BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198766.2.1
(1273 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AK072583.1| Oryza sativa (japonica cultivar-group) cDNA... 561 e-157
dbj|AP005708.1| Oryza sativa (japonica cultivar-group) chro... 363 2e-097
ref|NT_107232.1| Oryza sativa (japonica cultivar-group) 363 2e-097
gb|AACV01014423.1| Oryza sativa (japonica cultivar-group) c... 363 2e-097
dbj|AP003724.2| Oryza sativa (japonica cultivar-group) geno... 363 2e-097
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 363 2e-097
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 363 2e-097
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 363 2e-097
dbj|AK101009.1| Oryza sativa (japonica cultivar-group) cDNA... 238 6e-060
ref|XM_464629.1| Oryza sativa (japonica cultivar-group), mRNA 238 6e-060
gb|AACV01014424.1| Oryza sativa (japonica cultivar-group) c... 236 2e-059
dbj|AP004780.1| Oryza sativa (japonica cultivar-group) chro... 196 2e-047
dbj|AP004039.3| Oryza sativa (japonica cultivar-group) geno... 196 2e-047
gb|AACV01003607.1| Oryza sativa (japonica cultivar-group) c... 196 2e-047
ref|NT_107178.1| Oryza sativa (japonica cultivar-group) 196 2e-047
gb|CH401169.1| Oryza sativa (japonica cultivar-group) chrom... 196 2e-047
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 196 2e-047
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 196 2e-047
dbj|AK070509.1| Oryza sativa (japonica cultivar-group) cDNA... 137 2e-029
gb|AACV01013018.1| Oryza sativa (japonica cultivar-group) c... 137 2e-029
dbj|AP003487.2| Oryza sativa (japonica cultivar-group) geno... 137 2e-029
dbj|AP003767.3| Oryza sativa (japonica cultivar-group) geno... 137 2e-029
ref|NT_107230.2| Oryza sativa (japonica cultivar-group) 137 2e-029
gb|CH401209.1| Oryza sativa (japonica cultivar-group) chrom... 137 2e-029
gb|AQ862064.1|AQ862064 nbeb0018O13f CUGI Rice BAC Library (... 129 4e-027
gb|AQ865437.1|AQ865437 nbeb0025I06f CUGI Rice BAC Library (... 129 4e-027
gb|CZ444110.1|CZ444110 UCDRdSpm486_3.1 UCD RdSpm Rice Inser... 125 6e-026
gb|C73240.1|C73240 C73240 Rice panicle at flowering stage O... 111 9e-022
gb|CV733041.1|CV733041 FLO--07-M13.b1 Rice flower lambda ph... 111 9e-022
dbj|AK100191.1| Oryza sativa (japonica cultivar-group) cDNA... 111 9e-022
gb|AACV01013020.1| Oryza sativa (japonica cultivar-group) c... 111 9e-022
gb|AZ129643.1|AZ129643 OSJNBb0064C01r CUGI Rice BAC Library... 88 1e-014
gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A0... 76 5e-011
gb|AC025905.3| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|AACV01021719.1| Oryza sativa (japonica cultivar-group) c... 76 5e-011
ref|NM_196827.1| Oryza sativa (japonica cultivar-group) put... 76 5e-011
ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chr... 76 5e-011
gb|CH401254.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|CM000147.1| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
dbj|AP008216.1| Oryza sativa (japonica cultivar-group) geno... 76 5e-011
gb|AE016959.3| Oryza sativa (japonica cultivar-group) chrom... 76 5e-011
gb|AACV01028829.1| Oryza sativa (japonica cultivar-group) C... 56 5e-005
gb|AC136224.2| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
gb|AC136227.2| Oryza sativa (japonica cultivar-group) chrom... 56 5e-005
ref|NT_107206.1| Oryza sativa (japonica cultivar-group) 56 5e-005
gb|CH402036.1| Oryza sativa (japonica cultivar-group) scaff... 56 5e-005
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 56 5e-005
gb|AACV01010311.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
gb|AACV01010416.1| Oryza sativa (japonica cultivar-group) c... 52 8e-004
ref|NT_079865.2| Oryza sativa (japonica cultivar-group) 52 8e-004
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 52 8e-004
emb|AL662954.2|OSJN00155 Oryza sativa genomic DNA, chromoso... 52 8e-004
emb|AL731579.4|OSJN00225 Oryza sativa genomic DNA, chromoso... 52 8e-004
emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromoso... 52 8e-004
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 52 8e-004
gb|AZ135244.1|AZ135244 OSJNBb0115A18r CUGI Rice BAC Library... 48 0.012
emb|BX000499.1|CNS08CDP Oryza sativa chromosome 11, . BAC O... 48 0.012
ref|NT_107134.1| Oryza sativa (japonica cultivar-group) 48 0.012
gb|AACV01008547.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
gb|AACV01022341.1| Oryza sativa (japonica cultivar-group) c... 48 0.012
ref|XM_471234.1| Oryza sativa (japonica cultivar-group), p... 48 0.012
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 48 0.012
gb|CH401257.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.012
gb|CH401184.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.012
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.012
emb|AL731627.3|OSJN00272 Oryza sativa genomic DNA, chromoso... 48 0.012
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 48 0.012
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 48 0.012
gb|AU070353.1|AU070353 AU070353 Rice green shoot Oryza sati... 46 0.047
dbj|AP005541.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AACV01017899.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
ref|XM_481288.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.18
dbj|AP004696.3| Oryza sativa (japonica cultivar-group) geno... 44 0.18
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 44 0.18
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 44 0.18
>dbj|AK072583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023132G06, full
insert sequence
Length = 2078
Score = 561 bits (283), Expect = e-157
Identities = 564/655 (86%), Gaps = 2/655 (0%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |
Sbjct: 891 tccgcgactcgccggagcacttcggcttccgcacccagtccgacggcgacggcatcagca 950
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 951 tcttcggctccaccaacgtctggctcgaccacctctccctctccaactgccaggacggcc 1010
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcaccatctccaactgccacctcaccaacc 617
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 1011 tcatcgacgtcatcgccaagtccaccggagtcaccatctccaactgccacctcaccaacc 1070
Query: 618 acaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcatgcag 676
|||||||||||||||||||| ||||||||||| | || |||||||||||||||||||
Sbjct: 1071 acaacgacgtcatgctcttcggctccagcgac-tccttcagcgaggaccagatcatgcag 1129
Query: 677 atcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaaggtgccgc 736
||||||||||| ||||||||||||||| | |||||||| || || ||||| || |||||
Sbjct: 1130 atcaccgtcgctttcaaccacttcggccgcggcctcgtccaaagaatgcccagatgccga 1189
Query: 737 tggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggc 796
||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 1190 tggggatttttccacgtggtgaacaacgactacacgcactggctcatgtatgccatcgga 1249
Query: 797 ggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgcccaacctt 856
|| |||||| ||| || |||||||||||||| ||| | |||||||||||||| |||||
Sbjct: 1250 gggagcaagaacccgacgatcatcagccaggggaacaggtacatcgcgccgccaaaccta 1309
Query: 857 gccgcgaagcaggtcaccaagcagcatgacacgccggagtccgtgtggaagaactgggtg 916
|| ||||||| | |||| ||||||| | || ||||| | ||||||||||||||||
Sbjct: 1310 gcggcgaagcggatcacgaagcagctcggggcgacggaggaggagtggaagaactgggtg 1369
Query: 917 tggcactccgagaacgacctcttcatggagggcgcctacttcaccgtcaccggcggccag 976
|||||||| ||| | ||||| ||||||||||| |||||||||||| |||| |||| |
Sbjct: 1370 tggcactctgaggaggacctgttcatggagggggcctacttcaccacgtccggtggcccg 1429
Query: 977 atcaacagacagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcacc 1036
||| | | ||||||| ||| ||||| || |||||||||| | ||| |||||||||||
Sbjct: 1430 atccagaagcagttcagcaacaaggatctgatcaagcccaagcccggatcctacgtcacg 1489
Query: 1037 aggctcacgcgctacgccggctccctcgcctgcacgcccggcaagccctgctaga 1091
|||||||| |||| ||| |||||| || | ||| | |||||||||| |||||||
Sbjct: 1490 aggctcacccgcttcgctggctccatcccatgcgtggccggcaagccgtgctaga 1544
Score = 355 bits (179), Expect = 4e-095
Identities = 335/387 (86%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 482 tgcaaggcgacgaacccgatcgaccggtgctggaggtgccgcgccgactgggtgacggac 541
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||
Sbjct: 542 aggaagcggctggcgcggtgcgcgcaggggttcggccggaacaccaccggagggctggcc 601
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggc 202
|| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 602 gggaagttctacctggtgacggacggcaccgacgacgacgtggagaacccgcgcccgggg 661
Query: 203 acgctccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
|||||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||
Sbjct: 662 acgctccggtggggtgtcatccaggacgagccactgtggatcatcttcgccaaggacatg 721
Query: 263 atcatcacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggc 322
||||||| || ||||||||| | || ||| | |||||||||| || ||||| || ||
Sbjct: 722 atcatcaacctcaaggaggagatgatgatcaacagcgacaagacgatcgacgggcgggga 781
Query: 323 gtgcaggtgcgcatcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatc 382
| ||||||||| |||||||| ||||||||| | ||| ||||| | ||||||||| |||
Sbjct: 782 gcgcaggtgcggatcaccaatggcgcgcaggtgacggtgcagaactccaacaacgtgatc 841
Query: 383 atccacaacatccacatcaacgacatc 409
|||||||||||||||||| ||||||||
Sbjct: 842 atccacaacatccacatccacgacatc 868
>dbj|AP005708.1| Oryza sativa (japonica cultivar-group) chromosome 6 clone P0507H07, ***
SEQUENCING IN PROGRESS ***
Length = 101786
Score = 363 bits (183), Expect = 2e-097
Identities = 269/295 (91%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |
Sbjct: 35752 tccgcgactcgccggagcacttcggcttccgcacccagtccgacggcgacggcatcagca 35693
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 35692 tcttcggctccaccaacgtctggctcgaccacctctccctctccaactgccaggacggcc 35633
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcaccatctccaactgccacctcaccaacc 617
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 35632 tcatcgacgtcatcgccaagtccaccggagtcaccatctccaactgccacctcaccaacc 35573
Query: 618 acaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcatgcag 676
|||||||||||||||||||| ||||||||||| | || |||||||||||||||||||
Sbjct: 35572 acaacgacgtcatgctcttcggctccagcgac-tccttcagcgaggaccagatcatgcag 35514
Query: 677 atcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaaggt 731
||||||||||| ||||||||||||||| | |||||||| || || ||||| ||||
Sbjct: 35513 atcaccgtcgctttcaaccacttcggccgcggcctcgtccaaagaatgcccaggt 35459
Score = 355 bits (179), Expect = 4e-095
Identities = 335/387 (86%)
Strand = Plus / Minus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 36161 tgcaaggcgacgaacccgatcgaccggtgctggaggtgccgcgccgactgggtgacggac 36102
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||
Sbjct: 36101 aggaagcggctggcgcggtgcgcgcaggggttcggccggaacaccaccggagggctggcc 36042
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggc 202
|| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 36041 gggaagttctacctggtgacggacggcaccgacgacgacgtggagaacccgcgcccgggg 35982
Query: 203 acgctccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
|||||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||
Sbjct: 35981 acgctccggtggggtgtcatccaggacgagccactgtggatcatcttcgccaaggacatg 35922
Query: 263 atcatcacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggc 322
||||||| || ||||||||| | || ||| | |||||||||| || ||||| || ||
Sbjct: 35921 atcatcaacctcaaggaggagatgatgatcaacagcgacaagacgatcgacgggcgggga 35862
Query: 323 gtgcaggtgcgcatcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatc 382
| ||||||||| |||||||| ||||||||| | ||| ||||| | ||||||||| |||
Sbjct: 35861 gcgcaggtgcggatcaccaatggcgcgcaggtgacggtgcagaactccaacaacgtgatc 35802
Query: 383 atccacaacatccacatcaacgacatc 409
|||||||||||||||||| ||||||||
Sbjct: 35801 atccacaacatccacatccacgacatc 35775
Score = 236 bits (119), Expect = 2e-059
Identities = 230/264 (87%), Gaps = 6/264 (2%)
Strand = Plus / Minus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||| ||| || ||||||| |||||| |||||| |||| | ||||| |
Sbjct: 32329 tccgcgactcgctggagcagttcggcttccgcacccagtccgacagcgatgacatcaaca 32270
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||
Sbjct: 32269 tcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacggcc 32210
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcac----catctccaactgccacctcacc 613
||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 32209 tcatcgacgtcatcgccaagtccaccggagtcaccatgcatctccaactaccacctcacc 32150
Query: 614 aaccacaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcat 672
|||||||||||| ||| ||||||||||||||| ||| | || |||||||||||||||
Sbjct: 32149 aaccacaacgacatcaggctcttcagctccagtgac-tccttcagcgaggaccagatcat 32091
Query: 673 gcagatcaccgtcgccttcaacca 696
||||||||| ||||||||||||||
Sbjct: 32090 gcagatcactgtcgccttcaacca 32067
Score = 208 bits (105), Expect = 5e-051
Identities = 297/361 (82%)
Strand = Plus / Minus
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 35346 tgccgatggggatttttccacgtggtgaacaacgactacacgcactggctcatgtatgcc 35287
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||| || |||||| ||| || |||||||||||||| ||| | ||||||||||||||
Sbjct: 35286 atcggagggagcaagaacccgacgatcatcagccaggggaacaggtacatcgcgccgcca 35227
Query: 851 aaccttgccgcgaagcaggtcaccaagcagcatgacacgccggagtccgtgtggaagaac 910
||||| || ||||||| | |||| ||||||| | || ||||| | ||||||||||
Sbjct: 35226 aacctagcggcgaagcggatcacgaagcagctcggggcgacggaggaggagtggaagaac 35167
Query: 911 tgggtgtggcactccgagaacgacctcttcatggagggcgcctacttcaccgtcaccggc 970
|||||||||||||| ||| | ||||| ||||||||||| |||||||||||| ||||
Sbjct: 35166 tgggtgtggcactctgaggaggacctgttcatggagggggcctacttcaccacgtccggt 35107
Query: 971 ggccagatcaacagacagttcaacaagaaggacctcatcaagcccaggaacgggtcctac 1030
|||| |||| | | ||||||| ||| ||||| || |||||||||| | ||| ||||||
Sbjct: 35106 ggcccgatccagaagcagttcagcaacaaggatctgatcaagcccaagcccggatcctac 35047
Query: 1031 gtcaccaggctcacgcgctacgccggctccctcgcctgcacgcccggcaagccctgctag 1090
||||| |||||||| |||| ||| |||||| || | ||| | |||||||||| ||||||
Sbjct: 35046 gtcacgaggctcacccgcttcgctggctccatcccatgcgtggccggcaagccgtgctag 34987
Query: 1091 a 1091
|
Sbjct: 34986 a 34986
Score = 186 bits (94), Expect = 2e-044
Identities = 305/374 (81%), Gaps = 1/374 (0%)
Strand = Plus / Minus
Query: 38 ccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcgcctggcg 97
|||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 32722 ccgatcgaccggtgctagaggtgccgcaccgactgggcgacggacaggaagcggctggcg 32663
Query: 98 cggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagttctacgtg 157
| |||||| | |||||||| ||||||||||| ||| ||||||| ||||||||| |
Sbjct: 32662 ctgtgcgcacaagggttcggcttaaacaccaccggagggttggccgggaagttctaccta 32603
Query: 158 gtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtggggc 217
|||||||||||||||||||| |||| |||||| |||| ||| || |||||||| |||||
Sbjct: 32602 gtgacggacggcaccgacgatgacgcggtgaatccgc-cccggggacgctccgttggggt 32544
Query: 218 gtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcatcacgcttaag 277
|| |||||| |||||| |||||||||| ||| |||||| |||||||||| || |||
Sbjct: 32543 gtgatccaggacgagccactgtggatcatctttgccaaggagatgatcatcaacctcaag 32484
Query: 278 gaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatc 337
|||| | | || ||| |||||||||| || ||| | || || | ||| ||||| |||
Sbjct: 32483 gaggggatgatgatcaatagcgacaagacaatcgacaggcggggagcgcatgtgcggatc 32424
Query: 338 accaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccac 397
||||| |||| |||| | ||| ||||| | ||||||||| ||||||||||||||||||
Sbjct: 32423 accaatggcgtgcaggtgacggtgcagaactccaacaacgtgatcatccacaacatccac 32364
Query: 398 atcaacgacatcgt 411
||| ||||||||||
Sbjct: 32363 atccacgacatcgt 32350
Score = 91.7 bits (46), Expect = 9e-016
Identities = 82/94 (87%)
Strand = Plus / Minus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 31916 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 31857
Query: 806 gcccccaccatcatcagccagggcaaccgctaca 839
||| || ||||| |||||||| ||||| ||||
Sbjct: 31856 aacccgacgatcattagccaggggaaccggtaca 31823
Score = 63.9 bits (32), Expect = 2e-007
Identities = 80/96 (83%)
Strand = Plus / Minus
