BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3173057.2.1
(1264 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB667976.1|CB667976 OSJNEd15J08.f OSJNEd Oryza sativa (j... 398 e-108
dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA... 398 e-108
dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA... 398 e-108
dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA... 398 e-108
ref|XM_474291.1| Oryza sativa (japonica cultivar-group), p... 398 e-108
dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) ... 375 e-101
gb|CB668015.1|CB668015 OSJNEd15K09.f OSJNEd Oryza sativa (j... 297 8e-078
gb|CB658352.1|CB658352 OSJNEc14F09.r OSJNEc Oryza sativa (j... 258 7e-066
gb|CB667977.1|CB667977 OSJNEd15J08.r OSJNEd Oryza sativa (j... 258 7e-066
gb|CB675128.1|CB675128 OSJNEe10K09.r OSJNEe Oryza sativa (j... 258 7e-066
gb|CB678061.1|CB678061 OSJNEe15J20.r OSJNEe Oryza sativa (j... 258 7e-066
gb|CF306821.1|CF306821 HDA1--04-P01.g1 OsHDAC1-overexpressi... 250 2e-063
gb|AU161343.1|AU161343 AU161343 Rice callus Oryza sativa (j... 244 1e-061
gb|CB637619.1|CB637619 OSJNEa04I21.r OSJNEa Oryza sativa (j... 242 4e-061
gb|AU068245.1|AU068245 AU068245 Rice callus Oryza sativa (j... 236 2e-059
gb|AU097384.1|AU097384 AU097384 Rice shoot Oryza sativa (ja... 236 2e-059
gb|AU093548.1|AU093548 AU093548 Rice callus Oryza sativa (j... 228 6e-057
gb|CB668016.1|CB668016 OSJNEd15K09.r OSJNEd Oryza sativa (j... 226 2e-056
gb|AU071215.1|AU071215 AU071215 Rice cDNA from young root O... 222 4e-055
gb|CB675127.1|CB675127 OSJNEe10K09.f OSJNEe Oryza sativa (j... 218 6e-054
gb|C72394.1|C72394 C72394 Rice panicle at flowering stage O... 212 3e-052
gb|AU182269.1|AU182269 AU182269 Rice panicle at flowering s... 196 2e-047
gb|D41751.1|D41751 RICS4540A Rice shoot Oryza sativa (japon... 190 1e-045
gb|AU181659.1|AU181659 AU181659 Rice callus (2001) Oryza sa... 190 1e-045
gb|CB678060.1|CB678060 OSJNEe15J20.f OSJNEe Oryza sativa (j... 182 3e-043
gb|CL521537.1|CL521537 MUL7H05 Flanking Sequence Tag of Ory... 180 1e-042
gb|AACV01010643.1| Oryza sativa (japonica cultivar-group) c... 180 1e-042
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 180 1e-042
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 180 1e-042
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 180 1e-042
emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromoso... 180 1e-042
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 180 1e-042
gb|AU181205.1|AU181205 AU181205 Rice callus (2001) Oryza sa... 165 7e-038
gb|AU065873.1|AU065873 AU065873 Rice green shoot Oryza sati... 161 1e-036
gb|CA999378.1|CA999378 S234G_H03 Rice cold stress germinati... 161 1e-036
gb|CB000002.1|CB000002 S345V_A12 Rice cold stress germinati... 161 1e-036
dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA... 159 4e-036
gb|AU071079.1|AU071079 AU071079 Rice cDNA from young root O... 141 1e-030
gb|AU070887.1|AU070887 AU070887 Rice cDNA from young root O... 137 2e-029
gb|AU162034.1|AU162034 AU162034 Rice cDNA from young root O... 121 1e-024
gb|AU076223.1|AU076223 AU076223 Rice cDNA from young root O... 113 2e-022
gb|AU095629.1|AU095629 AU095629 Rice cDNA from young root O... 105 6e-020
dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA... 100 4e-018
ref|XM_474296.1| Oryza sativa (japonica cultivar-group), p... 100 4e-018
gb|C96892.1|C96892 C96892 Rice callus Oryza sativa (japonic... 90 3e-015
gb|AACV01010644.1| Oryza sativa (japonica cultivar-group) c... 86 5e-014
gb|AU095627.1|AU095627 AU095627 Rice cDNA from young root O... 84 2e-013
gb|AU162033.1|AU162033 AU162033 Rice cDNA from young root O... 82 8e-013
gb|AU095625.1|AU095625 AU095625 Rice cDNA from young root O... 80 3e-012
gb|AU162036.1|AU162036 AU162036 Rice cDNA from young root O... 78 1e-011
gb|D23944.1|D23944 RICR0634A Rice root Oryza sativa (japoni... 72 8e-010
gb|AU092327.1|AU092327 AU092327 Rice callus Oryza sativa (j... 72 8e-010
gb|AU101626.1|AU101626 AU101626 Rice root Oryza sativa (jap... 72 8e-010
gb|AU165508.1|AU165508 AU165508 Rice panicle at flowering s... 72 8e-010
gb|CB000495.1|CB000495 S345Z_G10 Rice cold stress germinati... 72 8e-010
gb|CB646667.1|CB646667 OSJNEb09E07.r OSJNEb Oryza sativa (j... 72 8e-010
