSPGEECTKVLLGISQNKLIDPMLECLKEWNGEPLPINV 588
Score = 149 bits (319), Expect(2) = 2e-068
Identities = 67/108 (62%), Positives = 70/108 (64%)
Frame = +2 / -2
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL WLMP+ TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 578 GRGSPFHSLRHSSMGSMSLFWLMPSKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 399
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 398 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 255
Score = 144 bits (309), Expect(2) = 2e-083
Identities = 63/89 (70%), Positives = 73/89 (82%)
Frame = -1 / +1
Query: 936 AVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAED 757
AVDLRHLEENI VKN VT V KKVLTMNP+G+LS AR EK LI+AIDREAVF+YA+D
Sbjct: 1 AVDLRHLEENIMTYVKNCVTHVLKKVLTMNPTGDLSIARLIEKSLITAIDREAVFSYADD 180
Query: 756 AASGSLPLMQKVRAVLVDHALSSGDAERE 670
A S + PLMQK+RAVLVDHAL++G E +
Sbjct: 181 ACSANYPLMQKLRAVLVDHALTAGPGEAD 267
Score = 131 bits (281), Expect(2) = 2e-068
Identities = 61/88 (69%), Positives = 69/88 (78%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FS+KRA+E SP GF
Sbjct: 266 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSIKRAMERSPVGF 87
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRST 934
MVSTF T VT FFT +MFSSR RRST
Sbjct: 86 MVSTFFNTCVTQFFT*VMMFSSRCRRST 3
Score = 57.0 bits (118), Expect(4) = 2e-025
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / -1
Query: 685 AAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 252 AGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 133
Score = 57.0 bits (118), Expect(4) = 2e-025
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1 / -1
Query: 355 DVDGQRLAVPLLEALEHGVHELALADADE 441
DVDGQ LAVPLLEALEHGV EL LADA++
Sbjct: 588 DVDGQGLAVPLLEALEHGVDELVLADAEQ 502
Score = 34.5 bits (69), Expect(4) = 2e-025
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1 / -1
Query: 616 QHRAELLLEPGDLGEHGGLPLRVAAAEG 699
Q R +LLLE DLGEH GL + +A A G
Sbjct: 327 QGRPQLLLELVDLGEHRGLAIGLAGAGG 244
Score = 22.6 bits (43), Expect(4) = 2e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -1
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 420 VQRERPALLDQV 385
>gb|AL505417.1|AL505417 AL505417 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08G13V 5', mRNA sequence
Length = 689
Score = 210 bits (454), Expect(5) = 2e-079
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +2
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 107 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 286
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 287 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 442
Score = 188 bits (404), Expect(4) = 3e-062
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 441 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 262
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 261 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 82
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 81 TSWLCCS 61
Score = 78.5 bits (165), Expect(5) = 2e-079
Identities = 34/58 (58%), Positives = 41/58 (70%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFV 514
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFV
Sbjct: 431 GEAESEATVFSKINKFEEELRSALPREIEAXRVAFENGTAPIPNLIKESRSFPLYRFV 604
Score = 58.8 bits (122), Expect(4) = 3e-062
Identities = 29/58 (50%), Positives = 30/58 (51%)
Frame = +2 / -3
Query: 515 TKRYSGNDRLSAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
TKRYSGND LS IR GAVP NL+ILENT S SASP
Sbjct: 603 TKRYSGNDLLSLIRLGMGAVPFSKATRXASISRGRADRSSSSNLLILENTVASLSASP 430
Score = 57.9 bits (120), Expect(4) = 2e-022
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 442 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 308
Score = 48.7 bits (100), Expect(4) = 2e-022
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 208 DVLLKVAEVDGLAQRHHVCGGHELQDV 128
Score = 31.3 bits (62), Expect(4) = 2e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 105 AETRPREFTSW 73
Score = 30.9 bits (61), Expect(5) = 2e-079
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 1110 YCSELQYXGTPITN 1069
YCSELQY P+TN
Sbjct: 5 YCSELQYLANPVTN 46
Score = 29.9 bits (59), Expect(5) = 2e-079
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 71 NQDVNSLGLVSARK 112
Score = 25.4 bits (49), Expect(4) = 3e-062
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ* 1111
LV G+ YWSSEQ*
Sbjct: 45 LVTGLARYWSSEQ* 4
Score = 24.4 bits (47), Expect(4) = 3e-062
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 69 CCSALWTWLVTG 34
Score = 22.6 bits (43), Expect(4) = 2e-022
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 595 VQRERPALLDQV 560
Score = 22.6 bits (43), Expect(5) = 2e-079
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 47 HVQSAEQH 70
>gb|BI957553.1|BI957553 HVSMEn0010B19f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0010B19f,
mRNA sequence
Length = 633
Score = 206 bits (444), Expect(4) = 2e-079
Identities = 88/112 (78%), Positives = 101/112 (90%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLM TY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 136 RKTAEAVDILKLMCCTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 315
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 316 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 471
Score = 183 bits (394), Expect(4) = 2e-065
Identities = 84/112 (75%), Positives = 90/112 (80%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 470 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 291
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFL 1006
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V MSFRMS ASAVFL
Sbjct: 290 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVQHMSFRMSTASAVFL 135
Score = 79.0 bits (166), Expect(4) = 2e-079
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFV 514
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFV
Sbjct: 460 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFV 633
Score = 59.3 bits (123), Expect(4) = 2e-065
Identities = 28/58 (48%), Positives = 29/58 (50%)
Frame = +2 / -2
Query: 515 TKRYSGNDRLSAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
TKRYSGND LS IR GAVP NL+ILENT S SASP
Sbjct: 632 TKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 459
Score = 39.1 bits (79), Expect(4) = 2e-079
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / +1
Query: 1137 RGTEIAMASYCSELQYXGTPITN 1069
+GTE A SYCSELQY P+TN
Sbjct: 7 QGTEGAGGSYCSELQYLANPVTN 75
Score = 33.6 bits (67), Expect(4) = 2e-065
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = +2 / -2
Query: 1070 LVMGVPXYWSSEQ*EAMAISVP 1135
LV G+ YWSSEQ*E A SVP
Sbjct: 74 LVTGLARYWSSEQ*EPPAPSVP 9
Score = 31.3 bits (62), Expect(4) = 2e-065
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 134 AETRPREFTSW 102
Score = 29.9 bits (59), Expect(4) = 2e-079
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 100 NQDVNSLGLVSARK 141
>gb|BI960030.1|BI960030 HVSMEn0022P01f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0022P01f,
mRNA sequence
Length = 628
Score = 210 bits (454), Expect(5) = 4e-079
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 166 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 345
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 346 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 501
Score = 188 bits (404), Expect(4) = 4e-062
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 500 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 321
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 320 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 141
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 140 TSWLCCS 120
Score = 57.9 bits (120), Expect(5) = 1e-028
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 501 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 367
Score = 54.7 bits (113), Expect(5) = 4e-079
Identities = 23/46 (50%), Positives = 29/46 (63%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRI 550
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I
Sbjct: 490 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLI 627
Score = 53.3 bits (110), Expect(5) = 4e-079
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = -1 / +1
Query: 1173 AGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
AG P+ +GTEIAMASYCSELQY P+TN
Sbjct: 1 AGSRNPSLDYGFKGTEIAMASYCSELQYLANPVTN 105
Score = 48.7 bits (100), Expect(5) = 1e-028
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 267 DVLLKVAEVDGLAQRHHVCGGHELQDV 187
Score = 46.9 bits (96), Expect(4) = 4e-062
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXP 1171
LV G+ YWSSEQ*EAMAISVPL+ + G+ P
Sbjct: 104 LVTGLARYWSSEQ*EAMAISVPLKP*SKLGLRLP 3
Score = 36.8 bits (74), Expect(4) = 4e-062
Identities = 18/46 (39%), Positives = 19/46 (41%)
Frame = +2 / -3
Query: 551 IRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
IR GAVP NL+ILENT S SASP
Sbjct: 626 IRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 489
Score = 33.6 bits (67), Expect(5) = 1e-028
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -2
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 105 VGHRVGKVLELRAVGSHGDLGA 40
Score = 31.3 bits (62), Expect(5) = 1e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 164 AETRPREFTSW 132
Score = 29.9 bits (59), Expect(5) = 4e-079
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 130 NQDVNSLGLVSARK 171
Score = 27.6 bits (54), Expect(5) = 1e-028
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 1135 P*SRSPGWGC 1164
P*SRSP WGC
Sbjct: 40 P*SRSPSWGC 11
Score = 24.4 bits (47), Expect(4) = 4e-062
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 128 CCSALWTWLVTG 93
Score = 22.6 bits (43), Expect(5) = 4e-079
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 106 HVQSAEQH 129
>gb|BI959619.1|BI959619 HVSMEn0020H03f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0020H03f,
mRNA sequence
Length = 616
Score = 210 bits (454), Expect(6) = 1e-077
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 157 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 336
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 337 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 492
Score = 188 bits (404), Expect(5) = 3e-061
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 491 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 312
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 311 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 132
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 131 TSWLCCS 111
Score = 57.9 bits (120), Expect(4) = 2e-025
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 492 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 358
Score = 48.7 bits (100), Expect(4) = 2e-025
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 258 DVLLKVAEVDGLAQRHHVCGGHELQDV 178
Score = 48.3 bits (99), Expect(6) = 1e-077
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 1137 RGTEIAMASYCSELQYXGTPITN 1069
+GTEIAMASYCSELQY P+TN
Sbjct: 28 QGTEIAMASYCSELQYLANPVTN 96
Score = 45.5 bits (93), Expect(6) = 1e-077
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPV 562
G+AE E +VFSKI +FEEELR+ LP+ T P+
Sbjct: 481 GEAESEATVFSKINKFEEELRSALPREIEAXRVALENRTGPI 606
Score = 42.3 bits (86), Expect(5) = 3e-061
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ*EAMAISVP 1135
LV G+ YWSSEQ*EAMAISVP
Sbjct: 95 LVTGLARYWSSEQ*EAMAISVP 30
Score = 33.6 bits (67), Expect(4) = 2e-025
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -2
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 96 VGHRVGKVLELRAVGSHGDLGA 31
Score = 31.3 bits (62), Expect(4) = 2e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 155 AETRPREFTSW 123