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| |||||||| |||||||||| | || ||||||||| | |||||||||
Sbjct: 31672 cagttcagcaacaaggacctgatcaagcccaagcctggatcctacgtcgcgaggctcacg 31613
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaag 1081
|||| |||||||| | || | ||||| |||||||||
Sbjct: 31612 cgcttcgccggcttcatcccgtgcactcccggcaag 31577
>ref|NT_107232.1| Oryza sativa (japonica cultivar-group)
Length = 367211
Score = 363 bits (183), Expect = 2e-097
Identities = 269/295 (91%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |
Sbjct: 332218 tccgcgactcgccggagcacttcggcttccgcacccagtccgacggcgacggcatcagca 332277
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 332278 tcttcggctccaccaacgtctggctcgaccacctctccctctccaactgccaggacggcc 332337
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcaccatctccaactgccacctcaccaacc 617
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 332338 tcatcgacgtcatcgccaagtccaccggagtcaccatctccaactgccacctcaccaacc 332397
Query: 618 acaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcatgcag 676
|||||||||||||||||||| ||||||||||| | || |||||||||||||||||||
Sbjct: 332398 acaacgacgtcatgctcttcggctccagcgac-tccttcagcgaggaccagatcatgcag 332456
Query: 677 atcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaaggt 731
||||||||||| ||||||||||||||| | |||||||| || || ||||| ||||
Sbjct: 332457 atcaccgtcgctttcaaccacttcggccgcggcctcgtccaaagaatgcccaggt 332511
Score = 355 bits (179), Expect = 4e-095
Identities = 335/387 (86%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 331809 tgcaaggcgacgaacccgatcgaccggtgctggaggtgccgcgccgactgggtgacggac 331868
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||
Sbjct: 331869 aggaagcggctggcgcggtgcgcgcaggggttcggccggaacaccaccggagggctggcc 331928
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggc 202
|| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 331929 gggaagttctacctggtgacggacggcaccgacgacgacgtggagaacccgcgcccgggg 331988
Query: 203 acgctccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
|||||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||
Sbjct: 331989 acgctccggtggggtgtcatccaggacgagccactgtggatcatcttcgccaaggacatg 332048
Query: 263 atcatcacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggc 322
||||||| || ||||||||| | || ||| | |||||||||| || ||||| || ||
Sbjct: 332049 atcatcaacctcaaggaggagatgatgatcaacagcgacaagacgatcgacgggcgggga 332108
Query: 323 gtgcaggtgcgcatcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatc 382
| ||||||||| |||||||| ||||||||| | ||| ||||| | ||||||||| |||
Sbjct: 332109 gcgcaggtgcggatcaccaatggcgcgcaggtgacggtgcagaactccaacaacgtgatc 332168
Query: 383 atccacaacatccacatcaacgacatc 409
|||||||||||||||||| ||||||||
Sbjct: 332169 atccacaacatccacatccacgacatc 332195
Score = 236 bits (119), Expect = 2e-059
Identities = 230/264 (87%), Gaps = 6/264 (2%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||| ||| || ||||||| |||||| |||||| |||| | ||||| |
Sbjct: 335641 tccgcgactcgctggagcagttcggcttccgcacccagtccgacagcgatgacatcaaca 335700
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||
Sbjct: 335701 tcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacggcc 335760
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcac----catctccaactgccacctcacc 613
||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 335761 tcatcgacgtcatcgccaagtccaccggagtcaccatgcatctccaactaccacctcacc 335820
Query: 614 aaccacaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcat 672
|||||||||||| ||| ||||||||||||||| ||| | || |||||||||||||||
Sbjct: 335821 aaccacaacgacatcaggctcttcagctccagtgac-tccttcagcgaggaccagatcat 335879
Query: 673 gcagatcaccgtcgccttcaacca 696
||||||||| ||||||||||||||
Sbjct: 335880 gcagatcactgtcgccttcaacca 335903
Score = 208 bits (105), Expect = 5e-051
Identities = 297/361 (82%)
Strand = Plus / Plus
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 332624 tgccgatggggatttttccacgtggtgaacaacgactacacgcactggctcatgtatgcc 332683
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||| || |||||| ||| || |||||||||||||| ||| | ||||||||||||||
Sbjct: 332684 atcggagggagcaagaacccgacgatcatcagccaggggaacaggtacatcgcgccgcca 332743
Query: 851 aaccttgccgcgaagcaggtcaccaagcagcatgacacgccggagtccgtgtggaagaac 910
||||| || ||||||| | |||| ||||||| | || ||||| | ||||||||||
Sbjct: 332744 aacctagcggcgaagcggatcacgaagcagctcggggcgacggaggaggagtggaagaac 332803
Query: 911 tgggtgtggcactccgagaacgacctcttcatggagggcgcctacttcaccgtcaccggc 970
|||||||||||||| ||| | ||||| ||||||||||| |||||||||||| ||||
Sbjct: 332804 tgggtgtggcactctgaggaggacctgttcatggagggggcctacttcaccacgtccggt 332863
Query: 971 ggccagatcaacagacagttcaacaagaaggacctcatcaagcccaggaacgggtcctac 1030
|||| |||| | | ||||||| ||| ||||| || |||||||||| | ||| ||||||
Sbjct: 332864 ggcccgatccagaagcagttcagcaacaaggatctgatcaagcccaagcccggatcctac 332923
Query: 1031 gtcaccaggctcacgcgctacgccggctccctcgcctgcacgcccggcaagccctgctag 1090
||||| |||||||| |||| ||| |||||| || | ||| | |||||||||| ||||||
Sbjct: 332924 gtcacgaggctcacccgcttcgctggctccatcccatgcgtggccggcaagccgtgctag 332983
Query: 1091 a 1091
|
Sbjct: 332984 a 332984
Score = 186 bits (94), Expect = 2e-044
Identities = 305/374 (81%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 38 ccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcgcctggcg 97
|||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 335248 ccgatcgaccggtgctagaggtgccgcaccgactgggcgacggacaggaagcggctggcg 335307
Query: 98 cggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagttctacgtg 157
| |||||| | |||||||| ||||||||||| ||| ||||||| ||||||||| |
Sbjct: 335308 ctgtgcgcacaagggttcggcttaaacaccaccggagggttggccgggaagttctaccta 335367
Query: 158 gtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtggggc 217
|||||||||||||||||||| |||| |||||| |||| ||| || |||||||| |||||
Sbjct: 335368 gtgacggacggcaccgacgatgacgcggtgaatccgc-cccggggacgctccgttggggt 335426
Query: 218 gtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcatcacgcttaag 277
|| |||||| |||||| |||||||||| ||| |||||| |||||||||| || |||
Sbjct: 335427 gtgatccaggacgagccactgtggatcatctttgccaaggagatgatcatcaacctcaag 335486
Query: 278 gaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatc 337
|||| | | || ||| |||||||||| || ||| | || || | ||| ||||| |||
Sbjct: 335487 gaggggatgatgatcaatagcgacaagacaatcgacaggcggggagcgcatgtgcggatc 335546
Query: 338 accaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccac 397
||||| |||| |||| | ||| ||||| | ||||||||| ||||||||||||||||||
Sbjct: 335547 accaatggcgtgcaggtgacggtgcagaactccaacaacgtgatcatccacaacatccac 335606
Query: 398 atcaacgacatcgt 411
||| ||||||||||
Sbjct: 335607 atccacgacatcgt 335620
Score = 91.7 bits (46), Expect = 9e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 336054 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 336113
Query: 806 gcccccaccatcatcagccagggcaaccgctaca 839
||| || ||||| |||||||| ||||| ||||
Sbjct: 336114 aacccgacgatcattagccaggggaaccggtaca 336147
Score = 63.9 bits (32), Expect = 2e-007
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| |||||||| |||||||||| | || ||||||||| | |||||||||
Sbjct: 336298 cagttcagcaacaaggacctgatcaagcccaagcctggatcctacgtcgcgaggctcacg 336357
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaag 1081
|||| |||||||| | || | ||||| |||||||||
Sbjct: 336358 cgcttcgccggcttcatcccgtgcactcccggcaag 336393
>gb|AACV01014423.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014423,
whole genome shotgun sequence
Length = 8187
Score = 363 bits (183), Expect = 2e-097
Identities = 269/295 (91%), Gaps = 2/295 (0%)
Strand = Plus / Minus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |
Sbjct: 311 tccgcgactcgccggagcacttcggcttccgcacccagtccgacggcgacggcatcagca 252
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 251 tcttcggctccaccaacgtctggctcgaccacctctccctctccaactgccaggacggcc 192
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcaccatctccaactgccacctcaccaacc 617
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 191 tcatcgacgtcatcgccaagtccaccggagtcaccatctccaactgccacctcaccaacc 132
Query: 618 acaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcatgcag 676
|||||||||||||||||||| ||||||||||| | || |||||||||||||||||||
Sbjct: 131 acaacgacgtcatgctcttcggctccagcgac-tccttcagcgaggaccagatcatgcag 73
Query: 677 atcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaaggt 731
||||||||||| ||||||||||||||| | |||||||| || || ||||| ||||
Sbjct: 72 atcaccgtcgctttcaaccacttcggccgcggcctcgtccaaagaatgcccaggt 18
Score = 355 bits (179), Expect = 4e-095
Identities = 335/387 (86%)
Strand = Plus / Minus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 720 tgcaaggcgacgaacccgatcgaccggtgctggaggtgccgcgccgactgggtgacggac 661
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||
Sbjct: 660 aggaagcggctggcgcggtgcgcgcaggggttcggccggaacaccaccggagggctggcc 601
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggc 202
|| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 600 gggaagttctacctggtgacggacggcaccgacgacgacgtggagaacccgcgcccgggg 541
Query: 203 acgctccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
|||||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||
Sbjct: 540 acgctccggtggggtgtcatccaggacgagccactgtggatcatcttcgccaaggacatg 481
Query: 263 atcatcacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggc 322
||||||| || ||||||||| | || ||| | |||||||||| || ||||| || ||
Sbjct: 480 atcatcaacctcaaggaggagatgatgatcaacagcgacaagacgatcgacgggcgggga 421
Query: 323 gtgcaggtgcgcatcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatc 382
| ||||||||| |||||||| ||||||||| | ||| ||||| | ||||||||| |||
Sbjct: 420 gcgcaggtgcggatcaccaatggcgcgcaggtgacggtgcagaactccaacaacgtgatc 361
Query: 383 atccacaacatccacatcaacgacatc 409
|||||||||||||||||| ||||||||
Sbjct: 360 atccacaacatccacatccacgacatc 334
>dbj|AP003724.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0498C03
Length = 146394
Score = 363 bits (183), Expect = 2e-097
Identities = 269/295 (91%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |
Sbjct: 111401 tccgcgactcgccggagcacttcggcttccgcacccagtccgacggcgacggcatcagca 111460
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 111461 tcttcggctccaccaacgtctggctcgaccacctctccctctccaactgccaggacggcc 111520
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcaccatctccaactgccacctcaccaacc 617
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 111521 tcatcgacgtcatcgccaagtccaccggagtcaccatctccaactgccacctcaccaacc 111580
Query: 618 acaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcatgcag 676
|||||||||||||||||||| ||||||||||| | || |||||||||||||||||||
Sbjct: 111581 acaacgacgtcatgctcttcggctccagcgac-tccttcagcgaggaccagatcatgcag 111639
Query: 677 atcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaaggt 731
||||||||||| ||||||||||||||| | |||||||| || || ||||| ||||
Sbjct: 111640 atcaccgtcgctttcaaccacttcggccgcggcctcgtccaaagaatgcccaggt 111694
Score = 355 bits (179), Expect = 4e-095
Identities = 335/387 (86%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 110992 tgcaaggcgacgaacccgatcgaccggtgctggaggtgccgcgccgactgggtgacggac 111051
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||
Sbjct: 111052 aggaagcggctggcgcggtgcgcgcaggggttcggccggaacaccaccggagggctggcc 111111
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggc 202
|| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 111112 gggaagttctacctggtgacggacggcaccgacgacgacgtggagaacccgcgcccgggg 111171
Query: 203 acgctccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
|||||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||
Sbjct: 111172 acgctccggtggggtgtcatccaggacgagccactgtggatcatcttcgccaaggacatg 111231
Query: 263 atcatcacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggc 322
||||||| || ||||||||| | || ||| | |||||||||| || ||||| || ||
Sbjct: 111232 atcatcaacctcaaggaggagatgatgatcaacagcgacaagacgatcgacgggcgggga 111291
Query: 323 gtgcaggtgcgcatcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatc 382
| ||||||||| |||||||| ||||||||| | ||| ||||| | ||||||||| |||
Sbjct: 111292 gcgcaggtgcggatcaccaatggcgcgcaggtgacggtgcagaactccaacaacgtgatc 111351
Query: 383 atccacaacatccacatcaacgacatc 409
|||||||||||||||||| ||||||||
Sbjct: 111352 atccacaacatccacatccacgacatc 111378
Score = 236 bits (119), Expect = 2e-059
Identities = 230/264 (87%), Gaps = 6/264 (2%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||| ||| || ||||||| |||||| |||||| |||| | ||||| |
Sbjct: 114824 tccgcgactcgctggagcagttcggcttccgcacccagtccgacagcgatgacatcaaca 114883
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||
Sbjct: 114884 tcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacggcc 114943
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcac----catctccaactgccacctcacc 613
||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 114944 tcatcgacgtcatcgccaagtccaccggagtcaccatgcatctccaactaccacctcacc 115003
Query: 614 aaccacaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcat 672
|||||||||||| ||| ||||||||||||||| ||| | || |||||||||||||||
Sbjct: 115004 aaccacaacgacatcaggctcttcagctccagtgac-tccttcagcgaggaccagatcat 115062
Query: 673 gcagatcaccgtcgccttcaacca 696
||||||||| ||||||||||||||
Sbjct: 115063 gcagatcactgtcgccttcaacca 115086
Score = 208 bits (105), Expect = 5e-051
Identities = 297/361 (82%)
Strand = Plus / Plus
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 111807 tgccgatggggatttttccacgtggtgaacaacgactacacgcactggctcatgtatgcc 111866
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||| || |||||| ||| || |||||||||||||| ||| | ||||||||||||||
Sbjct: 111867 atcggagggagcaagaacccgacgatcatcagccaggggaacaggtacatcgcgccgcca 111926
Query: 851 aaccttgccgcgaagcaggtcaccaagcagcatgacacgccggagtccgtgtggaagaac 910
||||| || ||||||| | |||| ||||||| | || ||||| | ||||||||||
Sbjct: 111927 aacctagcggcgaagcggatcacgaagcagctcggggcgacggaggaggagtggaagaac 111986
Query: 911 tgggtgtggcactccgagaacgacctcttcatggagggcgcctacttcaccgtcaccggc 970
|||||||||||||| ||| | ||||| ||||||||||| |||||||||||| ||||
Sbjct: 111987 tgggtgtggcactctgaggaggacctgttcatggagggggcctacttcaccacgtccggt 112046
Query: 971 ggccagatcaacagacagttcaacaagaaggacctcatcaagcccaggaacgggtcctac 1030
|||| |||| | | ||||||| ||| ||||| || |||||||||| | ||| ||||||
Sbjct: 112047 ggcccgatccagaagcagttcagcaacaaggatctgatcaagcccaagcccggatcctac 112106
Query: 1031 gtcaccaggctcacgcgctacgccggctccctcgcctgcacgcccggcaagccctgctag 1090
||||| |||||||| |||| ||| |||||| || | ||| | |||||||||| ||||||
Sbjct: 112107 gtcacgaggctcacccgcttcgctggctccatcccatgcgtggccggcaagccgtgctag 112166
Query: 1091 a 1091
|
Sbjct: 112167 a 112167
Score = 186 bits (94), Expect = 2e-044
Identities = 305/374 (81%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 38 ccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcgcctggcg 97
|||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 114431 ccgatcgaccggtgctagaggtgccgcaccgactgggcgacggacaggaagcggctggcg 114490
Query: 98 cggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagttctacgtg 157
| |||||| | |||||||| ||||||||||| ||| ||||||| ||||||||| |
Sbjct: 114491 ctgtgcgcacaagggttcggcttaaacaccaccggagggttggccgggaagttctaccta 114550
Query: 158 gtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtggggc 217
|||||||||||||||||||| |||| |||||| |||| ||| || |||||||| |||||
Sbjct: 114551 gtgacggacggcaccgacgatgacgcggtgaatccgc-cccggggacgctccgttggggt 114609
Query: 218 gtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcatcacgcttaag 277
|| |||||| |||||| |||||||||| ||| |||||| |||||||||| || |||
Sbjct: 114610 gtgatccaggacgagccactgtggatcatctttgccaaggagatgatcatcaacctcaag 114669
Query: 278 gaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatc 337
|||| | | || ||| |||||||||| || ||| | || || | ||| ||||| |||
Sbjct: 114670 gaggggatgatgatcaatagcgacaagacaatcgacaggcggggagcgcatgtgcggatc 114729
Query: 338 accaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccac 397
||||| |||| |||| | ||| ||||| | ||||||||| ||||||||||||||||||
Sbjct: 114730 accaatggcgtgcaggtgacggtgcagaactccaacaacgtgatcatccacaacatccac 114789
Query: 398 atcaacgacatcgt 411
||| ||||||||||
Sbjct: 114790 atccacgacatcgt 114803
