BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2922023.2.1
(1122 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG241060.1|BG241060 OV1_37_F11.b1_A002 Ovary 1 (OV1) Sor... 728 0.0
gb|BE362045.1|BE362045 DG1_83_A08.g1_A002 Dark Grown 1 (DG1... 573 e-161
gb|BE361701.1|BE361701 DG1_81_D12.g1_A002 Dark Grown 1 (DG1... 571 e-161
gb|CD225692.1|CD225692 CCC1_41_D11.b1_A007 Callus culture/c... 555 e-156
gb|BG240742.1|BG240742 OV1_37_F11.g1_A002 Ovary 1 (OV1) Sor... 523 e-146
gb|BF656807.1|BF656807 OV2_23_B10.g1_A002 Ovary 2 (OV2) Sor... 432 e-119
gb|CD225797.1|CD225797 CCC1_41_D11.g1_A007 Callus culture/c... 432 e-119
gb|CD227979.1|CD227979 CCC1_5_D03.b1_A007 Callus culture/ce... 351 9e-095
gb|BE361524.1|BE361524 DG1_81_D12.b1_A002 Dark Grown 1 (DG1... 289 3e-076
gb|CD220854.1|CD220854 CCC1_69_A06.g1_A007 Callus culture/c... 280 3e-073
gb|CD220759.1|CD220759 CCC1_69_A06.b1_A007 Callus culture/c... 274 2e-071
gb|BF657020.1|BF657020 OV2_18_B08.g1_A002 Ovary 2 (OV2) Sor... 260 2e-067
gb|CD228088.1|CD228088 CCC1_5_D03.g1_A007 Callus culture/ce... 248 9e-064
gb|BG273338.1|BG273338 OV2_27_B05.g1_A002 Ovary 2 (OV2) Sor... 242 6e-062
gb|BE362337.1|BE362337 DG1_86_B04.b1_A002 Dark Grown 1 (DG1... 234 1e-059
gb|BE356876.1|BE356876 DG1_145_A01.b1_A002 Dark Grown 1 (DG... 214 1e-053
gb|CW343408.1|CW343408 104_845_11487405_148_36186_085 Sorgh... 151 2e-034
gb|AW923276.1|AW923276 DG1_50_F04.g1_A002 Dark Grown 1 (DG1... 149 7e-034
gb|BF657518.1|BF657518 OV2_23_B10.b1_A002 Ovary 2 (OV2) Sor... 123 4e-026
gb|CW163652.1|CW163652 104_571_11151575_148_36454_090 Sorgh... 121 1e-025
gb|CW265142.1|CW265142 104_734_11231699_116_35259_044 Sorgh... 121 1e-025
gb|CW428753.1|CW428753 fsbb001f141k04f0 Sorghum methylation... 121 1e-025
gb|CD224053.1|CD224053 CCC1_31_A07.g1_A007 Callus culture/c... 121 1e-025
gb|CL189948.1|CL189948 104_407_10905735_114_32477_054 Sorgh... 109 6e-022
gb|CL189949.1|CL189949 104_407_10905735_116_32481_054 Sorgh... 109 6e-022
gb|CW216094.1|CW216094 104_648_11194930_116_37120_035 Sorgh... 109 6e-022
gb|CW220225.1|CW220225 104_654_11197238_148_37151_051 Sorgh... 109 6e-022
gb|CW230934.1|CW230934 104_680_11210859_148_37339_016 Sorgh... 109 6e-022
gb|CW296838.1|CW296838 104_778_11461727_116_35630_084 Sorgh... 109 6e-022
gb|CW303448.1|CW303448 104_788_11465244_116_35692_048 Sorgh... 109 6e-022
gb|BG048347.1|BG048347 OV1_13_A08.b1_A002 Ovary 1 (OV1) Sor... 103 3e-020
gb|BG053668.1|BG053668 RHIZ2_8_C07.b1_A003 Rhizome2 (RHIZ2)... 103 3e-020
gb|CW031141.1|CW031141 104_259_10500633_114_30397 Sorghum m... 100 5e-019
gb|CW031142.1|CW031142 104_259_10500633_116_30398 Sorghum m... 100 5e-019
gb|CW165466.1|CW165466 104_573_11152520_116_36471_018 Sorgh... 100 5e-019
gb|CW165467.1|CW165467 104_573_11152520_148_36474_018 Sorgh... 100 5e-019
gb|CW270328.1|CW270328 104_741_11402351_116_35324_082 Sorgh... 100 5e-019
gb|CW411512.1|CW411512 fsbb001f106l13f0 Sorghum methylation... 100 5e-019
gb|CW501703.1|CW501703 fsbb001f297k14f0 Sorghum methylation... 100 5e-019
gb|BE125214.1|BE125214 DG1_16_H11.b1_A002 Dark Grown 1 (DG1... 100 5e-019
gb|BE358196.1|BE358196 DG1_26_C08.b2_A002 Dark Grown 1 (DG1... 100 5e-019
gb|BE359044.1|BE359044 DG1_38_B01.b1_A002 Dark Grown 1 (DG1... 100 5e-019
gb|BE359118.1|BE359118 DG1_38_B01.g1_A002 Dark Grown 1 (DG1... 100 5e-019
gb|BE360622.1|BE360622 DG1_64_G02.g1_A002 Dark Grown 1 (DG1... 100 5e-019
gb|BE362011.1|BE362011 DG1_83_G04.g1_A002 Dark Grown 1 (DG1... 100 5e-019
gb|BG355798.1|BG355798 EM1_16_H05.g1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|BG464460.1|BG464460 EM1_70_A09.g1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|BG464494.1|BG464494 EM1_70_D12.g1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|BG487644.1|BG487644 EM1_65_E09.g1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|BG355923.2|BG355923 EM1_18_C12.g1_A002 Embryo 1 (EM1) So... 100 5e-019
gb|BZ329505.1|BZ329505 hv86c10.b1 WGS-SbicolorF (JM107 adap... 98 2e-018
gb|CW238807.1|CW238807 104_695_11216932_116_37418_002 Sorgh... 98 2e-018
gb|CN125561.1|CN125561 RHOH1_11_G07.g1_A002 Acid- and alkal... 98 2e-018
gb|CX606946.1|CX606946 ANR1_5_G07.g1_A002 Anaerobic roots S... 98 2e-018
gb|CX613328.1|CX613328 GABR1_7_C03.g1_A002 GA- or brassinol... 98 2e-018
gb|CX613832.1|CX613832 GABR1_10_A09.g1_A002 GA- or brassino... 98 2e-018
gb|CL191862.1|CL191862 104_414_10939844_114_32246_076 Sorgh... 96 8e-018
gb|CW378672.1|CW378672 fsbb001f057i18k0 Sorghum methylation... 96 8e-018
gb|BE355591.1|BE355591 DG1_115_B07.b1_A002 Dark Grown 1 (DG... 96 8e-018
gb|BE356516.1|BE356516 DG1_125_E08.g1_A002 Dark Grown 1 (DG... 96 8e-018
gb|BE358197.1|BE358197 DG1_26_C07.b2_A002 Dark Grown 1 (DG1... 96 8e-018
gb|BE360957.1|BE360957 DG1_68_B06.g1_A002 Dark Grown 1 (DG1... 96 8e-018
gb|BE361232.1|BE361232 DG1_70_E07.g1_A002 Dark Grown 1 (DG1... 96 8e-018
gb|BG410804.1|BG410804 EM1_26_B07.g1_A002 Embryo 1 (EM1) So... 96 8e-018
gb|BG410903.1|BG410903 EM1_27_D04.g1_A002 Embryo 1 (EM1) So... 96 8e-018
gb|BG410934.1|BG410934 EM1_27_G07.g1_A002 Embryo 1 (EM1) So... 96 8e-018
gb|BG463018.1|BG463018 EM1_46_E08.g1_A002 Embryo 1 (EM1) So... 96 8e-018
gb|BG464578.1|BG464578 EM1_71_E05.g1_A002 Embryo 1 (EM1) So... 96 8e-018
gb|BG557179.1|BG557179 EM1_43_E12.g1_A002 Embryo 1 (EM1) So... 96 8e-018
gb|CD223573.1|CD223573 CCC1_28_C04.g1_A007 Callus culture/c... 96 8e-018
gb|CD227768.1|CD227768 CCC1_53_G12.g1_A007 Callus culture/c... 96 8e-018
gb|BG932964.1|BG932964 DG1_69_E07.g1_A002 Dark Grown 1 (DG1... 92 1e-016
gb|CW453444.1|CW453444 fsbb001f197h05k0 Sorghum methylation... 90 5e-016
gb|CF434379.1|CF434379 NIT1_29_H12.g1_A002 Nitrogen-deficie... 90 5e-016
gb|CW263899.1|CW263899 104_732_11230980_148_35238_042 Sorgh... 88 2e-015
gb|BG323138.1|BG323138 EM1_15_D03.g1_A002 Embryo 1 (EM1) So... 88 2e-015
gb|BG556081.1|BG556081 EM1_66_D09.b1_A002 Embryo 1 (EM1) So... 88 2e-015
gb|BG556390.1|BG556390 EM1_66_D09.g1_A002 Embryo 1 (EM1) So... 88 2e-015
gb|CD224878.1|CD224878 CCC1_36_A04.g1_A007 Callus culture/c... 88 2e-015
gb|CF479953.1|CF479953 POL1_62_G09.g1_A002 Pollen Sorghum b... 86 8e-015
gb|CW362939.1|CW362939 fsbb001f034d16k0 Sorghum methylation... 84 3e-014
gb|BE361966.1|BE361966 DG1_83_A08.b1_A002 Dark Grown 1 (DG1... 84 3e-014
gb|BF177182.1|BF177182 EM1_2_G05.b1_A002 Embryo 1 (EM1) Sor... 80 5e-013
gb|CW230933.1|CW230933 104_680_11210859_116_37343_016 Sorgh... 78 2e-012
gb|CW252102.1|CW252102 104_715_11224308_148_35093_048 Sorgh... 78 2e-012
gb|CW313071.1|CW313071 104_803_11471096_116_35785_028 Sorgh... 78 2e-012
gb|CW356149.1|CW356149 fsbb001f021b12k0 Sorghum methylation... 78 2e-012
gb|AW677242.1|AW677242 DG1_6_G07.g1_A002 Dark Grown 1 (DG1)... 78 2e-012
gb|AW922803.1|AW922803 DG1_46_G10.g1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|AW923265.1|AW923265 DG1_50_E02.g1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|BE125370.1|BE125370 DG1_20_A12.b1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|BE125550.1|BE125550 DG1_28_A12.b1_A002 Dark Grown 1 (DG1... 78 2e-012
gb|BE355597.1|BE355597 DG1_115_H08.g1_A002 Dark Grown 1 (DG... 78 2e-012
gb|BE355654.1|BE355654 DG1_115_B07.g1_A002 Dark Grown 1 (DG... 78 2e-012
gb|BE357460.1|BE357460 DG1_20_A12.b2_A002 Dark Grown 1 (DG1... 78 2e-012
gb|BF177035.1|BF177035 EM1_2_G05.g1_A002 Embryo 1 (EM1) Sor... 78 2e-012
gb|BG355799.1|BG355799 EM1_16_H06.g1_A002 Embryo 1 (EM1) So... 78 2e-012
gb|BG411392.1|BG411392 EM1_57_F06.g1_A002 Embryo 1 (EM1) So... 78 2e-012
gb|BG556555.1|BG556555 EM1_38_G02.g1_A002 Embryo 1 (EM1) So... 78 2e-012
gb|BG649172.1|BG649172 EM1_77_D07.g1_A002 Embryo 1 (EM1) So... 78 2e-012
gb|CD223470.1|CD223470 CCC1_28_C04.b1_A007 Callus culture/c... 78 2e-012
gb|CD227837.1|CD227837 CCC1_56_B01.b1_A007 Callus culture/c... 76 8e-012
gb|CD229336.1|CD229336 CCC1_14_B08.g1_A007 Callus culture/c... 76 8e-012
gb|CD432517.1|CD432517 ETH1_30_H01.g1_A002 Ethylene-treated... 76 8e-012
gb|CW365196.1|CW365196 fsbb001f037j24f0 Sorghum methylation... 74 3e-011
gb|BG049618.1|BG049618 EM1_6_F09.g1_A002 Embryo 1 (EM1) Sor... 72 1e-010
gb|BG464739.1|BG464739 EM1_33_D10.g1_A002 Embryo 1 (EM1) So... 72 1e-010
gb|CD229253.1|CD229253 CCC1_14_B08.b1_A007 Callus culture/c... 72 1e-010
gb|CW252101.1|CW252101 104_715_11224308_116_35097_048 Sorgh... 70 5e-010
gb|BE357549.1|BE357549 DG1_21_H01.b1_A002 Dark Grown 1 (DG1... 70 5e-010
gb|BF176756.1|BF176756 EM1_4_G05.g1_A002 Embryo 1 (EM1) Sor... 70 5e-010
gb|BG556991.1|BG556991 EM1_41_B12.g1_A002 Embryo 1 (EM1) So... 70 5e-010
gb|CD210646.1|CD210646 HS1_48_F06.g1_A012 Heat-shocked seed... 70 5e-010
gb|CW152018.1|CW152018 104_553_11144261_148_36327_029 Sorgh... 68 2e-009
gb|CW300392.1|CW300392 104_783_11463632_116_36252_020 Sorgh... 68 2e-009
gb|CW385792.1|CW385792 fsbb001f069g11k0 Sorghum methylation... 68 2e-009
gb|CX613681.1|CX613681 GABR1_9_C10.g1_A002 GA- or brassinol... 68 2e-009
gb|CL160524.1|CL160524 104_351_10805051_114_31824_107 Sorgh... 66 8e-009
gb|BE360527.1|BE360527 DG1_64_G02.b1_A002 Dark Grown 1 (DG1... 66 8e-009
gb|BE361052.1|BE361052 DG1_69_E07.b1_A002 Dark Grown 1 (DG1... 66 8e-009
gb|BG464135.1|BG464135 EM1_70_A09.b1_A002 Embryo 1 (EM1) So... 66 8e-009
gb|CW029241.1|CW029241 104_256_10499562_114_30399 Sorghum m... 64 3e-008
gb|CW129786.1|CW129786 104_512_11114754_148_34773_079 Sorgh... 64 3e-008
gb|CW241171.1|CW241171 104_700_11218620_148_37541_044 Sorgh... 64 3e-008
gb|CW286711.1|CW286711 104_764_11411032_148_35520_056 Sorgh... 64 3e-008
gb|CW313072.1|CW313072 104_803_11471096_148_35789_028 Sorgh... 64 3e-008
gb|BE356445.1|BE356445 DG1_125_E08.b1_A002 Dark Grown 1 (DG... 64 3e-008
gb|CN129042.1|CN129042 RHOH1_33_D12.b3_A002 Acid- and alkal... 64 3e-008
gb|CN129126.1|CN129126 RHOH1_33_D12.g1_A002 Acid- and alkal... 64 3e-008
gb|CN129217.1|CN129217 RHOH1_34_D12.b3_A002 Acid- and alkal... 64 3e-008
gb|CN129305.1|CN129305 RHOH1_34_D12.g1_A002 Acid- and alkal... 64 3e-008
gb|BE362543.1|BE362543 DG1_87_A06.g1_A002 Dark Grown 1 (DG1... 62 1e-007
gb|BG048415.1|BG048415 OV1_13_A08.g1_A002 Ovary 1 (OV1) Sor... 62 1e-007
gb|CW125826.1|CW125826 104_506_11112548_148_34725_076 Sorgh... 60 5e-007
gb|CW058583.1|CW058583 104_301_10518818_114_30158 Sorghum m... 58 2e-006
gb|CW058584.1|CW058584 104_301_10518818_115_30164 Sorghum m... 58 2e-006
gb|CW166562.1|CW166562 104_575_11153119_148_36767_026 Sorgh... 58 2e-006
gb|CW166564.1|CW166564 104_575_11153120_148_36766_026 Sorgh... 58 2e-006
