TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802552.2.1
(252 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF652042.1|CF652042 30-L020524-066-003-K08-SP6P MPIZ-ADI... 122 2e-027
gb|AV550661.1|AV550661 AV550661 Arabidopsis thaliana roots ... 122 2e-027
gb|CK118431.1|CK118431 217c15.p1 AtM1 Arabidopsis thaliana ... 122 2e-027
gb|CK118851.1|CK118851 215l08.p1 AtM1 Arabidopsis thaliana ... 122 2e-027
gb|CK119448.1|CK119448 212f09.p1 AtM1 Arabidopsis thaliana ... 122 2e-027
gb|CK120454.1|CK120454 218j21.p1 AtM1 Arabidopsis thaliana ... 122 2e-027
gb|CK121539.1|CK121539 202l17.p1 AtM1 Arabidopsis thaliana ... 122 2e-027
gb|M20308.1|ATHCHS A.thaliana chalcone synthase (CHS) gene,... 122 2e-027
gb|AF112086.1|AF112086 Arabidopsis thaliana chalcone syntha... 122 2e-027
gb|AY044331.1| Arabidopsis thaliana chalcone synthase (nari... 122 2e-027
gb|AY054278.1| Arabidopsis thaliana AT5g13930/MAC12_11 mRNA... 122 2e-027
gb|AY058155.1| Arabidopsis thaliana AT5g13930/MAC12_11 mRNA... 122 2e-027
gb|AY090376.1| Arabidopsis thaliana AT5g13930/MAC12_11 mRNA... 122 2e-027
gb|BT000596.1| Arabidopsis thaliana chalcone synthase (nari... 122 2e-027
emb|AX505534.1| Sequence 229 from Patent WO0216655 122 2e-027
emb|AX651363.1| Sequence 154 from Patent WO03000898 122 2e-027
gb|AY087778.1| Arabidopsis thaliana clone 38370 mRNA, compl... 122 2e-027
dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosom... 122 2e-027
gb|AY612787.1| Arabidopsis thaliana chalcone synthase (CHS)... 122 2e-027
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 122 2e-027
dbj|AB117729.1| Arabidopsis thaliana AT5G13930.1 gene for m... 122 2e-027
dbj|AB117730.1| Arabidopsis thaliana AT5G13930.1 gene for m... 122 2e-027
dbj|AB117732.1| Arabidopsis thaliana AT5G13930.1 gene for m... 122 2e-027
dbj|AB117737.1| Arabidopsis thaliana AT5G13930.1 gene for m... 122 2e-027
emb|AJ619907.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ619908.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ619909.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ619910.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ619911.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ619912.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867819.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867820.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867821.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867822.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867823.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867824.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867825.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867826.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867827.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867828.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867829.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867830.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867831.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867832.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867833.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867834.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867835.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867836.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867837.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|AJ867838.1| Arabidopsis thaliana partial chs gene for c... 122 2e-027
emb|Y18603.1|ATH18603 Arabidopsis thaliana chs gene, partia... 122 2e-027
emb|Y18602.1|ATH18602 Arabidopsis thaliana chs gene, partia... 122 2e-027
gb|DQ062385.1| Arabidopsis thaliana ecotype Ba-1 chalcone s... 122 2e-027
gb|DQ062386.1| Arabidopsis thaliana ecotype Ag-0 chalcone s... 122 2e-027
gb|DQ062387.1| Arabidopsis thaliana ecotype Bla-1 chalcone ... 122 2e-027
gb|DQ062388.1| Arabidopsis thaliana ecotype Co-1 chalcone s... 122 2e-027
gb|DQ062389.1| Arabidopsis thaliana ecotype Can-0 chalcone ... 122 2e-027
gb|DQ062390.1| Arabidopsis thaliana ecotype Cvi-0 (Cape Ver... 122 2e-027
gb|DQ062391.1| Arabidopsis thaliana ecotype Ita-0 chalcone ... 122 2e-027
gb|DQ062392.1| Arabidopsis thaliana ecotype Mt-0 chalcone s... 122 2e-027
gb|DQ062393.1| Arabidopsis thaliana ecotype Ak-1 chalcone s... 122 2e-027
gb|DQ062394.1| Arabidopsis thaliana ecotype Lip-0 chalcone ... 122 2e-027
gb|DQ062395.1| Arabidopsis thaliana ecotype Hau-0 chalcone ... 122 2e-027
gb|DQ062396.1| Arabidopsis thaliana ecotype Hi-0 chalcone s... 122 2e-027
gb|DQ062397.1| Arabidopsis thaliana ecotype Es-0 chalcone s... 122 2e-027
gb|DQ062398.1| Arabidopsis thaliana ecotype St-0 chalcone s... 122 2e-027
gb|DQ062399.1| Arabidopsis thaliana ecotype Oy-0 chalcone s... 122 2e-027
gb|DQ062400.1| Arabidopsis thaliana ecotype Litva chalcone ... 122 2e-027
gb|DQ062401.1| Arabidopsis thaliana ecotype Chi-0 chalcone ... 122 2e-027
gb|DQ062402.1| Arabidopsis thaliana ecotype En-D chalcone s... 122 2e-027
gb|DQ062403.1| Arabidopsis thaliana ecotype Rs-1 chalcone s... 122 2e-027
gb|DQ062404.1| Arabidopsis thaliana ecotype Gr-1 chalcone s... 122 2e-027
gb|DQ062405.1| Arabidopsis thaliana ecotype Bl-1 chalcone s... 122 2e-027
gb|DQ062406.1| Arabidopsis thaliana ecotype Br-0 chalcone s... 122 2e-027
gb|DQ062407.1| Arabidopsis thaliana ecotype En-T chalcone s... 122 2e-027
gb|DQ062408.1| Arabidopsis thaliana ecotype Kas-1 chalcone ... 122 2e-027
gb|DQ062409.1| Arabidopsis thaliana ecotype Pog-0 chalcone ... 122 2e-027
gb|DQ062410.1| Arabidopsis thaliana ecotype Ri-0 chalcone s... 122 2e-027
gb|DQ062411.1| Arabidopsis thaliana ecotype Van-0 chalcone ... 122 2e-027
gb|DQ062412.1| Arabidopsis thaliana ecotype Gre-0 chalcone ... 122 2e-027
gb|DQ062413.1| Arabidopsis thaliana ecotype Kin-0 chalcone ... 122 2e-027
gb|DQ062415.1| Arabidopsis thaliana ecotype Mv-0 chalcone s... 122 2e-027