Score = 29.9 bits (59), Expect(6) = 1e-077
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 121 NQDVNSLGLVSARK 162
Score = 28.6 bits (56), Expect(5) = 3e-061
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -3
Query: 1126 LGAP*SRSPGWGC 1164
+ P*SRSP WGC
Sbjct: 41 ISVP*SRSPSWGC 3
Score = 27.6 bits (54), Expect(5) = 3e-061
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 641 NLVILENTEGSRSASP 688
NL+ILENT S SASP
Sbjct: 527 NLLILENTVASLSASP 480
Score = 27.2 bits (53), Expect(6) = 1e-077
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 1165 RNPSLDYGFKGHR 1127
RNPS DYGFK R
Sbjct: 2 RNPSWDYGFKAPR 40
Score = 24.4 bits (47), Expect(5) = 3e-061
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 119 CCSALWTWLVTG 84
Score = 22.6 bits (43), Expect(6) = 1e-077
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 97 HVQSAEQH 120
>gb|BI959468.1|BI959468 HVSMEn0019M15f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019M15f,
mRNA sequence
Length = 653
Score = 209 bits (450), Expect(5) = 1e-077
Identities = 89/110 (80%), Positives = 102/110 (92%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 247 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 426
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAE 676
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E
Sbjct: 427 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGE 576
Score = 186 bits (401), Expect(4) = 2e-062
Identities = 85/125 (68%), Positives = 95/125 (76%)
Frame = +2 / -1
Query: 677 SASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGFMV 856
S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GFMV
Sbjct: 575 SPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMV 396
Query: 857 STFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGVHV 1036
STF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 395 STFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREFTS 216
Query: 1037 LVCAA 1051
+C +
Sbjct: 215 WLCCS 201
Score = 72.1 bits (151), Expect(5) = 1e-077
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1 / +1
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGLTSNLAG P+ +GTEIAMASYCSELQY P+TN
Sbjct: 58 NNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPVTN 186
Score = 62.0 bits (129), Expect(4) = 2e-062
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2 / -1
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+ YWSSEQ*EAMAISVPL+ + G+ PAR EVSPL
Sbjct: 185 LVTGLARYWSSEQ*EAMAISVPLKP*SKLGLRLPARLEVSPL 60
Score = 57.0 bits (118), Expect(5) = 2e-028
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / -3
Query: 685 AAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 567 AGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 448
Score = 54.2 bits (112), Expect(4) = 9e-025
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +3
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 342 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 443
Score = 50.1 bits (103), Expect(4) = 9e-025
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = -3 / +3
Query: 1195 QRAHLKPGRXRNPSLDYGFKGHRDRHGXXXXXAPVXGHPHHQP 1067
QRA L+PGR P L +GHRDRHG APV P QP
Sbjct: 60 QRADLQPGRQPQPQLGLRLQGHRDRHGFLLL*APVPCQPGDQP 188
Score = 48.7 bits (100), Expect(5) = 2e-028
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 348 DVLLKVAEVDGLAQRHHVCGGHELQDV 268
Score = 40.5 bits (82), Expect(4) = 9e-025
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +3
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 246 QEDRRGCGHPEAHVLHIH 299
Score = 33.6 bits (67), Expect(5) = 2e-028
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 186 VGHRVGKVLELRAVGSHGDLGA 121
Score = 32.7 bits (65), Expect(5) = 1e-077
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVL 616
G+A + +VFSKI +F EELR+ L
Sbjct: 571 GEAXKRATVFSKIKQFXEELRSAL 642
Score = 31.3 bits (62), Expect(5) = 2e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 245 AETRPREFTSW 213
Score = 29.9 bits (59), Expect(5) = 1e-077
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 211 NQDVNSLGLVSARK 252
Score = 27.6 bits (54), Expect(5) = 2e-028
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 1135 P*SRSPGWGC 1164
P*SRSP WGC
Sbjct: 121 P*SRSPSWGC 92
Score = 24.4 bits (47), Expect(4) = 2e-062
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 209 CCSALWTWLVTG 174
Score = 24.4 bits (47), Expect(4) = 2e-062
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1 / -3
Query: 628 ELLLEPGDLGEHGGLPLRVAAAEG 699
+LL E DLGEH G +A A G
Sbjct: 630 QLLXELFDLGEHXGSLXGLAGAGG 559
Score = 24.0 bits (46), Expect(4) = 9e-025
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +2
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 302 WRCARPSTSA 331
Score = 22.6 bits (43), Expect(5) = 1e-077
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 187 HVQSAEQH 210
>gb|BF628845.2|BF628845 HVSMEb0008N10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0008N10f, mRNA sequence
Length = 758
Score = 162 bits (348), Expect(2) = 1e-077
Identities = 69/89 (77%), Positives = 80/89 (89%)
Frame = -1 / +1
Query: 936 AVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAED 757
A+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSSARFSEK LI+AIDREAVF+YA+D
Sbjct: 1 AIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADD 180
Query: 756 AASGSLPLMQKVRAVLVDHALSSGDAERE 670
A S + PLMQK+RAVLVDHAL++G E E
Sbjct: 181 ACSANYPLMQKLRAVLVDHALTAGPGEAE 267
Score = 148 bits (318), Expect(2) = 1e-077
Identities = 63/110 (57%), Positives = 76/110 (69%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPL R VR
Sbjct: 256 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLCRLVRR 435
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPIN 358
ELGCV LTG++L SPG EC K + ISQ KL+ PML CL WDG+PL +N
Sbjct: 436 ELGCVCLTGDKLLSPGRECTKE*LEISQNKLMGPMLGCLGGWDGEPLAMN 585
Score = 140 bits (301), Expect(2) = 1e-062
Identities = 64/87 (73%), Positives = 70/87 (80%)
Frame = +2 / -1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 266 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 87
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRS 931
MVSTF T VT FFT+ LMFSSRWRRS
Sbjct: 86 MVSTFFDTCVTQFFTEVLMFSSRWRRS 6
Score = 120 bits (256), Expect(2) = 1e-062
Identities = 56/106 (52%), Positives = 63/106 (59%)
Frame = +2 / -1
Query: 371 GLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRLSA 550
G PSH RH SMG SL WL+ + +L+HS PG SLSPVR+T PSS RTKR+SGND LS
Sbjct: 572 GSPSHPPRHPSMGPMSLFWLISSYSLVHSRPGLSSLSPVRHTHPSSLRTKRHSGNDLLSL 393
Query: 551 IRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
IR GAVP NL+ILENT S SASP
Sbjct: 392 IRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 255
>gb|BQ469057.1|BQ469057 HM03D09r HM Hordeum vulgare subsp. vulgare cDNA clone HM03D09
5-PRIME, mRNA sequence
Length = 535
Score = 163 bits (350), Expect(2) = 3e-077
Identities = 66/98 (67%), Positives = 77/98 (78%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 241 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 420
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLEC 394
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLEC
Sbjct: 421 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLEC 534
Score = 146 bits (314), Expect(2) = 3e-077
Identities = 63/82 (76%), Positives = 73/82 (89%)
Frame = -1 / +1
Query: 915 EENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAEDAASGSLP 736
EENIK SVKN VTQV+KKVLTMNP+G+LSSARFSEK LI+AIDREAVF+YA+DA S + P
Sbjct: 7 EENIKTSVKNCVTQVSKKVLTMNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYP 186
Query: 735 LMQKVRAVLVDHALSSGDAERE 670
LMQK+RAVLVDHAL++G E E
Sbjct: 187 LMQKLRAVLVDHALTAGPGEAE 252
Score = 132 bits (282), Expect(2) = 4e-062
Identities = 60/98 (61%), Positives = 62/98 (63%)
Frame = +2 / -3
Query: 395 HSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRLSAIRFATGAV 574
HSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND LS IR GAV
Sbjct: 533 HSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAV 354
Query: 575 PXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
P NL+ILENT S SASP
Sbjct: 353 PFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 240
Score = 127 bits (271), Expect(2) = 4e-062
Identities = 59/82 (71%), Positives = 65/82 (79%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 251 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 72
Query: 851 MVSTFLATWVTVFFTDALMFSS 916
MVSTF T VT FFT+ LMFSS
Sbjct: 71 MVSTFFDTCVTQFFTEVLMFSS 6
>gb|BI958535.1|BI958535 HVSMEn0015H19f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0015H19f,
mRNA sequence
Length = 643
Score = 209 bits (451), Expect(5) = 5e-076
Identities = 89/112 (79%), Positives = 103/112 (91%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQ++KKVLTMNP+G+LSS
Sbjct: 268 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQLSKKVLTMNPTGDLSS 447
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 448 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 603
Score = 185 bits (399), Expect(4) = 8e-063
Identities = 85/127 (66%), Positives = 95/127 (74%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 602 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 423
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 422 MVSTFFDNCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 243
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 242 TSWLCCS 222
Score = 69.8 bits (146), Expect(5) = 5e-076
Identities = 28/43 (65%), Positives = 31/43 (72%)
Frame = -1 / +1
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGLTSNLAG P+ +GTEIAMA YCSELQY P+TN
Sbjct: 79 NNGLTSNLAGSRNPSLDYGFKGTEIAMACYCSELQYLANPVTN 207
Score = 60.6 bits (126), Expect(4) = 8e-063
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+ YWSSEQ*+AMAISVPL+ + G+ PAR EVSPL
Sbjct: 206 LVTGLARYWSSEQ*QAMAISVPLKP*SKLGLRLPARLEVSPL 81
Score = 57.9 bits (120), Expect(5) = 7e-028
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 603 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 469
Score = 50.1 bits (103), Expect(4) = 1e-023
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = -3 / +3
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD +EGADHEP R LQR LQRE
Sbjct: 363 EHQDLREELRDAVVEEGADHEPYRRPLQRALQRE 464
Score = 50.1 bits (103), Expect(4) = 1e-023
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = -3 / +3
Query: 1195 QRAHLKPGRXRNPSLDYGFKGHRDRHGXXXXXAPVXGHPHHQP 1067
QRA L+PGR P L +GHRDRHG APV P QP
Sbjct: 81 QRADLQPGRQPQPQLGLRLQGHRDRHGLLLL*APVPCQPGDQP 209
Score = 48.7 bits (100), Expect(5) = 7e-028
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 369 DVLLKVAEVDGLAQRHHVCGGHELQDV 289
Score = 40.5 bits (82), Expect(4) = 1e-023
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +3
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 267 QEDRRGCGHPEAHVLHIH 320
Score = 31.3 bits (62), Expect(5) = 7e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 266 AETRPREFTSW 234
Score = 30.9 bits (61), Expect(5) = 7e-028
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +1 / -2
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AV HGDLGA
Sbjct: 207 VGHRVGKVLELRAVASHGDLGA 142
Score = 29.9 bits (59), Expect(5) = 5e-076
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 232 NQDVNSLGLVSARK 273
Score = 29.0 bits (57), Expect(5) = 5e-076
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFE 637
G+AE E +VFSKI +FE
Sbjct: 592 GEAESEATVFSKINKFE 642
Score = 27.6 bits (54), Expect(5) = 7e-028
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 1135 P*SRSPGWGC 1164
P*SRSP WGC
Sbjct: 142 P*SRSPSWGC 113
Score = 27.6 bits (54), Expect(4) = 8e-063