gb|CW461362.1|CW461362 fsbb001f208p19f0 Sorghum methylation... 58 2e-006
gb|CW501704.1|CW501704 fsbb001f297k14k0 Sorghum methylation... 56 7e-006
gb|AW672369.1|AW672369 LG1_359_F01.b1_A002 Light Grown 1 (L... 56 7e-006
gb|CX611431.1|CX611431 ANR1_24_D02.g1_A002 Anaerobic roots ... 56 7e-006
gb|CL193470.1|CL193470 104_417_10940954_114_32276_013 Sorgh... 54 3e-005
gb|CW068361.1|CW068361 104_317_10525083_1_30096 Sorghum met... 54 3e-005
gb|CW251908.1|CW251908 104_714_11224195_148_35070_068 Sorgh... 54 3e-005
gb|CW270329.1|CW270329 104_741_11402351_148_35328_082 Sorgh... 54 3e-005
gb|CW295801.1|CW295801 104_777_11461144_148_35627_060 Sorgh... 54 3e-005
gb|BE356561.1|BE356561 DG1_126_D03.b1_A002 Dark Grown 1 (DG... 54 3e-005
gb|BE359203.1|BE359203 DG1_39_A01.g1_A002 Dark Grown 1 (DG1... 54 3e-005
gb|BE360136.1|BE360136 DG1_61_B11.g1_A002 Dark Grown 1 (DG1... 54 3e-005
gb|BE362352.1|BE362352 DG1_86_D07.b1_A002 Dark Grown 1 (DG1... 54 3e-005
gb|BG054441.1|BG054441 OV2_4_E05.b1_A002 Ovary 2 (OV2) Sorg... 54 3e-005
gb|BG355691.2|BG355691 EM1_18_C12.b1_A002 Embryo 1 (EM1) So... 54 3e-005
gb|CD205205.1|CD205205 HS1_12_E12.g1_A012 Heat-shocked seed... 54 3e-005
gb|CD210758.1|CD210758 HS1_49_E10.g1_A012 Heat-shocked seed... 54 3e-005
gb|CD224851.1|CD224851 CCC1_36_E06.g1_A007 Callus culture/c... 54 3e-005
gb|CD226992.1|CD226992 CCC1_49_F04.g1_A007 Callus culture/c... 54 3e-005
gb|CD228898.1|CD228898 CCC1_10_E04.g1_A007 Callus culture/c... 54 3e-005
gb|CD462480.1|CD462480 ETH1_37_B06.g1_A002 Ethylene-treated... 54 3e-005
gb|CD463126.1|CD463126 ETH1_42_C11.g1_A002 Ethylene-treated... 54 3e-005
gb|CF487080.1|CF487080 POL1_41_D05.g1_A002 Pollen Sorghum b... 54 3e-005
gb|CF488399.1|CF488399 POL1_49_E10.g1_A002 Pollen Sorghum b... 54 3e-005
gb|CF489753.1|CF489753 POL1_59_A06.g1_A002 Pollen Sorghum b... 54 3e-005
gb|CN132660.1|CN132660 OX1_7_A12.g1_A002 Oxidatively-stress... 54 3e-005
gb|CN145040.1|CN145040 WOUND1_26_A09.g1_A002 Wounded leaves... 54 3e-005
gb|CN147677.1|CN147677 WOUND1_51_A07.g1_A002 Wounded leaves... 54 3e-005
gb|CX606948.1|CX606948 ANR1_5_G09.g1_A002 Anaerobic roots S... 54 3e-005
gb|CX607262.1|CX607262 ANR1_7_C09.g1_A002 Anaerobic roots S... 54 3e-005
gb|CX608924.1|CX608924 ANR1_9_C11.g1_A002 Anaerobic roots S... 54 3e-005
gb|CX608964.1|CX608964 ANR1_9_G07.g1_A002 Anaerobic roots S... 54 3e-005
gb|CX610748.1|CX610748 ANR1_20_C11.g1_A002 Anaerobic roots ... 54 3e-005
gb|CX613365.1|CX613365 GABR1_7_F06.g1_A002 GA- or brassinol... 54 3e-005
gb|CX616725.1|CX616725 GABR1_29_C08.g1_A002 GA- or brassino... 54 3e-005
gb|CX619733.1|CX619733 GABR1_47_A12.g1_A002 GA- or brassino... 54 3e-005
gb|CX623113.1|CX623113 GABR1_67_G04.g1_A002 GA- or brassino... 54 3e-005
gb|BZ345278.1|BZ345278 hr48e10.b1 WGS-SbicolorF (JM107 adap... 52 1e-004
gb|CW059089.1|CW059089 104_301_10519111_114_30160 Sorghum m... 52 1e-004
gb|CW158105.1|CW158105 104_561_11147877_148_36388_083 Sorgh... 52 1e-004
gb|CW212543.1|CW212543 104_643_11191078_116_37021_083 Sorgh... 52 1e-004
gb|CW212544.1|CW212544 104_643_11191078_148_37020_083 Sorgh... 52 1e-004
gb|CW213445.1|CW213445 104_645_11191549_116_37034_063 Sorgh... 52 1e-004
gb|CW213446.1|CW213446 104_645_11191549_148_37035_063 Sorgh... 52 1e-004
gb|CW288244.1|CW288244 104_766_11411847_148_35535_054 Sorgh... 52 1e-004
gb|BG048288.1|BG048288 OV1_16_C10.g1_A002 Ovary 1 (OV1) Sor... 52 1e-004
gb|BG239941.1|BG239941 OV1_31_A03.g1_A002 Ovary 1 (OV1) Sor... 52 1e-004
gb|BG240636.1|BG240636 OV1_32_D02.b1_A002 Ovary 1 (OV1) Sor... 52 1e-004
gb|BG933604.1|BG933604 OV1_32_D02.g1_A002 Ovary 1 (OV1) Sor... 52 1e-004
gb|CN125476.1|CN125476 RHOH1_11_G07.b1_A002 Acid- and alkal... 52 1e-004
gb|CN141491.1|CN141491 OX1_52_B02.b1_A002 Oxidatively-stres... 52 1e-004
gb|CX606852.1|CX606852 ANR1_5_G07.b1_A002 Anaerobic roots S... 52 1e-004
gb|CX613598.1|CX613598 GABR1_9_C10.b1_A002 GA- or brassinol... 52 1e-004
gb|CX621762.1|CX621762 GABR1_60_B10.b1_A002 GA- or brassino... 52 1e-004
gb|CW023656.1|CW023656 104_163_10432571_1_30001 Sorghum met... 50 4e-004
gb|CW023657.1|CW023657 104_163_10432571_5_30009 Sorghum met... 50 4e-004
gb|CW438908.1|CW438908 fsbb001f156m13f0 Sorghum methylation... 50 4e-004
gb|BG649552.1|BG649552 EM1_80_G08.b1_A002 Embryo 1 (EM1) So... 50 4e-004
gb|CD220118.1|CD220118 CCC1_65_G03.b1_A007 Callus culture/c... 50 4e-004
gb|CD222123.1|CD222123 CCC1_2_A08.b1_A007 Callus culture/ce... 50 4e-004
gb|CD225063.1|CD225063 CCC1_38_C02.b1_A007 Callus culture/c... 50 4e-004
gb|CW411513.1|CW411513 fsbb001f106l13k0 Sorghum methylation... 48 0.002
gb|AW677231.1|AW677231 DG1_6_H09.g1_A002 Dark Grown 1 (DG1)... 48 0.002
gb|AW677272.1|AW677272 DG1_6_B10.g1_A002 Dark Grown 1 (DG1)... 48 0.002
gb|AW922547.1|AW922547 DG1_20_A12.g1_A002 Dark Grown 1 (DG1... 48 0.002
gb|BE355983.1|BE355983 DG1_121_C08.b1_A002 Dark Grown 1 (DG... 48 0.002
gb|BF176951.1|BF176951 EM1_4_G05.b1_A002 Embryo 1 (EM1) Sor... 48 0.002
gb|BF480850.1|BF480850 FM1_14_B02.g1_A003 Floral-Induced Me... 48 0.002
gb|BF481177.1|BF481177 FM1_17_D04.g1_A003 Floral-Induced Me... 48 0.002
gb|BG050507.1|BG050507 FM1_70_C06.g1_A003 Floral-Induced Me... 48 0.002
gb|BG051257.1|BG051257 FM1_54_B10.g1_A003 Floral-Induced Me... 48 0.002
gb|BG051445.1|BG051445 FM1_56_E09.g1_A003 Floral-Induced Me... 48 0.002
gb|BG051716.1|BG051716 FM1_60_D08.g1_A003 Floral-Induced Me... 48 0.002
gb|BG157930.1|BG157930 EM1_6_F09.b1_A002 Embryo 1 (EM1) Sor... 48 0.002
gb|BG273555.1|BG273555 OV2_27_B05.b1_A002 Ovary 2 (OV2) Sor... 48 0.002
gb|BG322623.1|BG322623 EM1_41_B12.b1_A002 Embryo 1 (EM1) So... 48 0.002
gb|BG464167.1|BG464167 EM1_70_D12.b1_A002 Embryo 1 (EM1) So... 48 0.002
gb|BG465105.1|BG465105 EM1_33_D10.b1_A002 Embryo 1 (EM1) So... 48 0.002
gb|CD229845.1|CD229845 CCC1_20_C05.g1_A007 Callus culture/c... 48 0.002
gb|AY144442.1| Sorghum bicolor BAC 95A23/98N8.1 Rph region,... 48 0.002
gb|CL177995.1|CL177995 104_385_10894245_116_31914_309 Sorgh... 46 0.007
gb|CW513077.1|CW513077 115_3_10511222_1_30020 Sorghum unfil... 46 0.007
gb|CW071662.1|CW071662 104_323_10591624_114_30474 Sorghum m... 46 0.007
gb|CW160702.1|CW160702 104_567_11150024_148_36508_026 Sorgh... 46 0.007
gb|CW166561.1|CW166561 104_575_11153119_116_36768_026 Sorgh... 46 0.007
gb|CW166563.1|CW166563 104_575_11153120_116_36765_026 Sorgh... 46 0.007
gb|CW295800.1|CW295800 104_777_11461144_116_35623_060 Sorgh... 46 0.007
gb|CW398250.1|CW398250 fsbb001f087j18f0 Sorghum methylation... 46 0.007
gb|AW564414.1|AW564414 LG1_292_D01.b1_A002 Light Grown 1 (L... 46 0.007
gb|AW565600.1|AW565600 LG1_346_G03.g1_A002 Light Grown 1 (L... 46 0.007
gb|AW922219.1|AW922219 DG1_17_C10.b1_A002 Dark Grown 1 (DG1... 46 0.007
gb|BE125416.1|BE125416 DG1_25_C10.b1_A002 Dark Grown 1 (DG1... 46 0.007
gb|BF705354.1|BF705354 RHIZ2_3_A02.b1_A003 Rhizome2 (RHIZ2)... 46 0.007
gb|BM323497.1|BM323497 PIC1_20_A05.b1_A002 Pathogen-infecte... 46 0.007
gb|CB924683.1|CB924683 ABA1_1_G06.g1_A012 Abscisic acid-tre... 46 0.007
gb|CB925037.1|CB925037 ABA1_29_F09.g1_A012 Abscisic acid-tr... 46 0.007
gb|CB925817.1|CB925817 ABA1_23_F12.g1_A012 Abscisic acid-tr... 46 0.007
gb|CB925947.1|CB925947 ABA1_30_F12.g1_A012 Abscisic acid-tr... 46 0.007
gb|CB926068.1|CB926068 ABA1_31_G08.g1_A012 Abscisic acid-tr... 46 0.007
gb|CB926680.1|CB926680 ABA1_3_D12.g1_A012 Abscisic acid-tre... 46 0.007
gb|CB927579.1|CB927579 ABA1_26_G05.g1_A012 Abscisic acid-tr... 46 0.007
gb|CB927847.1|CB927847 ABA1_34_C07.g1_A012 Abscisic acid-tr... 46 0.007
gb|CB928411.1|CB928411 ABA1_15_H10.g1_A012 Abscisic acid-tr... 46 0.007
gb|CD204582.1|CD204582 HS1_8_A07.g1_A012 Heat-shocked seedl... 46 0.007
gb|CD204738.1|CD204738 HS1_9_F10.g1_A012 Heat-shocked seedl... 46 0.007
gb|CD205682.1|CD205682 HS1_15_G04.g1_A012 Heat-shocked seed... 46 0.007
gb|CD205701.1|CD205701 HS1_15_G09.g1_A012 Heat-shocked seed... 46 0.007
gb|CD205830.1|CD205830 HS1_18_H07.g1_A012 Heat-shocked seed... 46 0.007
gb|CD207758.1|CD207758 HS1_34_D12.g1_A012 Heat-shocked seed... 46 0.007
gb|CD208003.1|CD208003 HS1_36_D03.g1_A012 Heat-shocked seed... 46 0.007
gb|CD209589.1|CD209589 HS1_43_C08.g1_A012 Heat-shocked seed... 46 0.007
gb|CD210432.1|CD210432 HS1_51_B05.b1_A012 Heat-shocked seed... 46 0.007
gb|CD211053.1|CD211053 HS1_58_G10.g1_A012 Heat-shocked seed... 46 0.007
gb|CD213275.1|CD213275 HS1_29_E10.g1_A012 Heat-shocked seed... 46 0.007
gb|CD213882.1|CD213882 HS1_53_F04.g1_A012 Heat-shocked seed... 46 0.007
gb|CD213968.1|CD213968 HS1_69_H11.g1_A012 Heat-shocked seed... 46 0.007
gb|CD221277.1|CD221277 CCC1_74_H06.g1_A007 Callus culture/c... 46 0.007
gb|CD221613.1|CD221613 CCC1_55_F12.g1_A007 Callus culture/c... 46 0.007
gb|CD227366.1|CD227366 CCC1_50_A08.g1_A007 Callus culture/c... 46 0.007
gb|CD230836.1|CD230836 SS1_9_B01.g1_A012 Salt-stressed seed... 46 0.007
gb|CD232894.1|CD232894 SS1_10_H03.g1_A012 Salt-stressed see... 46 0.007
gb|CD233534.1|CD233534 SS1_2_B06.g1_A012 Salt-stressed seed... 46 0.007
gb|CD233663.1|CD233663 SS1_3_H07.g1_A012 Salt-stressed seed... 46 0.007
gb|CD426654.1|CD426654 SA1_22_D10.g1_A002 Salicylic acid-tr... 46 0.007
gb|CD463454.1|CD463454 ETH1_44_F08.g1_A002 Ethylene-treated... 46 0.007
gb|CD464119.1|CD464119 ETH1_48_F11.g1_A002 Ethylene-treated... 46 0.007
gb|CF428799.1|CF428799 PH1_17_A09.g1_A002 Phosphorous-defic... 46 0.007
gb|CF428805.1|CF428805 PH1_17_B11.g1_A002 Phosphorous-defic... 46 0.007
gb|CF433176.1|CF433176 NIT1_25_B04.g1_A002 Nitrogen-deficie... 46 0.007
gb|CF433520.1|CF433520 NIT1_27_F03.g1_A002 Nitrogen-deficie... 46 0.007
gb|CF433676.1|CF433676 NIT1_28_A11.g1_A002 Nitrogen-deficie... 46 0.007
gb|CF433831.1|CF433831 NIT1_30_H02.g1_A002 Nitrogen-deficie... 46 0.007
gb|CF433902.1|CF433902 NIT1_30_C05.g1_A002 Nitrogen-deficie... 46 0.007
gb|CF434209.1|CF434209 NIT1_32_H07.g1_A002 Nitrogen-deficie... 46 0.007
gb|CF486899.1|CF486899 POL1_40_B09.g1_A002 Pollen Sorghum b... 46 0.007
gb|CN126529.1|CN126529 RHOH1_17_E07.g1_A002 Acid- and alkal... 46 0.007
gb|CN127884.1|CN127884 RHOH1_25_D10.g1_A002 Acid- and alkal... 46 0.007
gb|CN128642.1|CN128642 RHOH1_30_F04.g1_A002 Acid- and alkal... 46 0.007
gb|CN133182.1|CN133182 OX1_10_D10.g1_A002 Oxidatively-stres... 46 0.007
gb|CN134362.1|CN134362 OX1_25_H11.g1_A002 Oxidatively-stres... 46 0.007
gb|CN136823.1|CN136823 OX1_53_B08.g1_A002 Oxidatively-stres... 46 0.007
gb|CN138452.1|CN138452 OX1_63_H03.g1_A002 Oxidatively-stres... 46 0.007