gb|CB677655.1|CB677655 OSJNEe14N14.r OSJNEe Oryza sativa (j... 72 8e-010
gb|CB682400.1|CB682400 OSJNEf09L02.r OSJNEf Oryza sativa (j... 72 8e-010
dbj|D90406.1|RICOZA Oryza sativa (japonica cultivar-group) ... 72 8e-010
dbj|AK061729.1| Oryza sativa (japonica cultivar-group) cDNA... 72 8e-010
dbj|AK071913.1| Oryza sativa (japonica cultivar-group) cDNA... 72 8e-010
dbj|AK098910.1| Oryza sativa (japonica cultivar-group) cDNA... 72 8e-010
gb|AACV01010587.1| Oryza sativa (japonica cultivar-group) c... 72 8e-010
ref|XM_474131.1| Oryza sativa (japonica cultivar-group), p... 72 8e-010
emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromoso... 72 8e-010
gb|AU065451.1|AU065451 AU065451 Rice root Oryza sativa (jap... 66 5e-008
gb|AU071008.1|AU071008 AU071008 Rice cDNA from young root O... 64 2e-007
gb|CA998752.1|CA998752 S345I_D09 Rice cold stress germinati... 64 2e-007
gb|AACV01008740.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
ref|XM_474851.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 58 1e-005
gb|CH401185.1| Oryza sativa (japonica cultivar-group) chrom... 58 1e-005
emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromoso... 58 1e-005
gb|AY781344.1| Oryza sativa (japonica cultivar-group) putat... 58 1e-005
gb|BP433017.1|BP433017 BP433017 Oryza sativa (japonica cult... 56 5e-005
gb|CB641552.1|CB641552 OSJNEb01E04.f OSJNEb Oryza sativa (j... 54 2e-004
gb|CB641633.1|CB641633 OSJNEb01G03.f OSJNEb Oryza sativa (j... 54 2e-004
gb|CB644000.1|CB644000 OSJNEb05A05.f OSJNEb Oryza sativa (j... 54 2e-004
gb|CB648467.1|CB648467 OSJNEb11N19.f OSJNEb Oryza sativa (j... 54 2e-004
gb|CB650805.1|CB650805 OSJNEb15H11.f OSJNEb Oryza sativa (j... 54 2e-004
dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
dbj|AP003928.3| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AACV01018980.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA 54 2e-004
ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-... 54 2e-004
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 54 2e-004
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|D16051.1|D16051 RICC2501A Rice callus Oryza sativa (japo... 52 8e-004
gb|C26524.1|C26524 C26524 Rice callus cDNA Oryza sativa (ja... 48 0.012
gb|CA755041.1|CA755041 BR030011000_PLATE_G04_31_034.ab1 OA ... 48 0.012
gb|CB646666.1|CB646666 OSJNEb09E07.f OSJNEb Oryza sativa (j... 48 0.012
gb|CB677654.1|CB677654 OSJNEe14N14.f OSJNEe Oryza sativa (j... 48 0.012
gb|CF324448.1|CF324448 HDN--06-J02.g1 OsHDAC1-overexpressin... 48 0.012
dbj|AK060534.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK104296.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
dbj|AK121500.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.012
ref|XM_467463.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.012
gb|C72666.1|C72666 C72666 Rice panicle at flowering stage O... 46 0.046
gb|CA756361.1|CA756361 BR030040000_PLATE_H07_56_063.ab1 OA ... 46 0.046
gb|CA998169.1|CA998169 S345A_B07 Rice cold stress germinati... 46 0.046
gb|CB647609.1|CB647609 OSJNEb10J18.f OSJNEb Oryza sativa (j... 46 0.046
gb|CB649731.1|CB649731 OSJNEb13N08.f OSJNEb Oryza sativa (j... 46 0.046
gb|CB652545.1|CB652545 OSJNEc02K12.f OSJNEc Oryza sativa (j... 46 0.046
gb|CB682399.1|CB682399 OSJNEf09L02.f OSJNEf Oryza sativa (j... 46 0.046
gb|C19560.1|C19560 C19560 Rice panicle at ripening stage Or... 44 0.18
gb|AU063847.1|AU063847 AU063847 Rice panicle at flowering s... 44 0.18
gb|CB641670.1|CB641670 OSJNEb01G23.f OSJNEb Oryza sativa (j... 44 0.18
gb|CB641721.1|CB641721 OSJNEb01I08.f OSJNEb Oryza sativa (j... 44 0.18
gb|CB641797.1|CB641797 OSJNEb01K03.f OSJNEb Oryza sativa (j... 44 0.18
gb|CB642904.1|CB642904 OSJNEb03F05.f OSJNEb Oryza sativa (j... 44 0.18
gb|CB643310.1|CB643310 OSJNEb03P01.f OSJNEb Oryza sativa (j... 44 0.18
gb|CB644239.1|CB644239 OSJNEb05F18.f OSJNEb Oryza sativa (j... 44 0.18
gb|CB644989.1|CB644989 OSJNEb06G24.f OSJNEb Oryza sativa (j... 44 0.18
gb|CB651776.1|CB651776 OSJNEb16O03.f OSJNEb Oryza sativa (j... 44 0.18