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 641 NLVILENTEGSRSASP 688
NL+ILENT S SASP
Sbjct: 638 NLLILENTVASLSASP 591
Score = 24.4 bits (47), Expect(4) = 8e-063
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 230 CCSALWTWLVTG 195
Score = 24.0 bits (46), Expect(4) = 1e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +2
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 323 WRCARPSTSA 352
Score = 22.6 bits (43), Expect(5) = 5e-076
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 208 HVQSAEQH 231
>gb|AV912724.1|AV912724 AV912724 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10a01 5', mRNA sequence
Length = 618
Score = 210 bits (454), Expect(4) = 4e-075
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 52 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 231
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 232 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 387
Score = 188 bits (404), Expect(4) = 6e-063
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 386 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 207
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 206 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 27
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 26 TSWLCCS 6
Score = 61.6 bits (128), Expect(4) = 4e-075
Identities = 27/57 (47%), Positives = 32/57 (56%)
Frame = -1 / +2
Query: 669 PSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVREELG 499
P + T LR+ LP+ GTAP+ N I +SRSFPLYRFVREELG
Sbjct: 395 PRCSPRSTSSRRSLRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVREELG 565
Score = 57.9 bits (120), Expect(4) = 2e-022
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 387 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 253
Score = 54.2 bits (112), Expect(5) = 2e-023
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +3
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 147 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 248
Score = 50.1 bits (103), Expect(4) = 6e-063
Identities = 21/27 (77%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 497 QPSSSRTKRYSGNDRLSAIRFATGAVP 577
+PSSSRTKRYSGND LS IR GAVP
Sbjct: 567 KPSSSRTKRYSGNDLLSLIRLGMGAVP 487
Score = 48.7 bits (100), Expect(4) = 2e-022
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -1
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 153 DVLLKVAEVDGLAQRHHVCGGHELQDV 73
Score = 40.5 bits (82), Expect(5) = 2e-023
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +3
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 51 QEDRRGCGHPEAHVLHIH 104
Score = 37.7 bits (76), Expect(4) = 4e-075
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1 / +3
Query: 498 CVFLTGERLKSPGEEC 451
CV+LTGE+L SPGEEC
Sbjct: 567 CVYLTGEKLLSPGEEC 614
Score = 35.4 bits (71), Expect(5) = 2e-023
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEEL 628
G+AE E +VFSKI +FEEEL
Sbjct: 376 GEAESEATVFSKINKFEEEL 435
Score = 33.1 bits (66), Expect(4) = 6e-063
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 449 LHSSPGDLSLSPVRNTQ 499
+HSSPGD S SPVR TQ
Sbjct: 616 VHSSPGDSSFSPVRYTQ 566
Score = 31.8 bits (63), Expect(5) = 2e-023
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -3 / +1
Query: 544 QPVVPAVPLRARGARL 497
+ VVPAVPLR RGARL
Sbjct: 520 EQVVPAVPLRPRGARL 567
Score = 31.3 bits (62), Expect(4) = 2e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 50 AETRPREFTSW 18
Score = 29.9 bits (59), Expect(4) = 4e-075
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 16 NQDVNSLGLVSARK 57
Score = 27.6 bits (54), Expect(4) = 6e-063
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 641 NLVILENTEGSRSASP 688
NL+ILENT S SASP
Sbjct: 422 NLLILENTVASLSASP 375
Score = 24.0 bits (46), Expect(5) = 2e-023
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +2
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 107 WRCARPSTSA 136
Score = 22.6 bits (43), Expect(4) = 2e-022
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 541 VQRERPALLDQV 506
>gb|AV926974.1|AV926974 AV926974 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd26e13 5', mRNA sequence
Length = 556
Score = 210 bits (454), Expect(5) = 1e-074
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +2
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 170 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 349
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 350 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 505
Score = 188 bits (404), Expect(4) = 6e-060
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 504 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 325
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 324 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 145
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 144 TSWLCCS 124
Score = 57.9 bits (120), Expect(5) = 1e-028
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 505 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 371
Score = 55.1 bits (114), Expect(5) = 1e-074
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = -1 / +2
Query: 1176 LAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
LAG P+ +GTEIAMASYCSELQY P+TN
Sbjct: 2 LAGSRNPSLDYGFKGTEIAMASYCSELQYLANPVTN 109
Score = 54.2 bits (112), Expect(4) = 2e-021
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +1
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 265 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 366
Score = 48.7 bits (100), Expect(4) = 6e-060
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +2 / -2
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPA 1174
LV G+ YWSSEQ*EAMAISVPL+ + G+ PA
Sbjct: 108 LVTGLARYWSSEQ*EAMAISVPLKP*SKLGLRLPA 4
Score = 48.7 bits (100), Expect(5) = 1e-028
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -1
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 271 DVLLKVAEVDGLAQRHHVCGGHELQDV 191
Score = 40.5 bits (82), Expect(4) = 2e-021
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +1
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 169 QEDRRGCGHPEAHVLHIH 222
Score = 38.6 bits (78), Expect(4) = 2e-021
Identities = 17/36 (47%), Positives = 18/36 (50%)
Frame = -3 / +1
Query: 1174 GRXRNPSLDYGFKGHRDRHGXXXXXAPVXGHPHHQP 1067
GR P L +GHRDRHG APV P QP
Sbjct: 4 GRQPQPQLGLRLQGHRDRHGFLLL*APVPCQPGDQP 111
Score = 37.7 bits (76), Expect(5) = 1e-074
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELR 625
G+AE E +VFSKI +FEEELR
Sbjct: 494 GEAESEATVFSKINKFEEELR 556
Score = 33.6 bits (67), Expect(5) = 1e-028
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -1
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 109 VGHRVGKVLELRAVGSHGDLGA 44
Score = 31.3 bits (62), Expect(5) = 1e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 168 AETRPREFTSW 136
Score = 29.9 bits (59), Expect(5) = 1e-074
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 134 NQDVNSLGLVSARK 175
Score = 27.6 bits (54), Expect(5) = 1e-028
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 1135 P*SRSPGWGC 1164
P*SRSP WGC
Sbjct: 44 P*SRSPSWGC 15
Score = 27.6 bits (54), Expect(4) = 6e-060
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 641 NLVILENTEGSRSASP 688
NL+ILENT S SASP
Sbjct: 540 NLLILENTVASLSASP 493
Score = 24.4 bits (47), Expect(4) = 6e-060
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 132 CCSALWTWLVTG 97
Score = 24.0 bits (46), Expect(4) = 2e-021
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +3
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 225 WRCARPSTSA 254
Score = 22.6 bits (43), Expect(5) = 1e-074
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 110 HVQSAEQH 133
>gb|BI957636.1|BI957636 HVSMEn0010H09f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0010H09f,
mRNA sequence
Length = 637
Score = 209 bits (450), Expect(4) = 3e-073
Identities = 89/112 (79%), Positives = 102/112 (91%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 261 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 440
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL+ G E +
Sbjct: 441 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTXGPGEAD 596
Score = 188 bits (404), Expect(4) = 2e-063
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 595 SASPGPXVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 416
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 415 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 236
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 235 TSWLCCS 215
Score = 72.1 bits (151), Expect(4) = 3e-073
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1 / +3
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGLTSNLAG P+ +GTEIAMASYCSELQY P+TN
Sbjct: 72 NNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPVTN 200
Score = 62.0 bits (129), Expect(4) = 2e-063
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2 / -1
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+ YWSSEQ*EAMAISVPL+ + G+ PAR EVSPL
Sbjct: 199 LVTGLARYWSSEQ*EAMAISVPLKP*SKLGLRLPARLEVSPL 74
Score = 59.7 bits (124), Expect(5) = 3e-029
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = +1 / -3
Query: 685 AAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
A +GVVH+HGA FLHQ A V+ V EHGLAVDG D+
Sbjct: 581 AXGQGVVHEHGAQFLHQWVVGAACVVGVAEHGLAVDGGDE 462
Score = 54.2 bits (112), Expect(4) = 9e-025
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +2
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 356 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 457
Score = 50.1 bits (103), Expect(4) = 9e-025
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = -3 / +2
Query: 1195 QRAHLKPGRXRNPSLDYGFKGHRDRHGXXXXXAPVXGHPHHQP 1067
QRA L+PGR P L +GHRDRHG APV P QP
Sbjct: 74 QRADLQPGRQPQPQLGLRLQGHRDRHGFLLL*APVPCQPGDQP 202
Score = 48.7 bits (100), Expect(5) = 3e-029
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 362 DVLLKVAEVDGLAQRHHVCGGHELQDV 282
Score = 40.5 bits (82), Expect(4) = 9e-025
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 260 QEDRRGCGHPEAHVLHIH 313
Score = 33.6 bits (67), Expect(5) = 3e-029
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 200 VGHRVGKVLELRAVGSHGDLGA 135
Score = 31.3 bits (62), Expect(5) = 3e-029
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 259 AETRPREFTSW 227
Score = 29.9 bits (59), Expect(4) = 3e-073
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 225 NQDVNSLGLVSARK 266
Score = 27.6 bits (54), Expect(5) = 3e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 1135 P*SRSPGWGC 1164
P*SRSP WGC
Sbjct: 135 P*SRSPSWGC 106
Score = 25.8 bits (50), Expect(4) = 2e-063
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / -1
Query: 644 LVILENTEGSRSASP 688
LV+LENT S SASP
Sbjct: 628 LVVLENTVASLSASP 584
Score = 24.4 bits (47), Expect(4) = 2e-063
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 223 CCSALWTWLVTG 188
Score = 24.0 bits (46), Expect(4) = 9e-025
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 316 WRCARPSTSA 345
Score = 22.6 bits (43), Expect(4) = 3e-073
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 201 HVQSAEQH 224
>gb|BI959811.1|BI959811 HVSMEn0021K21f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0021K21f,
mRNA sequence
Length = 668
Score = 210 bits (454), Expect(4) = 1e-072
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 96 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 275
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 276 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 431
Score = 188 bits (404), Expect(3) = 4e-055
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 430 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 251