gb|CN140011.1|CN140011 OX1_33_B03.g1_A002 Oxidatively-stres... 46 0.007
gb|CN143165.1|CN143165 WOUND1_14_B11.g1_A002 Wounded leaves... 46 0.007
gb|CN145711.1|CN145711 WOUND1_34_F02.g1_A002 Wounded leaves... 46 0.007
gb|CN150502.1|CN150502 WOUND1_69_D02.g1_A002 Wounded leaves... 46 0.007
gb|CX607276.1|CX607276 ANR1_7_D11.g1_A002 Anaerobic roots S... 46 0.007
gb|CX607300.1|CX607300 ANR1_7_F11.g1_A002 Anaerobic roots S... 46 0.007
gb|CX607414.1|CX607414 ANR1_8_B12.g1_A002 Anaerobic roots S... 46 0.007
gb|CX608278.1|CX608278 ANR1_37_E03.g1_A002 Anaerobic roots ... 46 0.007
gb|CX608460.1|CX608460 ANR1_38_F03.g1_A002 Anaerobic roots ... 46 0.007
gb|CX610067.1|CX610067 ANR1_16_A02.g1_A002 Anaerobic roots ... 46 0.007
gb|CX610121.1|CX610121 ANR1_16_F04.g1_A002 Anaerobic roots ... 46 0.007
gb|CX610128.1|CX610128 ANR1_16_F11.g1_A002 Anaerobic roots ... 46 0.007
gb|CX610131.1|CX610131 ANR1_16_G03.g1_A002 Anaerobic roots ... 46 0.007
gb|CX610298.1|CX610298 ANR1_17_G01.g1_A002 Anaerobic roots ... 46 0.007
gb|CX610303.1|CX610303 ANR1_17_G06.g1_A002 Anaerobic roots ... 46 0.007
gb|CX611746.1|CX611746 ANR1_26_A12.g1_A002 Anaerobic roots ... 46 0.007
gb|CX612341.1|CX612341 GABR1_1_H06.g1_A002 GA- or brassinol... 46 0.007
gb|CX613859.1|CX613859 GABR1_10_D01.g1_A002 GA- or brassino... 46 0.007
gb|CX614011.1|CX614011 GABR1_11_C02.g1_A002 GA- or brassino... 46 0.007
gb|CX614027.1|CX614027 GABR1_11_D06.g1_A002 GA- or brassino... 46 0.007
gb|CX614875.1|CX614875 GABR1_16_H02.g1_A002 GA- or brassino... 46 0.007
gb|CX615059.1|CX615059 GABR1_17_H07.g1_A002 GA- or brassino... 46 0.007
gb|CX615183.1|CX615183 GABR1_18_D09.g1_A002 GA- or brassino... 46 0.007
gb|CX616101.1|CX616101 GABR1_25_G08.g1_A002 GA- or brassino... 46 0.007
gb|CX617732.1|CX617732 GABR1_35_A10.g1_A002 GA- or brassino... 46 0.007
gb|CX619172.1|CX619172 GABR1_43_H11.g1_A002 GA- or brassino... 46 0.007
gb|CX620103.1|CX620103 GABR1_49_G12.g1_A002 GA- or brassino... 46 0.007
gb|CX620437.1|CX620437 GABR1_51_G10.g1_A002 GA- or brassino... 46 0.007
gb|CX620536.1|CX620536 GABR1_52_B01.g1_A002 GA- or brassino... 46 0.007
gb|CX621332.1|CX621332 GABR1_57_B09.g1_A002 GA- or brassino... 46 0.007
gb|CX622181.1|CX622181 GABR1_62_B01.g2_A002 GA- or brassino... 46 0.007
gb|CX622569.1|CX622569 GABR1_64_F01.g2_A002 GA- or brassino... 46 0.007
gb|CX623053.1|CX623053 GABR1_67_A12.g1_A002 GA- or brassino... 46 0.007
gb|CX623109.1|CX623109 GABR1_67_F11.g1_A002 GA- or brassino... 46 0.007
gb|AF466200.2| Sorghum bicolor putative protein kinase gene... 46 0.007
gb|BZ365981.1|BZ365981 ic93g12.b1 WGS-SbicolorF (JM107 adap... 44 0.028
gb|BZ422342.1|BZ422342 id52e08.b1 WGS-SbicolorF (DH5a methy... 44 0.028
gb|CL154972.1|CL154972 104_340_10781779_114_31469_259 Sorgh... 44 0.028
gb|CL184232.1|CL184232 104_397_10898718_114_32361_025 Sorgh... 44 0.028
gb|CL184233.1|CL184233 104_397_10898718_116_32365_025 Sorgh... 44 0.028
gb|CL191540.1|CL191540 104_410_10906870_116_32537_085 Sorgh... 44 0.028
gb|CW038532.1|CW038532 104_270_10504976_115_30386 Sorghum m... 44 0.028
gb|CW078906.1|CW078906 104_397_10898718_114_32381_025 Sorgh... 44 0.028
gb|CW120570.1|CW120570 104_498_11109408_148_34656_096 Sorgh... 44 0.028
gb|CW217487.1|CW217487 104_650_11195681_148_37130_067 Sorgh... 44 0.028
gb|CW303542.1|CW303542 104_788_11465294_148_35696_061 Sorgh... 44 0.028
gb|CW444220.1|CW444220 fsbb001f164l08k0 Sorghum methylation... 44 0.028
gb|CF482405.1|CF482405 POL1_6_F05.g1_A002 Pollen Sorghum bi... 44 0.028
gb|CF488322.1|CF488322 POL1_49_D12.b1_A002 Pollen Sorghum b... 44 0.028
gb|CF488745.1|CF488745 POL1_51_H12.g1_A002 Pollen Sorghum b... 44 0.028
gb|CF489081.1|CF489081 POL1_54_F10.b1_A002 Pollen Sorghum b... 44 0.028
gb|CW117585.1|CW117585 104_493_11107734_148_34611_019 Sorgh... 42 0.11
gb|CW322871.1|CW322871 104_816_11476333_116_35948_049 Sorgh... 42 0.11
gb|CN150957.1|CN150957 WOUND1_72_C01.g1_A002 Wounded leaves... 42 0.11
gb|CX608312.1|CX608312 ANR1_37_H05.g1_A002 Anaerobic roots ... 42 0.11
gb|BZ329506.1|BZ329506 hv86c10.g1 WGS-SbicolorF (JM107 adap... 40 0.43
gb|BZ343203.1|BZ343203 ho52a03.b1 WGS-SbicolorF (JM107 adap... 40 0.43
gb|BZ343236.1|BZ343236 ho52e04.b1 WGS-SbicolorF (JM107 adap... 40 0.43
gb|BZ347906.1|BZ347906 ho52e04.g1 WGS-SbicolorF (JM107 adap... 40 0.43
gb|CL191810.1|CL191810 104_414_10939810_114_32248_045 Sorgh... 40 0.43
gb|CW037306.1|CW037306 104_269_10504265_115_30384 Sorghum m... 40 0.43
gb|CW119932.1|CW119932 104_497_11109041_148_34644_077 Sorgh... 40 0.43
gb|CW137833.1|CW137833 104_525_11119881_116_34876_041 Sorgh... 40 0.43
gb|CW137834.1|CW137834 104_525_11119881_148_34872_041 Sorgh... 40 0.43
gb|CW145901.1|CW145901 104_538_11138707_148_34980_070 Sorgh... 40 0.43
gb|CW153735.1|CW153735 104_555_11145207_116_36343_056 Sorgh... 40 0.43
gb|CW173761.1|CW173761 104_585_11157023_116_36554_088 Sorgh... 40 0.43
gb|CW250598.1|CW250598 104_712_11223479_116_35050_082 Sorgh... 40 0.43
gb|CW464243.1|CW464243 fsbb001f213g04f0 Sorghum methylation... 40 0.43
gb|CW464244.1|CW464244 fsbb001f213g04k0 Sorghum methylation... 40 0.43
gb|BE356681.1|BE356681 DG1_12_C05.b1_A002 Dark Grown 1 (DG1... 40 0.43
gb|BE359253.1|BE359253 DG1_39_E07.g1_A002 Dark Grown 1 (DG1... 40 0.43
gb|BG052518.1|BG052518 RHIZ2_26_B08.g1_A003 Rhizome2 (RHIZ2... 40 0.43
gb|CD462377.1|CD462377 ETH1_37_B06.b1_A002 Ethylene-treated... 40 0.43
gb|CF427904.1|CF427904 PH1_11_F02.g1_A002 Phosphorous-defic... 40 0.43
gb|CF429342.1|CF429342 PH1_21_G12.b1_A002 Phosphorous-defic... 40 0.43
gb|CF429353.1|CF429353 PH1_21_C12.b1_A002 Phosphorous-defic... 40 0.43
gb|CF432838.1|CF432838 NIT1_19_D03.b1_A002 Nitrogen-deficie... 40 0.43
gb|CF432937.1|CF432937 NIT1_20_F09.b1_A002 Nitrogen-deficie... 40 0.43
gb|CF488555.1|CF488555 POL1_50_E10.g1_A002 Pollen Sorghum b... 40 0.43
gb|CN145653.1|CN145653 WOUND1_34_H07.b1_A002 Wounded leaves... 40 0.43
gb|CX613239.1|CX613239 GABR1_7_C03.b1_A002 GA- or brassinol... 40 0.43
gb|CX614710.1|CX614710 GABR1_15_G03.g1_A002 GA- or brassino... 40 0.43
gb|CX617075.1|CX617075 GABR1_31_C03.g1_A002 GA- or brassino... 40 0.43
>gb|BG241060.1|BG241060 OV1_37_F11.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 502
Score = 728 bits (367), Expect = 0.0
Identities = 474/511 (92%), Gaps = 9/511 (1%)
Strand = Plus / Minus
Query: 561 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgac 620
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 cgccttcttgagcgccgactcgtcgttggccggcacgtcctcgtacccgtcgatggtgac 443
Query: 621 gaccggggccggcgacttcttgcaggacgcctggcgcgctctgtacgggtacgcgtcctc 680
|||| |||||||||||||||||||| |||||||| || |||||||||||||||||||
Sbjct: 442 cgccggcgccggcgacttcttgcaggaggcctggcgggccttgtacgggtacgcgtcctc 383
Query: 681 cgccgccaccccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgtt 740
||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 382 cgccgccaccccgccgtgcttggcgatgtactggaacgcgtagtccatgagcccgccgtc 323
Query: 741 gcagccggcgttggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gcacccggcgttgcccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 263
Query: 801 gttcttggtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagca 860
|||||| ||||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct: 262 gttcttcgtcttgatcgcgttgatcccctccactgccgcgatcgtcgagaacgcccagca 203
Query: 861 gctaccgcattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgac 920
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 202 gctaccgcactggccctggtccttgacgtcggtgacggcgcccttctgcctccagtcgac 143
Query: 921 ggaggccgggacgtcgcgcgcgtcggcgtacatgaacgacgacgccgacgccgaggagcc 980
||||| ||||| ||| |||||| ||||||||||||| || ||||| ||| ||
Sbjct: 142 ggaggtcgggaggtcacgcgcgccggcgtacatgaaggaggacgc---------ggatcc 92
Query: 981 ctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcg 1040
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 91 ctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagccggcgtagtggcggcg 32
Query: 1041 gaactcgtcggcggtcatgtcgccgaagcgg 1071
|||||||||||||||||||||||||||||||
Sbjct: 31 gaactcgtcggcggtcatgtcgccgaagcgg 1
>gb|BE362045.1|BE362045 DG1_83_A08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 646
Score = 573 bits (289), Expect = e-161
Identities = 414/456 (90%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 456 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 397
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 396 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 337
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttc 396
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 336 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccacgagttc 277
Query: 397 ttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccg 456
|| |||| |||||||||||| |||||||||| |||||||| |||||||||| ||||||
Sbjct: 276 ttcaccacccagtacttggtcccgtccgcggccaccccgtacccgaccgccgtgacgcca 217
Query: 457 tggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactggaagtgc 516
|||||||||||||| |||||||| || | ||| |||||||| |||||||||||||||||
Sbjct: 216 tggtccagctccgtgccgcacctccccgcgaacaccccctccgagtagaactggaagtgg 157
Query: 517 gagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttgagcgcc 576
||||| || ||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 156 gagccactcgcctcgatggccaccgacaccggctggtgcgccaccgccttcttgagcgcc 97
Query: 577 gactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacgaccggggccggcgac 636
||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||
Sbjct: 96 gactcgtcgttggccggcacgtcctcgtacccgtcgatggtgaccgccggcgccggcgac 37
Query: 637 ttcttgcaggacgcctggcgcgctctgtacgggtac 672
||||||||||| ||||| || || |||||||||||
Sbjct: 36 ttcttgcaggaggcctgncgggccttgtacgggtac 1
Score = 48.1 bits (24), Expect = 0.002
Identities = 76/91 (83%), Gaps = 8/91 (8%)
Strand = Plus / Minus
Query: 76 tggtattacatgaatgcaggt-gtacgatgtgcgtatgccattcag-acattcacagtcg 133
|||||||||||||||||| || ||| ||||||||||| ||||||| |||||| ||| |
Sbjct: 639 tggtattacatgaatgcacgttgtataatgtgcgtatgtcattcagtacattctcagacc 580
Query: 134 gc------gatgttcctgtccgagcatacat 158
|| |||||||||||||||||||||||
Sbjct: 579 gcaacagagatgttcctgtccgagcatacat 549
>gb|BE361701.1|BE361701 DG1_81_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 568
Score = 571 bits (288), Expect = e-161
Identities = 414/456 (90%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 462 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 403
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 402 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 343