Score = 91.7 bits (46), Expect = 9e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 115237 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 115296
Query: 806 gcccccaccatcatcagccagggcaaccgctaca 839
||| || ||||| |||||||| ||||| ||||
Sbjct: 115297 aacccgacgatcattagccaggggaaccggtaca 115330
Score = 63.9 bits (32), Expect = 2e-007
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| |||||||| |||||||||| | || ||||||||| | |||||||||
Sbjct: 115481 cagttcagcaacaaggacctgatcaagcccaagcctggatcctacgtcgcgaggctcacg 115540
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaag 1081
|||| |||||||| | || | ||||| |||||||||
Sbjct: 115541 cgcttcgccggcttcatcccgtgcactcccggcaag 115576
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 363 bits (183), Expect = 2e-097
Identities = 269/295 (91%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |
Sbjct: 3822231 tccgcgactcgccggagcacttcggcttccgcacccagtccgacggcgacggcatcagca 3822290
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3822291 tcttcggctccaccaacgtctggctcgaccacctctccctctccaactgccaggacggcc 3822350
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcaccatctccaactgccacctcaccaacc 617
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 3822351 tcatcgacgtcatcgccaagtccaccggagtcaccatctccaactgccacctcaccaacc 3822410
Query: 618 acaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcatgcag 676
|||||||||||||||||||| ||||||||||| | || |||||||||||||||||||
Sbjct: 3822411 acaacgacgtcatgctcttcggctccagcgac-tccttcagcgaggaccagatcatgcag 3822469
Query: 677 atcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaaggt 731
||||||||||| ||||||||||||||| | |||||||| || || ||||| ||||
Sbjct: 3822470 atcaccgtcgctttcaaccacttcggccgcggcctcgtccaaagaatgcccaggt 3822524
Score = 355 bits (179), Expect = 4e-095
Identities = 335/387 (86%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 3821822 tgcaaggcgacgaacccgatcgaccggtgctggaggtgccgcgccgactgggtgacggac 3821881
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||
Sbjct: 3821882 aggaagcggctggcgcggtgcgcgcaggggttcggccggaacaccaccggagggctggcc 3821941
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggc 202
|| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 3821942 gggaagttctacctggtgacggacggcaccgacgacgacgtggagaacccgcgcccgggg 3822001
Query: 203 acgctccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
|||||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||
Sbjct: 3822002 acgctccggtggggtgtcatccaggacgagccactgtggatcatcttcgccaaggacatg 3822061
Query: 263 atcatcacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggc 322
||||||| || ||||||||| | || ||| | |||||||||| || ||||| || ||
Sbjct: 3822062 atcatcaacctcaaggaggagatgatgatcaacagcgacaagacgatcgacgggcgggga 3822121
Query: 323 gtgcaggtgcgcatcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatc 382
| ||||||||| |||||||| ||||||||| | ||| ||||| | ||||||||| |||
Sbjct: 3822122 gcgcaggtgcggatcaccaatggcgcgcaggtgacggtgcagaactccaacaacgtgatc 3822181
Query: 383 atccacaacatccacatcaacgacatc 409
|||||||||||||||||| ||||||||
Sbjct: 3822182 atccacaacatccacatccacgacatc 3822208
Score = 236 bits (119), Expect = 2e-059
Identities = 230/264 (87%), Gaps = 6/264 (2%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||| ||| || ||||||| |||||| |||||| |||| | ||||| |
Sbjct: 3826588 tccgcgactcgctggagcagttcggcttccgcacccagtccgacagcgatgacatcaaca 3826647
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||
Sbjct: 3826648 tcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacggcc 3826707
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcac----catctccaactgccacctcacc 613
||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 3826708 tcatcgacgtcatcgccaagtccaccggagtcaccatgcatctccaactaccacctcacc 3826767
Query: 614 aaccacaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcat 672
|||||||||||| ||| ||||||||||||||| ||| | || |||||||||||||||
Sbjct: 3826768 aaccacaacgacatcaggctcttcagctccagtgac-tccttcagcgaggaccagatcat 3826826
Query: 673 gcagatcaccgtcgccttcaacca 696
||||||||| ||||||||||||||
Sbjct: 3826827 gcagatcactgtcgccttcaacca 3826850
Score = 194 bits (98), Expect = 8e-047
Identities = 284/346 (82%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 3823586 ttccacgtggtgaacaacgactacacgcactggctcatgtatgccatcggagggagcaag 3823645
Query: 806 gcccccaccatcatcagccagggcaaccgctacatcgcgccgcccaaccttgccgcgaag 865
|| || |||||||||||||| ||| | |||||||||||||| ||||| || ||||||
Sbjct: 3823646 aaaccgacgatcatcagccaggggaacaggtacatcgcgccgccaaacctagcggcgaag 3823705
Query: 866 caggtcaccaagcagcatgacacgccggagtccgtgtggaagaactgggtgtggcactcc 925
| | |||| ||||||| | || ||||| | ||||||||||||||||||||||||
Sbjct: 3823706 cggatcacgaagcagctcggggcgacggaggaggagtggaagaactgggtgtggcactct 3823765
Query: 926 gagaacgacctcttcatggagggcgcctacttcaccgtcaccggcggccagatcaacaga 985
||| | ||||| ||||||||||| |||||||||||| |||| |||| |||| | |
Sbjct: 3823766 gaggaggacctgttcatggagggggcctacttcaccacgtccggtggcccgatccagaag 3823825
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| ||||| || |||||||||| | ||| ||||||||||| ||||||||
Sbjct: 3823826 cagttcagcaacaaggatctgatcaagcccaagcccggatcctacgtcacgaggctcacc 3823885
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaagccctgctaga 1091
|||| ||| |||||| || | ||| | |||||||||| |||||||
Sbjct: 3823886 cgcttcgctggctccatcccatgcgtggccggcaagccgtgctaga 3823931
Score = 186 bits (94), Expect = 2e-044
Identities = 305/374 (81%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 38 ccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcgcctggcg 97
|||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 3826195 ccgatcgaccggtgctagaggtgccgcaccgactgggcgacggacaggaagcggctggcg 3826254
Query: 98 cggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagttctacgtg 157
| |||||| | |||||||| ||||||||||| ||| ||||||| ||||||||| |
Sbjct: 3826255 ctgtgcgcacaagggttcggcttaaacaccaccggagggttggccgggaagttctaccta 3826314
Query: 158 gtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtggggc 217
|||||||||||||||||||| |||| |||||| |||| ||| || |||||||| |||||
Sbjct: 3826315 gtgacggacggcaccgacgatgacgcggtgaatccgc-cccggggacgctccgttggggt 3826373
Query: 218 gtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcatcacgcttaag 277
|| |||||| |||||| |||||||||| ||| |||||| |||||||||| || |||
Sbjct: 3826374 gtgatccaggacgagccactgtggatcatctttgccaaggagatgatcatcaacctcaag 3826433
Query: 278 gaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatc 337
|||| | | || ||| |||||||||| || ||| | || || | ||| ||||| |||
Sbjct: 3826434 gaggggatgatgatcaatagcgacaagacaatcgacaggcggggagcgcatgtgcggatc 3826493
Query: 338 accaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccac 397
||||| |||| |||| | ||| ||||| | ||||||||| ||||||||||||||||||
Sbjct: 3826494 accaatggcgtgcaggtgacggtgcagaactccaacaacgtgatcatccacaacatccac 3826553
Query: 398 atcaacgacatcgt 411
||| ||||||||||
Sbjct: 3826554 atccacgacatcgt 3826567
Score = 91.7 bits (46), Expect = 9e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 3827001 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 3827060
Query: 806 gcccccaccatcatcagccagggcaaccgctaca 839
||| || ||||| |||||||| ||||| ||||
Sbjct: 3827061 aacccgacgatcattagccaggggaaccggtaca 3827094
Score = 63.9 bits (32), Expect = 2e-007
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| |||||||| |||||||||| | || ||||||||| | |||||||||
Sbjct: 3827245 cagttcagcaacaaggacctgatcaagcccaagcctggatcctacgtcgcgaggctcacg 3827304
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaag 1081
|||| |||||||| | || | ||||| |||||||||
Sbjct: 3827305 cgcttcgccggcttcatcccgtgcactcccggcaag 3827340
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 363 bits (183), Expect = 2e-097
Identities = 269/295 (91%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |
Sbjct: 21520968 tccgcgactcgccggagcacttcggcttccgcacccagtccgacggcgacggcatcagca 21521027
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 21521028 tcttcggctccaccaacgtctggctcgaccacctctccctctccaactgccaggacggcc 21521087
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcaccatctccaactgccacctcaccaacc 617
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 21521088 tcatcgacgtcatcgccaagtccaccggagtcaccatctccaactgccacctcaccaacc 21521147
Query: 618 acaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcatgcag 676
|||||||||||||||||||| ||||||||||| | || |||||||||||||||||||
Sbjct: 21521148 acaacgacgtcatgctcttcggctccagcgac-tccttcagcgaggaccagatcatgcag 21521206
Query: 677 atcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaaggt 731
||||||||||| ||||||||||||||| | |||||||| || || ||||| ||||
Sbjct: 21521207 atcaccgtcgctttcaaccacttcggccgcggcctcgtccaaagaatgcccaggt 21521261
Score = 355 bits (179), Expect = 4e-095
Identities = 335/387 (86%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 21520559 tgcaaggcgacgaacccgatcgaccggtgctggaggtgccgcgccgactgggtgacggac 21520618
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||
Sbjct: 21520619 aggaagcggctggcgcggtgcgcgcaggggttcggccggaacaccaccggagggctggcc 21520678
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggc 202
|| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 21520679 gggaagttctacctggtgacggacggcaccgacgacgacgtggagaacccgcgcccgggg 21520738
Query: 203 acgctccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
|||||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||
Sbjct: 21520739 acgctccggtggggtgtcatccaggacgagccactgtggatcatcttcgccaaggacatg 21520798
Query: 263 atcatcacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggc 322
||||||| || ||||||||| | || ||| | |||||||||| || ||||| || ||
Sbjct: 21520799 atcatcaacctcaaggaggagatgatgatcaacagcgacaagacgatcgacgggcgggga 21520858
Query: 323 gtgcaggtgcgcatcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatc 382
| ||||||||| |||||||| ||||||||| | ||| ||||| | ||||||||| |||
Sbjct: 21520859 gcgcaggtgcggatcaccaatggcgcgcaggtgacggtgcagaactccaacaacgtgatc 21520918
Query: 383 atccacaacatccacatcaacgacatc 409
|||||||||||||||||| ||||||||
Sbjct: 21520919 atccacaacatccacatccacgacatc 21520945
Score = 236 bits (119), Expect = 2e-059
Identities = 230/264 (87%), Gaps = 6/264 (2%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||| ||| || ||||||| |||||| |||||| |||| | ||||| |
Sbjct: 21525325 tccgcgactcgctggagcagttcggcttccgcacccagtccgacagcgatgacatcaaca 21525384
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||
Sbjct: 21525385 tcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacggcc 21525444
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcac----catctccaactgccacctcacc 613
||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 21525445 tcatcgacgtcatcgccaagtccaccggagtcaccatgcatctccaactaccacctcacc 21525504
Query: 614 aaccacaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcat 672
|||||||||||| ||| ||||||||||||||| ||| | || |||||||||||||||
Sbjct: 21525505 aaccacaacgacatcaggctcttcagctccagtgac-tccttcagcgaggaccagatcat 21525563
Query: 673 gcagatcaccgtcgccttcaacca 696
||||||||| ||||||||||||||
Sbjct: 21525564 gcagatcactgtcgccttcaacca 21525587
Score = 194 bits (98), Expect = 8e-047
Identities = 284/346 (82%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 21522323 ttccacgtggtgaacaacgactacacgcactggctcatgtatgccatcggagggagcaag 21522382
Query: 806 gcccccaccatcatcagccagggcaaccgctacatcgcgccgcccaaccttgccgcgaag 865
|| || |||||||||||||| ||| | |||||||||||||| ||||| || ||||||
Sbjct: 21522383 aaaccgacgatcatcagccaggggaacaggtacatcgcgccgccaaacctagcggcgaag 21522442
Query: 866 caggtcaccaagcagcatgacacgccggagtccgtgtggaagaactgggtgtggcactcc 925
| | |||| ||||||| | || ||||| | ||||||||||||||||||||||||
Sbjct: 21522443 cggatcacgaagcagctcggggcgacggaggaggagtggaagaactgggtgtggcactct 21522502
Query: 926 gagaacgacctcttcatggagggcgcctacttcaccgtcaccggcggccagatcaacaga 985
||| | ||||| ||||||||||| |||||||||||| |||| |||| |||| | |
Sbjct: 21522503 gaggaggacctgttcatggagggggcctacttcaccacgtccggtggcccgatccagaag 21522562
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| ||||| || |||||||||| | ||| ||||||||||| ||||||||
Sbjct: 21522563 cagttcagcaacaaggatctgatcaagcccaagcccggatcctacgtcacgaggctcacc 21522622
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaagccctgctaga 1091
|||| ||| |||||| || | ||| | |||||||||| |||||||
Sbjct: 21522623 cgcttcgctggctccatcccatgcgtggccggcaagccgtgctaga 21522668
Score = 186 bits (94), Expect = 2e-044
Identities = 305/374 (81%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 38 ccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcgcctggcg 97
|||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 21524932 ccgatcgaccggtgctagaggtgccgcaccgactgggcgacggacaggaagcggctggcg 21524991
Query: 98 cggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagttctacgtg 157
| |||||| | |||||||| ||||||||||| ||| ||||||| ||||||||| |
Sbjct: 21524992 ctgtgcgcacaagggttcggcttaaacaccaccggagggttggccgggaagttctaccta 21525051
Query: 158 gtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtggggc 217
|||||||||||||||||||| |||| |||||| |||| ||| || |||||||| |||||
Sbjct: 21525052 gtgacggacggcaccgacgatgacgcggtgaatccgc-cccggggacgctccgttggggt 21525110
Query: 218 gtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcatcacgcttaag 277
|| |||||| |||||| |||||||||| ||| |||||| |||||||||| || |||
Sbjct: 21525111 gtgatccaggacgagccactgtggatcatctttgccaaggagatgatcatcaacctcaag 21525170
Query: 278 gaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatc 337
|||| | | || ||| |||||||||| || ||| | || || | ||| ||||| |||
Sbjct: 21525171 gaggggatgatgatcaatagcgacaagacaatcgacaggcggggagcgcatgtgcggatc 21525230
Query: 338 accaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccac 397
||||| |||| |||| | ||| ||||| | ||||||||| ||||||||||||||||||
Sbjct: 21525231 accaatggcgtgcaggtgacggtgcagaactccaacaacgtgatcatccacaacatccac 21525290
Query: 398 atcaacgacatcgt 411
||| ||||||||||
Sbjct: 21525291 atccacgacatcgt 21525304
Score = 137 bits (69), Expect = 2e-029
Identities = 144/169 (85%)
Strand = Plus / Minus
Query: 660 aggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcaga 719
||||| ||||||||||| | || | || ||||||||||| |||| || ||||||||||
Sbjct: 2290530 aggacaagatcatgcaggtaacgctggcattcaaccactttggcaaggggctcgtgcaga 2290471
Query: 720 ggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactacacgcactggc 779
||||||| |||||| | | || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 2290470 ggatgccgaggtgcaggtttggattcttccacatggtgaacaacgactacacgcactggc 2290411
Query: 780 tcatgtacgccatcggcggcagcaaggcccccaccatcatcagccaggg 828
||||||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 2290410 tcatgtacgccatcggcggcaacatgaacccgacgatcatcagccaggg 2290362
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 2324147 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 2324206
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 2324207 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 2324250
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Minus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 2285792 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 2285733
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 2285732 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 2285689
Score = 91.7 bits (46), Expect = 9e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 21525738 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 21525797
Query: 806 gcccccaccatcatcagccagggcaaccgctaca 839
||| || ||||| |||||||| ||||| ||||
Sbjct: 21525798 aacccgacgatcattagccaggggaaccggtaca 21525831
Score = 87.7 bits (44), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Minus
Query: 279 aggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatca 338
||||||||||| || | ||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 2290990 aggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcacgtca 2290931
Query: 339 ccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccaca 398
| |||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||
Sbjct: 2290930 c---cggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccaca 2290874
Query: 399 tc 400