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 250 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 71
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 70 TSWLCCS 50
Score = 68.0 bits (142), Expect(4) = 1e-072
Identities = 30/64 (46%), Positives = 39/64 (60%)
Frame = -1 / +3
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ G AP+ + I +S S PL +F RE
Sbjct: 420 GEAESEATVFSKINKFEEELRSALPREIEAARVALENGAAPIPSLIKESGSVPLVQFGRE 599
Query: 507 ELGC 496
L C
Sbjct: 600 GLRC 611
Score = 57.9 bits (120), Expect(3) = 1e-020
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 431 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 297
Score = 48.7 bits (100), Expect(3) = 1e-020
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -1
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 197 DVLLKVAEVDGLAQRHHVCGGHELQDV 117
Score = 41.8 bits (85), Expect(3) = 4e-055
Identities = 23/62 (37%), Positives = 24/62 (38%)
Frame = +2 / -2
Query: 503 SSSRTKRYSGNDRLSAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSA 682
S SR G LS IR GA P NL+ILENT S SA
Sbjct: 604 SPSRPNWTRGTXPLSLIRLGMGAAPFSKATRAASISRGRADRSSSSNLLILENTVASLSA 425
Query: 683 SP 688
SP
Sbjct: 424 SP 419
Score = 31.3 bits (62), Expect(3) = 1e-020
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 94 AETRPREFTSW 62
Score = 29.9 bits (59), Expect(4) = 1e-072
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 60 NQDVNSLGLVSARK 101
Score = 24.4 bits (47), Expect(3) = 4e-055
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 58 CCSALWTWLVTG 23
Score = 22.6 bits (43), Expect(4) = 1e-072
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 36 HVQSAEQH 59
>gb|AV923115.1|AV923115 AV923115 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd3n19 5', mRNA sequence
Length = 607
Score = 210 bits (454), Expect(4) = 1e-072
Identities = 90/112 (80%), Positives = 103/112 (91%)
Frame = -1 / +2
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 143 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 322
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 323 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 478
Score = 187 bits (403), Expect(4) = 1e-062
Identities = 85/112 (75%), Positives = 92/112 (82%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 477 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 298
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFL 1006
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL
Sbjct: 297 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFL 142
Score = 57.9 bits (120), Expect(5) = 1e-026
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -1
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 478 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 344
Score = 55.1 bits (114), Expect(4) = 1e-072
Identities = 24/40 (60%), Positives = 26/40 (65%)
Frame = -1 / +2
Query: 1188 LTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
LTSNLAG P+ +GTEIAMASYCSELQY N
Sbjct: 2 LTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANQDVN 121
Score = 54.2 bits (112), Expect(4) = 3e-022
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +1
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 238 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 339
Score = 51.5 bits (106), Expect(4) = 1e-062
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2 / -2
Query: 1091 YWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVS 1189
YWSSEQ*EAMAISVPL+ + G+ PAR EVS
Sbjct: 99 YWSSEQ*EAMAISVPLKP*SKLGLRLPARLEVS 1
Score = 48.7 bits (100), Expect(5) = 1e-026
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -1
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 244 DVLLKVAEVDGLAQRHHVCGGHELQDV 164
Score = 41.4 bits (84), Expect(4) = 3e-022
Identities = 18/37 (48%), Positives = 20/37 (54%)
Frame = -3 / +1
Query: 1189 AHLKPGRXRNPSLDYGFKGHRDRHGXXXXXAPVXGHP 1079
A L+PGR P L +GHRDRHG APV P
Sbjct: 1 ADLQPGRQPQPQLGLRLQGHRDRHGFLLL*APVPCQP 111
Score = 40.5 bits (82), Expect(4) = 3e-022
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +1
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 142 QEDRRGCGHPEAHVLHIH 195
Score = 35.4 bits (71), Expect(4) = 1e-072
Identities = 14/20 (70%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEEL 628
G+AE E +VFSKI +FEEEL
Sbjct: 467 GEAESEATVFSKINKFEEEL 526
Score = 32.2 bits (64), Expect(5) = 1e-026
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +1 / -1
Query: 1090 VLELXAVGGHGDLGA 1134
VLEL AVG HGDLGA
Sbjct: 100 VLELRAVGSHGDLGA 56
Score = 31.3 bits (62), Expect(4) = 1e-062
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 141 AETRPREFTSW 109
Score = 29.9 bits (59), Expect(4) = 1e-072
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 107 NQDVNSLGLVSARK 148
Score = 27.6 bits (54), Expect(5) = 1e-026
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 1135 P*SRSPGWGC 1164
P*SRSP WGC
Sbjct: 56 P*SRSPSWGC 27
Score = 27.6 bits (54), Expect(4) = 1e-062
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 641 NLVILENTEGSRSASP 688
NL+ILENT S SASP
Sbjct: 513 NLLILENTVASLSASP 466
Score = 25.8 bits (50), Expect(5) = 1e-026
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -1
Query: 1007 GRDEAQGVHVLV 1042
GRDEA+ VHVLV
Sbjct: 142 GRDEAERVHVLV 107
Score = 24.0 bits (46), Expect(4) = 3e-022
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +3
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 198 WRCARPSTSA 227
>gb|BI958293.1|BI958293 HVSMEn0014E11f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0014E11f,
mRNA sequence
Length = 675
Score = 207 bits (446), Expect(6) = 7e-072
Identities = 88/112 (78%), Positives = 102/112 (91%)
Frame = -1 / +2
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VT V+KKVLTMNP+G+LSS
Sbjct: 101 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTHVSKKVLTMNPTGDLSS 280
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E +
Sbjct: 281 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAD 436
Score = 188 bits (404), Expect(5) = 1e-058
Identities = 86/127 (67%), Positives = 96/127 (75%)
Frame = +2 / -1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 435 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 256
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 255 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREF 76
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 75 TSWLCCS 55
Score = 54.7 bits (113), Expect(6) = 7e-072
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = -1 / +1
Query: 645 RFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVREE 505
+F+EEL + LP+ GTAP+ N I +S+SFPLY F REE
Sbjct: 466 KFQEELXSALPREIDAARVAFENGTAPIPNLIKESKSFPLYPFFREE 606
Score = 38.6 bits (78), Expect(5) = 1e-058
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = +2 / -2
Query: 506 SSRTKRYSGNDRLSAIRFATGAVP 577
SSR K YSGND LS IR GAVP
Sbjct: 605 SSRKKGYSGNDLLSLIRLGMGAVP 534
Score = 29.9 bits (59), Expect(6) = 7e-072
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 65 NQDVNSLGLVSARK 106
Score = 27.6 bits (54), Expect(6) = 7e-072
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 1107 CSELQYXGTPITN 1069
CSELQY P+TN
Sbjct: 2 CSELQYLANPVTN 40
Score = 26.3 bits (51), Expect(5) = 1e-058
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2 / -1
Query: 644 LVILENTEGSRSASP 688
LVILENT S SASP
Sbjct: 468 LVILENTVASLSASP 424
Score = 24.9 bits (48), Expect(5) = 1e-058
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / -1
Query: 1070 LVMGVPXYWSSEQ 1108
LV G+ YWSSEQ
Sbjct: 39 LVTGLARYWSSEQ 1
Score = 24.4 bits (47), Expect(5) = 1e-058
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 63 CCSALWTWLVTG 28
Score = 22.6 bits (43), Expect(6) = 7e-072
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKIT 646
G+A+ + +VFSKIT
Sbjct: 425 GEADSDATVFSKIT 466
Score = 22.6 bits (43), Expect(6) = 7e-072
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 41 HVQSAEQH 64
>gb|AV925745.1|AV925745 AV925745 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd25k05 5', mRNA sequence
Length = 671
Score = 203 bits (438), Expect(4) = 1e-071
Identities = 87/104 (83%), Positives = 98/104 (94%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 358 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 537
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHAL 694
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL
Sbjct: 538 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHAL 669
Score = 182 bits (392), Expect(3) = 2e-059
Identities = 83/120 (69%), Positives = 93/120 (77%)
Frame = +2 / -1
Query: 692 LRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGFMVSTFLA 871
+RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GFMVSTF
Sbjct: 671 VRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFD 492
Query: 872 TWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGVHVLVCAA 1051
T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL + +C +
Sbjct: 491 TCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREFTSWLCCS 312
Score = 72.1 bits (151), Expect(4) = 1e-071
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1 / +1
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGLTSNLAG P+ +GTEIAMASYCSELQY P+TN
Sbjct: 169 NNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPVTN 297
Score = 62.0 bits (129), Expect(3) = 2e-059
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2 / -1
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+ YWSSEQ*EAMAISVPL+ + G+ PAR EVSPL
Sbjct: 296 LVTGLARYWSSEQ*EAMAISVPLKP*SKLGLRLPARLEVSPL 171
Score = 55.1 bits (114), Expect(5) = 7e-028
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +1 / -3
Query: 694 EGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
+GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 669 QGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 559
Score = 54.2 bits (112), Expect(4) = 9e-025
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +3
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 453 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 554
Score = 50.1 bits (103), Expect(4) = 9e-025
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = -3 / +3
Query: 1195 QRAHLKPGRXRNPSLDYGFKGHRDRHGXXXXXAPVXGHPHHQP 1067
QRA L+PGR P L +GHRDRHG APV P QP
Sbjct: 171 QRADLQPGRQPQPQLGLRLQGHRDRHGFLLL*APVPCQPGDQP 299
Score = 48.7 bits (100), Expect(5) = 7e-028
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 459 DVLLKVAEVDGLAQRHHVCGGHELQDV 379
Score = 40.5 bits (82), Expect(4) = 9e-025
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +3
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 357 QEDRRGCGHPEAHVLHIH 410
Score = 33.6 bits (67), Expect(5) = 7e-028
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 297 VGHRVGKVLELRAVGSHGDLGA 232
Score = 31.3 bits (62), Expect(5) = 7e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 356 AETRPREFTSW 324
Score = 29.9 bits (59), Expect(4) = 1e-071
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 322 NQDVNSLGLVSARK 363
Score = 27.6 bits (54), Expect(5) = 7e-028
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 1135 P*SRSPGWGC 1164
P*SRSP WGC
Sbjct: 232 P*SRSPSWGC 203
Score = 24.4 bits (47), Expect(3) = 2e-059
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 320 CCSALWTWLVTG 285
Score = 24.0 bits (46), Expect(4) = 9e-025
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +2
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 413 WRCARPSTSA 442
Score = 22.6 bits (43), Expect(4) = 1e-071
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 298 HVQSAEQH 321
>gb|BG414191.1|BG414191 HVSMEk0001A07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0001A07f, mRNA sequence