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttc 396
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 342 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccacgagttc 283
Query: 397 ttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccg 456
|| |||| |||||||||||| |||||||||| |||||||| |||||||||| ||||||
Sbjct: 282 ttcaccacccagtacttggtcccgtccgcggccaccccgtacccgaccgccgtgacgcca 223
Query: 457 tggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactggaagtgc 516
|||||||||||||| |||||||| || | ||| |||||||| |||||||||||||||||
Sbjct: 222 tggtccagctccgtgccgcacctccccgcgaacaccccctccgagtagaactggaagtgg 163
Query: 517 gagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttgagcgcc 576
||||| || ||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 162 gagccactcgcctcgatggccaccgacaccggctggtgcgccaccgccttcttgagcgcc 103
Query: 577 gactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacgaccggggccggcgac 636
||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||
Sbjct: 102 gactcgtcgttggccggcacgtcctcgtacccgtcgatggtgaccgccggcgccggcgac 43
Query: 637 ttcttgcaggacgcctggcgcgctctgtacgggtac 672
|||||||| || |||||||| || |||||||||||
Sbjct: 42 ttcttgcaagaggcctggcgggccttgtacgggtac 7
>gb|CD225692.1|CD225692 CCC1_41_D11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_D11_A007 3', mRNA sequence
Length = 625
Score = 555 bits (280), Expect = e-156
Identities = 391/428 (91%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 428 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 369
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 368 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 309
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttc 396
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 308 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccacgagttc 249
Query: 397 ttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccg 456
|| |||| |||||||||||| |||||||||| |||||||| |||||||||| ||||||
Sbjct: 248 ttcaccacccagtacttggtcccgtccgcggccaccccgtacccgaccgccgtgacgcca 189
Query: 457 tggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactggaagtgc 516
|||||||||||||| |||||||| || | ||| |||||||| |||||||||||||||||
Sbjct: 188 tggtccagctccgtgccgcacctccccgcgaacaccccctccgagtagaactggaagtgg 129
Query: 517 gagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttgagcgcc 576
||||| || ||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 128 gagccactcgcctcgatggccaccgacaccggctggtgcgccaccgccttcttgagcgcc 69
Query: 577 gactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacgaccggggccggcgac 636
||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||
Sbjct: 68 gactcgtcgttggccggcacgtcctcgtacccgtcgatggtgaccgccggcgccggcgac 9
Query: 637 ttcttgca 644
||||||||
Sbjct: 8 ttcttgca 1
Score = 61.9 bits (31), Expect = 1e-007
Identities = 76/90 (84%), Gaps = 7/90 (7%)
Strand = Plus / Minus
Query: 76 tggtattacatgaatgcaggt-gtacgatgtgcgtatgccattcagacattcacagtcgg 134
|||||||||||||||||| || ||| ||||||||||| ||||||||||||| ||| | |
Sbjct: 610 tggtattacatgaatgcacgttgtataatgtgcgtatgtcattcagacattctcagaccg 551
Query: 135 c------gatgttcctgtccgagcatacat 158
| |||||||||||||||||||||||
Sbjct: 550 caacagagatgttcctgtccgagcatacat 521
>gb|BG240742.1|BG240742 OV1_37_F11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 645
Score = 523 bits (264), Expect = e-146
Identities = 366/400 (91%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 400 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 341
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 340 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 281
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttc 396
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 280 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccacgagttc 221
Query: 397 ttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccg 456
|| |||| |||||||||||| |||||||||| |||||||| |||||||||| ||||||
Sbjct: 220 ttcaccacccagtacttggtcccgtccgcggccaccccgtacccgaccgccgtgacgcca 161
Query: 457 tggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactggaagtgc 516
|||||||||||||| |||||||| || | ||| |||||||| |||||||||||||||||
Sbjct: 160 tggtccagctccgtgccgcacctccccgcgaacaccccctccgagtagaactggaagtgg 101
Query: 517 gagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttgagcgcc 576
||||| || ||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 100 gagccactcgcctcgatggccaccgacaccggctggtgcgccaccgccttcttgagcgcc 41
Query: 577 gactcgtcgttggccggcacgtcctcgtagccgtcgatgg 616
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 40 gactcgtcgttggccggcacgtcctcgtacccgtcgatgg 1
Score = 105 bits (53), Expect = 9e-021
Identities = 125/148 (84%), Gaps = 12/148 (8%)
Strand = Plus / Minus
Query: 23 taatataataataaccgaatgaaatgaaagttgctggtacatcaactctcgac-----tg 77
||||||||||||||| |||||||| ||||| |||||||| ||||||||||||| ||
Sbjct: 640 taatataataataactgaatgaaacgaaagctgctggtagatcaactctcgactggtatg 581
Query: 78 gtattacatgaatgca-ggtgtacgatgtgcgtatgccattcagacattcacagtcggc- 135
|||||||||||||||| | |||| ||||||||||| ||||||||||||| ||| | ||
Sbjct: 580 gtattacatgaatgcacgttgtataatgtgcgtatgtcattcagacattctcagaccgca 521
Query: 136 -----gatgttcctgtccgagcatacat 158
|||||||||||||||||||||||
Sbjct: 520 acagagatgttcctgtccgagcatacat 493
>gb|BF656807.1|BF656807 OV2_23_B10.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 417
Score = 432 bits (218), Expect = e-119
Identities = 317/350 (90%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 350 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 291
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 290 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 231
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttc 396
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 230 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccacgagttc 171
Query: 397 ttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccg 456
|| |||| |||||||||||| |||||||||| |||||||| |||||||||| ||||||
Sbjct: 170 ttcaccacccagtacttggtcccgtccgcggccaccccgtacccgaccgccgtgacgcca 111
Query: 457 tggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactggaagtgc 516
|||||||||||||| |||||||| || | ||| |||||||| |||||||||||||||||
Sbjct: 110 tggtccagctccgtgccgcacctccccgcgaacaccccctccgagtagaactggaagtgg 51
Query: 517 gagccgctggcctcgatggcgacggacacgggctggtgcgccaccgcctt 566
||||| || ||||||||||| || ||||| ||||||||||||||||||||
Sbjct: 50 gagccactcgcctcgatggccaccgacaccggctggtgcgccaccgcctt 1
>gb|CD225797.1|CD225797 CCC1_41_D11.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_41_D11_A007 5', mRNA sequence
Length = 659
Score = 432 bits (218), Expect = e-119
Identities = 295/322 (91%), Gaps = 9/322 (2%)
Strand = Plus / Minus
Query: 788 acagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcggcgatcgtcg 847
||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||||||
Sbjct: 659 acagcgacgtcaggttcttcgtcttgatcgcgttgatcccctccactgccgcgatcgtcg 600
Query: 848 agaacgcccagcagctaccgcattggccctggtccttgacgtcggtgacagcgcccttct 907
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 599 agaacgcccagcagctaccgcactggccctggtccttgacgtcggtgacggcgcccttct 540
Query: 908 gcctccagtcgacggaggccgggacgtcgcgcgcgtcggcgtacatgaacgacgacgccg 967
|||||||||||||||||| ||||| ||| |||||| ||||||||||||| || |||||
Sbjct: 539 gcctccagtcgacggaggtcgggaggtcacgcgcgccggcgtacatgaaggaggacgc-- 482
Query: 968 acgccgaggagccctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagcccg 1027
||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 481 -------ggatccctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagccgg 429
Query: 1028 cgtagtggcgtcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgt 1087
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cgtagtggcggcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgt 369
Query: 1088 agggctcgtcccggcggttgaa 1109
| ||||||||||| |||||||
Sbjct: 368 acggctcgtcccgctggttgaa 347
>gb|CD227979.1|CD227979 CCC1_5_D03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_D03_A007 3', mRNA sequence
Length = 518
Score = 351 bits (177), Expect = 9e-095
Identities = 255/281 (90%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 281 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 222
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 221 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 162
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttc 396
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 161 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccacgagttc 102
Query: 397 ttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcgacgccg 456
|| |||| |||||||||||| |||||||||| |||||||| |||||||||| ||||||
Sbjct: 101 ttcaccacccagtacttggtcccgtccgcggccaccccgtacccgaccgccgtgacgcca 42
Query: 457 tggtccagctccgtcccgcacctgccggagaagaccccctc 497
|||||||||||||| |||||||| || | ||| ||||||||
Sbjct: 41 tggtccagctccgtgccgcacctccccgcgaacaccccctc 1
Score = 99.6 bits (50), Expect = 5e-019
Identities = 122/145 (84%), Gaps = 12/145 (8%)
Strand = Plus / Minus
Query: 26 tataataataaccgaatgaaatgaaagttgctggtacatcaactctcgac-----tggta 80
|||||||||||| |||||||| ||||| |||||||| ||||||||||||| |||||
Sbjct: 518 tataataataactgaatgaaacgaaagctgctggtagatcaactctcgactggtatggta 459
Query: 81 ttacatgaatgca-ggtgtacgatgtgcgtatgccattcagacattcacagtcggc---- 135
||||||||||||| | |||| ||||||||||| ||||||||||||| ||| | ||
Sbjct: 458 ttacatgaatgcacgttgtataatgtgcgtatgtcattcagacattctcagaccgcaaca 399
Query: 136 --gatgttcctgtccgagcatacat 158
|||||||||||||||||||||||
Sbjct: 398 gagatgttcctgtccgagcatacat 374
>gb|BE361524.1|BE361524 DG1_81_D12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 560
Score = 289 bits (146), Expect = 3e-076
Identities = 208/230 (90%), Gaps = 9/230 (3%)
Strand = Plus / Minus
Query: 880 tccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcgcgc 939
||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||
Sbjct: 560 tccttgacgtcggtgacggcgcccttctgcctccagtcgacggaggtcgggaggtcacgc 501
Query: 940 gcgtcggcgtacatgaacgacgacgccgacgccgaggagccctgcctgtcgccgcggaac 999
||| ||||||||||||| || ||||| ||| |||||||||||||||||||||
Sbjct: 500 gcgccggcgtacatgaaggaggacgc---------ggatccctgcctgtcgccgcggaac 450
Query: 1000 atgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggtcatg 1059
|||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 449 atgcggtggtgcgcgaccctggagccggcgtagtggcggcggaactcgtcggcggtcatg 390
Query: 1060 tcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 389 tcgccgaagcggttgaggcggagcttgtacggctcgtcccgctggttgaa 340
