BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2622915.2.1
(584 letters)
Database: Triticum_nucl_with_EST.fasta
636,343 sequences; 367,240,239 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ238982.1|BQ238982 TaE05038G07R TaE05 Triticum aestivum... 176 1e-042
gb|BQ806258.1|BQ806258 WHE3576_F08_K16ZS Wheat developing g... 176 1e-042
gb|BJ220259.1|BJ220259 BJ220259 Y. Ogihara unpublished cDNA... 176 1e-042
gb|BJ307490.1|BJ307490 BJ307490 Y. Ogihara unpublished cDNA... 176 1e-042
gb|CA632588.1|CA632588 wle1n.pk0054.a2 wle1n Triticum aesti... 176 1e-042
gb|CD894189.1|CD894189 G118.125J15R011115 G118 Triticum aes... 176 1e-042
gb|CD935752.1|CD935752 OV.102F17R010426 OV Triticum aestivu... 176 1e-042
gb|CK162844.1|CK162844 FGAS015444 Triticum aestivum FGAS: L... 176 1e-042
gb|CK215715.1|CK215715 FGAS027684 Triticum aestivum FGAS: L... 176 1e-042
gb|AJ612725.1|AJ612725 AJ612725 Triticum turgidum subsp. du... 176 1e-042
gb|BE591134.1|BE591134 WHE0867_G04_M07ZS Wheat 20-45 DAP sp... 168 3e-040
gb|BQ801748.1|BQ801748 WHE2818_B02_C04ZS Triticum monococcu... 168 3e-040
gb|BJ239685.1|BJ239685 BJ239685 Y. Ogihara unpublished cDNA... 168 3e-040
gb|BJ281758.1|BJ281758 BJ281758 Y. Ogihara unpublished cDNA... 168 3e-040
gb|BJ286867.1|BJ286867 BJ286867 Y. Ogihara unpublished cDNA... 168 3e-040
gb|CA599993.1|CA599993 waw1c.pk004.c14 waw1c Triticum aesti... 168 3e-040
gb|CA642633.1|CA642633 wre1n.pk0057.d11 wre1n Triticum aest... 168 3e-040
gb|CD892170.1|CD892170 G118.120C17R010926 G118 Triticum aes... 168 3e-040
gb|CD927467.1|CD927467 GR45.102D12R010608 GR45 Triticum aes... 168 3e-040
gb|CK200660.1|CK200660 FGAS009176 Triticum aestivum FGAS: L... 168 3e-040
gb|CD453499.1|CD453499 WHE0765_C06_F11ZT CS wheat heat-stre... 163 2e-038
gb|CD887739.1|CD887739 G118.106C09R010924 G118 Triticum aes... 161 7e-038
gb|DR740251.1|DR740251 FGAS085179 Triticum aestivum FGAS: L... 161 7e-038
gb|BJ281760.1|BJ281760 BJ281760 Y. Ogihara unpublished cDNA... 155 4e-036
gb|BJ275605.1|BJ275605 BJ275605 Y. Ogihara unpublished cDNA... 151 6e-035
gb|BJ286865.1|BJ286865 BJ286865 Y. Ogihara unpublished cDNA... 151 6e-035
gb|BQ238440.1|BQ238440 TaE05004B01F TaE05 Triticum aestivum... 149 3e-034
gb|BQ236077.1|BQ236077 TaE05038F12F TaE05 Triticum aestivum... 141 6e-032
gb|DR732541.1|DR732541 FGAS078461 Triticum aestivum FGAS: T... 133 1e-029
gb|DR740252.1|DR740252 FGAS085180 Triticum aestivum FGAS: L... 131 6e-029
gb|BJ253797.1|BJ253797 BJ253797 Y. Ogihara unpublished cDNA... 125 4e-027
gb|BE518051.1|BE518051 WHE0806_F12_K24ZS Wheat vernalized c... 121 6e-026
gb|BQ807205.1|BQ807205 WHE3588_A10_A20ZS Wheat developing g... 101 5e-020
gb|CA646903.1|CA646903 wre1n.pk0118.b6 wre1n Triticum aesti... 101 5e-020
gb|BE445679.1|BE445679 WHE1452_F02_K04ZS Wheat etiolated se... 76 3e-012
gb|BJ254078.1|BJ254078 BJ254078 Y. Ogihara unpublished cDNA... 72 5e-011
gb|CF134081.1|CF134081 WHE4367_E04_I07ZT Wheat meiotic flor... 62 5e-008
gb|CK193804.1|CK193804 FGAS002221 Triticum aestivum FGAS: L... 46 0.003
gb|BQ238988.1|BQ238988 TaE05038F12R TaE05 Triticum aestivum... 42 0.042
gb|CA618261.1|CA618261 wl1n.pk0031.e9 wl1n Triticum aestivu... 42 0.042
>gb|BQ238982.1|BQ238982 TaE05038G07R TaE05 Triticum aestivum cDNA clone TaE05038G07R, mRNA
sequence
Length = 566
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 372 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 313
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 312 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 253
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 252 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 193
>gb|BQ806258.1|BQ806258 WHE3576_F08_K16ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3576_F08_K16, mRNA sequence
Length = 593
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 236 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 177
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 176 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 117
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 116 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 57
>gb|BJ220259.1|BJ220259 BJ220259 Y. Ogihara unpublished cDNA library, Wh Triticum aestivum
cDNA clone wh19c06 3', mRNA sequence
Length = 742
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 364 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 423
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 424 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 483
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 484 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 543
>gb|BJ307490.1|BJ307490 BJ307490 Y. Ogihara unpublished cDNA library, Wh_yd Triticum
aestivum cDNA clone whyd11k21 3', mRNA sequence
Length = 676
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 278 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 337
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 338 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 397