Length = 586
Score = 192 bits (414), Expect(2) = 1e-070
Identities = 76/111 (68%), Positives = 90/111 (81%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 154 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 333
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 334 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 486
Score = 146 bits (313), Expect(2) = 2e-053
Identities = 66/108 (61%), Positives = 69/108 (63%)
Frame = +2 / -3
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSS+GS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 476 GRGSPFHSLRHSSIGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 297
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 296 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 153
Score = 95.5 bits (202), Expect(2) = 1e-070
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = -1 / +1
Query: 834 LSSARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
LSSARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 1 LSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 165
Score = 84.0 bits (177), Expect(2) = 2e-053
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALE 832
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE
Sbjct: 164 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALE 3
>gb|BM816192.1|BM816192 HC110D06_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC110D06_T3.ab1 similar to DNA-(apurinic or apyrimidinic
site) lyase,Histidine ammonia-lyase,Phenylalanine
ammonia-lyase,, mRNA sequence
Length = 904
Score = 199 bits (429), Expect(4) = 2e-070
Identities = 85/103 (82%), Positives = 96/103 (93%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 444 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 623
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHA 697
ARFSEK LI+AIDREAVF+YA+D S + PLMQK+RAVLVDHA
Sbjct: 624 ARFSEKSLITAIDREAVFSYADDPCSANYPLMQKLRAVLVDHA 752
Score = 178 bits (383), Expect(3) = 3e-058
Identities = 81/119 (68%), Positives = 91/119 (76%)
Frame = +2 / -1
Query: 695 RAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGFMVSTFLAT 874
+AWSTSTAR+FCISG L L SSA +NTASRSMA++ FSLKRALE SP GFMVSTF T
Sbjct: 754 QAWSTSTARSFCISG*LALHGSSA*LNTASRSMAVMRLFSLKRALERSPVGFMVSTFFDT 575
Query: 875 WVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGVHVLVCAA 1051
VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL + +C +
Sbjct: 574 CVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREFTSWLCCS 398
Score = 72.1 bits (151), Expect(4) = 2e-070
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -1 / +3
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGLTSNLAG P+ +GTEIAMASYCSELQY P+TN
Sbjct: 255 NNGLTSNLAGSRNPSLDYGFKGTEIAMASYCSELQYLANPVTN 383
Score = 62.0 bits (129), Expect(3) = 3e-058
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +2 / -1
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+ YWSSEQ*EAMAISVPL+ + G+ PAR EVSPL
Sbjct: 382 LVTGLARYWSSEQ*EAMAISVPLKP*SRLGLRLPARLEVSPL 257
Score = 54.2 bits (112), Expect(4) = 8e-024
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / +2
Query: 910 EHQGVGEEHRDPGGQEGADHEPLGRALQRPLQRE 809
EHQ + EE RD G +EGADHEP R LQR LQRE
Sbjct: 539 EHQDLREELRDAGVEEGADHEPYRRPLQRALQRE 640
Score = 54.2 bits (112), Expect(5) = 2e-028
Identities = 22/36 (61%), Positives = 25/36 (69%)
Frame = +1 / -3
Query: 697 GVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 752 GVVHEHGAQLLHQWVVGAAWVVGVAEHGLAVDGGDE 645
Score = 48.7 bits (100), Expect(5) = 2e-028
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -3
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 545 DVLLKVAEVDGLAQRHHVCGGHELQDV 465
Score = 46.9 bits (96), Expect(4) = 8e-024
Identities = 21/43 (48%), Positives = 23/43 (53%)
Frame = -3 / +2
Query: 1195 QRAHLKPGRXRNPSLDYGFKGHRDRHGXXXXXAPVXGHPHHQP 1067
QRA L+PGR P +GHRDRHG APV P QP
Sbjct: 257 QRADLQPGRQPQPQPGLRLQGHRDRHGFLLL*APVPCQPGDQP 385
Score = 40.5 bits (82), Expect(4) = 8e-024
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 1006 QEDRRGDRHPEAHVVHLH 953
QEDRRG HPEAHV+H+H
Sbjct: 443 QEDRRGCGHPEAHVLHIH 496
Score = 33.6 bits (67), Expect(5) = 2e-028
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 383 VGHRVGKVLELRAVGSHGDLGA 318
Score = 31.3 bits (62), Expect(5) = 2e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -1
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 442 AETRPREFTSW 410
Score = 30.4 bits (60), Expect(5) = 2e-028
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 1135 P*SRSPGWGC 1164
P*SRSPGWGC
Sbjct: 318 P*SRSPGWGC 289
Score = 29.9 bits (59), Expect(4) = 2e-070
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 408 NQDVNSLGLVSARK 449
Score = 24.4 bits (47), Expect(3) = 3e-058
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -1
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 406 CCSALWTWLVTG 371
Score = 24.0 bits (46), Expect(4) = 8e-024
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / +1
Query: 950 WRCARPWTCA 921
WRCARP T A
Sbjct: 499 WRCARPSTSA 528
Score = 22.6 bits (43), Expect(4) = 2e-070
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 384 HVQSAEQH 407
>gb|BI956268.1|BI956268 HVSMEn0001M16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0001M16f, mRNA sequence
Length = 613
Score = 186 bits (401), Expect(2) = 3e-069
Identities = 74/111 (66%), Positives = 88/111 (79%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRF RE
Sbjct: 161 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFXRE 340
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PL IN+
Sbjct: 341 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLAINV 493
Score = 143 bits (307), Expect(2) = 5e-053
Identities = 65/106 (61%), Positives = 67/106 (63%)
Frame = +2 / -2
Query: 371 GLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRLSA 550
G P HSLRHSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSR KRYSGND LS
Sbjct: 477 GSPFHSLRHSSMGSISLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRXKRYSGNDLLSL 298
Query: 551 IRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
IR GAVP NL+ILENT S SASP
Sbjct: 297 IRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 160
Score = 96.4 bits (204), Expect(2) = 3e-069
Identities = 41/56 (73%), Positives = 49/56 (87%)
Frame = -1 / +2
Query: 837 ELSSARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
+LSSARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 5 DLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 172
Score = 85.4 bits (180), Expect(2) = 5e-053
Identities = 40/56 (71%), Positives = 45/56 (80%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESS 838
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE S
Sbjct: 171 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERS 4
>gb|BI778700.2|BI778700 EBro01_SQ001_C06_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ001_C06 5', mRNA sequence
Length = 586
Score = 150 bits (322), Expect(2) = 8e-068
Identities = 62/95 (65%), Positives = 79/95 (83%)
Frame = -1 / +2
Query: 957 YIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREA 778
++VALCQA+DLRH+EEN+K +V+N V QVAKK L+MN G L ARF EK+L++AIDREA
Sbjct: 2 FLVALCQAIDLRHIEENMKTAVRNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREA 181
Query: 777 VFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAER 673
VF YA+D S + PLMQK+RAVLV+HAL++GD ER
Sbjct: 182 VFAYADDPCSPNYPLMQKLRAVLVEHALANGDGER 286
Score = 127 bits (273), Expect(2) = 8e-068
Identities = 51/107 (47%), Positives = 69/107 (64%)
Frame = -1 / +2
Query: 699 ALSSGDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYR 520
A G+ E S+F+K+ FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 266 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 445
Query: 519 FVREELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWD 379
FVRE G +LTGE+ +SPGEE NKV V +++ K +DP+LECLKEW+
Sbjct: 446 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWN 586
Score = 127 bits (271), Expect(2) = 2e-029
Identities = 59/94 (62%), Positives = 66/94 (70%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
+RS SPL A STSTAR+FCISG L L SSAY NTASRS+A+ SFS KRA+ P F
Sbjct: 288 ARSPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLF 109
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSAT 952
M+ FLAT +T F T MFSS WRRS AWH AT
Sbjct: 108 MLRVFLATCITQFLTAVFMFSSMWRRSIAWHRAT 7
Score = 25.4 bits (49), Expect(2) = 2e-029
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1 / -1
Query: 379 VPLLEALEHGVHELALADADEH 444
VPL EAL+ V LAL +H
Sbjct: 586 VPLFEALQQRVDVLALVHGHQH 521
>gb|BI959849.1|BI959849 HVSMEn0022A20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022A20f, mRNA sequence
Length = 623
Score = 194 bits (419), Expect(2) = 1e-067
Identities = 77/111 (69%), Positives = 91/111 (81%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AERE +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 143 GEAEREGTVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 322
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 323 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 475
Score = 147 bits (315), Expect(2) = 1e-050
Identities = 67/108 (62%), Positives = 69/108 (63%)
Frame = +2 / -3
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 465 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 286
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 285 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVPSLSASP 142
Score = 83.1 bits (175), Expect(2) = 1e-067
Identities = 35/49 (71%), Positives = 42/49 (85%)
Frame = -1 / +2
Query: 816 SEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
SEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 8 SEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 154
Score = 73.5 bits (154), Expect(2) = 1e-050
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSL 817
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSL
Sbjct: 153 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSL 7
Score = 58.3 bits (121), Expect(3) = 5e-021
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / -2
Query: 355 DVDGQRLAVPLLEALEHGVHELALADADE 441
DVDGQ LAVPLLEALEHGV EL LADA+E
Sbjct: 475 DVDGQGLAVPLLEALEHGVDELVLADAEE 389
Score = 57.9 bits (120), Expect(3) = 5e-021
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 154 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 20
Score = 22.6 bits (43), Expect(3) = 5e-021
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -2
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 307 VQRERPALLDQV 272
>gb|CB881918.1|CB881918 HM11E17w HM Hordeum vulgare subsp. vulgare cDNA clone HM11E17
3-PRIME, mRNA sequence
Length = 620
Score = 145 bits (311), Expect(2) = 5e-067
Identities = 60/92 (65%), Positives = 75/92 (81%)
Frame = -1 / -2
Query: 942 CQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYA 763
CQA+DLRH+EEN+K +V+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA
Sbjct: 619 CQAIDLRHIEENMKTAVRNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYA 440
Query: 762 EDAASGSLPLMQKVRAVLVDHALSSGDAEREP 667
+D S + PLMQK+RAVLV+HAL++GD ER P
Sbjct: 439 DDPCSPNYPLMQKLRAVLVEHALANGDGERAP 344
Score = 130 bits (278), Expect(2) = 5e-067
Identities = 51/108 (47%), Positives = 70/108 (64%)
Frame = -1 / -3
Query: 693 SSGDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFV 514
++ A E S+F+K+ FE+ +RA LP+ GT NRI D RS+PLY+FV
Sbjct: 363 ATASAPLETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQFV 184
Query: 513 REELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKP 370
RE G +LTGE+ +SPGEE NKV V +++ K +DP+LECLKEW +P
Sbjct: 183 REVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWTARP 40