gb|DQ062416.1| Arabidopsis thaliana ecotype Tsu-0 chalcone ... 122 2e-027
ref|NM_121396.2| Arabidopsis thaliana CHS (CHALCONE SYNTHAS... 122 2e-027
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 122 2e-027
dbj|AB117736.1| Arabidopsis thaliana AT5G13930.1 gene for m... 121 4e-027
gb|DQ062414.1| Arabidopsis thaliana ecotype Yo-0 chalcone s... 121 6e-027
gb|BZ287213.1|BZ287213 SALK_020583.25.75.x Arabidopsis thal... 120 1e-026
gb|AV553997.1|AV553997 AV553997 Arabidopsis thaliana roots ... 119 2e-026
dbj|AB117731.1| Arabidopsis thaliana AT5G13930.1 gene for m... 83 1e-022
>gb|CF652042.1|CF652042 30-L020524-066-003-K08-SP6P MPIZ-ADIS-066 Arabidopsis thaliana cDNA
clone MPIZp2001K083Q 5-PRIME, mRNA sequence
Length = 805
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 553 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 720
>gb|AV550661.1|AV550661 AV550661 Arabidopsis thaliana roots Columbia Arabidopsis thaliana
cDNA clone RZ115f04R 5', mRNA sequence
Length = 589
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 370 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 537
>gb|CK118431.1|CK118431 217c15.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011C15217
5-PRIME, mRNA sequence
Length = 515
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 336 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 503
>gb|CK118851.1|CK118851 215l08.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L08215
5-PRIME, mRNA sequence
Length = 498
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 163 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 330
>gb|CK119448.1|CK119448 212f09.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011F09212
5-PRIME, mRNA sequence
Length = 747
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 5 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 172
>gb|CK120454.1|CK120454 218j21.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011J21218
5-PRIME, mRNA sequence
Length = 759
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 540 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 707
>gb|CK121539.1|CK121539 202l17.p1 AtM1 Arabidopsis thaliana cDNA clone MPMGp2011L17202
5-PRIME, mRNA sequence
Length = 791
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 540 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 707
>gb|M20308.1|ATHCHS A.thaliana chalcone synthase (CHS) gene, complete cds
Length = 3864
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 2627 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2794
>gb|AF112086.1|AF112086 Arabidopsis thaliana chalcone synthase gene, complete cds
Length = 1447
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 744 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 911
>gb|AY044331.1| Arabidopsis thaliana chalcone synthase (naringenin-chalcone
synthase) (testa 4 protein) (MAC12.14) mRNA, complete
cds
Length = 1232
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 493 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 660
>gb|AY054278.1| Arabidopsis thaliana AT5g13930/MAC12_11 mRNA, complete cds
Length = 1473
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 565 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 732
>gb|AY058155.1| Arabidopsis thaliana AT5g13930/MAC12_11 mRNA, complete cds
Length = 1381
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 561 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 728
>gb|AY090376.1| Arabidopsis thaliana AT5g13930/MAC12_11 mRNA, complete cds
Length = 1473
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 565 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 732
>gb|BT000596.1| Arabidopsis thaliana chalcone synthase (naringenin-chalcone
synthase) (testa 4 protein)A (At5g13930/MAC12_11) mRNA,
complete cds
Length = 1188
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 493 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 660
>emb|AX505534.1| Sequence 229 from Patent WO0216655
Length = 1188
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 493 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 660
>emb|AX651363.1| Sequence 154 from Patent WO03000898
Length = 1188
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 493 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 660
>gb|AY087778.1| Arabidopsis thaliana clone 38370 mRNA, complete sequence
Length = 1363
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 565 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 732
>dbj|AB005230.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MAC12
Length = 74613
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 39812 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 39979
>gb|AY612787.1| Arabidopsis thaliana chalcone synthase (CHS) gene, partial cds
Length = 1388
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 714 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 881
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 4282315 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 4282482
>dbj|AB117729.1| Arabidopsis thaliana AT5G13930.1 gene for mutant protein of chalcone
synthase, allele: tt4(C2)
Length = 2459
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1325 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 1492
>dbj|AB117730.1| Arabidopsis thaliana AT5G13930.1 gene for mutant protein of chalcone
synthase, allele: tt4(C3)
Length = 2438
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1325 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 1492
>dbj|AB117732.1| Arabidopsis thaliana AT5G13930.1 gene for mutant protein of chalcone
synthase, allele: tt4(C5)
Length = 2452
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1317 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 1484
