BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBN21e06.xg.2.1
(704 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD374025.1|CD374025 WHE2622_G07_M14ZT Sumai3 Wheat Fusar... 184 5e-045
gb|CD905904.1|CD905904 G468.103E19R010929 G468 Triticum aes... 176 1e-042
gb|BQ619973.1|BQ619973 TaLr1141C09F TaLr1 Triticum aestivum... 157 1e-036
gb|BJ263565.1|BJ263565 BJ263565 Y. Ogihara unpublished cDNA... 133 2e-029
gb|CA484792.1|CA484792 WHE4310_G06_M12ZS Wheat meiotic anth... 131 7e-029
gb|BF200436.1|BF200436 WHE2258_A12_B24ZE Triticum monococcu... 127 1e-027
gb|CD867975.1|CD867975 AZO2.107L04F001113 AZO2 Triticum aes... 88 1e-015
gb|BJ308742.1|BJ308742 BJ308742 Y. Ogihara unpublished cDNA... 78 9e-013
gb|DR735836.1|DR735836 FGAS016879 Triticum aestivum FGAS: L... 70 2e-010
gb|CA645124.1|CA645124 wre1n.pk0087.c11 wre1n Triticum aest... 68 9e-010
gb|BE445402.1|BE445402 WHE1136_D04_H08ZS Wheat etiolated se... 58 9e-007
gb|BG604505.1|BG604505 WHE0834_E01_I02ZS Wheat vernalized c... 58 9e-007
gb|BJ218161.1|BJ218161 BJ218161 Y. Ogihara unpublished cDNA... 58 9e-007
gb|BJ306754.1|BJ306754 BJ306754 Y. Ogihara unpublished cDNA... 58 9e-007
gb|BJ321866.1|BJ321866 BJ321866 Y. Ogihara unpublished cDNA... 58 9e-007
gb|CA608442.1|CA608442 wr1.pk0088.c8 wr1 Triticum aestivum ... 58 9e-007
gb|CA627543.1|CA627543 wdr1.pk0002.c6 wdr1 Triticum aestivu... 58 9e-007
gb|CD884224.1|CD884224 F1.115P05R010628 F1 Triticum aestivu... 54 1e-005
gb|BE492089.1|BE492089 WHE0551_D10_D10ZE Triticum monococcu... 42 0.051
gb|BJ302888.1|BJ302888 BJ302888 Y. Ogihara unpublished cDNA... 42 0.051
gb|BJ322436.1|BJ322436 BJ322436 Y. Ogihara unpublished cDNA... 42 0.051
gb|BJ308775.1|BJ308775 BJ308775 Y. Ogihara unpublished cDNA... 40 0.20
gb|BJ308919.1|BJ308919 BJ308919 Y. Ogihara unpublished cDNA... 40 0.20
gb|CA639595.1|CA639595 wre1n.pk0024.h4 wre1n Triticum aesti... 40 0.20
>gb|CD374025.1|CD374025 WHE2622_G07_M14ZT Sumai3 Wheat Fusarium graminearum infected spike
cDNA library Triticum aestivum cDNA clone
WHE2622_G07_M14, mRNA sequence
Length = 676
Score = 184 bits (93), Expect = 5e-045
Identities = 285/349 (81%)
Strand = Plus / Minus
Query: 138 ttgacaatgttctgggaccatcaagacgctgtcttgtgctgctctttcaaggaaaagcct 197
|||| |||| ||||||| ||| |||| ||| | |||||||| ||||||||||||||||||
Sbjct: 581 ttgagaatgctctgggatcatgaagatgctattttgtgctgttctttcaaggaaaagcct 522
Query: 198 gtgtttactttcggcaaccagatgggagttgacatgttagaaacgactttagtcgctctg 257
|| ||||| || | ||| |||||||| || ||||||| ||||| |||| || || ||
Sbjct: 521 gtatttacgtttgcaaacgagatgggaattaacatgttggaaacatctttcgttgccctt 462
Query: 258 caagatctcacccttgacaagatctctgacgagcctggtagaaaggcactacatgcggag 317
||||||||| | | |||||||| | ||| || ||||||||||||||||| | | |||
Sbjct: 461 caagatctctcgttggacaagatatttgatgaagctggtagaaaggcactatactccgag 402
Query: 318 gttccgaaactgatggaacagggctatgcgtacctgccggctggggtgtgcctgtctggg 377
| || || |||||||| ||||||| || |||||||| | ||| |||||| ||||||||