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 398 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 457
>gb|CA632588.1|CA632588 wle1n.pk0054.a2 wle1n Triticum aestivum cDNA clone wle1n.pk0054.a2
5' end, mRNA sequence
Length = 623
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 251 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 192
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 191 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 132
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 131 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 72
>gb|CD894189.1|CD894189 G118.125J15R011115 G118 Triticum aestivum cDNA clone G118125J15,
mRNA sequence
Length = 665
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 383 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 442
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 443 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 502
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 503 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 562
>gb|CD935752.1|CD935752 OV.102F17R010426 OV Triticum aestivum cDNA clone OV102F17, mRNA
sequence
Length = 653
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 326 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 385
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 386 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 445
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 446 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 505
>gb|CK162844.1|CK162844 FGAS015444 Triticum aestivum FGAS: Library 4 Gate 8 Triticum
aestivum cDNA, mRNA sequence
Length = 1060
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 797 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 738
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 737 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 678
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 677 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 618
>gb|CK215715.1|CK215715 FGAS027684 Triticum aestivum FGAS: Library 6 CAP GATE 1 Triticum
aestivum cDNA, mRNA sequence
Length = 748
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 466 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 525
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 526 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 585
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 586 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 645
>gb|AJ612725.1|AJ612725 AJ612725 Triticum turgidum subsp. durum etiolated seedling 20 day
Triticum turgidum subsp. durum cDNA clone 07491R, mRNA
sequence
Length = 660
Score = 176 bits (89), Expect = 1e-042
Identities = 157/180 (87%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 377 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 318
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 317 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 258
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 257 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 198
>gb|BE591134.1|BE591134 WHE0867_G04_M07ZS Wheat 20-45 DAP spike cDNA library Triticum
aestivum cDNA clone WHE0867_G04_M07, mRNA sequence
Length = 368
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 329 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 270
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 269 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 210
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 209 ggaagtgatatcccctgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 150
>gb|BQ801748.1|BQ801748 WHE2818_B02_C04ZS Triticum monococcum vernalized apex cDNA library
Triticum monococcum cDNA clone WHE2818_B02_C04, mRNA
sequence
Length = 729
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 593 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 534
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 533 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 474
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 473 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 414
>gb|BJ239685.1|BJ239685 BJ239685 Y. Ogihara unpublished cDNA library, Wh_e Triticum
aestivum cDNA clone whe7f22 3', mRNA sequence
Length = 730
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 351 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 410
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 411 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 470
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 471 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 530
>gb|BJ281758.1|BJ281758 BJ281758 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j19 5', mRNA sequence
Length = 584
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 206 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 147
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 146 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 87