>dbj|AB117737.1| Arabidopsis thaliana AT5G13930.1 gene for mutant protein of chalcone
synthase, allele: tt4(E2)
Length = 2460
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1325 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 1492
>emb|AJ619907.1| Arabidopsis thaliana partial chs gene for chalcone synthase, exons
1-2, ecotype Mrk-0
Length = 1401
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 720 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 887
>emb|AJ619908.1| Arabidopsis thaliana partial chs gene for chalcone synthase, exons
1-2, ecotype Kas-1
Length = 1401
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 720 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 887
>emb|AJ619909.1| Arabidopsis thaliana partial chs gene for chalcone synthase, exons
1-2, ecotype Ler
Length = 1401
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 720 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 887
>emb|AJ619910.1| Arabidopsis thaliana partial chs gene for chalcone synthase, exons
1-2, ecotype Ll-0
Length = 1401
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 720 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 887
>emb|AJ619911.1| Arabidopsis thaliana partial chs gene for chalcone synthase, exons
1-2, ecotype Col-0
Length = 1401
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 720 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 887
>emb|AJ619912.1| Arabidopsis thaliana partial chs gene for chalcone synthase, exons
1-2, ecotype Lip-0
Length = 1401
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 720 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 887
>emb|AJ867819.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Yo-0
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867820.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Oy-0
Length = 2550
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1913 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2080
>emb|AJ867821.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Ei-2
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867822.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Da1-12
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867823.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Pi-0
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867824.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Cvi-0
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867825.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Can-0
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867826.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Tsu-1
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867827.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Ka-0
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867828.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Lz-0
Length = 2543
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +1
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1906 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2073
>emb|AJ867829.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Ler-0
Length = 2544
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1907 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2074
>emb|AJ867830.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Sorbo
Length = 2542
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1905 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2072
>emb|AJ867831.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Shakhdara
Length = 2542
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1905 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2072
>emb|AJ867832.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Kas-1
Length = 2542
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1905 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2072
>emb|AJ867833.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Mrk-0
Length = 2542
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1905 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2072
>emb|AJ867834.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Gue-0
Length = 2542
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1905 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2072
>emb|AJ867835.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Ws-0
Length = 2542
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1905 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2072
>emb|AJ867836.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Petergof
Length = 2542
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +3
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1905 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2072
>emb|AJ867837.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Lip-0
Length = 2550
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1913 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2080
>emb|AJ867838.1| Arabidopsis thaliana partial chs gene for chalcone synthase, promoter
and exons 1-2, ecotype Rsch-0
Length = 2550
Score = 122 bits (262), Expect = 2e-027
Identities = 51/56 (91%), Positives = 54/56 (96%)
Frame = +1 / +2
Query: 13 YQQGWFAGGTVLRVAKDLAENNRGARVLVVCSEITXVTFRGPSESHLDSLVGQALF 180
YQQG FAGGTVLR+AKDLAENNRGARVLVVCSEIT VTFRGPS++HLDSLVGQALF
Sbjct: 1913 YQQGCFAGGTVLRIAKDLAENNRGARVLVVCSEITAVTFRGPSDTHLDSLVGQALF 2080
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 239,758,681
Number of Sequences: 1013581
Number of extensions: 1981624
Number of successful extensions: 141378
Number of sequences better than 1.0e-020: 96
length of database: 302,980,290
effective HSP length: 51
effective length of database: 251,287,659
effective search space used: 8041205088
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)