Sbjct: 401 atcccaaagctgatggagcagggctttgtttacctgccaggtggtgtgtgcttgtctggg 342
Query: 378 atgggccgccatgtctcctacgagcaagctgttgcttggaaagttctcggtgaggacggc 437
||||||||||||||||| | ||| | ||||| || |||||||| | ||||||||| |
Sbjct: 341 atgggccgccatgtctcatttgagaatgctgtagcatggaaagtagttggtgaggacaac 282
Query: 438 aacgtgcactgcctcgccttctgtttcgtcaactggtccttcgtctgat 486
|| |||||||||||||||||||| |||||||||||||| ||||| ||||
Sbjct: 281 aatgtgcactgcctcgccttctgcttcgtcaactggtctttcgtgtgat 233
>gb|CD905904.1|CD905904 G468.103E19R010929 G468 Triticum aestivum cDNA clone G468103E19,
mRNA sequence
Length = 643
Score = 176 bits (89), Expect = 1e-042
Identities = 275/337 (81%)
Strand = Plus / Minus
Query: 150 tgggaccatcaagacgctgtcttgtgctgctctttcaaggaaaagcctgtgtttactttc 209
||||| ||| |||| ||| | |||||||| |||||||||||||||||||| ||||| ||
Sbjct: 638 tgggatcatgaagatgctattttgtgctgttctttcaaggaaaagcctgtatttacgttt 579
Query: 210 ggcaaccagatgggagttgacatgttagaaacgactttagtcgctctgcaagatctcacc 269
| ||| |||||||| || ||||||| ||||| |||| || || || ||||||||| |
Sbjct: 578 gcaaacgagatgggaattaacatgttggaaacatctttcgttgcccttcaagatctctcg 519
Query: 270 cttgacaagatctctgacgagcctggtagaaaggcactacatgcggaggttccgaaactg 329
| |||||||| | ||| || ||||||||||||||||| | | ||| | || || ||
Sbjct: 518 ttggacaagatatttgatgaagctggtagaaaggcactatactccgagatcccaaagttg 459
Query: 330 atggaacagggctatgcgtacctgccggctggggtgtgcctgtctgggatgggccgccat 389
||||| ||||||| || |||||||| | ||| |||||| ||||||||||||||||||||
Sbjct: 458 atggagcagggctttgtttacctgccaggtggtgtgtgcttgtctgggatgggccgccat 399
Query: 390 gtctcctacgagcaagctgttgcttggaaagttctcggtgaggacggcaacgtgcactgc 449
||||| | ||| | ||||| || |||||||| | ||||||||| |||||||||||||
Sbjct: 398 gtctcatttgagaatgctgtagcatggaaagtagttggtgaggacaacaacgtgcactgc 339
Query: 450 ctcgccttctgtttcgtcaactggtccttcgtctgat 486
||||||||||| |||||||||||||| ||||| ||||
Sbjct: 338 ctcgccttctgcttcgtcaactggtctttcgtgtgat 302
>gb|BQ619973.1|BQ619973 TaLr1141C09F TaLr1 Triticum aestivum cDNA clone TaLr1141C09F, mRNA
sequence
Length = 649
Score = 157 bits (79), Expect = 1e-036
Identities = 247/303 (81%)
Strand = Plus / Minus
Query: 184 tcaaggaaaagcctgtgtttactttcggcaaccagatgggagttgacatgttagaaacga 243
|||||||||||||||| ||||| || | ||| |||||||| || ||||||| |||||
Sbjct: 649 tcaaggaaaagcctgtatttacgtttgcaaacgagatgggaattaacatgttggaaacat 590
Query: 244 ctttagtcgctctgcaagatctcacccttgacaagatctctgacgagcctggtagaaagg 303
|||| || || || ||||||||| | | |||||||| | ||| || ||||||||||||
Sbjct: 589 ctttcgttgcccttcaagatctctcgttggacaagatatttgatgaagctggtagaaagg 530
Query: 304 cactacatgcggaggttccgaaactgatggaacagggctatgcgtacctgccggctgggg 363
||||| | | ||| | || || ||||||| ||||||| || |||||||| | ||| |
Sbjct: 529 cactatactccgagatcccaaagttgatggagcagggctttgtttacctgccaggtggtg 470
Query: 364 tgtgcctgtctgggatgggccgccatgtctcctacgagcaagctgttgcttggaaagttc 423
||||| ||||||||||||||||||||||||| | ||| | ||||| || ||||||||
Sbjct: 469 tgtgcttgtctgggatgggccgccatgtctcatttgagaatgctgtagcatggaaagtag 410