Score = 126 bits (269), Expect(2) = 4e-045
Identities = 58/92 (63%), Positives = 65/92 (70%)
Frame = +2 / +3
Query: 668 GSRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEG 847
G+RS SPL A STSTAR+FCISG L L SSAY NTASRS+A+ SFS KRA+ P
Sbjct: 345 GARSPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPML 524
Query: 848 FMVSTFLATWVTVFFTDALMFSSRWRRSTAWH 943
FM+ FLAT +T F T MFSS WRRS AWH
Sbjct: 525 FMLRVFLATCITQFLTAVFMFSSMWRRSIAWH 620
Score = 76.2 bits (160), Expect(2) = 4e-045
Identities = 42/104 (40%), Positives = 46/104 (44%)
Frame = +2 / +2
Query: 371 GLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRLSA 550
G HSLRHSS GS L M T+TL SSPGD SPVR + P +SRT SG +R S
Sbjct: 41 GRAVHSLRHSSSGSMCLRSFMATSTLFSSSPGDRVFSPVRYSVPHTSRTNW*SG*ERQSL 220
Query: 551 IRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSA 682
IR VP N L E SR A
Sbjct: 221 IRLGASGVPFSTDARAASTSLGSAARMFCSNSATLAKMEVSRGA 352
>gb|BM372206.2|BM372206 EBro03_SQ004_F04_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_F04 5', mRNA sequence
Length = 477
Score = 209 bits (450), Expect(4) = 3e-066
Identities = 89/110 (80%), Positives = 102/110 (92%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLMSSTY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 144 RKTAEAVDILKLMSSTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 323
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAE 676
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E
Sbjct: 324 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGE 473
Score = 186 bits (401), Expect(3) = 2e-055
Identities = 85/125 (68%), Positives = 95/125 (76%)
Frame = +2 / -3
Query: 677 SASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGFMV 856
S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GFMV
Sbjct: 472 SPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGFMV 293
Query: 857 STFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGVHV 1036
STF T VT FFT+ LMFSSRWRRS AWHSATM V+DMSFRMS ASAVFL +
Sbjct: 292 STFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVEDMSFRMSTASAVFLAETRPREFTS 113
Query: 1037 LVCAA 1051
+C +
Sbjct: 112 WLCCS 98
Score = 57.0 bits (118), Expect(4) = 3e-025
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1 / -2
Query: 685 AAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 464 AGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 345
Score = 48.7 bits (100), Expect(4) = 3e-025
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V G HELQDV
Sbjct: 245 DVLLKVAEVDGLAQRHHVCGGHELQDV 165
Score = 48.7 bits (100), Expect(4) = 3e-066
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / +3
Query: 1137 RGTEIAMASYCSELQYXGTPITN 1069
+GTEIAMASYCSELQY P+TN
Sbjct: 15 KGTEIAMASYCSELQYLANPVTN 83
Score = 44.6 bits (91), Expect(3) = 2e-055
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLE 1141
LV G+ YWSSEQ*EAMAISVPL+
Sbjct: 82 LVTGLARYWSSEQ*EAMAISVPLK 11
Score = 33.6 bits (67), Expect(4) = 3e-025
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / -2
Query: 1069 VGDGGAXVLELXAVGGHGDLGA 1134
VG VLEL AVG HGDLGA
Sbjct: 83 VGHRVGKVLELRAVGSHGDLGA 18
Score = 31.3 bits (62), Expect(4) = 3e-025
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 142 AETRPREFTSW 110
Score = 29.9 bits (59), Expect(4) = 3e-066
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 108 NQDVNSLGLVSARK 149
Score = 24.4 bits (47), Expect(3) = 2e-055
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 106 CCSALWTWLVTG 71
Score = 22.6 bits (43), Expect(4) = 3e-066
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 84 HVQSAEQH 107
>gb|AL505275.1|AL505275 AL505275 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07P09V 5', mRNA sequence
Length = 487
Score = 145 bits (311), Expect(2) = 5e-066
Identities = 62/84 (73%), Positives = 72/84 (85%)
Frame = -1 / +1
Query: 921 HLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAEDAASGS 742
HLEEN K SVKN VTQV+KKVLTMNP+G+LSSARF EK LI+ IDREAVF+YA+DA S +
Sbjct: 1 HLEENXKTSVKNCVTQVSKKVLTMNPTGDLSSARFIEKSLITVIDREAVFSYADDACSAN 180
Query: 741 LPLMQKVRAVLVDHALSSGDAERE 670
PLMQK+RAVLVDHAL++G E E
Sbjct: 181 YPLMQKLRAVLVDHALTAGPGEAE 252
Score = 127 bits (271), Expect(2) = 5e-066
Identities = 52/82 (63%), Positives = 61/82 (74%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 241 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 420
Query: 507 ELGCVFLTGERLKSPGEECNKV 442
ELGCV+L GE+L SPGEEC KV
Sbjct: 421 ELGCVYLXGEKLLSPGEECTKV 486
Score = 124 bits (265), Expect(2) = 2e-052
Identities = 57/83 (68%), Positives = 64/83 (77%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSM ++ FS+KRALE SP GF
Sbjct: 251 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMTVMRLFSMKRALERSPVGF 72
Query: 851 MVSTFLATWVTVFFTDALMFSSR 919
MVSTF T VT FFT+ MFSSR
Sbjct: 71 MVSTFFDTCVTQFFTEVXMFSSR 3
Score = 102 bits (217), Expect(2) = 2e-052
Identities = 47/82 (57%), Positives = 49/82 (59%)
Frame = +2 / -3
Query: 443 TLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRLSAIRFATGAVPXXXXXXXXXXXXXXX 622
TL+HSSPGD S SP R TQPSSSRTKRYSGND LS IR GAVP
Sbjct: 485 TLVHSSPGDSSFSPXRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFSKATRAASISRGRA 306
Query: 623 XXXXXXNLVILENTEGSRSASP 688
NL+ILENT S SASP
Sbjct: 305 DRSSSSNLLILENTVASLSASP 240
>gb|AV917458.1|AV917458 AV917458 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10a01 3', mRNA sequence
Length = 701
Score = 192 bits (414), Expect(2) = 4e-065
Identities = 76/111 (68%), Positives = 90/111 (81%)
Frame = -1 / -2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 577 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 398
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 397 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 245
Score = 148 bits (317), Expect(2) = 2e-049
Identities = 67/108 (62%), Positives = 69/108 (63%)
Frame = +2 / +3
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 255 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 434
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 435 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 578
Score = 76.7 bits (161), Expect(2) = 4e-065
Identities = 32/45 (71%), Positives = 39/45 (86%)
Frame = -1 / -2
Query: 804 LISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 700 LITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 566
Score = 68.4 bits (143), Expect(2) = 2e-049
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +2 / +3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALI 802
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++
Sbjct: 567 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVM 698
Score = 58.3 bits (121), Expect(3) = 5e-021
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +1 / +2
Query: 355 DVDGQRLAVPLLEALEHGVHELALADADE 441
DVDGQ LAVPLLEALEHGV EL LADA+E
Sbjct: 245 DVDGQGLAVPLLEALEHGVDELVLADAEE 331
Score = 57.9 bits (120), Expect(3) = 5e-021
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / +2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 566 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 700
Score = 22.6 bits (43), Expect(3) = 5e-021
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +2
Query: 523 VQRERPAVRDPV 558
VQRERPA+ D V
Sbjct: 413 VQRERPALLDQV 448
>gb|BQ767013.1|BQ767013 EBro08_SQ007_A24_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_A24 5', mRNA sequence
Length = 690
Score = 154 bits (331), Expect(2) = 6e-065
Identities = 62/106 (58%), Positives = 77/106 (72%)
Frame = -1 / +3
Query: 678 EREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVREELG 499
+ E SV +K+ FEEELR LP+ GTA + NRI + RS+PLYRFVREELG
Sbjct: 261 DAETSVLAKVALFEEELRKTLPRAVEAARAAVESGTAEMPNRITECRSYPLYRFVREELG 440
Query: 498 CVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPI 361
V+LTGE+ +SPGEE NKV V I+QGK +D +LECLKEW+G+PLPI
Sbjct: 441 TVYLTGEKTRSPGEELNKVLVAINQGKHIDALLECLKEWNGEPLPI 578
Score = 114 bits (243), Expect(2) = 6e-065
Identities = 49/85 (57%), Positives = 65/85 (76%)
Frame = -1 / +3
Query: 930 DLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAEDAA 751
DLRH+EEN+K++VK+ V VAKK L+ N +G L ARF EK+L+ I+REAVF YA+D
Sbjct: 3 DLRHIEENVKSAVKSCVMTVAKKTLSTNSTGGLHVARFCEKDLLQEIEREAVFAYADDPC 182
Query: 750 SGSLPLMQKVRAVLVDHALSSGDAE 676
S + PLM+K+R VLV+ ALS+G AE
Sbjct: 183 SPNYPLMKKLRGVLVERALSNGMAE 257
Score = 103 bits (220), Expect = 2e-021
Identities = 53/118 (44%), Positives = 58/118 (49%)
Frame = +2 / -3
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSS S LPWLM T+TLL SSPGD SPVR T PSSSRT R G +R
Sbjct: 574 GRGSPFHSLRHSSSASMCLPWLMATSTLLSSSPGDRVFSPVRYTVPSSSRTNR*RGYERH 395
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASPLLRAWSTSTA 718
S I AVP N NTE S S S + + ST+
Sbjct: 394 SVILLGISAVPLSTAARAASTARGSVLRSSSSNKATFANTEVSASNSAMPLERARSTS 221
Score = 88.1 bits (186), Expect(2) = 3e-021
Identities = 47/87 (54%), Positives = 54/87 (62%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S SA PL RA STST R+F +SG L L SSA NTASRS++ SFS KRA P
Sbjct: 262 SNSAMPLERARSTSTPRSFFMSG*LGLQGSSA*ANTASRSISWSRSFSQKRAT*RPPVEL 83
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRS 931
++S F AT +T T L FSS WRRS
Sbjct: 82 VLSVFFATVITQLLTALLTFSSMWRRS 2
Score = 36.8 bits (74), Expect(2) = 3e-021
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +1 / -2
Query: 361 DGQRLAVPLLEALEHGVHELALADADEH 444
DGQ AVPLLEAL+ + LAL + EH
Sbjct: 578 DGQGFAVPLLEALKQCIDVLALVNGHEH 495
>gb|CB882049.1|CB882049 HM11L11w HM Hordeum vulgare subsp. vulgare cDNA clone HM11L11
3-PRIME, mRNA sequence
Length = 658
Score = 139 bits (298), Expect(2) = 5e-064
Identities = 55/113 (48%), Positives = 74/113 (65%)
Frame = -1 / -3
Query: 699 ALSSGDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYR 520
A G+ E S+F+K+ FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 428 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 249
Query: 519 FVREELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPI 361
FVRE G +LTGE+ +SPGEE NKV V +++ K +DP+LECLKEW+G PLP+
Sbjct: 248 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPL 90
Score = 126 bits (269), Expect(2) = 5e-064
Identities = 53/83 (63%), Positives = 67/83 (80%)
Frame = -1 / -3
Query: 921 HLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAEDAASGS 742
H+EEN+K +V+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA+D S +
Sbjct: 656 HIEENMKTAVRNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPN 477
Query: 741 LPLMQKVRAVLVDHALSSGDAER 673
PLMQK+RAVLV+HAL++GD ER
Sbjct: 476 YPLMQKLRAVLVEHALANGDGER 408
Score = 106 bits (227), Expect(2) = 4e-024
Identities = 51/84 (60%), Positives = 58/84 (69%)
Frame = +2 / +1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
+RS SPL A STSTAR+FCISG L L SSAY NTASRS+A+ SFS KRA+ P F
Sbjct: 406 ARSPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLF 585
Query: 851 MVSTFLATWVTVFFTDALMFSSRW 922
M+ FLAT +T F T MFSS W
Sbjct: 586 MLRVFLATCITQFLTAVFMFSSMW 657
Score = 27.6 bits (54), Expect(2) = 4e-024
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = +1 / +3
Query: 367 QRLAVPLLEALEHGVHELALADADEH 444
Q AVPL EAL+ V LAL +H
Sbjct: 96 QGRAVPLFEALQQRVDVLALVHGHQH 173
>gb|BI779552.2|BI779552 EBro01_SQ004_G11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_G11 5', mRNA sequence
Length = 650
Score = 183 bits (394), Expect(4) = 2e-063
Identities = 77/111 (69%), Positives = 96/111 (86%)
Frame = -1 / +2
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEAIDILK+MSST++VALCQA+DLRH+EEN+K +V+N V QVAKK L+MN G L
Sbjct: 254 RKTAEAIDILKIMSSTFLVALCQAIDLRHIEENMKTAVRNCVMQVAKKTLSMNNMGGLHI 433
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAER 673
ARF EK+L++AIDREAVF YA+D S + PLMQK+RAVLV+HAL++GD+ER