>gb|CD220854.1|CD220854 CCC1_69_A06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_69_A06_A007 5', mRNA sequence
Length = 546
Score = 280 bits (141), Expect = 3e-073
Identities = 203/225 (90%), Gaps = 9/225 (4%)
Strand = Plus / Minus
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcgcgcgcgtc 944
|||||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||| |
Sbjct: 546 gacgtcggtgacggcgcccttctgcctccagtcgacggaggtcgggaggtcacgcgcgcc 487
Query: 945 ggcgtacatgaacgacgacgccgacgccgaggagccctgcctgtcgccgcggaacatgcg 1004
|||||||||||| || ||||| ||| ||||||||||||||||||||||||||
Sbjct: 486 ggcgtacatgaaggaggacgc---------ggatccctgcctgtcgccgcggaacatgcg 436
Query: 1005 gtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcggtcatgtcgcc 1064
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 435 gtggtgcgcgaccctggagccggcgtagtggcggcggaactcgtcggcggtcatgtcgcc 376
Query: 1065 gaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 375 gaagcggttgaggcggagcttgtacggctcgtcccgctggttgaa 331
>gb|CD220759.1|CD220759 CCC1_69_A06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_69_A06_A007 3', mRNA sequence
Length = 435
Score = 274 bits (138), Expect = 2e-071
Identities = 183/198 (92%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 198 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 139
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 138 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 79
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttc 396
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 78 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccacgagttc 19
Query: 397 ttgaccagccagtacttg 414
|| |||| ||||||||||
Sbjct: 18 ttcaccacccagtacttg 1
Score = 99.6 bits (50), Expect = 5e-019
Identities = 122/145 (84%), Gaps = 12/145 (8%)
Strand = Plus / Minus
Query: 26 tataataataaccgaatgaaatgaaagttgctggtacatcaactctcgact-----ggta 80
|||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||||
Sbjct: 435 tataataataactgaatgaaacgaaagctgctggtagatcaactctcgactggtatggta 376
Query: 81 ttacatgaatgca-ggtgtacgatgtgcgtatgccattcagacattcacagtcggc---- 135
||||||||||||| | |||| ||||||||||| ||||||||||||| ||| | ||
Sbjct: 375 ttacatgaatgcacgttgtataatgtgcgtatgtcattcagacattctcagaccgcaaca 316
Query: 136 --gatgttcctgtccgagcatacat 158
|||||||||||||||||||||||
Sbjct: 315 gagatgttcctgtccgagcatacat 291
>gb|BF657020.1|BF657020 OV2_18_B08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 427
Score = 260 bits (131), Expect = 2e-067
Identities = 182/199 (91%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||| ||||||||| ||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 199 attcaaagctcgtcgaggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 140
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 139 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 80
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccacgagttc 396
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 79 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccacgagttc 20
Query: 397 ttgaccagccagtacttgg 415
|| |||| |||||||||||
Sbjct: 19 ttcaccacccagtacttgg 1
Score = 81.8 bits (41), Expect = 1e-013
Identities = 110/132 (83%), Gaps = 12/132 (9%)
Strand = Plus / Minus
Query: 39 gaatgaaatgaaagttgctggtacatcaactctcgactg-----gtattacatgaatgca 93
|||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||
Sbjct: 423 gaatgaaacgaaagctgctggtaaatcaactctcgactggtatggtattacatgaatgca 364
Query: 94 -ggtgtacgatgtgcgtatgccattcagacattcacagtcggc------gatgttcctgt 146
| |||| ||||||||||| ||||||||||||| ||| | || |||||||||||
Sbjct: 363 cgttgtataatgtgcgtatgtcattcagacattctcagaccgcaacagagatgttcctgt 304
Query: 147 ccgagcatacat 158
||||||||||||
Sbjct: 303 ccgagcatacat 292
>gb|CD228088.1|CD228088 CCC1_5_D03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_5_D03_A007 5', mRNA sequence
Length = 539
Score = 248 bits (125), Expect = 9e-064
Identities = 184/205 (89%), Gaps = 9/205 (4%)
Strand = Plus / Minus
Query: 905 tctgcctccagtcgacggaggccgggacgtcgcgcgcgtcggcgtacatgaacgacgacg 964
||||||||||||||||||||| ||||| ||| |||||| ||||||||||||| || ||||
Sbjct: 539 tctgcctccagtcgacggaggtcgggaggtcacgcgcgccggcgtacatgaaggaggacg 480
Query: 965 ccgacgccgaggagccctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagc 1024
| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 c---------ggatccctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagc 429
Query: 1025 ccgcgtagtggcgtcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagct 1084
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 cggcgtagtggcggcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagct 369
Query: 1085 tgtagggctcgtcccggcggttgaa 1109
|||| ||||||||||| |||||||
Sbjct: 368 tgtacggctcgtcccgctggttgaa 344
>gb|BG273338.1|BG273338 OV2_27_B05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 446
Score = 242 bits (122), Expect = 6e-062
Identities = 161/174 (92%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 174 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 115
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctccttggcg 336
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 114 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtggccctccttcgcg 55
Query: 337 gccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 54 gccacatcgcgcgccatgcggatgtaccccttctccccccactcgggtccccac 1
Score = 103 bits (52), Expect = 3e-020
Identities = 124/147 (84%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 24 aatataataataaccgaatgaaatgaaagttgctggtacatcaactctcgact-----gg 78
|||||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 413 aatataataataactgaatgaaacgaaagctgctggtagatcaactctcgactggtatgg 354
Query: 79 tattacatgaatgca-ggtgtacgatgtgcgtatgccattcagacattcacagtcggc-- 135
||||||||||||||| | |||| ||||||||||| ||||||||||||| ||| | ||
Sbjct: 353 tattacatgaatgcacgttgtataatgtgcgtatgtcattcagacattctcagaccgcaa 294
Query: 136 ----gatgttcctgtccgagcatacat 158
|||||||||||||||||||||||
Sbjct: 293 cagagatgttcctgtccgagcatacat 267
>gb|BE362337.1|BE362337 DG1_86_B04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 518
Score = 234 bits (118), Expect = 1e-059
Identities = 177/198 (89%), Gaps = 9/198 (4%)
Strand = Plus / Minus
Query: 912 ccagtcgacggaggccgggacgtcgcgcgcgtcggcgtacatgaacgacgacgccgacgc 971
|||||||||||||| ||||| ||| |||||| ||||||||||||| || |||||
Sbjct: 518 ccagtcgacggaggtcgggaggtcacgcgcgccggcgtacatgaaggaggacgc------ 465
Query: 972 cgaggagccctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagcccgcgta 1031
||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 464 ---ggatccctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagccggcgta 408
Query: 1032 gtggcgtcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtaggg 1091
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 407 gtggcggcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtacgg 348
Query: 1092 ctcgtcccggcggttgaa 1109
||||||||| |||||||
Sbjct: 347 ctcgtcccgctggttgaa 330
>gb|BE356876.1|BE356876 DG1_145_A01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 491
Score = 214 bits (108), Expect = 1e-053
Identities = 173/196 (88%), Gaps = 9/196 (4%)
Strand = Plus / Minus
Query: 914 agtcgacggaggccgggacgtcgcgcgcgtcggcgtacatgaacgacgacgccgacgccg 973
||||| |||||| ||||| ||| |||||| ||||||||||||| || |||||
Sbjct: 491 agtcgccggaggtcgggaggtcacgcgcgccggcgtacatgaaggaggacgc-------- 440
Query: 974 aggagccctgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagt 1033
||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 439 -ggatccatgcctgtcgccgcggaacatgcggtggtgcgcgaccctggagccggcgtagt 381
Query: 1034 ggcgtcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggct 1093
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 380 ggcgacggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtacggct 321
Query: 1094 cgtcccggcggttgaa 1109
||||||| |||||||
Sbjct: 320 cgtcccgctggttgaa 305
>gb|CW343408.1|CW343408 104_845_11487405_148_36186_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11487405, DNA
sequence
Length = 679
Score = 151 bits (76), Expect = 2e-034
Identities = 91/96 (94%)
Strand = Plus / Plus
Query: 1014 gaccctggagcccgcgtagtggcgtcggaactcgtcggcggtcatgtcgccgaagcggtt 1073
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1 gaccctggagccggcgtagtggcggcggaactcgtcggcggtcatgtcgccgaagcggtt 60
Query: 1074 gaggcggagcttgtagggctcgtcccggcggttgaa 1109
||||||||||||||| ||||||||||| |||||||
Sbjct: 61 gaggcggagcttgtacggctcgtcccgctggttgaa 96
>gb|AW923276.1|AW923276 DG1_50_F04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 329
Score = 149 bits (75), Expect = 7e-034
Identities = 99/107 (92%)
Strand = Plus / Minus
Query: 217 attcagagctcgtcgtggctggagccgtcctcgtcgacgacggcgtggaccttggggttg 276
||||||||||||||||||||| | |||| || ||||||||||| ||||||||||||||
Sbjct: 111 attcagagctcgtcgtggctgtcgtcgtcgccgacgacgacggcgcggaccttggggttg 52
Query: 277 ggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtg 323
||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 51 ggcgaggtcttgacggggtaggacgcctccatggcgatgccgcagtg 5
Score = 71.9 bits (36), Expect = 1e-010
Identities = 102/123 (82%), Gaps = 12/123 (9%)
Strand = Plus / Minus
Query: 48 gaaagttgctggtacatcaactctcgactg-----gtattacatgaatgca-ggtgtacg 101
||||| |||||||| ||||||||||||||| |||||||||||||||| | ||||
Sbjct: 326 gaaagctgctggtagatcaactctcgactggtatggtattacatgaatgcacgttgtata 267
Query: 102 atgtgcgtatgccattcagacattcacagtcggc------gatgttcctgtccgagcata 155
||||||||||| ||||||||||||| ||| | || ||||||||||||||||||||
Sbjct: 266 atgtgcgtatgtcattcagacattctcagaccgcaacagagatgttcctgtccgagcata 207
Query: 156 cat 158
|||
Sbjct: 206 cat 204
>gb|BF657518.1|BF657518 OV2_23_B10.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 411
Score = 123 bits (62), Expect = 4e-026
Identities = 74/78 (94%)
Strand = Plus / Minus
Query: 1032 gtggcgtcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtaggg 1091
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 411 gtggcggcggaactcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtacgg 352
Query: 1092 ctcgtcccggcggttgaa 1109
||||||||| |||||||
Sbjct: 351 ctcgtcccgctggttgaa 334
>gb|CW163652.1|CW163652 104_571_11151575_148_36454_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11151575, DNA
sequence
Length = 646
Score = 121 bits (61), Expect = 1e-025
Identities = 97/109 (88%)
Strand = Plus / Minus
Query: 761 tgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgt 820
||||||||||||||||||||||||||||||||| | ||||||| | ||| ||| ||||