Query: 424 tcggtgaggacggcaacgtgcactgcctcgccttctgtttcgtcaactggtccttcgtct 483
| ||||||||| |||||||||||||||||||||||| |||||||||||||| ||||| |
Sbjct: 409 ttggtgaggacaacaacgtgcactgcctcgccttctgcttcgtcaactggtctttcgtgt 350
Query: 484 gat 486
|||
Sbjct: 349 gat 347
>gb|BJ263565.1|BJ263565 BJ263565 Y. Ogihara unpublished cDNA library, Wh_h Triticum
aestivum cDNA clone whh5d05 3', mRNA sequence
Length = 599
Score = 133 bits (67), Expect = 2e-029
Identities = 136/159 (85%)
Strand = Plus / Minus
Query: 328 tgatggaacagggctatgcgtacctgccggctggggtgtgcctgtctgggatgggccgcc 387
||||||| ||||||| || |||||||| | ||| |||||| ||||||||||||||||||
Sbjct: 574 tgatggagcagggctttgtttacctgccaggtggtgtgtgcttgtctgggatgggccgcc 515
Query: 388 atgtctcctacgagcaagctgttgcttggaaagttctcggtgaggacggcaacgtgcact 447
||||||| | ||| | ||||| || |||||||| | ||||||||| |||||||||||
Sbjct: 514 atgtctcatttgagaatgctgtagcatggaaagtagttggtgaggacaacaacgtgcact 455
Query: 448 gcctcgccttctgtttcgtcaactggtccttcgtctgat 486
||||||||||||| |||||||||||||| ||||| ||||
Sbjct: 454 gcctcgccttctgcttcgtcaactggtctttcgtgtgat 416
>gb|CA484792.1|CA484792 WHE4310_G06_M12ZS Wheat meiotic anther cDNA library Triticum
aestivum cDNA clone WHE4310_G06_M12, mRNA sequence
Length = 742
Score = 131 bits (66), Expect = 7e-029
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 324 aaactgatggaacagggctatgcgtacctgccggctggggtgtgcctgtctgggatgggc 383
||||| |||||||||||||| || |||||||| | || |||||| |||| || |||||
Sbjct: 174 aaactaatggaacagggctacgcatacctgccatcaggtgtgtgcatgtcaggaatgggt 233
Query: 384 cgccatgtctcctacgagcaagctgttgcttggaaagttctcggtgaggacggcaacgtg 443
|||||||| || | ||| |||||||| || ||||| || |||||||||||| ||||||||
Sbjct: 234 cgccatgtttctttcgaccaagctgtggcgtggaaggtgctcggtgaggacagcaacgtg 293
Query: 444 cactgcctcgccttctgtttcgtcaactggtccttcgt 481
|||||||| || ||||| ||||||||||||||||||||
Sbjct: 294 cactgcctggcattctgcttcgtcaactggtccttcgt 331
Score = 44.1 bits (22), Expect = 0.013
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 156 catcaagacgctgtcttgtgctgctctttcaaggaaaagcctgtgtttac 205
|||| ||||||||| ||||||||||||| ||||| || ||| |||||||
Sbjct: 6 catccagacgctgttctgtgctgctcttttaaggagaaacctatgtttac 55
>gb|BF200436.1|BF200436 WHE2258_A12_B24ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE2258_A12_B24, mRNA
sequence
Length = 458
Score = 127 bits (64), Expect = 1e-027
Identities = 136/160 (85%)
Strand = Plus / Plus
Query: 327 ctgatggaacagggctatgcgtacctgccggctggggtgtgcctgtctgggatgggccgc 386
|||||||| ||||||| || |||||||| | ||| |||||| |||||||||||||||||
Sbjct: 59 ctgatggagcagggctttgtttacctgccaggtggtgtgtgcttgtctgggatgggccgc 118
Query: 387 catgtctcctacgagcaagctgttgcttggaaagttctcggtgaggacggcaacgtgcac 446
|||||||| | ||| | ||||| || |||||||| | ||||||||| ||| ||||||
Sbjct: 119 catgtctcatttgagaatgctgtagcatggaaagtagttggtgaggacaacaatgtgcac 178
Query: 447 tgcctcgccttctgtttcgtcaactggtccttcgtctgat 486
|||||||||||||| |||||||||||||| ||||| ||||
Sbjct: 179 tgcctcgccttctgcttcgtcaactggtctttcgtgtgat 218