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 86 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 27
>gb|BJ286867.1|BJ286867 BJ286867 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j21 3', mRNA sequence
Length = 551
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 357 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 416
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 417 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 476
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 477 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 536
>gb|CA599993.1|CA599993 waw1c.pk004.c14 waw1c Triticum aestivum cDNA clone waw1c.pk004.c14
5' end, mRNA sequence
Length = 649
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 358 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 299
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 298 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 239
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 238 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 179
>gb|CA642633.1|CA642633 wre1n.pk0057.d11 wre1n Triticum aestivum cDNA clone
wre1n.pk0057.d11 5' end, mRNA sequence
Length = 535
Score = 168 bits (85), Expect = 3e-040
Identities = 157/180 (87%), Gaps = 1/180 (0%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 403 accagtccatgtaaacaaa-gtagaggcgtagtttcctgacttggtgtacagcacacgat 345
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 344 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 285
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 284 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 225
>gb|CD892170.1|CD892170 G118.120C17R010926 G118 Triticum aestivum cDNA clone G118120C17,
mRNA sequence
Length = 629
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 362 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtaaagcacacgat 421
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| ||| |||| |||||||||||||| |
Sbjct: 422 gatggtagtcatggaagtcagagcctccatacagtggccggaagtttgatgggctccaag 481
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 482 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 541
>gb|CD927467.1|CD927467 GR45.102D12R010608 GR45 Triticum aestivum cDNA clone GR45102D12,
mRNA sequence
Length = 578
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 373 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 432
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 433 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 492
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || | |||||||||||
Sbjct: 493 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaagcatccacagcc 552
>gb|CK200660.1|CK200660 FGAS009176 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 818
Score = 168 bits (85), Expect = 3e-040
Identities = 156/180 (86%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 623 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 564
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 563 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 504
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 503 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 444
>gb|CD453499.1|CD453499 WHE0765_C06_F11ZT CS wheat heat-stressed seedling cDNA library
Triticum aestivum cDNA clone WHE0765_C06_F11, mRNA
sequence
Length = 512
Score = 163 bits (82), Expect = 2e-038
Identities = 135/153 (88%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 357 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 416
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 417 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 476
Query: 525 ggaagngatagccggtgtgagcttcaacagtct 557
||||| |||| || ||||||||||||| ||||
Sbjct: 477 ggaagtgatatccactgtgagcttcaaccgtct 509
>gb|CD887739.1|CD887739 G118.106C09R010924 G118 Triticum aestivum cDNA clone G118106C09,
mRNA sequence
Length = 578
Score = 161 bits (81), Expect = 7e-038
Identities = 131/148 (88%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 429 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 488
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 489 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 548
Query: 525 ggaagngatagccggtgtgagcttcaac 552
||||| |||| || |||||||||||||
Sbjct: 549 ggaagtgatatccactgtgagcttcaac 576
>gb|DR740251.1|DR740251 FGAS085179 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1127
Score = 161 bits (81), Expect = 7e-038
Identities = 156/180 (86%), Gaps = 1/180 (0%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 877 accagtccatgtaaacaaa-gtagaggcgtagttccctgacttggtgtagagcacacgat 819
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 818 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 759
Query: 525 ggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||| |||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 758 ggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 699
>gb|BJ281760.1|BJ281760 BJ281760 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j21 5', mRNA sequence