Sbjct: 455 tgtcgcagtccaccagctgctgctccgacagcggcaccaggttccttgtccggatggcgt 396
Query: 821 tgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgca 869
||||||||||||| || ||||||| |||||||||||||||||| |||||
Sbjct: 395 tgatgccctccaccgccgcgatcgccgagaacgcccagcagctcccgca 347
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 1041 gaactcgtcggcggtcatgtcgccgaagcggttgaggc 1078
|||||| ||| |||||||||||| ||||||||||||||
Sbjct: 142 gaactcctcgtcggtcatgtcgctgaagcggttgaggc 105
>gb|CW265142.1|CW265142 104_734_11231699_116_35259_044 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231699, DNA
sequence
Length = 620
Score = 121 bits (61), Expect = 1e-025
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 761 tgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgt 820
||||||||||||||||||||||||||||||||| | ||||||| | ||| ||| ||||
Sbjct: 380 tgtcgcagtccaccagctgctgctccgacagcggcaccaggttccttgtccggatggcgt 439
Query: 821 tgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgca 869
||||||||||||| || ||||||| |||||||||||||||||| |||||
Sbjct: 440 tgatgccctccaccgccgcgatcgccgagaacgcccagcagctcccgca 488
>gb|CW428753.1|CW428753 fsbb001f141k04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f141k04, DNA
sequence
Length = 780
Score = 121 bits (61), Expect = 1e-025
Identities = 97/109 (88%)
Strand = Plus / Plus
Query: 761 tgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgt 820
||||||||||||||||||||||||||||||||| | ||||||| | ||| ||| ||||
Sbjct: 53 tgtcgcagtccaccagctgctgctccgacagcggcaccaggttccttgtccggatggcgt 112
Query: 821 tgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgca 869
||||||||||||| || ||||||| |||||||||||||||||| |||||
Sbjct: 113 tgatgccctccaccgccgcgatcgccgagaacgcccagcagctcccgca 161
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1041 gaactcgtcggcggtcatgtcgccgaagcggttgaggc 1078
|||||| ||| |||||||||||| ||||||||||||||
Sbjct: 366 gaactcctcgtcggtcatgtcgctgaagcggttgaggc 403
>gb|CD224053.1|CD224053 CCC1_31_A07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_A07_A007 5', mRNA sequence
Length = 638
Score = 121 bits (61), Expect = 1e-025
Identities = 136/161 (84%)
Strand = Plus / Minus
Query: 762 gtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgtt 821
|||||||||||| |||| |||||||||||||||| ||| ||| |||| ||||| |||
Sbjct: 636 gtcgcagtccacaagctcctgctccgacagcgacaccagcttcccggtcctgatcttgtt 577
Query: 822 gatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtc 881
|||||||| || || ||||| |||||||||||||||||||| ||||| ||||| |||||
Sbjct: 576 tatgccctctacagctgcgatggtcgagaacgcccagcagctcccgcactggccttggtc 517
Query: 882 cttgacgtcggtgacagcgcccttctgcctccagtcgacgg 922
||||| | ||||||| |||||| ||||| |||||| ||||
Sbjct: 516 cttgatgccggtgaccgcgccccactgccgccagtccacgg 476
>gb|CL189948.1|CL189948 104_407_10905735_114_32477_054 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905735, DNA
sequence
Length = 728
Score = 109 bits (55), Expect = 6e-022
Identities = 133/159 (83%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||
Sbjct: 269 gatgtactggaacgcatagtccatgaggccaccgttgcagccttggttgtcgacgtcgtc 210
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
||||||||| |||| |||||||||||||||| ||| ||| |||| ||||| ||| ||
Sbjct: 209 gcagtccacgagctcctgctccgacagcgacaccagcttcccggtcctgatcttgtttat 150
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagct 863
|||||| || || ||||| ||||||||||||||||||||
Sbjct: 149 gccctctacagctgcgatggtcgagaacgcccagcagct 111
>gb|CL189949.1|CL189949 104_407_10905735_116_32481_054 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10905735, DNA
sequence
Length = 721
Score = 109 bits (55), Expect = 6e-022
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||
Sbjct: 460 gatgtactggaacgcatagtccatgaggccaccgttgcagccttggttgtcgacgtcgtc 519
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
||||||||| |||| |||||||||||||||| ||| ||| |||| ||||| ||| ||
Sbjct: 520 gcagtccacgagctcctgctccgacagcgacaccagcttcccggtcctgatcttgtttat 579
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagct 863
|||||| || || ||||| ||||||||||||||||||||
Sbjct: 580 gccctctacagctgcgatggtcgagaacgcccagcagct 618
>gb|CW216094.1|CW216094 104_648_11194930_116_37120_035 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194930, DNA
sequence
Length = 573
Score = 109 bits (55), Expect = 6e-022
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||
Sbjct: 215 gatgtactggaacgcatagtccatgaggccaccgttgcagccttggttgtcgacgtcgtc 274
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
||||||||| |||| |||||||||||||||| ||| ||| |||| ||||| ||| ||
Sbjct: 275 gcagtccacgagctcctgctccgacagcgacaccagcttcccggtcctgatcttgtttat 334
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagct 863
|||||| || || ||||| ||||||||||||||||||||
Sbjct: 335 gccctctacagctgcgatggtcgagaacgcccagcagct 373
>gb|CW220225.1|CW220225 104_654_11197238_148_37151_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197238, DNA
sequence
Length = 645
Score = 109 bits (55), Expect = 6e-022
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||
Sbjct: 242 gatgtactggaacgcatagtccatgaggccaccgttgcagccttggttgtcgacgtcgtc 301
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
||||||||| |||| |||||||||||||||| ||| ||| |||| ||||| ||| ||
Sbjct: 302 gcagtccacgagctcctgctccgacagcgacaccagcttcccggtcctgatcttgtttat 361
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagct 863
|||||| || || ||||| ||||||||||||||||||||
Sbjct: 362 gccctctacagctgcgatggtcgagaacgcccagcagct 400
>gb|CW230934.1|CW230934 104_680_11210859_148_37339_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11210859, DNA
sequence
Length = 669
Score = 109 bits (55), Expect = 6e-022
Identities = 133/159 (83%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||
Sbjct: 391 gatgtactggaacgcatagtccatgaggccaccgttgcagccttggttgtcgacgtcgtc 332
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
||||||||| |||| |||||||||||||||| ||| ||| |||| ||||| ||| ||
Sbjct: 331 gcagtccacgagctcctgctccgacagcgacaccagcttcccggtcctgatcttgtttat 272
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagct 863
|||||| || || ||||| ||||||||||||||||||||
Sbjct: 271 gccctctacagctgcgatggtcgagaacgcccagcagct 233
>gb|CW296838.1|CW296838 104_778_11461727_116_35630_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461727, DNA
sequence
Length = 592
Score = 109 bits (55), Expect = 6e-022
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||
Sbjct: 116 gatgtactggaacgcatagtccatgaggccaccgttgcagccttggttgtcgacgtcgtc 175
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
||||||||| |||| |||||||||||||||| ||| ||| |||| ||||| ||| ||
Sbjct: 176 gcagtccacgagctcctgctccgacagcgacaccagcttcccggtcctgatcttgtttat 235
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagct 863
|||||| || || ||||| ||||||||||||||||||||
Sbjct: 236 gccctctacagctgcgatggtcgagaacgcccagcagct 274
>gb|CW303448.1|CW303448 104_788_11465244_116_35692_048 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465244, DNA
sequence
Length = 673
Score = 109 bits (55), Expect = 6e-022
Identities = 133/159 (83%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
||||||||||||||| |||||||||||||| ||||||||||| |||| | | |||
Sbjct: 211 gatgtactggaacgcatagtccatgaggccaccgttgcagccttggttgtcgacgtcgtc 152
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
||||||||| |||| |||||||||||||||| ||| ||| |||| ||||| ||| ||
Sbjct: 151 gcagtccacgagctcctgctccgacagcgacaccagcttcccggtcctgatcttgtttat 92
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagct 863
|||||| || || ||||| ||||||||||||||||||||
Sbjct: 91 gccctctacagctgcgatggtcgagaacgcccagcagct 53
>gb|BG048347.1|BG048347 OV1_13_A08.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 259
Score = 103 bits (52), Expect = 3e-020
Identities = 124/147 (84%), Gaps = 12/147 (8%)
Strand = Plus / Minus
Query: 24 aatataataataaccgaatgaaatgaaagttgctggtacatcaactctcgact-----gg 78
|||||||||||||| |||||||| ||||| |||||||| |||||||||||||| ||
Sbjct: 233 aatataataataactgaatgaaacgaaagctgctggtagatcaactctcgactggtatgg 174
Query: 79 tattacatgaatgca-ggtgtacgatgtgcgtatgccattcagacattcacagtcggc-- 135
||||||||||||||| | |||| ||||||||||| ||||||||||||| ||| | ||
Sbjct: 173 tattacatgaatgcacgttgtataatgtgcgtatgtcattcagacattctcagaccgcaa 114
Query: 136 ----gatgttcctgtccgagcatacat 158
|||||||||||||||||||||||
Sbjct: 113 cagagatgttcctgtccgagcatacat 87
>gb|BG053668.1|BG053668 RHIZ2_8_C07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 478
Score = 103 bits (52), Expect = 3e-020
Identities = 154/188 (81%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
|||||||||||||||||||||||||||||| |||| | | ||||||||||| | |||
Sbjct: 282 gcgtagtccatgaggcccccgttgcagccgttgttgccgtccgtgtcgcagtcgatgagc 223
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||||| ||||||||| ||| |||| ||||||||| ||||||||
Sbjct: 222 tcctgctccgacagcgccgtcaggttgcccgtcacgatctggttgatgccatccacggcc 163
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||| ||||| ||||||||||| ||||| || ||||||| ||| || |||| ||
Sbjct: 162 gccaccgtggagaaggcccagcagctgccgcactgcccctggttcttcaccccggtcacc 103
Query: 898 gcgccctt 905
||||||||
Sbjct: 102 gcgccctt 95
>gb|CW031141.1|CW031141 104_259_10500633_114_30397 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500633, DNA
sequence
Length = 834
Score = 99.6 bits (50), Expect = 5e-019
Identities = 165/201 (82%), Gaps = 3/201 (1%)
Strand = Plus / Minus
Query: 369 ctcgccccactcggggccccacgagttcttgaccagccagtacttggtgccgtc--cg-c 425
|||||||||| ||| ||||||||||||||||| | |||||| |||||||| || |
Sbjct: 682 ctcgccccacgagggtccccacgagttcttgacgatccagtagggcgtgccgtcgacgtc 623
Query: 426 ggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccgga 485
| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 622 gctgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgt 563
Query: 486 gaagaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacac 545
||| || ||||| ||||||||||||||| | ||| | || |||||||| ||||||||
Sbjct: 562 gaacacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacac 503
Query: 546 gggctggtgcgccaccgcctt 566
|||||| |||||||||||||
Sbjct: 502 cggctggcgcgccaccgcctt 482
Score = 99.6 bits (50), Expect = 5e-019
Identities = 161/198 (81%)
Strand = Plus / Minus
Query: 760 gtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcg 819
||||||||||| ||||||| |||||||||||||||| |||| || ||| |||||||
Sbjct: 279 gtgtcgcagtcgaccagctcctgctccgacagcgacaccaggctccccgtccggatcgcg 220
Query: 820 ttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctgg 879