>gb|CD867975.1|CD867975 AZO2.107L04F001113 AZO2 Triticum aestivum cDNA clone AZO2107L04,
mRNA sequence
Length = 571
Score = 87.7 bits (44), Expect = 1e-015
Identities = 125/152 (82%)
Strand = Plus / Plus
Query: 336 cagggctatgcgtacctgccggctggggtgtgcctgtctgggatgggccgccatgtctcc 395
|||||| ||| ||||||||| | || |||||| |||| ||||||||||| || || |||
Sbjct: 151 cagggccatgtgtacctgccatcaggcgtgtgcatgtcggggatgggccggcacgtgtcc 210
Query: 396 tacgagcaagctgttgcttggaaagttctcggtgaggacggcaacgtgcactgcctcgcc 455
| ||| || || || || ||||| || ||||| |||||| ||| ||| |||||||| |||
Sbjct: 211 ttcgaccaggccgtggcgtggaaggtgctcggcgaggacagcagcgtccactgcctggcc 270
Query: 456 ttctgtttcgtcaactggtccttcgtctgatg 487
|| || |||||||||||||||||||| |||||
Sbjct: 271 ttgtgcttcgtcaactggtccttcgtgtgatg 302
>gb|BJ308742.1|BJ308742 BJ308742 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd17d11 3', mRNA sequence
Length = 719
Score = 77.8 bits (39), Expect = 9e-013
Identities = 129/159 (81%)
Strand = Plus / Minus
Query: 331 tggaacagggctatgcgtacctgccggctggggtgtgcctgtctgggatgggccgccatg 390
||||| ||||| ||| ||||||||| | || |||||| |||| ||||||||||| || |
Sbjct: 299 tggaagagggccatgtgtacctgccatcaggcgtgtgcatgtcggggatgggccggcacg 240
Query: 391 tctcctacgagcaagctgttgcttggaaagttctcggtgaggacggcaacgtgcactgcc 450
| |||| ||| || || || || ||||| || ||||| |||||| || ||| |||||||
Sbjct: 239 tgtccttcgaccaggccgtggcgtggaaggtgctcggcgaggacagcggcgtccactgcc 180
Query: 451 tcgccttctgtttcgtcaactggtccttcgtctgatgtg 489
| ||| | || |||||||||||||||||||| |||||||
Sbjct: 179 tggccctgtgcttcgtcaactggtccttcgtgtgatgtg 141
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 39 cctgaagctgctacacttgttcgctggatttgccaaagcta 79
|||||||| || ||||||| ||| ||||||||||| |||||
Sbjct: 591 cctgaagcagcgacacttgctcggtggatttgccagagcta 551
>gb|DR735836.1|DR735836 FGAS016879 Triticum aestivum FGAS: Library 5 GATE 7 Triticum
aestivum cDNA, mRNA sequence
Length = 1018
Score = 69.9 bits (35), Expect = 2e-010
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 414 tggaaagttctcggtgaggacggcaacgtgcactgcctcgccttctgtttcgtcaactgg 473
||||| || ||||| |||||| ||| ||| |||||||| ||||| || ||||||||||||
Sbjct: 254 tggaaggtgctcggcgaggacagcagcgtccactgcctggccttgtgcttcgtcaactgg 195
Query: 474 tccttcgtctgatgt 488
|||||||| ||||||
Sbjct: 194 tccttcgtgtgatgt 180
>gb|CA645124.1|CA645124 wre1n.pk0087.c11 wre1n Triticum aestivum cDNA clone
wre1n.pk0087.c11 5' end, mRNA sequence
Length = 293
Score = 67.9 bits (34), Expect = 9e-010
Identities = 94/114 (82%)
Strand = Plus / Plus
Query: 375 gggatgggccgccatgtctcctacgagcaagctgttgcttggaaagttctcggtgaggac 434
||||||||||| || || |||| ||| || || || || ||||| || ||||| ||||||
Sbjct: 3 gggatgggccggcacgtgtccttcgaccaggccgtggcgtggaaggtgctcggcgaggac 62
Query: 435 ggcaacgtgcactgcctcgccttctgtttcgtcaactggtccttcgtctgatgt 488
||| || |||||||| ||||| || |||||||||||||||||||| ||||||
Sbjct: 63 agcagggtccactgcctggccttgtgcttcgtcaactggtccttcgtgtgatgt 116