Length = 570
Score = 155 bits (78), Expect = 4e-036
Identities = 134/153 (87%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 195 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 136
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 135 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 76
Query: 525 ggaagngatagccggtgtgagcttcaacagtct 557
||||| |||| || ||||||||||||| ||||
Sbjct: 75 ggaagtgatatccactgtgagcttcaaccgtct 43
>gb|BJ275605.1|BJ275605 BJ275605 Y. Ogihara unpublished cDNA library, Wh_oh Triticum
aestivum cDNA clone whoh8l09 3', mRNA sequence
Length = 513
Score = 151 bits (76), Expect = 6e-035
Identities = 126/143 (88%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 371 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 430
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 431 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 490
Query: 525 ggaagngatagccggtgtgagct 547
||||| |||| || ||||||||
Sbjct: 491 ggaagtgatatccactgtgagct 513
>gb|BJ286865.1|BJ286865 BJ286865 Y. Ogihara unpublished cDNA library, Wh_r Triticum
aestivum cDNA clone whr23j19 3', mRNA sequence
Length = 472
Score = 151 bits (76), Expect = 6e-035
Identities = 129/147 (87%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 326 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 385
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
|||| |||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 386 gatgatagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 445
Query: 525 ggaagngatagccggtgtgagcttcaa 551
||||| |||| || ||||||||||||
Sbjct: 446 ggaagtgatatccactgtgagcttcaa 472
>gb|BQ238440.1|BQ238440 TaE05004B01F TaE05 Triticum aestivum cDNA clone TaE05004B01F, mRNA
sequence
Length = 523
Score = 149 bits (75), Expect = 3e-034
Identities = 116/130 (89%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 388 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 447
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||||| |
Sbjct: 448 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaag 507
Query: 525 ggaagngata 534
||||| ||||
Sbjct: 508 ggaagtgata 517
>gb|BQ236077.1|BQ236077 TaE05038F12F TaE05 Triticum aestivum cDNA clone TaE05038F12F, mRNA
sequence
Length = 443
Score = 141 bits (71), Expect = 6e-032
Identities = 115/130 (88%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 308 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 367
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatg 524
||||||||||||||||||| |||| || ||||| |||||||| |||||||||||||| |
Sbjct: 368 gatggtagtcatggaagtcaaagcctccatacagtggcaggaagtttgatgggctccaag 427
Query: 525 ggaagngata 534
||||| ||||
Sbjct: 428 ggaagtgata 437
>gb|DR732541.1|DR732541 FGAS078461 Triticum aestivum FGAS: TaLt5 Triticum aestivum cDNA,
mRNA sequence
Length = 893
Score = 133 bits (67), Expect = 1e-029
Identities = 103/115 (89%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 580 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 639
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggct 519
||||||||||||||||||| ||||| || ||||| |||||||| |||||||||||
Sbjct: 640 gatggtagtcatggaagtcagagcctccatacagtggcaggaagtttgatgggct 694
>gb|DR740252.1|DR740252 FGAS085180 Triticum aestivum FGAS: Library 2 Gate 3 Triticum
aestivum cDNA, mRNA sequence
Length = 1119
Score = 131 bits (66), Expect = 6e-029
Identities = 154/181 (85%), Gaps = 2/181 (1%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||| |||||||||| ||||| ||||| || |
Sbjct: 878 accagtccatgtaaacaaaagtagaggcgtaggtccctgacttggtgtagagcacacgat 819
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttgat-gggctccat 523
|||| |||||||||||||| ||||| || ||||| |||||| || ||||| ||||||||
Sbjct: 818 gatgatagtcatggaagtcagagcctccatacagtggcagg-aagttgatggggctccaa 760
Query: 524 gggaagngatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagc 583
|||||| |||| || ||||||||||||| |||| || ||||| || ||||||||||||
Sbjct: 759 gggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagc 700
Query: 584 c 584
|
Sbjct: 699 c 699
>gb|BJ253797.1|BJ253797 BJ253797 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf3f07 3', mRNA sequence
Length = 568
Score = 125 bits (63), Expect = 4e-027
Identities = 106/119 (89%), Gaps = 1/119 (0%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| ||||| |||||||| ||||||||||| || |
Sbjct: 420 accagtccatgtaaacaaaagtagaggcgtagtttcctgacttggtgtacagcacacgat 479
Query: 465 gatggtagtcatggaagtccgagccaccgtacaggggcaggaa-atttgatgggctcca 522
||||||||||||||||||| ||||| || ||||| |||||||| ||||||||||||||
Sbjct: 480 gatggtagtcatggaagtcagagcctccatacagtggcaggaagttttgatgggctcca 538
>gb|BE518051.1|BE518051 WHE0806_F12_K24ZS Wheat vernalized crown cDNA library Triticum
aestivum cDNA clone WHE0806_F12_K24, mRNA sequence
Length = 546
Score = 121 bits (61), Expect = 6e-026
Identities = 114/132 (86%)
Strand = Plus / Minus
Query: 453 acagcactcggtgatggtagtcatggaagtccgagccaccgtacaggggcaggaaatttg 512
||||||| || |||||||||||||||||||| ||||| || ||||| |||||||| ||||