|||||||| |||||||| | | ||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 219 ttgatgccttccacggccaccaccgtggagaaggcccagcagctgccgcagcggccctgg 160
Query: 880 tccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcgcgc 939
| ||||||| |||| || ||||| | ||| | |||||| ||||| ||| ||||||
Sbjct: 159 ttcttgacggcggtcaccgcgccatgctgacgccagtccacggaccgcggcacgtcggtg 100
Query: 940 gcgtcggcgtacatgaac 957
|||||| |||||||||||
Sbjct: 99 gcgtcgtcgtacatgaac 82
Score = 69.9 bits (35), Expect = 5e-010
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
|||||| |||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 777 gggttgtgcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 727
>gb|CW031142.1|CW031142 104_259_10500633_116_30398 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10500633, DNA
sequence
Length = 674
Score = 99.6 bits (50), Expect = 5e-019
Identities = 165/201 (82%), Gaps = 3/201 (1%)
Strand = Plus / Plus
Query: 369 ctcgccccactcggggccccacgagttcttgaccagccagtacttggtgccgtc--cg-c 425
|||||||||| ||| ||||||||||||||||| | |||||| |||||||| || |
Sbjct: 274 ctcgccccacgagggtccccacgagttcttgacgatccagtagggcgtgccgtcgacgtc 333
Query: 426 ggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccgga 485
| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 334 gctgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgt 393
Query: 486 gaagaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacac 545
||| || ||||| ||||||||||||||| | ||| | || |||||||| ||||||||
Sbjct: 394 gaacacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacac 453
Query: 546 gggctggtgcgccaccgcctt 566
|||||| |||||||||||||
Sbjct: 454 cggctggcgcgccaccgcctt 474
Score = 69.9 bits (35), Expect = 5e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
|||||| |||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 179 gggttgtgcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 229
>gb|CW165466.1|CW165466 104_573_11152520_116_36471_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152520, DNA
sequence
Length = 558
Score = 99.6 bits (50), Expect = 5e-019
Identities = 161/198 (81%)
Strand = Plus / Minus
Query: 760 gtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcg 819
||||||||||| ||||||| |||||||||||||||| |||| || ||| |||||||
Sbjct: 487 gtgtcgcagtcgaccagctcctgctccgacagcgacaccaggctccccgtccggatcgcg 428
Query: 820 ttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctgg 879
|||||||| |||||||| | | ||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 427 ttgatgccttccacggccaccaccgtggagaaggcccagcagctgccgcagcggccctgg 368
Query: 880 tccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcgcgc 939
| ||||||| |||| || ||||| | ||| | |||||| ||||| ||| ||||||
Sbjct: 367 ttcttgacggcggtcaccgcgccatgctgacgccagtccacggaccgcggcacgtcggtg 308
Query: 940 gcgtcggcgtacatgaac 957
|||||| |||||||||||
Sbjct: 307 gcgtcgtcgtacatgaac 290
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggag 1082
|||||||| |||| | |||||||||||||||||| ||||||||
Sbjct: 211 cggaactcctcggggcccatgtcgccgaagcggttcaggcggag 168
>gb|CW165467.1|CW165467 104_573_11152520_148_36474_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11152520, DNA
sequence
Length = 681
Score = 99.6 bits (50), Expect = 5e-019
Identities = 165/201 (82%), Gaps = 3/201 (1%)
Strand = Plus / Plus
Query: 369 ctcgccccactcggggccccacgagttcttgaccagccagtacttggtgccgtc--cg-c 425
|||||||||| ||| ||||||||||||||||| | |||||| |||||||| || |
Sbjct: 395 ctcgccccacgagggtccccacgagttcttgacgatccagtagggcgtgccgtcgacgtc 454
Query: 426 ggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccgga 485
| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 455 gctgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgt 514
Query: 486 gaagaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacac 545
||| || ||||| ||||||||||||||| | ||| | || |||||||| ||||||||
Sbjct: 515 gaacacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacac 574
Query: 546 gggctggtgcgccaccgcctt 566
|||||| |||||||||||||
Sbjct: 575 cggctggcgcgccaccgcctt 595
Score = 69.9 bits (35), Expect = 5e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
|||||| |||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 300 gggttgtgcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 350
>gb|CW270328.1|CW270328 104_741_11402351_116_35324_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402351, DNA
sequence
Length = 683
Score = 99.6 bits (50), Expect = 5e-019
Identities = 165/201 (82%), Gaps = 3/201 (1%)
Strand = Plus / Plus
Query: 369 ctcgccccactcggggccccacgagttcttgaccagccagtacttggtgccgtc--cg-c 425
|||||||||| ||| ||||||||||||||||| | |||||| |||||||| || |
Sbjct: 397 ctcgccccacgagggtccccacgagttcttgacgatccagtagggcgtgccgtcgacgtc 456
Query: 426 ggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccgga 485
| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 457 gctgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgt 516
Query: 486 gaagaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacac 545
||| || ||||| ||||||||||||||| | ||| | || |||||||| ||||||||
Sbjct: 517 gaacacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacac 576
Query: 546 gggctggtgcgccaccgcctt 566
|||||| |||||||||||||
Sbjct: 577 cggctggcgcgccaccgcctt 597
Score = 69.9 bits (35), Expect = 5e-010
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
|||||| |||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 302 gggttgtgcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 352
>gb|CW411512.1|CW411512 fsbb001f106l13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f106l13, DNA
sequence
Length = 612
Score = 99.6 bits (50), Expect = 5e-019
Identities = 161/198 (81%)
Strand = Plus / Plus
Query: 760 gtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcg 819
||||||||||| ||||||| |||||||||||||||| |||| || ||| |||||||
Sbjct: 299 gtgtcgcagtcgaccagctcctgctccgacagcgacaccaggctccccgtccggatcgcg 358
Query: 820 ttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctgg 879
|||||||| |||||||| | | ||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 359 ttgatgccttccacggccaccaccgtggagaaggcccagcagctgccgcagcggccctgg 418
Query: 880 tccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcgcgc 939
| ||||||| |||| || ||||| | ||| | |||||| ||||| ||| ||||||
Sbjct: 419 ttcttgacggcggtcaccgcgccatgctgacgccagtccacggaccgcggcacgtcggtg 478
Query: 940 gcgtcggcgtacatgaac 957
|||||| |||||||||||
Sbjct: 479 gcgtcgtcgtacatgaac 496
Score = 52.0 bits (26), Expect = 1e-004
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 529 tcgatggcgacggacacgggctggtgcgccaccgcctt 566
|||||||| |||||||| |||||| |||||||||||||
Sbjct: 59 tcgatggccacggacaccggctggcgcgccaccgcctt 96
>gb|CW501703.1|CW501703 fsbb001f297k14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f297k14, DNA
sequence
Length = 742
Score = 99.6 bits (50), Expect = 5e-019
Identities = 161/198 (81%)
Strand = Plus / Minus
Query: 760 gtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcg 819
||||||||||| ||||||| |||||||||||||||| |||| || ||| |||||||
Sbjct: 390 gtgtcgcagtcgaccagctcctgctccgacagcgacaccaggctccccgtccggatcgcg 331
Query: 820 ttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctgg 879
|||||||| |||||||| | | ||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 330 ttgatgccttccacggccaccaccgtggagaaggcccagcagctgccgcagcggccctgg 271
Query: 880 tccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcgcgc 939
| ||||||| |||| || ||||| | ||| | |||||| ||||| ||| ||||||
Sbjct: 270 ttcttgacggcggtcaccgcgccatgctgacgccagtccacggaccgcggcacgtcggtg 211
Query: 940 gcgtcggcgtacatgaac 957
|||||| |||||||||||
Sbjct: 210 gcgtcgtcgtacatgaac 193
Score = 93.7 bits (47), Expect = 3e-017
Identities = 116/139 (83%)
Strand = Plus / Minus
Query: 428 tgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccggaga 487
|||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| | ||
Sbjct: 731 tgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgtga 672
Query: 488 agaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacacgg 547
| || ||||| ||||||||||||||| | ||| | || |||||||| |||||||| |
Sbjct: 671 acacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacaccg 612
Query: 548 gctggtgcgccaccgcctt 566
||||| |||||||||||||
Sbjct: 611 gctggcgcgccaccgcctt 593
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggag 1082
|||||||| |||| | |||||||||||||||||| ||||||||
Sbjct: 114 cggaactcctcggggcccatgtcgccgaagcggttcaggcggag 71
>gb|BE125214.1|BE125214 DG1_16_H11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 99.6 bits (50), Expect = 5e-019
Identities = 161/198 (81%)
Strand = Plus / Minus
Query: 760 gtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcg 819
||||||||||| ||||||| |||||||||||||||| |||| || ||| |||||||
Sbjct: 457 gtgtcgcagtcgaccagctcctgctccgacagcgacaccaggctccccgtccggatcgcg 398
Query: 820 ttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctgg 879
|||||||| |||||||| | | ||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 397 ttgatgccttccacggccaccaccgtggagaaggcccagcagctgccgcagcggccctgg 338
Query: 880 tccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcgcgc 939
| ||||||| |||| || ||||| | ||| | |||||| ||||| ||| ||||||
Sbjct: 337 ttcttgacggcggtcaccgcgccatgctgacgccagtccacggaccgcggcacgtcggtg 278
Query: 940 gcgtcggcgtacatgaac 957
|||||| |||||||||||
Sbjct: 277 gcgtcgtcgtacatgaac 260
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggag 1082
|||||||| |||| | |||||||||||||||||| ||||||||
Sbjct: 181 cggaactcctcggggcccatgtcgccgaagcggttcaggcggag 138
>gb|BE358196.1|BE358196 DG1_26_C08.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 623
Score = 99.6 bits (50), Expect = 5e-019
Identities = 161/198 (81%)
Strand = Plus / Minus
Query: 760 gtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcg 819
||||||||||| ||||||| |||||||||||||||| |||| || ||| |||||||
Sbjct: 461 gtgtcgcagtcgaccagctcctgctccgacagcgacaccaggctccccgtccggatcgcg 402
Query: 820 ttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctgg 879
|||||||| |||||||| | | ||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 401 ttgatgccttccacggccaccaccgtggagaaggcccagcagctgccgcagcggccctgg 342
Query: 880 tccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcgcgc 939
| ||||||| |||| || ||||| | ||| | |||||| ||||| ||| ||||||
Sbjct: 341 ttcttgacggcggtcaccgcgccatgctgacgccagtccacggaccgcggcacgtcggtg 282
Query: 940 gcgtcggcgtacatgaac 957
|||||| |||||||||||
Sbjct: 281 gcgtcgtcgtacatgaac 264
Score = 48.1 bits (24), Expect = 0.002
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 1039 cggaactcgtcggcggtcatgtcgccgaagcggttgaggcggag 1082