>gb|BE445402.1|BE445402 WHE1136_D04_H08ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1136_D04_H08,
mRNA sequence
Length = 329
Score = 58.0 bits (29), Expect = 9e-007
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 443 gcactgcctcgccttctgtttcgtcaactggtccttcgtct 483
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 162 gcactgcctcgccttcatgttcgtcaactggtccttcgtct 122
>gb|BG604505.1|BG604505 WHE0834_E01_I02ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0834_E01_I02, mRNA sequence
Length = 550
Score = 58.0 bits (29), Expect = 9e-007
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 443 gcactgcctcgccttctgtttcgtcaactggtccttcgtct 483
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 366 gcactgcctcgccttcatgttcgtcaactggtccttcgtct 406
>gb|BJ218161.1|BJ218161 BJ218161 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh36f11 3', mRNA sequence
Length = 636
Score = 58.0 bits (29), Expect = 9e-007
Identities = 41/45 (91%)
Strand = Plus / Minus
Query: 444 cactgcctcgccttctgtttcgtcaactggtccttcgtctgatgt 488
|||||||| ||||| || |||||||||||||||||||| ||||||
Sbjct: 630 cactgcctggccttgtgcttcgtcaactggtccttcgtgtgatgt 586
>gb|BJ306754.1|BJ306754 BJ306754 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd5c13 3', mRNA sequence
Length = 669
Score = 58.0 bits (29), Expect = 9e-007
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 443 gcactgcctcgccttctgtttcgtcaactggtccttcgtct 483
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 213 gcactgcctcgccttcatgttcgtcaactggtccttcgtct 173
>gb|BJ321866.1|BJ321866 BJ321866 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf22l02 3', mRNA sequence
Length = 653
Score = 58.0 bits (29), Expect = 9e-007
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 443 gcactgcctcgccttctgtttcgtcaactggtccttcgtct 483
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 213 gcactgcctcgccttcatgttcgtcaactggtccttcgtct 173
>gb|CA608442.1|CA608442 wr1.pk0088.c8 wr1 Triticum aestivum cDNA clone wr1.pk0088.c8 5'
end, mRNA sequence
Length = 508
Score = 58.0 bits (29), Expect = 9e-007
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 443 gcactgcctcgccttctgtttcgtcaactggtccttcgtct 483
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 332 gcactgcctcgccttcatgttcgtcaactggtccttcgtct 372
>gb|CA627543.1|CA627543 wdr1.pk0002.c6 wdr1 Triticum aestivum cDNA clone wdr1.pk0002.c6 5'
end, mRNA sequence
Length = 526
Score = 58.0 bits (29), Expect = 9e-007
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 443 gcactgcctcgccttctgtttcgtcaactggtccttcgtct 483
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 359 gcactgcctcgccttcatgttcgtcaactggtccttcgtct 399
>gb|CD884224.1|CD884224 F1.115P05R010628 F1 Triticum aestivum cDNA clone F1115P05, mRNA
sequence
Length = 424
Score = 54.0 bits (27), Expect = 1e-005
Identities = 43/47 (91%), Gaps = 1/47 (2%)
Strand = Plus / Minus
Query: 441 gtgcactgcctcgccttctgtttc-gtcaactggtccttcgtctgat 486