Sbjct: 434 ARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALANGDSER 586
Score = 154 bits (331), Expect(4) = 3e-047
Identities = 73/112 (65%), Positives = 81/112 (72%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
+RS SPL A STSTAR+FCISG L L SSAY NTASRS+A+ SFS KRA+ P F
Sbjct: 588 ARSLSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLF 409
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFL 1006
M+ FLAT +T F T MFSS WRRS AWH AT V+DM FRMSIASAVFL
Sbjct: 408 MLRVFLATCITQFLTAVFMFSSMWRRSIAWHRATRNVEDMIFRMSIASAVFL 253
Score = 66.1 bits (138), Expect(4) = 2e-063
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = -1 / +2
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGL SNL+G P+ +G EIAMASYCSELQ+ G P+TN
Sbjct: 65 NNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 193
Score = 42.8 bits (87), Expect(4) = 3e-047
Identities = 22/42 (52%), Positives = 26/42 (61%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+P SSEQ EAMAIS PL+ + G+ P R E PL
Sbjct: 192 LVTGLPKNCSSEQYEAMAISAPLKP*SKLGLRPPDRLEGRPL 67
Score = 28.1 bits (55), Expect(4) = 2e-063
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGL+S+++
Sbjct: 218 NQDVNSLGLISSRK 259
Score = 24.4 bits (47), Expect(4) = 3e-047
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 216 CCSALWTWLVTG 181
Score = 24.0 bits (46), Expect(4) = 3e-047
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / -3
Query: 1011 ETRPREFTSW 1040
E RP EFTSW
Sbjct: 249 EIRPSEFTSW 220
Score = 22.6 bits (43), Expect(4) = 2e-063
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 194 HVQSAEQH 217
>gb|BJ451668.1|BJ451668 BJ451668 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak34p05 5', mRNA sequence
Length = 623
Score = 180 bits (388), Expect(4) = 2e-062
Identities = 76/112 (67%), Positives = 95/112 (84%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEAIDILKLMSST++VALCQA+DLRHLEEN+K +VK+ V VA+K L+ N +G L S
Sbjct: 288 RKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVKTVARKTLSTNSNGHLHS 467
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARF EK+L+ IDREAVF YA+D S + PLMQK+RAVLV+HAL++G+AER+
Sbjct: 468 ARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALANGEAERD 623
Score = 140 bits (301), Expect(4) = 1e-044
Identities = 71/112 (63%), Positives = 78/112 (69%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
SRSASPL +A ST TAR FC+SG L L SSA NTASRS+ SFS KRAL P
Sbjct: 622 SRSASPLAKACSTRTARIFCMSG*LALQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLL 443
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFL 1006
++S FLAT T T L FSSRWRRS AWHSAT V+DMSF MS+ASAVFL
Sbjct: 442 VLSVFLATVFTQLLTAFLTFSSRWRRSIAWHSATRNVEDMSFSMSMASAVFL 287
Score = 66.1 bits (138), Expect(4) = 2e-062
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = -1 / +3
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGL SNL+G P+ +G EIAMASYCSELQ+ G P+TN
Sbjct: 99 NNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 227
Score = 47.8 bits (98), Expect(4) = 1e-044
Identities = 22/42 (52%), Positives = 27/42 (64%)
Frame = +2 / -2
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G+P WSSEQ +AMAIS PL+ + G+ P R E PL
Sbjct: 226 LVTGLPKNWSSEQYDAMAISAPLKP*SKLGLRPPERLEGRPL 101
Score = 28.1 bits (55), Expect(4) = 2e-062
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGL+S+++
Sbjct: 252 NQDVNSLGLISSRK 293
Score = 24.4 bits (47), Expect(4) = 1e-044
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 250 CCSALWTWLVTG 215
Score = 24.0 bits (46), Expect(4) = 1e-044
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / -2
Query: 1011 ETRPREFTSW 1040
E RPRE TSW
Sbjct: 283 EMRPRELTSW 254
Score = 22.6 bits (43), Expect(4) = 2e-062
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 228 HVQSAEQH 251
>gb|BI959802.1|BI959802 HVSMEn0021J20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021J20f, mRNA sequence
Length = 480
Score = 152 bits (327), Expect(2) = 4e-062
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = -1 / +2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 197 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 376
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDP 406
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DP
Sbjct: 377 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDP 478
Score = 124 bits (266), Expect(2) = 3e-050
Identities = 57/95 (60%), Positives = 59/95 (62%)
Frame = +2 / -1
Query: 404 MGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRLSAIRFATGAVPXX 583
MGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND LS IR GAVP
Sbjct: 480 MGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLLSLIRLGMGAVPFS 301
Query: 584 XXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
NL+ILENT S SASP
Sbjct: 300 KATRAASISRGRADRSSSSNLLILENTVASLSASP 196
Score = 106 bits (226), Expect(2) = 4e-062
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = -1 / +2
Query: 858 LTMNPSGELSSARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDA 679
L NP+G+LSSARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G
Sbjct: 20 LRRNPTGDLSSARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPG 199
Query: 678 ERE 670
E E
Sbjct: 200 EAE 208
Score = 95.0 bits (201), Expect(2) = 3e-050
Identities = 44/63 (69%), Positives = 50/63 (79%)
Frame = +2 / -1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 207 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 28
Query: 851 MVS 859
+S
Sbjct: 27 RLS 19
>gb|AV913531.1|AV913531 AV913531 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22g18 5', mRNA sequence
Length = 562
Score = 182 bits (393), Expect(5) = 2e-061
Identities = 77/111 (69%), Positives = 95/111 (85%)
Frame = -1 / +2
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEAIDILK+MSST++VALCQA+DLRH+EEN+K +V+N V QVAKK L+MN G L
Sbjct: 146 RKTAEAIDILKIMSSTFLVALCQAIDLRHIEENMKTAVRNCVMQVAKKTLSMNNMGGLHI 325
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAER 673
ARF EK+L++AIDREAVF YA+D S + PLMQK+RAVLV+HAL++GD ER
Sbjct: 326 ARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQKLRAVLVEHALANGDGER 478
Score = 154 bits (331), Expect(5) = 8e-043
Identities = 73/112 (65%), Positives = 81/112 (72%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
+RS SPL A STSTAR+FCISG L L SSAY NTASRS+A+ SFS KRA+ P F
Sbjct: 480 ARSPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLF 301
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFL 1006
M+ FLAT +T F T MFSS WRRS AWH AT V+DM FRMSIASAVFL
Sbjct: 300 MLRVFLATCITQFLTAVFMFSSMWRRSIAWHRATRNVEDMIFRMSIASAVFL 145
Score = 44.6 bits (91), Expect(5) = 2e-061
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -1 / +2
Query: 1140 SRGTEIAMASYCSELQYXGTPITN 1069
SR IAMASYCSELQ+ G P+TN
Sbjct: 14 SRAPXIAMASYCSELQFLGNPVTN 85
Score = 33.6 bits (67), Expect(5) = 2e-061
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -1 / +2
Query: 699 ALSSGDAEREPSVFSKITRFEEELRAVLPQ 610
A G+ E S+F+K+ FE+ +RA LP+
Sbjct: 458 ANGDGERALETSIFAKVAEFEQNIRAALPK 547
Score = 28.1 bits (55), Expect(5) = 2e-061
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGL+S+++
Sbjct: 110 NQDVNSLGLISSRK 151
Score = 27.2 bits (53), Expect(5) = 8e-043
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +2 / -2
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAV 1147
LV G+P SSEQ EAMA LE +
Sbjct: 84 LVTGLPKNCSSEQYEAMAXLGALETI 7
Score = 24.4 bits (47), Expect(5) = 8e-043
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 108 CCSALWTWLVTG 73
Score = 24.0 bits (46), Expect(5) = 8e-043
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / -2
Query: 1011 ETRPREFTSW 1040
E RP EFTSW
Sbjct: 141 EIRPSEFTSW 112
Score = 22.6 bits (43), Expect(5) = 2e-061
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 86 HVQSAEQH 109
Score = 22.1 bits (42), Expect(5) = 8e-043
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +1 / -3
Query: 121 RCPPPWHARTSAGGRAQLHKRRKSNATHAR 210
R PPPW A R RR + AR
Sbjct: 560 RPPPPWAAPPGCSARTPPPWRRWRSPGRAR 471
>gb|BF255291.2|BF255291 HVSMEf0006H12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0006H12f, mRNA sequence
Length = 602
Score = 177 bits (380), Expect(4) = 2e-061
Identities = 74/112 (66%), Positives = 94/112 (83%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEAIDILKLMSST++VALCQA+DLRHLEEN+K +VK+ V VA+K L+ N +G L S
Sbjct: 213 RKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKSCVKTVARKTLSTNSNGHLHS 392
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARF EK+L+ IDREAVF YA+D S + PLMQK+RAVLV+HAL++G+A+ +
Sbjct: 393 ARFCEKDLLLTIDREAVFAYADDPCSANYPLMQKMRAVLVEHALANGEADHD 548
Score = 123 bits (263), Expect(4) = 4e-038
Identities = 67/110 (60%), Positives = 74/110 (67%)
Frame = +2 / -2
Query: 677 SASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGFMV 856
SASPL +A ST TAR FC+SG L L SSA NTASRS+ SFS KRAL P ++
Sbjct: 541 SASPLAKACSTRTARIFCMSG*LALQGSSA*ANTASRSIVRRRSFSQKRALCRWPLLLVL 362
Query: 857 STFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFL 1006
S FLAT T T L FSSR RRS A H+AT V+DMSF MSIASAVFL
Sbjct: 361 SVFLATVFTQLLTAFLTFSSR*RRSIA*HNATKNVEDMSFNMSIASAVFL 212
Score = 66.1 bits (138), Expect(4) = 2e-061
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = -1 / +3
Query: 1197 NNGLTSNLAGXATPAWTTASRGTEIAMASYCSELQYXGTPITN 1069
NNGL SNL+G P+ +G EIAMASYCSELQ+ G P+TN
Sbjct: 24 NNGLPSNLSGGRNPSLDYGFKGAEIAMASYCSELQFLGNPVTN 152
Score = 40.0 bits (81), Expect(4) = 4e-038
Identities = 21/42 (50%), Positives = 25/42 (59%)
Frame = +2 / -2
Query: 1070 LVMGVPXYWSSEQ*EAMAISVPLEAVVQAGVAXPARFEVSPL 1195
LV G P SSEQ +AMAIS PL+ + G+ P R E PL
Sbjct: 151 LVTGFPKN*SSEQYDAMAISAPLKP*SKLGLRPPERLEGRPL 26
Score = 28.1 bits (55), Expect(4) = 2e-061
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = -3 / +3
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGL+S+++
Sbjct: 177 NQDVNSLGLISSRK 218
Score = 26.7 bits (52), Expect(4) = 4e-038
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / -2
Query: 1011 ETRPREFTSW 1040
E RPREFTSW
Sbjct: 208 EMRPREFTSW 179
Score = 24.4 bits (47), Expect(4) = 4e-038
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -2
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 175 CCSALWTWLVTG 140
Score = 22.6 bits (43), Expect(4) = 2e-061
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 153 HVQSAEQH 176
>gb|BE214036.1|BE214036 HV_CEb0001P14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001P14f, mRNA sequence
Length = 963
Score = 114 bits (244), Expect(5) = 1e-060
Identities = 48/84 (57%), Positives = 65/84 (77%)
Frame = -1 / +1
Query: 921 HLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAEDAASGS 742
HLEEN+K +VK+ V VA+K L+ + +G L ARF EK+L+ IDREAVF YA+D S +
Sbjct: 187 HLEENVKNAVKSCVKTVARKTLSTDNNGHLHKARFCEKDLLLTIDREAVFAYADDPCSVN 366
Query: 741 LPLMQKVRAVLVDHALSSGDAERE 670
PLMQK+RAVLV+HAL++G+AE +
Sbjct: 367 YPLMQKMRAVLVEHALANGEAEHD 438
Score = 88.1 bits (186), Expect(5) = 2e-038
Identities = 48/83 (57%), Positives = 53/83 (63%)
Frame = +2 / -2
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S SASPL +A ST TAR FC+SG L L SSAY NTASRS+ SFS KRAL P
Sbjct: 437 SCSASPLAKACSTRTARIFCMSG*LTLQGSSAYANTASRSIVSRRSFSQKRALWRWPLLS 258
Query: 851 MVSTFLATWVTVFFTDALMFSSR 919
++S FLAT T T L FSSR
Sbjct: 257 VLSVFLATVFTQLLTAFLTFSSR 189
Score = 72.1 bits (151), Expect(5) = 1e-060
Identities = 32/69 (46%), Positives = 41/69 (59%)
Frame = -1 / +1
Query: 672 EPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVREELGCV 493
E SVF+K+ FE+ELRAVLP GTA NRI + RS+PLYR R+
Sbjct: 442 ETSVFAKLATFEQELRAVLPTEVEAARSAVENGTAAQQNRIXECRSYPLYRVXRKGAWTE 621
Query: 492 FLTGERLKS 466
+LTGE+ +S
Sbjct: 622 YLTGEKTRS 648
Score = 58.8 bits (122), Expect(5) = 1e-060