Sbjct: 546 acagcacacgatgatggtagtcatggaagtcagagcctccatacagtggcaggaagtttg 487
Query: 513 atgggctccatgggaagngatagccggtgtgagcttcaacagtcttcaatacccttaaca 572
|||||||||| |||||| |||| || ||||||||||||| |||| || ||||| || |
Sbjct: 486 atgggctccaagggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaaaa 427
Query: 573 ccatccacagcc 584
||||||||||||
Sbjct: 426 ccatccacagcc 415
>gb|BQ807205.1|BQ807205 WHE3588_A10_A20ZS Wheat developing grains cDNA library Triticum
aestivum cDNA clone WHE3588_A10_A20, mRNA sequence
Length = 779
Score = 101 bits (51), Expect = 5e-020
Identities = 98/114 (85%)
Strand = Plus / Minus
Query: 471 agtcatggaagtccgagccaccgtacaggggcaggaaatttgatgggctccatgggaagn 530
||||||||||||| ||||| || ||||| |||||||| |||||||||||||| ||||||
Sbjct: 779 agtcatggaagtcagagcctccatacagtggcaggaagtttgatgggctccaagggaagt 720
Query: 531 gatagccggtgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
|||| || ||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 719 gatatccactgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 666
>gb|CA646903.1|CA646903 wre1n.pk0118.b6 wre1n Triticum aestivum cDNA clone wre1n.pk0118.b6
5' end, mRNA sequence
Length = 506
Score = 101 bits (51), Expect = 5e-020
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||||||||||||||||||| || ||||| |||||||||||||| ||||| ||||| || |
Sbjct: 80 accagtccatgtaaacaaaagtagaggcgtagttccctgacttggtgtagagcacacgat 21
Query: 465 gatggtagtcatggaagtc 483
|||||||||||||||||||
Sbjct: 20 gatggtagtcatggaagtc 2
>gb|BE445679.1|BE445679 WHE1452_F02_K04ZS Wheat etiolated seedling root normalized cDNA
library Triticum aestivum cDNA clone WHE1452_F02_K04,
mRNA sequence
Length = 172
Score = 75.8 bits (38), Expect = 3e-012
Identities = 73/85 (85%)
Strand = Plus / Minus
Query: 500 ggcaggaaatttgatgggctccatgggaagngatagccggtgtgagcttcaacagtcttc 559
|||||||| |||||||||||||| |||||| |||| || ||||||||||||| ||||
Sbjct: 168 ggcaggaagtttgatgggctccaagggaagtgatatccactgtgagcttcaaccgtctct 109
Query: 560 aatacccttaacaccatccacagcc 584
|| ||||| || |||||||||||||
Sbjct: 108 aacaccctcaaaaccatccacagcc 84
>gb|BJ254078.1|BJ254078 BJ254078 Y. Ogihara unpublished cDNA library, Wh_f Triticum
aestivum cDNA clone whf4f07 3', mRNA sequence
Length = 381
Score = 71.9 bits (36), Expect = 5e-011
Identities = 61/70 (87%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactttgtgtacagcactcggt 464
||| ||||||||||||||| || ||||| || || |||||||| ||||||||||| || |
Sbjct: 312 accngtccatgtaaacaaaagtagaggcgtantttcctgacttggtgtacagcacacgat 371
Query: 465 gatggtagtc 474
||||||||||
Sbjct: 372 gatggtagtc 381
>gb|CF134081.1|CF134081 WHE4367_E04_I07ZT Wheat meiotic floret cDNA library Triticum
aestivum cDNA clone WHE4367_E04_I07, mRNA sequence
Length = 741
Score = 61.9 bits (31), Expect = 5e-008
Identities = 63/74 (85%)
Strand = Plus / Minus
Query: 511 tgatgggctccatgggaagngatagccggtgtgagcttcaacagtcttcaatacccttaa 570
|||||||||||| |||||| |||| || ||||||||||||| |||| || ||||| ||
Sbjct: 741 tgatgggctccaagggaagtgatatccactgtgagcttcaaccgtctctaacaccctcaa 682
Query: 571 caccatccacagcc 584
|||||||||||||
Sbjct: 681 aaccatccacagcc 668
>gb|CK193804.1|CK193804 FGAS002221 Triticum aestivum FGAS: Library 3 Gate 6 Triticum
aestivum cDNA, mRNA sequence
Length = 833
Score = 46.1 bits (23), Expect = 0.003
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 405 accagtccatgtaaacaaatgtcgaggcatagttccctgactt 447
||||||||||||||||||| || ||||| | ||||| ||||||
Sbjct: 526 accagtccatgtaaacaaaagttgaggcgttgttccttgactt 568
>gb|BQ238988.1|BQ238988 TaE05038F12R TaE05 Triticum aestivum cDNA clone TaE05038F12R, mRNA
sequence
Length = 210
Score = 42.1 bits (21), Expect = 0.042
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 540 tgtgagcttcaacagtcttcaatacccttaacaccatccacagcc 584
||||||||||||| |||| || ||||| || |||||||||||||
Sbjct: 194 tgtgagcttcaaccgtctctaacaccctcaaaaccatccacagcc 150
>gb|CA618261.1|CA618261 wl1n.pk0031.e9 wl1n Triticum aestivum cDNA clone wl1n.pk0031.e9 5'
end, mRNA sequence
Length = 534
Score = 42.1 bits (21), Expect = 0.042
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 463 gtgatggtagtcatggaagtccgagccaccgta 495
|||||||||||| ||||| |||| |||||||||
Sbjct: 239 gtgatggtagtcgtggaattccgcgccaccgta 207
Database: Triticum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 3:01 PM
Number of letters in database: 367,240,239
Number of sequences in database: 636,343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 120,112
Number of Sequences: 636343
Number of extensions: 120112
Number of successful extensions: 37461
Number of sequences better than 0.5: 41
Number of HSP's better than 0.5 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37394
Number of HSP's gapped (non-prelim): 63
length of query: 584
length of database: 367,240,239
effective HSP length: 19
effective length of query: 565
effective length of database: 355,149,722
effective search space: 200659592930
effective search space used: 200659592930
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)