|||||||| |||| | |||||||||||||||||| ||||||||
Sbjct: 185 cggaactcctcggggcccatgtcgccgaagcggttcaggcggag 142
>gb|BE359044.1|BE359044 DG1_38_B01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 533
Score = 99.6 bits (50), Expect = 5e-019
Identities = 165/201 (82%), Gaps = 3/201 (1%)
Strand = Plus / Minus
Query: 369 ctcgccccactcggggccccacgagttcttgaccagccagtacttggtgccgtc--cg-c 425
|||||||||| ||| ||||||||||||||||| | |||||| |||||||| || |
Sbjct: 298 ctcgccccacgagggtccccacgagttcttgacgatccagtagggcgtgccgtcgacgtc 239
Query: 426 ggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccgga 485
| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 238 gctgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgt 179
Query: 486 gaagaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacac 545
||| || ||||| ||||||||||||||| | ||| | || |||||||| ||||||||
Sbjct: 178 gaacacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacac 119
Query: 546 gggctggtgcgccaccgcctt 566
|||||| |||||||||||||
Sbjct: 118 cggctggcgcgccaccgcctt 98
Score = 69.9 bits (35), Expect = 5e-010
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
|||||| |||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 393 gggttgtgcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 343
>gb|BE359118.1|BE359118 DG1_38_B01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 615
Score = 99.6 bits (50), Expect = 5e-019
Identities = 165/201 (82%), Gaps = 3/201 (1%)
Strand = Plus / Minus
Query: 369 ctcgccccactcggggccccacgagttcttgaccagccagtacttggtgccgtc--cg-c 425
|||||||||| ||| ||||||||||||||||| | |||||| |||||||| || |
Sbjct: 203 ctcgccccacgagggtccccacgagttcttgacgatccagtagggcgtgccgtcgacgtc 144
Query: 426 ggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccgga 485
| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 143 gctgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgt 84
Query: 486 gaagaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacac 545
||| || ||||| ||||||||||||||| | ||| | || |||||||| ||||||||
Sbjct: 83 gaacacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacac 24
Query: 546 gggctggtgcgccaccgcctt 566
|||||| |||||||||||||
Sbjct: 23 cggctggcgcgccaccgcctt 3
Score = 69.9 bits (35), Expect = 5e-010
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
|||||| |||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 298 gggttgtgcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 248
>gb|BE360622.1|BE360622 DG1_64_G02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 673
Score = 99.6 bits (50), Expect = 5e-019
Identities = 152/186 (81%)
Strand = Plus / Minus
Query: 381 ggggccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagcc 440
|||||||||||||||||| || | |||||| |||||||| || |||| ||||||||
Sbjct: 222 ggggccccacgagttcttcacgatccagtaggccgtgccgtcgtcgctgacgccgtagcc 163
Query: 441 gaccgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcgga 500
|||||||||||||||||||||||| ||||| ||||| ||| | ||| || ||||| ||
Sbjct: 162 gaccgccgcgacgccgtggtccaggtccgtgccgcagtcgcccgtgaacacgccctccga 103
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||| | ||| | || |||||||| |||||||| ||||||| ||||||
Sbjct: 102 gtagaactggaacgcctggccacccgcgtcgatggccacggacaccggctggttcgccac 43
Query: 561 cgcctt 566
|||||
Sbjct: 42 ggcctt 37
Score = 77.8 bits (39), Expect = 2e-012
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 329 gggttgggcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 279
>gb|BE362011.1|BE362011 DG1_83_G04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 665
Score = 99.6 bits (50), Expect = 5e-019
Identities = 152/186 (81%)
Strand = Plus / Minus
Query: 381 ggggccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagcc 440
|||||||||||||||||| || | |||||| |||||||| || |||| ||||||||
Sbjct: 229 ggggccccacgagttcttcacgatccagtaggccgtgccgtcgtcgctgacgccgtagcc 170
Query: 441 gaccgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcgga 500
|||||||||||||||||||||||| ||||| ||||| ||| | ||| || ||||| ||
Sbjct: 169 gaccgccgcgacgccgtggtccaggtccgtgccgcagtcgcccgtgaacacgccctccga 110
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||| | ||| | || |||||||| |||||||| ||||||| ||||||
Sbjct: 109 gtagaactggaacgcctggccacccgcgtcgatggccacggacaccggctggttcgccac 50
Query: 561 cgcctt 566
|||||
Sbjct: 49 ggcctt 44
Score = 77.8 bits (39), Expect = 2e-012
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 336 gggttgggcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 286
>gb|BG355798.1|BG355798 EM1_16_H05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 671
Score = 99.6 bits (50), Expect = 5e-019
Identities = 152/186 (81%)
Strand = Plus / Minus
Query: 381 ggggccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagcc 440
|||||||||||||||||| || | |||||| |||||||| || |||| ||||||||
Sbjct: 206 ggggccccacgagttcttcacgatccagtaggccgtgccgtcgtcgctgacgccgtagcc 147
Query: 441 gaccgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcgga 500
|||||||||||||||||||||||| ||||| ||||| ||| | ||| || ||||| ||
Sbjct: 146 gaccgccgcgacgccgtggtccaggtccgtgccgcagtcgcccgtgaacacgccctccga 87
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||| | ||| | || |||||||| |||||||| ||||||| ||||||
Sbjct: 86 gtagaactggaacgcctggccacccgcgtcgatggccacggacaccggctggttcgccac 27
Query: 561 cgcctt 566
|||||
Sbjct: 26 ggcctt 21
Score = 77.8 bits (39), Expect = 2e-012
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 313 gggttgggcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 263
>gb|BG464460.1|BG464460 EM1_70_A09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 692
Score = 99.6 bits (50), Expect = 5e-019
Identities = 152/186 (81%)
Strand = Plus / Minus
Query: 381 ggggccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagcc 440
|||||||||||||||||| || | |||||| |||||||| || |||| ||||||||
Sbjct: 198 ggggccccacgagttcttcacgatccagtaggccgtgccgtcgtcgctgacgccgtagcc 139
Query: 441 gaccgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcgga 500
|||||||||||||||||||||||| ||||| ||||| ||| | ||| || ||||| ||
Sbjct: 138 gaccgccgcgacgccgtggtccaggtccgtgccgcagtcgcccgtgaacacgccctccga 79
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||| | ||| | || |||||||| |||||||| ||||||| ||||||
Sbjct: 78 gtagaactggaacgcctggccacccgcgtcgatggccacggacaccggctggttcgccac 19
Query: 561 cgcctt 566
|||||
Sbjct: 18 ggcctt 13
Score = 77.8 bits (39), Expect = 2e-012
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 305 gggttgggcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 255
>gb|BG464494.1|BG464494 EM1_70_D12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 704
Score = 99.6 bits (50), Expect = 5e-019
Identities = 165/201 (82%), Gaps = 3/201 (1%)
Strand = Plus / Minus
Query: 369 ctcgccccactcggggccccacgagttcttgaccagccagtacttggtgccgtc--cg-c 425
|||||||||| ||| ||||||||||||||||| | |||||| |||||||| || |
Sbjct: 243 ctcgccccacgagggtccccacgagttcttgacgatccagtagggcgtgccgtcgacgtc 184
Query: 426 ggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccgga 485
| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 183 gctgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgt 124
Query: 486 gaagaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacac 545
||| || ||||| ||||||||||||||| | ||| | || |||||||| ||||||||
Sbjct: 123 gaacacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacac 64
Query: 546 gggctggtgcgccaccgcctt 566
|||||| |||||||||||||
Sbjct: 63 cggctggcgcgccaccgcctt 43
Score = 69.9 bits (35), Expect = 5e-010
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
|||||| |||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 338 gggttgtgcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 288
>gb|BG487644.1|BG487644 EM1_65_E09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 657
Score = 99.6 bits (50), Expect = 5e-019
Identities = 152/186 (81%)
Strand = Plus / Minus
Query: 381 ggggccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagcc 440
|||||||||||||||||| || | |||||| |||||||| || |||| ||||||||
Sbjct: 217 ggggccccacgagttcttcacgatccagtaggccgtgccgtcgtcgctgacgccgtagcc 158
Query: 441 gaccgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcgga 500
|||||||||||||||||||||||| ||||| ||||| ||| | ||| || ||||| ||
Sbjct: 157 gaccgccgcgacgccgtggtccaggtccgtgccgcagtcgcccgtgaacacgccctccga 98
Query: 501 gtagaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccac 560
|||||||||||| | ||| | || |||||||| |||||||| ||||||| ||||||
Sbjct: 97 gtagaactggaacgcctggccacccgcgtcgatggccacggacaccggctggttcgccac 38
Query: 561 cgcctt 566
|||||
Sbjct: 37 ggcctt 32
Score = 77.8 bits (39), Expect = 2e-012
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 324 gggttgggcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 274
>gb|BG355923.2|BG355923 EM1_18_C12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 696
Score = 99.6 bits (50), Expect = 5e-019
Identities = 165/201 (82%), Gaps = 3/201 (1%)
Strand = Plus / Minus
Query: 369 ctcgccccactcggggccccacgagttcttgaccagccagtacttggtgccgtc--cg-c 425
|||||||||| ||| ||||||||||||||||| | |||||| |||||||| || |
Sbjct: 294 ctcgccccacgagggtccccacgagttcttgacgatccagtagggcgtgccgtcgacgtc 235
Query: 426 ggtgaccccgtagccgaccgccgcgacgccgtggtccagctccgtcccgcacctgccgga 485
| |||| |||||||||||| ||||||||||||||||||| ||||| ||||| ||| |
Sbjct: 234 gctgacgccgtagccgaccaccgcgacgccgtggtccaggtccgtgccgcagtcgcccgt 175
Query: 486 gaagaccccctcggagtagaactggaagtgcgagccgctggcctcgatggcgacggacac 545
||| || ||||| ||||||||||||||| | ||| | || |||||||| ||||||||
Sbjct: 174 gaacacgccctccgagtagaactggaaggcctggccccccgcgtcgatggccacggacac 115
Query: 546 gggctggtgcgccaccgcctt 566
|||||| |||||||||||||
Sbjct: 114 cggctggcgcgccaccgcctt 94
Score = 69.9 bits (35), Expect = 5e-010
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcag 321
|||||| |||||||||||| |||| |||| |||||||||||||||||||||
Sbjct: 389 gggttgtgcgaggtcttgatggggaaggacgcctccatggcgatgccgcag 339
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 387,699
Number of Sequences: 832831
Number of extensions: 387699
Number of successful extensions: 116559
Number of sequences better than 0.5: 364
Number of HSP's better than 0.5 without gapping: 331
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 115449
Number of HSP's gapped (non-prelim): 1008
length of query: 1122
length of database: 491,359,669
effective HSP length: 20
effective length of query: 1102
effective length of database: 474,703,049
effective search space: 523122759998
effective search space used: 523122759998
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)