Identities = 24/28 (85%), Positives = 28/28 (100%)
Frame = -1 / +3
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLR 922
RKTAEAIDILKLMSST++VALCQA++LR
Sbjct: 102 RKTAEAIDILKLMSSTFLVALCQAIELR 185
Score = 47.8 bits (98), Expect(5) = 2e-038
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2 / -3
Query: 923 RRSTAWHSATM*VDDMSFRMSIASAVFL 1006
R S AWH+AT V+DMSF MS+ASAVFL
Sbjct: 184 RSSIAWHNATKNVEDMSFNMSMASAVFL 101
Score = 42.8 bits (87), Expect(5) = 2e-038
Identities = 19/42 (45%), Positives = 21/42 (50%)
Frame = +2 / -3
Query: 371 GLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNT 496
GL S RHS G LPW M TN L H P + SP +T
Sbjct: 745 GLTIPSFRHSGSGXMCLPWFMATNHLAHLIPRKTASSPQSST 620
Score = 32.7 bits (65), Expect(5) = 1e-060
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = -1 / +2
Query: 1107 CSELQYXGTPITNPRAERGAAQTRT*TPWA 1018
CSELQ+ G P ERGA Q R WA
Sbjct: 2 CSELQFWGGAGYQPCPERGATQPRCQLSWA 91
Score = 30.9 bits (61), Expect(5) = 1e-060
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -1 / +3
Query: 441 FVGISQGKLVDPMLECLKE 385
FV ++QGK + P+ ECLKE
Sbjct: 675 FVAMNQGKHIXPLPECLKE 731
Score = 27.2 bits (53), Expect(5) = 2e-038
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDGGAXVLELXA 1107
CCSAL TW+ G A L+ A
Sbjct: 64 CCSALWTWLVPGPAPELKFGA 2
Score = 27.2 bits (53), Expect(5) = 2e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 616 QHRAELLLEPGDLGEH 663
QH ELLLE G LG+H
Sbjct: 498 QHCPELLLERGKLGKH 451
>gb|AJ427587.1|AJ427587 AJ427587 Hordeum vulgare subsp. vulgare primary leaf 7-day old
seedling Hordeum vulgare subsp. vulgare cDNA clone
CE14-16, mRNA sequence
Length = 588
Score = 177 bits (380), Expect(4) = 2e-060
Identities = 75/110 (68%), Positives = 92/110 (83%)
Frame = -1 / +2
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEAIDILKLMSST++VALCQA+DLRHLEEN+K +VKN VT+VA+K L N G L +
Sbjct: 113 RKTAEAIDILKLMSSTFLVALCQAIDLRHLEENVKNAVKNCVTRVARKTLITNGMGGLHN 292
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAE 676
ARF EK+L+ IDREAVF YA+D S PLM+K+RAVLV+HAL++G+AE
Sbjct: 293 ARFCEKDLLQTIDREAVFAYADDPCSAHYPLMKKMRAVLVEHALANGEAE 442
Score = 140 bits (301), Expect(3) = 2e-039
Identities = 68/109 (62%), Positives = 77/109 (70%)
Frame = +2 / -1
Query: 677 SASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGFMV 856
SASPL +A ST+TAR F + G L SSAY NTASRS+ SFS KRAL P F++
Sbjct: 441 SASPLAKACSTNTARIFFMRG*WALQGSSAYANTASRSIV*SRSFSQKRAL*RPPMPFVI 262
Query: 857 STFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVF 1003
FLAT VT F T L FSSRWRRS AWH+AT V+DMSFRMS+ASAVF
Sbjct: 261 RVFLATLVTQFLTAFLTFSSRWRRSMAWHNATKNVEDMSFRMSMASAVF 115
Score = 46.0 bits (94), Expect(4) = 2e-060
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -1 / +2
Query: 672 EPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSR 538
E SVF+K+ FE+EL A LPQ GTA NRI D R
Sbjct: 452 ETSVFAKVATFEQELYAALPQEVEAARGAVENGTAAEPNRITDCR 586
Score = 37.7 bits (76), Expect(4) = 2e-060
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1 / +3
Query: 1119 MASYCSELQYXGTPITN 1069
MASYCSELQ+ G P+TN
Sbjct: 3 MASYCSELQFLGNPVTN 53
Score = 31.3 bits (62), Expect(3) = 2e-039
Identities = 17/44 (38%), Positives = 19/44 (43%)
Frame = +1 / -3
Query: 541 AVRDPVXXXXXXXXXXXXXXXXXXXQHRAELLLEPGDLGEHGGL 672
AV D V Q R ELLLE G+LG+H GL
Sbjct: 583 AVSDTVRFCSGAILHRTSSSLNLLRQCRVELLLECGNLGKHRGL 452
Score = 29.9 bits (59), Expect(4) = 2e-060
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -3 / +2
Query: 1063 CRARSSTNQDVNSLGLVSAQE 1001
C NQDVNSLGL+SA++
Sbjct: 56 CPECGGHNQDVNSLGLISARK 118
Score = 29.0 bits (57), Expect(3) = 2e-039
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / -3
Query: 1070 LVMGVPXYWSSEQ*EAM 1120
LV G+P WSSEQ EAM
Sbjct: 52 LVTGLPKNWSSEQYEAM 2
>gb|BU990224.1|BU990224 HF24H03r HF Hordeum vulgare subsp. vulgare cDNA clone HF24H03
5-PRIME, mRNA sequence
Length = 591
Score = 139 bits (298), Expect(2) = 3e-060
Identities = 55/113 (48%), Positives = 74/113 (65%)
Frame = -1 / +3
Query: 699 ALSSGDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYR 520
A G+ E S+F+K+ FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 222 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 401
Query: 519 FVREELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPI 361
FVRE G +LTGE+ +SPGEE NKV V +++ K +DP+LECLKEW+G PLP+
Sbjct: 402 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKEWNGAPLPL 560
Score = 113 bits (242), Expect(2) = 3e-060
Identities = 49/77 (63%), Positives = 61/77 (79%)
Frame = -1 / +3
Query: 903 KASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAEDAASGSLPLMQK 724
K +V+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA+D S + PLMQK
Sbjct: 12 KTAVRNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSPNYPLMQK 191
Query: 723 VRAVLVDHALSSGDAER 673
+RAVLV+HAL++GD ER
Sbjct: 192 LRAVLVEHALANGDGER 242
>gb|BU988288.1|BU988288 HF17D09r HF Hordeum vulgare subsp. vulgare cDNA clone HF17D09
5-PRIME, mRNA sequence
Length = 481
Score = 205 bits (442), Expect(5) = 3e-060
Identities = 88/112 (78%), Positives = 101/112 (90%)
Frame = -1 / +1
Query: 1005 RKTAEAIDILKLMSSTYIVALCQAVDLRHLEENIKASVKNTVTQVAKKVLTMNPSGELSS 826
RKTAEA+DILKLM TY+VALCQA+DLRHLEENIK SVKN VTQV+KKVLTMNP+G+LSS
Sbjct: 103 RKTAEAVDILKLMFFTYMVALCQAIDLRHLEENIKTSVKNCVTQVSKKVLTMNPTGDLSS 282
Query: 825 ARFSEKELISAIDREAVFTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
ARFSEK LI+AIDREAVF+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 283 ARFSEKSLITAIDREAVFSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 438
Score = 184 bits (396), Expect(3) = 9e-050
Identities = 85/127 (66%), Positives = 95/127 (74%)
Frame = +2 / -3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
S S P +RAWSTSTAR+FCISG L L ASSA +NTASRSMA++ FSLKRALE SP GF
Sbjct: 437 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LNTASRSMAVMRLFSLKRALERSPVGF 258
Query: 851 MVSTFLATWVTVFFTDALMFSSRWRRSTAWHSATM*VDDMSFRMSIASAVFLGRDEAQGV 1030
MVSTF T VT FFT+ LMFSSRWRRS AWHSATM V +MSFRMS ASAVFL +
Sbjct: 257 MVSTFFDTCVTQFFTEVLMFSSRWRRSMAWHSATMYVKNMSFRMSTASAVFLAETRPREF 78
Query: 1031 HVLVCAA 1051
+C +
Sbjct: 77 TSWLCCS 57
Score = 57.9 bits (120), Expect(4) = 3e-024
Identities = 25/45 (55%), Positives = 29/45 (64%)
Frame = +1 / -2
Query: 670 LPLRVAAAEGVVHQHGAHFLHQRQAAAGRVLRVREHGLAVDGADQ 804
L L A +GVVH+HGA LHQ A V+ V EHGLAVDG D+
Sbjct: 438 LGLAGAGGQGVVHEHGAQLLHQWVVGAACVVGVAEHGLAVDGGDE 304
Score = 46.0 bits (94), Expect(4) = 3e-024
Identities = 20/27 (74%), Positives = 22/27 (81%)
Frame = +1 / -2
Query: 904 DVLLEVAQVHGLAQRHDVGGRHELQDV 984
DVLL+VA+V GLAQRH V HELQDV
Sbjct: 204 DVLLKVAEVDGLAQRHHVCEEHELQDV 124
Score = 31.8 bits (63), Expect(4) = 3e-024
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 966 T*ASGCRSPRRSSW 1007
T*ASGC PRRSSW
Sbjct: 142 T*ASGCPQPRRSSW 101
Score = 31.3 bits (62), Expect(5) = 3e-060
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 687 GDAEREPSVFSKITRFEE 634
G+AE E +VFSKI +FEE
Sbjct: 427 GEAESEATVFSKINKFEE 480
Score = 31.3 bits (62), Expect(4) = 3e-024
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3 / -3
Query: 1008 AETRPREFTSW 1040
AETRPREFTSW
Sbjct: 101 AETRPREFTSW 69
Score = 29.9 bits (59), Expect(5) = 3e-060
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = -3 / +1
Query: 1042 NQDVNSLGLVSAQE 1001
NQDVNSLGLVSA++
Sbjct: 67 NQDVNSLGLVSARK 108
Score = 27.6 bits (54), Expect(3) = 9e-050
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 641 NLVILENTEGSRSASP 688
NL+ILENT S SASP
Sbjct: 473 NLLILENTVASLSASP 426
Score = 24.4 bits (47), Expect(3) = 9e-050
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = +1 / -3
Query: 1045 CCSALCTWVGDG 1080
CCSAL TW+ G
Sbjct: 65 CCSALWTWLVTG 30
Score = 22.6 bits (43), Expect(5) = 3e-060
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1067 HVQSAEQH 1044
HVQSAEQH
Sbjct: 43 HVQSAEQH 66
Score = 21.7 bits (41), Expect(5) = 3e-060
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = -1 / +1
Query: 1101 ELQYXGTPITN 1069
ELQY P+TN
Sbjct: 10 ELQYLANPVTN 42
>gb|BJ467713.1|BJ467713 BJ467713 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i14 3', mRNA sequence
Length = 595
Score = 127 bits (273), Expect(2) = 5e-060
Identities = 54/84 (64%), Positives = 67/84 (79%)
Frame = -1 / -3
Query: 924 RHLEENIKASVKNTVTQVAKKVLTMNPSGELSSARFSEKELISAIDREAVFTYAEDAASG 745
RH+EEN+K V+N V QVAKK L+MN G L ARF EK+L++AIDREAVF YA+D S
Sbjct: 593 RHIEENMKTXVRNCVMQVAKKTLSMNNMGGLHIARFCEKDLLTAIDREAVFAYADDPCSP 414
Query: 744 SLPLMQKVRAVLVDHALSSGDAER 673
+ PLMQK+RAVLV+HAL++GD ER
Sbjct: 413 NYPLMQKLRAVLVEHALANGDGER 342
Score = 124 bits (265), Expect(2) = 5e-060
Identities = 51/110 (46%), Positives = 69/110 (62%)
Frame = -1 / -3
Query: 699 ALSSGDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYR 520
A G+ E S+F+K+ FE+ +RA LP+ GT NRI D RS+PLY+
Sbjct: 362 ANGDGERALETSIFAKVAEFEQNIRAALPKEVEAARASVENGTPLAPNRIKDCRSYPLYQ 183
Query: 519 FVREELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKP 370
FVRE G +LTGE+ +SPGEE NKV V +++ K +DP+LECLKE +P
Sbjct: 182 FVREVCGTEYLTGEKTRSPGEELNKVLVAMNERKHIDPLLECLKE*TARP 33
Score = 109 bits (233), Expect(2) = 8e-024
Identities = 52/85 (61%), Positives = 59/85 (69%)
Frame = +2 / +1
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVNTASRSMALISSFSLKRALESSPEGF 850
+RS SPL A STSTAR+FCISG L L SSAY NTASRS+A+ SFS KRA+ P F
Sbjct: 340 ARSPSPLASACSTSTARSFCISG*LGLHGSSAYANTASRSIAVSRSFSQKRAMWRPPMLF 519
Query: 851 MVSTFLATWVTVFFTDALMFSSRWR 925
M+ FLAT +T F T MFSS WR
Sbjct: 520 MLRVFLATCITQFLTXVFMFSSMWR 594
Score = 24.0 bits (46), Expect(2) = 8e-024
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1 / +2
Query: 115 RKRCPPPWHARTSAGGRAQLHKRRKSNATHAR 210
R R PPPW A R RR + AR
Sbjct: 254 RARPPPPWAAPPGCSARTPPPWRRWRSPGRAR 349
>gb|AV928635.1|AV928635 AV928635 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd15c08 3', mRNA sequence
Length = 671
Score = 192 bits (414), Expect(2) = 2e-059
Identities = 76/111 (68%), Positives = 90/111 (81%)
Frame = -1 / -2
Query: 687 GDAEREPSVFSKITRFEEELRAVLPQXXXXXXXXXXEGTAPVANRIADSRSFPLYRFVRE 508
G+AE E +VFSKI +FEEELR+ LP+ GTAP+ N I +SRSFPLYRFVRE
Sbjct: 577 GEAESEATVFSKINKFEEELRSALPREIEAARVAFENGTAPIPNLIKESRSFPLYRFVRE 398
Query: 507 ELGCVFLTGERLKSPGEECNKVFVGISQGKLVDPMLECLKEWDGKPLPINI 355
ELGCV+LTGE+L SPGEEC KVF+GISQ KL+DPMLECLKEW+G+PLPIN+
Sbjct: 397 ELGCVYLTGEKLLSPGEECTKVFLGISQNKLIDPMLECLKEWNGEPLPINV 245
Score = 148 bits (317), Expect(2) = 8e-045
Identities = 67/108 (62%), Positives = 69/108 (63%)
Frame = +2 / +3
Query: 365 GSGLPSHSLRHSSMGSTSLPWLMPTNTLLHSSPGDLSLSPVRNTQPSSSRTKRYSGNDRL 544
G G P HSLRHSSMGS SL WLMP TL+HSSPGD S SPVR TQPSSSRTKRYSGND L
Sbjct: 255 GRGSPFHSLRHSSMGSMSLFWLMPRKTLVHSSPGDSSFSPVRYTQPSSSRTKRYSGNDLL 434
Query: 545 SAIRFATGAVPXXXXXXXXXXXXXXXXXXXXXNLVILENTEGSRSASP 688
S IR GAVP NL+ILENT S SASP
Sbjct: 435 SLIRLGMGAVPFSKATRAASISRGRADRSSSSNLLILENTVASLSASP 578
Score = 57.9 bits (120), Expect(2) = 2e-059
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = -1 / -2
Query: 774 FTYAEDAASGSLPLMQKVRAVLVDHALSSGDAERE 670
F+YA+DA S + PLMQK+RAVLVDHAL++G E E
Sbjct: 670 FSYADDACSANYPLMQKLRAVLVDHALTAGPGEAE 566
Score = 53.3 bits (110), Expect(2) = 8e-045
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +2 / +3
Query: 671 SRSASPLLRAWSTSTARTFCISGRLPLAASSAYVN 775
S S P +RAWSTSTAR+FCISG L L ASSA +N
Sbjct: 567 SASPGPAVRAWSTSTARSFCISG*LALHASSA*LN 671
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 443,118,889
Number of Sequences: 312970
Number of extensions: 6579952
Number of successful extensions: 76313
Number of sequences better than 1.0e-020: 231
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14417815305
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)