||
Sbjct: 2290873 tc 2290872
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Minus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 2286146 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 2286087
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 2286086 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 2286027
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 2286026 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 2285967
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 2285966 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 2285920
Score = 81.8 bits (41), Expect = 8e-013
Identities = 113/137 (82%)
Strand = Plus / Minus
Query: 31 gacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcg 90
||||||||||||||||| ||||||||| ||||| || ||||||||| || |||||
Sbjct: 2291238 gacgaacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcg 2291179
Query: 91 cctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagtt 150
||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||||| |
Sbjct: 2291178 gctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagat 2291119
Query: 151 ctacgtggtgacggacg 167
|||| | ||||||||||
Sbjct: 2291118 ctacatcgtgacggacg 2291102
Score = 75.8 bits (38), Expect = 5e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| ||||| | ||||||| |||| | ||| | |||||| ||||| |
Sbjct: 2290800 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 2290741
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| ||||||||||||||| ||| || | ||||| | | ||||||||||
Sbjct: 2290740 gtccaactgctccgacggcctcatcgacatcaccgacggctccaccgccatcaccatctc 2290681
Query: 598 caactgccacctcaccaa 615
||||| |||| |||||||
Sbjct: 2290680 caactcccacttcaccaa 2290663
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 2286592 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 2286533
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 2286532 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 2286473
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 2286472 ggcaagatctacgtggtgaccgacgccagcgacgacga 2286435
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 588 tcaccatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcg 647
||||||||||||| ||||| ||||||| ||| || |||||||||||||| || |||||
Sbjct: 2323903 tcaccatctccaaaggccacttcaccaagcacgaccacgtcatgctcttcggcgccagca 2323962
Query: 648 acaagcatcccgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
||| | || ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 2323963 acagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 2324019
Score = 63.9 bits (32), Expect = 2e-007
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| |||||||| |||||||||| | || ||||||||| | |||||||||
Sbjct: 21525982 cagttcagcaacaaggacctgatcaagcccaagcctggatcctacgtcgcgaggctcacg 21526041
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaag 1081
|||| |||||||| | || | ||||| |||||||||
Sbjct: 21526042 cgcttcgccggcttcatcccgtgcactcccggcaag 21526077
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 363 bits (183), Expect = 2e-097
Identities = 269/295 (91%), Gaps = 2/295 (0%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||| |
Sbjct: 22474268 tccgcgactcgccggagcacttcggcttccgcacccagtccgacggcgacggcatcagca 22474327
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 22474328 tcttcggctccaccaacgtctggctcgaccacctctccctctccaactgccaggacggcc 22474387
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcaccatctccaactgccacctcaccaacc 617
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 22474388 tcatcgacgtcatcgccaagtccaccggagtcaccatctccaactgccacctcaccaacc 22474447
Query: 618 acaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcatgcag 676
|||||||||||||||||||| ||||||||||| | || |||||||||||||||||||
Sbjct: 22474448 acaacgacgtcatgctcttcggctccagcgac-tccttcagcgaggaccagatcatgcag 22474506
Query: 677 atcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaaggt 731
||||||||||| ||||||||||||||| | |||||||| || || ||||| ||||
Sbjct: 22474507 atcaccgtcgctttcaaccacttcggccgcggcctcgtccaaagaatgcccaggt 22474561
Score = 355 bits (179), Expect = 4e-095
Identities = 335/387 (86%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||||||||||||||||||||||||| ||||||| ||||||| |||||||
Sbjct: 22473859 tgcaaggcgacgaacccgatcgaccggtgctggaggtgccgcgccgactgggtgacggac 22473918
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
||||||| |||||||||||||| |||||||||| || ||||||||||| |||||||||
Sbjct: 22473919 aggaagcggctggcgcggtgcgcgcaggggttcggccggaacaccaccggagggctggcc 22473978
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggc 202
|| ||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 22473979 gggaagttctacctggtgacggacggcaccgacgacgacgtggagaacccgcgcccgggg 22474038
Query: 203 acgctccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
|||||||||||||| ||||||||| |||||| |||||||||| |||||||||| ||||
Sbjct: 22474039 acgctccggtggggtgtcatccaggacgagccactgtggatcatcttcgccaaggacatg 22474098
Query: 263 atcatcacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggc 322
||||||| || ||||||||| | || ||| | |||||||||| || ||||| || ||
Sbjct: 22474099 atcatcaacctcaaggaggagatgatgatcaacagcgacaagacgatcgacgggcgggga 22474158
Query: 323 gtgcaggtgcgcatcaccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatc 382
| ||||||||| |||||||| ||||||||| | ||| ||||| | ||||||||| |||
Sbjct: 22474159 gcgcaggtgcggatcaccaatggcgcgcaggtgacggtgcagaactccaacaacgtgatc 22474218
Query: 383 atccacaacatccacatcaacgacatc 409
|||||||||||||||||| ||||||||
Sbjct: 22474219 atccacaacatccacatccacgacatc 22474245
Score = 236 bits (119), Expect = 2e-059
Identities = 230/264 (87%), Gaps = 6/264 (2%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||| ||| || ||||||| |||||| |||||| |||| | ||||| |
Sbjct: 22477691 tccgcgactcgctggagcagttcggcttccgcacccagtccgacagcgatgacatcaaca 22477750
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||
Sbjct: 22477751 tcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacggcc 22477810
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcac----catctccaactgccacctcacc 613
||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 22477811 tcatcgacgtcatcgccaagtccaccggagtcaccatgcatctccaactaccacctcacc 22477870
Query: 614 aaccacaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcat 672
|||||||||||| ||| ||||||||||||||| ||| | || |||||||||||||||
Sbjct: 22477871 aaccacaacgacatcaggctcttcagctccagtgac-tccttcagcgaggaccagatcat 22477929
Query: 673 gcagatcaccgtcgccttcaacca 696
||||||||| ||||||||||||||
Sbjct: 22477930 gcagatcactgtcgccttcaacca 22477953
Score = 208 bits (105), Expect = 5e-051
Identities = 297/361 (82%)
Strand = Plus / Plus
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 22474674 tgccgatggggatttttccacgtggtgaacaacgactacacgcactggctcatgtatgcc 22474733
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||| || |||||| ||| || |||||||||||||| ||| | ||||||||||||||
Sbjct: 22474734 atcggagggagcaagaacccgacgatcatcagccaggggaacaggtacatcgcgccgcca 22474793
Query: 851 aaccttgccgcgaagcaggtcaccaagcagcatgacacgccggagtccgtgtggaagaac 910
||||| || ||||||| | |||| ||||||| | || ||||| | ||||||||||
Sbjct: 22474794 aacctagcggcgaagcggatcacgaagcagctcggggcgacggaggaggagtggaagaac 22474853
Query: 911 tgggtgtggcactccgagaacgacctcttcatggagggcgcctacttcaccgtcaccggc 970
|||||||||||||| ||| | ||||| ||||||||||| |||||||||||| ||||
Sbjct: 22474854 tgggtgtggcactctgaggaggacctgttcatggagggggcctacttcaccacgtccggt 22474913
Query: 971 ggccagatcaacagacagttcaacaagaaggacctcatcaagcccaggaacgggtcctac 1030
|||| |||| | | ||||||| ||| ||||| || |||||||||| | ||| ||||||
Sbjct: 22474914 ggcccgatccagaagcagttcagcaacaaggatctgatcaagcccaagcccggatcctac 22474973
Query: 1031 gtcaccaggctcacgcgctacgccggctccctcgcctgcacgcccggcaagccctgctag 1090
||||| |||||||| |||| ||| |||||| || | ||| | |||||||||| ||||||
Sbjct: 22474974 gtcacgaggctcacccgcttcgctggctccatcccatgcgtggccggcaagccgtgctag 22475033
Query: 1091 a 1091
|
Sbjct: 22475034 a 22475034
Score = 186 bits (94), Expect = 2e-044
Identities = 305/374 (81%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 38 ccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcgcctggcg 97
|||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 22477298 ccgatcgaccggtgctagaggtgccgcaccgactgggcgacggacaggaagcggctggcg 22477357
Query: 98 cggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagttctacgtg 157
| |||||| | |||||||| ||||||||||| ||| ||||||| ||||||||| |
Sbjct: 22477358 ctgtgcgcacaagggttcggcttaaacaccaccggagggttggccgggaagttctaccta 22477417
Query: 158 gtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtggggc 217
|||||||||||||||||||| |||| |||||| |||| ||| || |||||||| |||||
Sbjct: 22477418 gtgacggacggcaccgacgatgacgcggtgaatccgc-cccggggacgctccgttggggt 22477476
Query: 218 gtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcatcacgcttaag 277
|| |||||| |||||| |||||||||| ||| |||||| |||||||||| || |||
Sbjct: 22477477 gtgatccaggacgagccactgtggatcatctttgccaaggagatgatcatcaacctcaag 22477536
Query: 278 gaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatc 337
|||| | | || ||| |||||||||| || ||| | || || | ||| ||||| |||
Sbjct: 22477537 gaggggatgatgatcaatagcgacaagacaatcgacaggcggggagcgcatgtgcggatc 22477596
Query: 338 accaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccac 397
||||| |||| |||| | ||| ||||| | ||||||||| ||||||||||||||||||
Sbjct: 22477597 accaatggcgtgcaggtgacggtgcagaactccaacaacgtgatcatccacaacatccac 22477656
Query: 398 atcaacgacatcgt 411
||| ||||||||||
Sbjct: 22477657 atccacgacatcgt 22477670
Score = 137 bits (69), Expect = 2e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 660 aggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcaga 719
||||| ||||||||||| | || | || ||||||||||| |||| || ||||||||||
Sbjct: 2373180 aggacaagatcatgcaggtaacgctggcattcaaccactttggcaaggggctcgtgcaga 2373239
Query: 720 ggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactacacgcactggc 779
||||||| |||||| | | || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 2373240 ggatgccgaggtgcaggtttggattcttccacatggtgaacaacgactacacgcactggc 2373299
Query: 780 tcatgtacgccatcggcggcagcaaggcccccaccatcatcagccaggg 828
||||||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 2373300 tcatgtacgccatcggcggcaacatgaacccgacgatcatcagccaggg 2373348
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 2377918 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 2377977
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 2377978 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 2378021
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Minus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 2335924 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 2335865
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 2335864 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 2335821
Score = 91.7 bits (46), Expect = 9e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 22478104 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 22478163
Query: 806 gcccccaccatcatcagccagggcaaccgctaca 839
||| || ||||| |||||||| ||||| ||||
Sbjct: 22478164 aacccgacgatcattagccaggggaaccggtaca 22478197
Score = 87.7 bits (44), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 279 aggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatca 338
||||||||||| || | ||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 2372720 aggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcacgtca 2372779
Query: 339 ccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccaca 398
| |||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||
Sbjct: 2372780 c---cggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccaca 2372836
Query: 399 tc 400
||
Sbjct: 2372837 tc 2372838
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 2377564 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 2377623
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 2377624 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 2377683
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 2377684 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 2377743
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 2377744 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 2377790
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Minus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 2336278 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 2336219
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 2336218 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 2336159
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 2336158 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 2336099
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 2336098 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 2336052
Score = 81.8 bits (41), Expect = 8e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 31 gacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcg 90
||||||||||||||||| ||||||||| ||||| || ||||||||| || |||||
Sbjct: 2372472 gacgaacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcg 2372531
Query: 91 cctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagtt 150
||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||||| |
Sbjct: 2372532 gctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagat 2372591
Query: 151 ctacgtggtgacggacg 167
|||| | ||||||||||
Sbjct: 2372592 ctacatcgtgacggacg 2372608
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 2377118 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 2377177
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 2377178 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 2377237
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 2377238 ggcaagatctacgtggtgaccgacgccagcgacgacga 2377275
Score = 75.8 bits (38), Expect = 5e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| ||||| | ||||||| |||| | ||| | |||||| ||||| |
Sbjct: 2372910 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 2372969
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| ||||||||||||||| ||| || | ||||| | | ||||||||||
Sbjct: 2372970 gtccaactgctccgacggcctcatcgacatcaccgacggctccaccgccatcaccatctc 2373029
Query: 598 caactgccacctcaccaa 615
||||| |||| |||||||
Sbjct: 2373030 caactcccacttcaccaa 2373047
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 2336724 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 2336665
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 2336664 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 2336605
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 2336604 ggcaagatctacgtggtgaccgacgccagcgacgacga 2336567
Score = 63.9 bits (32), Expect = 2e-007
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| |||||||| |||||||||| | || ||||||||| | |||||||||
Sbjct: 22478348 cagttcagcaacaaggacctgatcaagcccaagcctggatcctacgtcgcgaggctcacg 22478407
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaag 1081
|||| |||||||| | || | ||||| |||||||||
Sbjct: 22478408 cgcttcgccggcttcatcccgtgcactcccggcaag 22478443
>dbj|AK101009.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023148H12, full
insert sequence
Length = 1825
Score = 238 bits (120), Expect = 6e-060
Identities = 228/264 (86%)
Strand = Plus / Plus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 1011 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 1070
Query: 650 aagcatcccgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggc 709
| | || |||| || | |||||||||||||| || ||||||||||||||| | ||
Sbjct: 1071 tcgtacccgcaggataaggtgatgcagatcaccgtggcgttcaaccacttcggccgtggg 1130
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| | ||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 1131 ctcgtgcagcggatgccgcgatgccggtgggggttcttccacgtcgtcaacaacgactac 1190
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
|||||||||||||||||||||||||||||| ||| | ||| |||||| |||||||||||
Sbjct: 1191 acgcactggctcatgtacgccatcggcggcggcatgagccctaccatcctcagccagggc 1250
Query: 830 aaccgctacatcgcgccgcccaac 853