|||||||||||||||||||| ||| ||||||||||| ||||| ||||
Sbjct: 392 gtgcactgcctcgccttctgcttcggtcaactggtctttcgtgtgat 346
>gb|BE492089.1|BE492089 WHE0551_D10_D10ZE Triticum monococcum vegetative apex cDNA library
Triticum monococcum cDNA clone WHE0551_D10_D10, mRNA
sequence
Length = 506
Score = 42.1 bits (21), Expect = 0.051
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 443 gcactgcctcgccttctgtttcgtcaactggtccttc 479
|||||||||||||||| |||||||||||| |||||
Sbjct: 217 gcactgcctcgccttcatgttcgtcaactggaccttc 253
>gb|BJ302888.1|BJ302888 BJ302888 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd17d11 5', mRNA sequence
Length = 560
Score = 42.1 bits (21), Expect = 0.051
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 39 cctgaagctgctacacttgttcgctggatttgccaaagcta 79
|||||||| || ||||||| ||| ||||||||||| |||||
Sbjct: 326 cctgaagcagcgacacttgctcggtggatttgccagagcta 366
>gb|BJ322436.1|BJ322436 BJ322436 Y. Ogihara unpublished cDNA library, Wh_yf Triticum
aestivum cDNA clone whyf25e04 3', mRNA sequence
Length = 647
Score = 42.1 bits (21), Expect = 0.051
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 443 gcactgcctcgccttctgtttcgtcaactggtccttc 479
|||||||||||||||| |||||||||||| |||||
Sbjct: 242 gcactgcctcgccttcatgttcgtcaactggaccttc 206
>gb|BJ308775.1|BJ308775 BJ308775 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd17f20 3', mRNA sequence
Length = 645
Score = 40.1 bits (20), Expect = 0.20
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 444 cactgcctcgccttctgtttcgtcaactggtccttc 479
||||||||||||||| |||||||||||| |||||
Sbjct: 270 cactgcctcgccttcatgttcgtcaactggaccttc 235
>gb|BJ308919.1|BJ308919 BJ308919 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd18a04 3', mRNA sequence
Length = 650
Score = 40.1 bits (20), Expect = 0.20
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 444 cactgcctcgccttctgtttcgtcaactggtccttc 479
||||||||||||||| |||||||||||| |||||
Sbjct: 271 cactgcctcgccttcatgttcgtcaactggaccttc 236
>gb|CA639595.1|CA639595 wre1n.pk0024.h4 wre1n Triticum aestivum cDNA clone wre1n.pk0024.h4
5' end, mRNA sequence
Length = 357
Score = 40.1 bits (20), Expect = 0.20
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 444 cactgcctcgccttctgtttcgtcaactggtccttc 479
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Sbjct: 27 cactgcctcgccttcatgttcgtcaactggaccttc 62
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 120,430
Number of Sequences: 636343
Number of extensions: 120430
Number of successful extensions: 32378
Number of sequences better than 0.5: 24
Number of HSP's better than 0.5 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32337
Number of HSP's gapped (non-prelim): 39
length of query: 704
length of database: 367,240,239
effective HSP length: 19
effective length of query: 685
effective length of database: 355,149,722
effective search space: 243277559570
effective search space used: 243277559570
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)