||||| |||||||| || ||||||
Sbjct: 1251 aaccgatacatcgcccctcccaac 1274
Score = 163 bits (82), Expect = 3e-037
Identities = 253/310 (81%)
Strand = Plus / Plus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 452 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 511
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 512 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 571
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 572 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 631
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | ||||||||||||||||||||||||| ||||| | ||
Sbjct: 632 ccggtggggcgccatgcaggcggcgccgctgtggatcaccttcgccaagtccatggtgat 691
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 692 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 751
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 752 ggtgcacatc 761
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 898 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 957
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 958 tgtccatgtgcgaggacgggctcatcgacgtc 989
>ref|XM_464629.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1825
Score = 238 bits (120), Expect = 6e-060
Identities = 228/264 (86%)
Strand = Plus / Plus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 1011 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 1070
Query: 650 aagcatcccgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggc 709
| | || |||| || | |||||||||||||| || ||||||||||||||| | ||
Sbjct: 1071 tcgtacccgcaggataaggtgatgcagatcaccgtggcgttcaaccacttcggccgtggg 1130
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| | ||||| ||||| ||||||||||| |||||||||||||||
Sbjct: 1131 ctcgtgcagcggatgccgcgatgccggtgggggttcttccacgtcgtcaacaacgactac 1190
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
|||||||||||||||||||||||||||||| ||| | ||| |||||| |||||||||||
Sbjct: 1191 acgcactggctcatgtacgccatcggcggcggcatgagccctaccatcctcagccagggc 1250
Query: 830 aaccgctacatcgcgccgcccaac 853
||||| |||||||| || ||||||
Sbjct: 1251 aaccgatacatcgcccctcccaac 1274
Score = 163 bits (82), Expect = 3e-037
Identities = 253/310 (81%)
Strand = Plus / Plus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 452 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 511
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 512 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 571
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 572 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 631
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | ||||||||||||||||||||||||| ||||| | ||
Sbjct: 632 ccggtggggcgccatgcaggcggcgccgctgtggatcaccttcgccaagtccatggtgat 691
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 692 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 751
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 752 ggtgcacatc 761
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 898 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 957
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 958 tgtccatgtgcgaggacgggctcatcgacgtc 989
>gb|AACV01014424.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014424, whole
genome shotgun sequence
Length = 13752
Score = 236 bits (119), Expect = 2e-059
Identities = 230/264 (87%), Gaps = 6/264 (2%)
Strand = Plus / Plus
Query: 438 tccgcgactcgccggaccacttcggctggcgcaccgtctccgacggcgacggcatcaccg 497
|||||||||||| ||| || ||||||| |||||| |||||| |||| | ||||| |
Sbjct: 3047 tccgcgactcgctggagcagttcggcttccgcacccagtccgacagcgatgacatcaaca 3106
Query: 498 tcttcggctccaccaacgtgtggctggaccacctctccctctccaactgccaggacggcc 557
||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||
Sbjct: 3107 tcttcggctccaccaacgtctagctcgaccacctctccctctccaactgcaaggacggcc 3166
Query: 558 tcatcgacgtcatcgccaagtccactggcgtcac----catctccaactgccacctcacc 613
||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 3167 tcatcgacgtcatcgccaagtccaccggagtcaccatgcatctccaactaccacctcacc 3226
Query: 614 aaccacaacgacgtcatgctcttcagctccagcgacaagcatc-ccgaggaccagatcat 672
|||||||||||| ||| ||||||||||||||| ||| | || |||||||||||||||
Sbjct: 3227 aaccacaacgacatcaggctcttcagctccagtgac-tccttcagcgaggaccagatcat 3285
Query: 673 gcagatcaccgtcgccttcaacca 696
||||||||| ||||||||||||||
Sbjct: 3286 gcagatcactgtcgccttcaacca 3309
Score = 194 bits (98), Expect = 8e-047
Identities = 284/346 (82%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||||||||||||||||||||||||||| |||||||| || ||||||
Sbjct: 45 ttccacgtggtgaacaacgactacacgcactggctcatgtatgccatcggagggagcaag 104
Query: 806 gcccccaccatcatcagccagggcaaccgctacatcgcgccgcccaaccttgccgcgaag 865
|| || |||||||||||||| ||| | |||||||||||||| ||||| || ||||||
Sbjct: 105 aaaccgacgatcatcagccaggggaacaggtacatcgcgccgccaaacctagcggcgaag 164
Query: 866 caggtcaccaagcagcatgacacgccggagtccgtgtggaagaactgggtgtggcactcc 925
| | |||| ||||||| | || ||||| | ||||||||||||||||||||||||
Sbjct: 165 cggatcacgaagcagctcggggcgacggaggaggagtggaagaactgggtgtggcactct 224
Query: 926 gagaacgacctcttcatggagggcgcctacttcaccgtcaccggcggccagatcaacaga 985
||| | ||||| ||||||||||| |||||||||||| |||| |||| |||| | |
Sbjct: 225 gaggaggacctgttcatggagggggcctacttcaccacgtccggtggcccgatccagaag 284
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| ||||| || |||||||||| | ||| ||||||||||| ||||||||
Sbjct: 285 cagttcagcaacaaggatctgatcaagcccaagcccggatcctacgtcacgaggctcacc 344
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaagccctgctaga 1091
|||| ||| |||||| || | ||| | |||||||||| |||||||
Sbjct: 345 cgcttcgctggctccatcccatgcgtggccggcaagccgtgctaga 390
Score = 186 bits (94), Expect = 2e-044
Identities = 305/374 (81%), Gaps = 1/374 (0%)
Strand = Plus / Plus
Query: 38 ccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcgcctggcg 97
|||||||||||||||| | ||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 2654 ccgatcgaccggtgctagaggtgccgcaccgactgggcgacggacaggaagcggctggcg 2713
Query: 98 cggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagttctacgtg 157
| |||||| | |||||||| ||||||||||| ||| ||||||| ||||||||| |
Sbjct: 2714 ctgtgcgcacaagggttcggcttaaacaccaccggagggttggccgggaagttctaccta 2773
Query: 158 gtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtggggc 217
|||||||||||||||||||| |||| |||||| |||| ||| || |||||||| |||||
Sbjct: 2774 gtgacggacggcaccgacgatgacgcggtgaatccgc-cccggggacgctccgttggggt 2832
Query: 218 gtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcatcacgcttaag 277
|| |||||| |||||| |||||||||| ||| |||||| |||||||||| || |||
Sbjct: 2833 gtgatccaggacgagccactgtggatcatctttgccaaggagatgatcatcaacctcaag 2892
Query: 278 gaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatc 337
|||| | | || ||| |||||||||| || ||| | || || | ||| ||||| |||
Sbjct: 2893 gaggggatgatgatcaatagcgacaagacaatcgacaggcggggagcgcatgtgcggatc 2952
Query: 338 accaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccac 397
||||| |||| |||| | ||| ||||| | ||||||||| ||||||||||||||||||
Sbjct: 2953 accaatggcgtgcaggtgacggtgcagaactccaacaacgtgatcatccacaacatccac 3012
Query: 398 atcaacgacatcgt 411
||| ||||||||||
Sbjct: 3013 atccacgacatcgt 3026
Score = 91.7 bits (46), Expect = 9e-016
Identities = 82/94 (87%)
Strand = Plus / Plus
Query: 746 ttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaag 805
||||||||||| ||||| ||||||||||||||||| |||||||||||||| || ||||||
Sbjct: 3460 ttccacgtggtgaacaatgactacacgcactggctgatgtacgccatcggagggagcaag 3519
Query: 806 gcccccaccatcatcagccagggcaaccgctaca 839
||| || ||||| |||||||| ||||| ||||
Sbjct: 3520 aacccgacgatcattagccaggggaaccggtaca 3553
Score = 63.9 bits (32), Expect = 2e-007
Identities = 80/96 (83%)
Strand = Plus / Plus
Query: 986 cagttcaacaagaaggacctcatcaagcccaggaacgggtcctacgtcaccaggctcacg 1045
||||||| ||| |||||||| |||||||||| | || ||||||||| | |||||||||
Sbjct: 3704 cagttcagcaacaaggacctgatcaagcccaagcctggatcctacgtcgcgaggctcacg 3763
Query: 1046 cgctacgccggctccctcgcctgcacgcccggcaag 1081
|||| |||||||| | || | ||||| |||||||||
Sbjct: 3764 cgcttcgccggcttcatcccgtgcactcccggcaag 3799
>dbj|AP004780.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone P0542A02, ***
SEQUENCING IN PROGRESS ***
Length = 137445
Score = 196 bits (99), Expect = 2e-047
Identities = 162/183 (88%)
Strand = Plus / Plus
Query: 671 atgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaagg 730
|||||||||||||| || ||||||||||||||| | || ||||||||| ||||||| |
Sbjct: 126640 atgcagatcaccgtggcgttcaaccacttcggccgtgggctcgtgcagcggatgccgcga 126699
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 126700 tgccggtgggggttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgcc 126759
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||||||| ||| | ||| |||||| |||||||||||||||| |||||||| || |||
Sbjct: 126760 atcggcggcggcatgagccctaccatcctcagccagggcaaccgatacatcgcccctccc 126819
Query: 851 aac 853
|||
Sbjct: 126820 aac 126822
Score = 163 bits (82), Expect = 3e-037
Identities = 253/310 (81%)
Strand = Plus / Plus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 125819 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 125878
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 125879 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 125938
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 125939 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 125998
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | ||||||||||||||||||||||||| ||||| | ||
Sbjct: 125999 ccggtggggcgccatgcaggcggcgccgctgtggatcaccttcgccaagtccatggtgat 126058
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 126059 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 126118
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 126119 ggtgcacatc 126128
Score = 79.8 bits (40), Expect = 3e-012
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 126378 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 126437
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 126265 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 126324
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 126325 tgtccatgtgcgaggacgggctcatcgacgtc 126356
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1006_D05
Length = 128178
Score = 196 bits (99), Expect = 2e-047
Identities = 162/183 (88%)
Strand = Plus / Minus
Query: 671 atgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaagg 730
|||||||||||||| || ||||||||||||||| | || ||||||||| ||||||| |
Sbjct: 41660 atgcagatcaccgtggcgttcaaccacttcggccgtgggctcgtgcagcggatgccgcga 41601
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 41600 tgccggtgggggttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgcc 41541
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||||||| ||| | ||| |||||| |||||||||||||||| |||||||| || |||
Sbjct: 41540 atcggcggcggcatgagccctaccatcctcagccagggcaaccgatacatcgcccctccc 41481
Query: 851 aac 853
|||
Sbjct: 41480 aac 41478
Score = 163 bits (82), Expect = 3e-037
Identities = 253/310 (81%)
Strand = Plus / Minus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 42481 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 42422
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 42421 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 42362
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 42361 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 42302
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | ||||||||||||||||||||||||| ||||| | ||
Sbjct: 42301 ccggtggggcgccatgcaggcggcgccgctgtggatcaccttcgccaagtccatggtgat 42242
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 42241 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 42182
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 42181 ggtgcacatc 42172
Score = 79.8 bits (40), Expect = 3e-012
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 41922 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 41863
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 42035 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 41976
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 41975 tgtccatgtgcgaggacgggctcatcgacgtc 41944
>gb|AACV01003607.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg003607, whole
genome shotgun sequence
Length = 8977
Score = 196 bits (99), Expect = 2e-047
Identities = 162/183 (88%)
Strand = Plus / Plus
Query: 671 atgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaagg 730
|||||||||||||| || ||||||||||||||| | || ||||||||| ||||||| |
Sbjct: 7725 atgcagatcaccgtggcgttcaaccacttcggccgtgggctcgtgcagcggatgccgcga 7784
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7785 tgccggtgggggttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgcc 7844
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||||||| ||| | ||| |||||| |||||||||||||||| |||||||| || |||
Sbjct: 7845 atcggcggcggcatgagccctaccatcctcagccagggcaaccgatacatcgcccctccc 7904
Query: 851 aac 853
|||
Sbjct: 7905 aac 7907
Score = 147 bits (74), Expect = 2e-032
Identities = 252/310 (81%), Gaps = 1/310 (0%)
Strand = Plus / Plus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 6905 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 6964
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 6965 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 7024
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 7025 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 7084
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | |||||||| |||||||||||||||| ||||| | ||
Sbjct: 7085 ccggtggggcgccatgcaggcggcgccgctgt-gatcaccttcgccaagtccatggtgat 7143
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 7144 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 7203
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 7204 ggtgcacatc 7213
Score = 79.8 bits (40), Expect = 3e-012
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 7463 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 7522
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Plus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 7350 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 7409
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 7410 tgtccatgtgcgaggacgggctcatcgacgtc 7441
>ref|NT_107178.1| Oryza sativa (japonica cultivar-group)
Length = 7645238
Score = 196 bits (99), Expect = 2e-047
Identities = 162/183 (88%)
Strand = Plus / Minus
Query: 671 atgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaagg 730
|||||||||||||| || ||||||||||||||| | || ||||||||| ||||||| |
Sbjct: 430049 atgcagatcaccgtggcgttcaaccacttcggccgtgggctcgtgcagcggatgccgcga 429990
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 429989 tgccggtgggggttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgcc 429930
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||||||| ||| | ||| |||||| |||||||||||||||| |||||||| || |||
Sbjct: 429929 atcggcggcggcatgagccctaccatcctcagccagggcaaccgatacatcgcccctccc 429870
Query: 851 aac 853
|||
Sbjct: 429869 aac 429867
Score = 163 bits (82), Expect = 3e-037
Identities = 253/310 (81%)
Strand = Plus / Minus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 430870 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 430811
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 430810 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 430751
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 430750 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 430691
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | ||||||||||||||||||||||||| ||||| | ||
Sbjct: 430690 ccggtggggcgccatgcaggcggcgccgctgtggatcaccttcgccaagtccatggtgat 430631
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 430630 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 430571
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 430570 ggtgcacatc 430561
Score = 79.8 bits (40), Expect = 3e-012
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 430311 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 430252
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 430424 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 430365
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 430364 tgtccatgtgcgaggacgggctcatcgacgtc 430333
>gb|CH401169.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000006 genomic
scaffold, whole genome shotgun sequence
Length = 13452964
Score = 196 bits (99), Expect = 2e-047
Identities = 162/183 (88%)
Strand = Plus / Minus
Query: 671 atgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaagg 730
|||||||||||||| || ||||||||||||||| | || ||||||||| ||||||| |
Sbjct: 6517725 atgcagatcaccgtggcgttcaaccacttcggccgtgggctcgtgcagcggatgccgcga 6517666
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6517665 tgccggtgggggttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgcc 6517606
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||||||| ||| | ||| |||||| |||||||||||||||| |||||||| || |||
Sbjct: 6517605 atcggcggcggcatgagccctaccatcctcagccagggcaaccgatacatcgcccctccc 6517546
Query: 851 aac 853
|||
Sbjct: 6517545 aac 6517543
Score = 147 bits (74), Expect = 2e-032
Identities = 252/310 (81%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 6518545 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 6518486
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 6518485 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 6518426
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 6518425 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 6518366
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | |||||||| |||||||||||||||| ||||| | ||
Sbjct: 6518365 ccggtggggcgccatgcaggcggcgccgctgt-gatcaccttcgccaagtccatggtgat 6518307
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 6518306 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 6518247
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 6518246 ggtgcacatc 6518237
Score = 79.8 bits (40), Expect = 3e-012
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 6517987 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 6517928
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 6518100 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 6518041
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 6518040 tgtccatgtgcgaggacgggctcatcgacgtc 6518009
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 196 bits (99), Expect = 2e-047
Identities = 162/183 (88%)
Strand = Plus / Minus
Query: 671 atgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaagg 730
|||||||||||||| || ||||||||||||||| | || ||||||||| ||||||| |
Sbjct: 6517725 atgcagatcaccgtggcgttcaaccacttcggccgtgggctcgtgcagcggatgccgcga 6517666
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6517665 tgccggtgggggttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgcc 6517606
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||||||| ||| | ||| |||||| |||||||||||||||| |||||||| || |||
Sbjct: 6517605 atcggcggcggcatgagccctaccatcctcagccagggcaaccgatacatcgcccctccc 6517546
Query: 851 aac 853
|||
Sbjct: 6517545 aac 6517543
Score = 147 bits (74), Expect = 2e-032
Identities = 252/310 (81%), Gaps = 1/310 (0%)
Strand = Plus / Minus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 6518545 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 6518486
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 6518485 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 6518426
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 6518425 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 6518366
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | |||||||| |||||||||||||||| ||||| | ||
Sbjct: 6518365 ccggtggggcgccatgcaggcggcgccgctgt-gatcaccttcgccaagtccatggtgat 6518307
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 6518306 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 6518247
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 6518246 ggtgcacatc 6518237
Score = 79.8 bits (40), Expect = 3e-012
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 6517987 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 6517928
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 6518100 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 6518041
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 6518040 tgtccatgtgcgaggacgggctcatcgacgtc 6518009
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 196 bits (99), Expect = 2e-047
Identities = 162/183 (88%)
Strand = Plus / Minus
Query: 671 atgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcagaggatgccaagg 730
|||||||||||||| || ||||||||||||||| | || ||||||||| ||||||| |
Sbjct: 6399667 atgcagatcaccgtggcgttcaaccacttcggccgtgggctcgtgcagcggatgccgcga 6399608
Query: 731 tgccgctggggcttcttccacgtggtcaacaacgactacacgcactggctcatgtacgcc 790
||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6399607 tgccggtgggggttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgcc 6399548
Query: 791 atcggcggcagcaaggcccccaccatcatcagccagggcaaccgctacatcgcgccgccc 850
||||||||| ||| | ||| |||||| |||||||||||||||| |||||||| || |||
Sbjct: 6399547 atcggcggcggcatgagccctaccatcctcagccagggcaaccgatacatcgcccctccc 6399488
Query: 851 aac 853
|||
Sbjct: 6399487 aac 6399485
Score = 163 bits (82), Expect = 3e-037
Identities = 253/310 (81%)
Strand = Plus / Minus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 6400488 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 6400429
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 6400428 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 6400369
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| |||||||||
Sbjct: 6400368 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggcacgct 6400309
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatgatcat 267
||||||||||| ||| ||| | ||||||||||||||||||||||||| ||||| | ||
Sbjct: 6400308 ccggtggggcgccatgcaggcggcgccgctgtggatcaccttcgccaagtccatggtgat 6400249
Query: 268 cacgcttaaggaggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgca 327
| || | | |||||||| || || | ||||||||||||| ||||||||||||| |||
Sbjct: 6400248 ccgcctcacgcaggagctcctcgtcgccagcgacaagaccatcgacggccgcggcgcgca 6400189
Query: 328 ggtgcgcatc 337
||||| ||||
Sbjct: 6400188 ggtgcacatc 6400179
Score = 79.8 bits (40), Expect = 3e-012
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 590 accatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgac 649
|||||||||||| ||||| ||||||||||||||||||||||||| ||| || ||||||||
Sbjct: 6399929 accatctccaacagccacttcaccaaccacaacgacgtcatgctgttcggcgccagcgac 6399870
Score = 71.9 bits (36), Expect = 8e-010
Identities = 78/92 (84%)
Strand = Plus / Minus
Query: 477 ccgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccc 536
||||||||||||||||| | |||||| | ||||| |||||||| |||||||| |||||
Sbjct: 6400042 ccgacggcgacggcatctcgctcttcgccgccaccgacgtgtgggtggaccacgtctcca 6399983
Query: 537 tctccaactgccaggacggcctcatcgacgtc 568
| |||| ||| ||||||| ||||||||||||
Sbjct: 6399982 tgtccatgtgcgaggacgggctcatcgacgtc 6399951
>dbj|AK070509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054E18, full
insert sequence
Length = 1870
Score = 137 bits (69), Expect = 2e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 660 aggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcaga 719
||||| ||||||||||| | || | || ||||||||||| |||| || ||||||||||
Sbjct: 1112 aggacaagatcatgcaggtaacgctggcattcaaccactttggcaaggggctcgtgcaga 1171
Query: 720 ggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactacacgcactggc 779
||||||| |||||| | | || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 1172 ggatgccgaggtgcaggtttggattcttccacatggtgaacaacgactacacgcactggc 1231
Query: 780 tcatgtacgccatcggcggcagcaaggcccccaccatcatcagccaggg 828
||||||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 1232 tcatgtacgccatcggcggcaacatgaacccgacgatcatcagccaggg 1280
Score = 87.7 bits (44), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 279 aggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatca 338
||||||||||| || | ||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 740 aggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcacgtca 799
Query: 339 ccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccaca 398
| |||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||
Sbjct: 800 c---cggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccaca 856
Query: 399 tc 400
||
Sbjct: 857 tc 858
Score = 81.8 bits (41), Expect = 8e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 31 gacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcg 90
||||||||||||||||| ||||||||| ||||| || ||||||||| || |||||
Sbjct: 492 gacgaacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcg 551
Query: 91 cctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagtt 150
||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||||| |
Sbjct: 552 gctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagat 611
Query: 151 ctacgtggtgacggacg 167
|||| | ||||||||||
Sbjct: 612 ctacatcgtgacggacg 628
Score = 75.8 bits (38), Expect = 5e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| ||||| | ||||||| |||| | ||| | |||||| ||||| |
Sbjct: 930 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 989
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| ||||||||||||||| ||| || | ||||| | | ||||||||||
Sbjct: 990 gtccaactgctccgacggcctcatcgacatcaccgacggctccaccgccatcaccatctc 1049
Query: 598 caactgccacctcaccaa 615
||||| |||| |||||||
Sbjct: 1050 caactcccacttcaccaa 1067
>gb|AACV01013018.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013018, whole
genome shotgun sequence
Length = 32067
Score = 137 bits (69), Expect = 2e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 660 aggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcaga 719
||||| ||||||||||| | || | || ||||||||||| |||| || ||||||||||
Sbjct: 7639 aggacaagatcatgcaggtaacgctggcattcaaccactttggcaaggggctcgtgcaga 7698
Query: 720 ggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactacacgcactggc 779
||||||| |||||| | | || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 7699 ggatgccgaggtgcaggtttggattcttccacatggtgaacaacgactacacgcactggc 7758
Query: 780 tcatgtacgccatcggcggcagcaaggcccccaccatcatcagccaggg 828
||||||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 7759 tcatgtacgccatcggcggcaacatgaacccgacgatcatcagccaggg 7807
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 12377 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 12436
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 12437 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 12480
Score = 87.7 bits (44), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 279 aggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatca 338
||||||||||| || | ||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 7179 aggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcacgtca 7238
Query: 339 ccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccaca 398
| |||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||
Sbjct: 7239 c---cggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccaca 7295
Query: 399 tc 400
||
Sbjct: 7296 tc 7297
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 12023 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 12082
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 12083 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 12142
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 12143 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 12202
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 12203 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 12249
Score = 81.8 bits (41), Expect = 8e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 31 gacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcg 90
||||||||||||||||| ||||||||| ||||| || ||||||||| || |||||
Sbjct: 6931 gacgaacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcg 6990
Query: 91 cctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagtt 150
||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||||| |
Sbjct: 6991 gctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagat 7050
Query: 151 ctacgtggtgacggacg 167
|||| | ||||||||||
Sbjct: 7051 ctacatcgtgacggacg 7067
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 11577 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 11636
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 11637 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 11696
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 11697 ggcaagatctacgtggtgaccgacgccagcgacgacga 11734
Score = 75.8 bits (38), Expect = 5e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| ||||| | ||||||| |||| | ||| | |||||| ||||| |
Sbjct: 7369 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 7428
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| ||||||||||||||| ||| || | ||||| | | ||||||||||
Sbjct: 7429 gtccaactgctccgacggcctcatcgacatcaccgacggctccaccgccatcaccatctc 7488
Query: 598 caactgccacctcaccaa 615
||||| |||| |||||||
Sbjct: 7489 caactcccacttcaccaa 7506
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0007O20
Length = 147363
Score = 137 bits (69), Expect = 2e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 660 aggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcaga 719
||||| ||||||||||| | || | || ||||||||||| |||| || ||||||||||
Sbjct: 94981 aggacaagatcatgcaggtaacgctggcattcaaccactttggcaaggggctcgtgcaga 95040
Query: 720 ggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactacacgcactggc 779
||||||| |||||| | | || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 95041 ggatgccgaggtgcaggtttggattcttccacatggtgaacaacgactacacgcactggc 95100
Query: 780 tcatgtacgccatcggcggcagcaaggcccccaccatcatcagccaggg 828
||||||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 95101 tcatgtacgccatcggcggcaacatgaacccgacgatcatcagccaggg 95149
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 99719 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 99778
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 99779 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 99822
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Minus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 57725 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 57666
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 57665 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 57622
Score = 87.7 bits (44), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 279 aggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatca 338
||||||||||| || | ||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 94521 aggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcacgtca 94580
Query: 339 ccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccaca 398
| |||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||
Sbjct: 94581 c---cggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccaca 94637
Query: 399 tc 400
||
Sbjct: 94638 tc 94639
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 99365 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 99424
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 99425 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 99484
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 99485 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 99544
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 99545 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 99591
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Minus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 58079 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 58020
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 58019 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 57960
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 57959 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 57900
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 57899 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 57853
Score = 81.8 bits (41), Expect = 8e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 31 gacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcg 90
||||||||||||||||| ||||||||| ||||| || ||||||||| || |||||
Sbjct: 94273 gacgaacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcg 94332
Query: 91 cctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagtt 150
||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||||| |
Sbjct: 94333 gctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagat 94392
Query: 151 ctacgtggtgacggacg 167
|||| | ||||||||||
Sbjct: 94393 ctacatcgtgacggacg 94409
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 98919 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 98978
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 98979 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 99038
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 99039 ggcaagatctacgtggtgaccgacgccagcgacgacga 99076
Score = 75.8 bits (38), Expect = 5e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| ||||| | ||||||| |||| | ||| | |||||| ||||| |
Sbjct: 94711 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 94770
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| ||||||||||||||| ||| || | ||||| | | ||||||||||
Sbjct: 94771 gtccaactgctccgacggcctcatcgacatcaccgacggctccaccgccatcaccatctc 94830
Query: 598 caactgccacctcaccaa 615
||||| |||| |||||||
Sbjct: 94831 caactcccacttcaccaa 94848
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 58525 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 58466
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 58465 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 58406
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 58405 ggcaagatctacgtggtgaccgacgccagcgacgacga 58368
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0036F10
Length = 149415
Score = 137 bits (69), Expect = 2e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 660 aggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcaga 719
||||| ||||||||||| | || | || ||||||||||| |||| || ||||||||||
Sbjct: 4638 aggacaagatcatgcaggtaacgctggcattcaaccactttggcaaggggctcgtgcaga 4697
Query: 720 ggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactacacgcactggc 779
||||||| |||||| | | || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 4698 ggatgccgaggtgcaggtttggattcttccacatggtgaacaacgactacacgcactggc 4757
Query: 780 tcatgtacgccatcggcggcagcaaggcccccaccatcatcagccaggg 828
||||||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 4758 tcatgtacgccatcggcggcaacatgaacccgacgatcatcagccaggg 4806
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 9376 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 9435
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 9436 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 9479
Score = 87.7 bits (44), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 279 aggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatca 338
||||||||||| || | ||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 4178 aggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcacgtca 4237
Query: 339 ccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccaca 398
| |||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||
Sbjct: 4238 c---cggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccaca 4294
Query: 399 tc 400
||
Sbjct: 4295 tc 4296
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 9022 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 9081
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 9082 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 9141
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 9142 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 9201
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 9202 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 9248
Score = 81.8 bits (41), Expect = 8e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 31 gacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcg 90
||||||||||||||||| ||||||||| ||||| || ||||||||| || |||||
Sbjct: 3930 gacgaacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcg 3989
Query: 91 cctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagtt 150
||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||||| |
Sbjct: 3990 gctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagat 4049
Query: 151 ctacgtggtgacggacg 167
|||| | ||||||||||
Sbjct: 4050 ctacatcgtgacggacg 4066
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 8576 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 8635
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 8636 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 8695
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 8696 ggcaagatctacgtggtgaccgacgccagcgacgacga 8733
Score = 75.8 bits (38), Expect = 5e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| ||||| | ||||||| |||| | ||| | |||||| ||||| |
Sbjct: 4368 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 4427
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| ||||||||||||||| ||| || | ||||| | | ||||||||||
Sbjct: 4428 gtccaactgctccgacggcctcatcgacatcaccgacggctccaccgccatcaccatctc 4487
Query: 598 caactgccacctcaccaa 615
||||| |||| |||||||
Sbjct: 4488 caactcccacttcaccaa 4505
>ref|NT_107230.2| Oryza sativa (japonica cultivar-group)
Length = 2805126
Score = 137 bits (69), Expect = 2e-029
Identities = 144/169 (85%)
Strand = Plus / Plus
Query: 660 aggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcaga 719
||||| ||||||||||| | || | || ||||||||||| |||| || ||||||||||
Sbjct: 2336757 aggacaagatcatgcaggtaacgctggcattcaaccactttggcaaggggctcgtgcaga 2336816
Query: 720 ggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactacacgcactggc 779
||||||| |||||| | | || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 2336817 ggatgccgaggtgcaggtttggattcttccacatggtgaacaacgactacacgcactggc 2336876
Query: 780 tcatgtacgccatcggcggcagcaaggcccccaccatcatcagccaggg 828
||||||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 2336877 tcatgtacgccatcggcggcaacatgaacccgacgatcatcagccaggg 2336925
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 2341495 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 2341554
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 2341555 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 2341598
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Minus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 2299501 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 2299442
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 2299441 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 2299398
Score = 87.7 bits (44), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Plus
Query: 279 aggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatca 338
||||||||||| || | ||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 2336297 aggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcacgtca 2336356
Query: 339 ccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccaca 398
| |||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||
Sbjct: 2336357 c---cggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccaca 2336413
Query: 399 tc 400
||
Sbjct: 2336414 tc 2336415
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 2341141 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 2341200
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 2341201 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 2341260
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 2341261 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 2341320
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 2341321 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 2341367
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Minus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 2299855 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 2299796
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 2299795 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 2299736
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 2299735 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 2299676
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 2299675 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 2299629
Score = 81.8 bits (41), Expect = 8e-013
Identities = 113/137 (82%)
Strand = Plus / Plus
Query: 31 gacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcg 90
||||||||||||||||| ||||||||| ||||| || ||||||||| || |||||
Sbjct: 2336049 gacgaacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcg 2336108
Query: 91 cctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagtt 150
||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||||| |
Sbjct: 2336109 gctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagat 2336168
Query: 151 ctacgtggtgacggacg 167
|||| | ||||||||||
Sbjct: 2336169 ctacatcgtgacggacg 2336185
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 2340695 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 2340754
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 2340755 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 2340814
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 2340815 ggcaagatctacgtggtgaccgacgccagcgacgacga 2340852
Score = 75.8 bits (38), Expect = 5e-011
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| ||||| | ||||||| |||| | ||| | |||||| ||||| |
Sbjct: 2336487 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 2336546
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| ||||||||||||||| ||| || | ||||| | | ||||||||||
Sbjct: 2336547 gtccaactgctccgacggcctcatcgacatcaccgacggctccaccgccatcaccatctc 2336606
Query: 598 caactgccacctcaccaa 615
||||| |||| |||||||
Sbjct: 2336607 caactcccacttcaccaa 2336624
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 2300301 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 2300242
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 2300241 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 2300182
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 2300181 ggcaagatctacgtggtgaccgacgccagcgacgacga 2300144
>gb|CH401209.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000046 genomic
scaffold, whole genome shotgun sequence
Length = 8607552
Score = 137 bits (69), Expect = 2e-029
Identities = 144/169 (85%)
Strand = Plus / Minus
Query: 660 aggaccagatcatgcagatcaccgtcgccttcaaccacttcggcagaggcctcgtgcaga 719
||||| ||||||||||| | || | || ||||||||||| |||| || ||||||||||
Sbjct: 2290530 aggacaagatcatgcaggtaacgctggcattcaaccactttggcaaggggctcgtgcaga 2290471
Query: 720 ggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactacacgcactggc 779
||||||| |||||| | | || ||||||||| |||| ||||||||||||||||||||||
Sbjct: 2290470 ggatgccgaggtgcaggtttggattcttccacatggtgaacaacgactacacgcactggc 2290411
Query: 780 tcatgtacgccatcggcggcagcaaggcccccaccatcatcagccaggg 828
||||||||||||||||||||| || | ||| || ||||||||||||||
Sbjct: 2290410 tcatgtacgccatcggcggcaacatgaacccgacgatcatcagccaggg 2290362
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 2324147 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 2324206
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 2324207 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 2324250
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Minus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 2285792 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 2285733
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 2285732 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 2285689
Score = 87.7 bits (44), Expect = 1e-014
Identities = 103/122 (84%), Gaps = 3/122 (2%)
Strand = Plus / Minus
Query: 279 aggagctcatcatccgcggcgacaagaccattgacggccgcggcgtgcaggtgcgcatca 338
||||||||||| || | ||||||||||||| ||||||||||||| |||||||| | |||
Sbjct: 2290990 aggagctcatcgtcaccagcgacaagaccatcgacggccgcggcgcgcaggtgcacgtca 2290931
Query: 339 ccaacggcgcgcagctcacgttgcagttcgtcaacaacgtcatcatccacaacatccaca 398
| |||||||||| ||||| ||||| || | ||||||||||||||||||| ||||||
Sbjct: 2290930 c---cggcgcgcagatcacggtgcaggcggtgagcaacgtcatcatccacaacctccaca 2290874
Query: 399 tc 400
||
Sbjct: 2290873 tc 2290872
Score = 85.7 bits (43), Expect = 5e-014
Identities = 181/227 (79%)
Strand = Plus / Minus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 2286146 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 2286087
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 2286086 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 2286027
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || ||||| ||| | |
Sbjct: 2286026 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagcaacagcgacgc 2285967
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 2285966 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 2285920
Score = 81.8 bits (41), Expect = 8e-013
Identities = 113/137 (82%)
Strand = Plus / Minus
Query: 31 gacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaagcg 90
||||||||||||||||| ||||||||| ||||| || ||||||||| || |||||
Sbjct: 2291238 gacgaacccgatcgacctgtgctggcgctgccgcaagaactgggcgagccgtcgcaagcg 2291179
Query: 91 cctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaagtt 150
||||| |||||||| ||||||||| | ||| ||||||||||||| ||||||||| |
Sbjct: 2291178 gctggccaagtgcgccatggggttcggccacaaggccaccggcgggctcgccggcaagat 2291119
Query: 151 ctacgtggtgacggacg 167
|||| | ||||||||||
Sbjct: 2291118 ctacatcgtgacggacg 2291102
Score = 75.8 bits (38), Expect = 5e-011
Identities = 113/138 (81%)
Strand = Plus / Minus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| ||||| | ||||||| |||| | ||| | |||||| ||||| |
Sbjct: 2290800 cgacggcgacggcatctccgtcatgggctccagcaacatctggatcgaccacgtctccat 2290741
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| ||||||||||||||| ||| || | ||||| | | ||||||||||
Sbjct: 2290740 gtccaactgctccgacggcctcatcgacatcaccgacggctccaccgccatcaccatctc 2290681
Query: 598 caactgccacctcaccaa 615
||||| |||| |||||||
Sbjct: 2290680 caactcccacttcaccaa 2290663
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Minus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 2286592 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 2286533
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 2286532 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 2286473
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 2286472 ggcaagatctacgtggtgaccgacgccagcgacgacga 2286435
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 588 tcaccatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcg 647
||||||||||||| ||||| ||||||| ||| || |||||||||||||| || |||||
Sbjct: 2323903 tcaccatctccaaaggccacttcaccaagcacgaccacgtcatgctcttcggcgccagca 2323962
Query: 648 acaagcatcccgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
||| | || ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 2323963 acagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 2324019
>gb|AQ862064.1|AQ862064 nbeb0018O13f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0018O13f, DNA sequence
Length = 787
Score = 129 bits (65), Expect = 4e-027
Identities = 192/235 (81%)
Strand = Plus / Plus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 407 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 466
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 467 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgttcgcggcaa 526
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| ||| |||||
Sbjct: 527 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggnacgct 586
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaagaccatg 262
||||||||||| ||| || | ||||||||||||||||||||||||| |||||
Sbjct: 587 ccggtggggcgccatgcangcggcgccgctgtggatcaccttcgccaagtccatg 641
Score = 50.1 bits (25), Expect = 0.003
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 297 gcgacaagaccattgacggccgcggcgtgcaggtgcgcatc 337
||||||||||||| ||||||||||||| ||| |||| ||||
Sbjct: 676 gcgacaagaccatcgacggccgcggcgcgcatgtgcacatc 716
>gb|AQ865437.1|AQ865437 nbeb0025I06f CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone nbeb0025I06f, DNA sequence
Length = 714
Score = 129 bits (65), Expect = 4e-027
Identities = 187/228 (82%)
Strand = Plus / Plus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || ||||||||
Sbjct: 404 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgaccggaa 463
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggccggcaa 147
||| || || |||||||||| ||| ||||| ||| | |||||||||| | ||||||
Sbjct: 464 gcggctcgcccggtgcgccatgggcttcggccgcggcgccaccggcggcgtccgcggcaa 523
Query: 148 gttctacgtggtgacggacggcaccgacgacgacgtggtgaacccgcgccccggcacgct 207
| ||||||| || || ||| | ||||| ||||| | ||||||||| ||| |||||
Sbjct: 524 gatctacgtcgtcaccgaccccggcgacggcgacgccgccaacccgcgctacggnacgct 583
Query: 208 ccggtggggcgtcatccagatcgagccgctgtggatcaccttcgccaa 255
||||||||||| ||| ||| | ||||||||||||||||||||||||
Sbjct: 584 ccggtggggcgccatgcaggcggcgccgctgtggatcaccttcgccaa 631
>gb|CZ444110.1|CZ444110 UCDRdSpm486_3.1 UCD RdSpm Rice Insertions Oryza sativa (japonica
cultivar-group) genomic clone RdSpm486_3.1, DNA sequence
Length = 439
Score = 125 bits (63), Expect = 6e-026
Identities = 90/99 (90%)
Strand = Plus / Minus
Query: 755 gtcaacaacgactacacgcactggctcatgtacgccatcggcggcagcaaggcccccacc 814
||||||||||||||||||||||||||||||||||||||||||||| ||| | ||| |||
Sbjct: 439 gtcaacaacgactacacgcactggctcatgtacgccatcggcggcggcatgagccctacc 380
Query: 815 atcatcagccagggcaaccgctacatcgcgccgcccaac 853
||| |||||||||||||||| |||||||| || ||||||
Sbjct: 379 atcctcagccagggcaaccgatacatcgcccctcccaac 341
>gb|C73240.1|C73240 C73240 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E3490_1A, mRNA sequence
Length = 405
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 22 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 81
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 82 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 125
>gb|CV733041.1|CV733041 FLO--07-M13.b1 Rice flower lambda phage cDNA library (FLO) Oryza
sativa (japonica cultivar-group) cDNA clone FLO--07-M13,
mRNA sequence
Length = 503
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 195 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 254
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 255 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 298
Score = 81.8 bits (41), Expect = 8e-013
Identities = 98/117 (83%)
Strand = Plus / Plus
Query: 588 tcaccatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcg 647
|||||||||||||| ||||| ||||||| ||| || |||||||||||||| || |||||
Sbjct: 49 tcaccatctccaacggccacttcaccaagcacgaccacgtcatgctcttcggcgccagca 108
Query: 648 acaagcatcccgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
||| | || ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 109 acagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 165
>dbj|AK100191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035P11, full
insert sequence
Length = 1659
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 1161 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 1220
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 1221 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 1264
Score = 77.8 bits (39), Expect = 1e-011
Identities = 180/227 (79%)
Strand = Plus / Plus
Query: 478 cgacggcgacggcatcaccgtcttcggctccaccaacgtgtggctggaccacctctccct 537
|||||||||||||||| || || | |||| ||||| | ||| | |||||| ||||| |
Sbjct: 905 cgacggcgacggcatctccatcatgtcctcctccaacatctggatcgaccacgtctccat 964
Query: 538 ctccaactgccaggacggcctcatcgacgtcatcgccaagtccactggcgtcaccatctc 597
||||||||| |||||||||||||||| | || | ||||| | | ||||||||||
Sbjct: 965 gtccaactgctccgacggcctcatcgacgccgtcagcggctccaccgccatcaccatctc 1024
Query: 598 caactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcgacaagcatcc 657
|||| ||||| ||||||| ||| || |||||||||||||| || || || ||| | |
Sbjct: 1025 caacggccacttcaccaagcacgaccacgtcatgctcttcggcgccggcaacagcgacgc 1084
Query: 658 cgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
| ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 1085 ccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 1131
Score = 75.8 bits (38), Expect = 5e-011
Identities = 128/158 (81%)
Strand = Plus / Plus
Query: 23 tgcagggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggac 82
|||| |||||| ||||| |||||||| |||||||| ||||| | |||||||| || |||
Sbjct: 459 tgcatggcgaccaaccccatcgaccgctgctggcgctgccgcgacgactgggccaccgac 518
Query: 83 cggaagcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgggctggcc 142
|||||||| ||||||||||||| | |||||||| | || ||| |||||| ||
Sbjct: 519 cggaagcggctggcgcggtgcgtccgtgggttcggccacaggaccgtcggcggcgccgct 578
Query: 143 ggcaagttctacgtggtgacggacggcaccgacgacga 180
|||||| ||||||||||||| |||| || |||||||||
Sbjct: 579 ggcaagatctacgtggtgaccgacgccagcgacgacga 616
>gb|AACV01013020.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg013020,
whole genome shotgun sequence
Length = 5783
Score = 111 bits (56), Expect = 9e-022
Identities = 92/104 (88%)
Strand = Plus / Plus
Query: 743 ttcttccacgtggtcaacaacgactacacgcactggctcatgtacgccatcggcggcagc 802
||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct: 334 ttcttccacgtcgtcaacaacgactacacgcactggctcatgtacgccatcggtggcaac 393
Query: 803 aaggcccccaccatcatcagccagggcaaccgctacatcgcgcc 846
| | ||| || |||||||||||||| ||| | | |||||||||
Sbjct: 394 atgaacccgacgatcatcagccaggggaacaggttcatcgcgcc 437
Score = 73.8 bits (37), Expect = 2e-010
Identities = 97/117 (82%)
Strand = Plus / Plus
Query: 588 tcaccatctccaactgccacctcaccaaccacaacgacgtcatgctcttcagctccagcg 647
||||||||||||| ||||| ||||||| ||| || |||||||||||||| || |||||
Sbjct: 90 tcaccatctccaaaggccacttcaccaagcacgaccacgtcatgctcttcggcgccagca 149
Query: 648 acaagcatcccgaggaccagatcatgcagatcaccgtcgccttcaaccacttcggca 704
||| | || ||||| || | |||||||||||||| || ||||||||||||||||
Sbjct: 150 acagcgacgcccaggacgaggtgatgcagatcaccgtggcgttcaaccacttcggca 206
>gb|AZ129643.1|AZ129643 OSJNBb0064C01r CUGI Rice BAC Library (EcoRI) Oryza sativa (japonica
cultivar-group) genomic clone OSJNBb0064C01r, DNA
sequence
Length = 887
Score = 87.7 bits (44), Expect = 1e-014
Identities = 92/108 (85%)
Strand = Plus / Plus
Query: 28 ggcgacgaacccgatcgaccggtgctggcggtgccggcaggactgggcgacggaccggaa 87
|||||||||||||||||||||||||||||| ||||| |||||||||| || |||| |||
Sbjct: 374 ggcgacgaacccgatcgaccggtgctggcgctgccgcaaggactgggccaccgacccgaa 433
Query: 88 gcgcctggcgcggtgcgccaaggggttcgggcgcaacaccaccggcgg 135
||| || || | |||||||| ||| ||||| ||| | ||||||||||
Sbjct: 434 gcggctcgcccagtgcgccatgggcttcggccgcggcgccaccggcgg 481
>gb|AC034258.10| Oryza sativa chromosome 10 BAC OSJNBb0011A08 genomic sequence, complete
sequence
Length = 117157
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Plus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 112330 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 112389
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 112390 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 112449
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 112450 aaccgctacatcgc 112463
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 111999 caacgtcatcatccacaacatccacgtccacgac 112032
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 112075 cactacgggtggcgcacccgctccgacggcgacggcatc 112113
>gb|AC025905.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0018F16,
complete sequence
Length = 179157
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 124635 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 124576
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 124575 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 124516
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 124515 aaccgctacatcgc 124502
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 124966 caacgtcatcatccacaacatccacgtccacgac 124933
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 124890 cactacgggtggcgcacccgctccgacggcgacggcatc 124852
>gb|AACV01021719.1| Oryza sativa (japonica cultivar-group) chromosome 10 Ctg021719, whole
genome shotgun sequence
Length = 27956
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 11409 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 11350
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 11349 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 11290
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 11289 aaccgctacatcgc 11276
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 11740 caacgtcatcatccacaacatccacgtccacgac 11707
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 11664 cactacgggtggcgcacccgctccgacggcgacggcatc 11626
>ref|NM_196827.1| Oryza sativa (japonica cultivar-group) putative pectate lyase
(OSJNBa0018F16.19), mRNA
Length = 1404
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Plus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 892 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 951
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 952 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 1011
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 1012 aaccgctacatcgc 1025
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 561 caacgtcatcatccacaacatccacgtccacgac 594
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 637 cactacgggtggcgcacccgctccgacggcgacggcatc 675
>ref|NT_080067.1| Oryza sativa (japonica cultivar-group) chromosome 10
Length = 4809259
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 2977377 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 2977318
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 2977317 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 2977258
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 2977257 aaccgctacatcgc 2977244
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 2977708 caacgtcatcatccacaacatccacgtccacgac 2977675
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 2977632 cactacgggtggcgcacccgctccgacggcgacggcatc 2977594
>gb|CH401254.1| Oryza sativa (japonica cultivar-group) chromosome 10 scaffold000091 genomic
scaffold, whole genome shotgun sequence
Length = 10615099
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 4189305 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 4189246
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 4189245 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 4189186
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 4189185 aaccgctacatcgc 4189172
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 4189636 caacgtcatcatccacaacatccacgtccacgac 4189603
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 4189560 cactacgggtggcgcacccgctccgacggcgacggcatc 4189522
>gb|CM000147.1| Oryza sativa (japonica cultivar-group) chromosome 10, whole genome shotgun
sequence
Length = 21480893
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 15055099 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 15055040
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 15055039 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 15054980
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 15054979 aaccgctacatcgc 15054966
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 15055430 caacgtcatcatccacaacatccacgtccacgac 15055397
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 15055354 cactacgggtggcgcacccgctccgacggcgacggcatc 15055316
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 16245746 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 16245687
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 16245686 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 16245627
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 16245626 aaccgctacatcgc 16245613
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 16246077 caacgtcatcatccacaacatccacgtccacgac 16246044
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 16246001 cactacgggtggcgcacccgctccgacggcgacggcatc 16245963
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 75.8 bits (38), Expect = 5e-011
Identities = 110/134 (82%)
Strand = Plus / Minus
Query: 710 ctcgtgcagaggatgccaaggtgccgctggggcttcttccacgtggtcaacaacgactac 769
||||||||| ||||||| ||||| | |||| | ||||||| | |||||||||||||||
Sbjct: 16253987 ctcgtgcagcggatgcctcggtgcaggagggggtacttccacatcgtcaacaacgactac 16253928
Query: 770 acgcactggctcatgtacgccatcggcggcagcaaggcccccaccatcatcagccagggc 829
||| ||| ||||||||||| || || ||| | ||||||||||| ||||||||||
Sbjct: 16253927 acggcgtgggagatgtacgccattggagggagcgcgagccccaccatcaacagccagggc 16253868
Query: 830 aaccgctacatcgc 843
||||||||||||||
Sbjct: 16253867 aaccgctacatcgc 16253854
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 16254318 caacgtcatcatccacaacatccacgtccacgac 16254285
Score = 46.1 bits (23), Expect = 0.047
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 455 cacttcggctggcgcaccgtctccgacggcgacggcatc 493
|||| ||| ||||||||| |||||||||||||||||||
Sbjct: 16254242 cactacgggtggcgcacccgctccgacggcgacggcatc 16254204
>gb|AACV01028829.1| Oryza sativa (japonica cultivar-group) Ctg028829, whole genome
shotgun sequence
Length = 1748
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatc 400
||||||||||||||||||||||||||||
Sbjct: 342 caacgtcatcatccacaacatccacatc 315
>gb|AC136224.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006B22,
complete sequence
Length = 166052
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatc 400
||||||||||||||||||||||||||||
Sbjct: 123978 caacgtcatcatccacaacatccacatc 123951
>gb|AC136227.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
OSJNBb0109A13, complete sequence
Length = 134258
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatc 400
||||||||||||||||||||||||||||
Sbjct: 14906 caacgtcatcatccacaacatccacatc 14879
>ref|NT_107206.1| Oryza sativa (japonica cultivar-group)
Length = 2441071
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatc 400
||||||||||||||||||||||||||||
Sbjct: 2321719 caacgtcatcatccacaacatccacatc 2321692
>gb|CH402036.1| Oryza sativa (japonica cultivar-group) scaffold002193 genomic
scaffold, whole genome shotgun sequence
Length = 5101
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatc 400
||||||||||||||||||||||||||||
Sbjct: 342 caacgtcatcatccacaacatccacatc 315
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
sequence
Length = 29737217
Score = 56.0 bits (28), Expect = 5e-005
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatc 400
||||||||||||||||||||||||||||
Sbjct: 14788564 caacgtcatcatccacaacatccacatc 14788537
>gb|AACV01010311.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010311, whole
genome shotgun sequence
Length = 74610
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 14997 caacgtcatcatccacaacatccacgtccacgac 14964
>gb|AACV01010416.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010416, whole
genome shotgun sequence
Length = 11465
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 6645 caacgtcatcatccacaacatccacgtccacgac 6612
>ref|NT_079865.2| Oryza sativa (japonica cultivar-group)
Length = 3674553
Score = 52.0 bits (26), Expect = 8e-004
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 373 caacgtcatcatccacaacatccacatcaacgac 406
||||||||||||||||||||||||| || |||||
Sbjct: 2245048 caacgtcatcatccacaacatccacgtccacgac 2245081
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,955,766
Number of Sequences: 438736
Number of extensions: 1955766
Number of successful extensions: 14548
Number of sequences better than 0.5: 78
Number of HSP's better than 0.5 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 13212
Number of HSP's gapped (non-prelim): 1253
length of query: 1273
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1252
effective length of database: 2,791,206,460
effective search space: 3494590487920
effective search space used: 3494590487920
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)