gb|CB654523.1|CB654523 OSJNEc07C03.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB655222.1|CB655222 OSJNEc08G18.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB655409.1|CB655409 OSJNEc08M24.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB656306.1|CB656306 OSJNEc10I06.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB657593.1|CB657593 OSJNEc13B07.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB657665.1|CB657665 OSJNEc13C24.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB658237.1|CB658237 OSJNEc14C05.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB658582.1|CB658582 OSJNEc14L11.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB659012.1|CB659012 OSJNEc15J06.f OSJNEc Oryza sativa (j... 44 0.18
gb|CB663179.1|CB663179 OSJNEd07N13.f OSJNEd Oryza sativa (j... 44 0.18
gb|CB670259.1|CB670259 OSJNEe03D24.f OSJNEe Oryza sativa (j... 44 0.18
gb|CB676488.1|CB676488 OSJNEe12M10.f OSJNEe Oryza sativa (j... 44 0.18
gb|CB677614.1|CB677614 OSJNEe14M07.f OSJNEe Oryza sativa (j... 44 0.18
gb|CB678619.1|CB678619 OSJNEe16P02.f OSJNEe Oryza sativa (j... 44 0.18
gb|CB682817.1|CB682817 OSJNEf10I05.f OSJNEf Oryza sativa (j... 44 0.18
dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK061947.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK071907.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK098908.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK099269.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
gb|AY335487.1| Oryza sativa (japonica cultivar-group) cyste... 44 0.18
dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
dbj|AK119670.1| Oryza sativa (japonica cultivar-group) cDNA... 44 0.18
gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OS... 44 0.18
ref|NT_107144.1| Oryza sativa (japonica cultivar-group) 44 0.18
gb|AC129716.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|AACV01003113.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01010747.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
gb|AACV01022633.1| Oryza sativa (japonica cultivar-group) c... 44 0.18
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 44 0.18
ref|NM_189456.1| Oryza sativa (japonica cultivar-group), p... 44 0.18
ref|XM_465566.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.18
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 44 0.18
ref|XM_506801.2| PREDICTED Oryza sativa (japonica cultivar-... 44 0.18
ref|XM_507482.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.18
ref|XM_507483.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.18
ref|XM_507484.1| PREDICTED Oryza sativa (japonica cultivar-... 44 0.18
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 44 0.18
dbj|AP003277.2| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|CH401258.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 44 0.18
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 44 0.18
gb|AC133005.4| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.18
>gb|CB667976.1|CB667976 OSJNEd15J08.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15J08 5', mRNA sequence
Length = 832
Score = 398 bits (201), Expect = e-108
Identities = 486/581 (83%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 602 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 543
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaaggttcgtggtgcagcttccgctg 766
|| | ||| || ||||| || || ||||||||||||||| | ||| || || ||||||
Sbjct: 542 tcagtgccataaccgacggcaaccacaccatggtcaaggcttgtgccacacctaccgctg 483
Query: 767 aagacacccgatttgtagagctggaactcccggccaccggcctcaatggcaacgctaact 826
||||| ||||| | |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 482 aagacgcccgaatgatagagctggaactcgcggccaccagcctcaatagcaacactgact 423
Query: 827 ggctggtgagcaaccgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaag 886
|| |||||||||||||||||||| || || ||||| || || | ||| ||||| ||||||
Sbjct: 422 ggttggtgagcaaccgccttctgaagtgatttctcatcattttgaggtacatcctcaaag 363
Query: 887 ccatcgatgctcacaaccctggcatttttcctgttcatgtcgcacttcccgtccacggct 946
|||||||||||||||||| | ||||||| |||||| ||||| ||||| || || || |||
Sbjct: 362 ccatcgatgctcacaaccttagcattttccctgttgatgtcacacttgccatctacagct 303
Query: 947 ctgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatcgaaagcg 1006
||||||| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||
Sbjct: 302 ttgtaaggatagtcatcttcagtatcaatgcctccattcttaatgatgaagtcaaaggca 243
Query: 1007 gcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcactctacgagc 1066
| ||||||||||| ||||||||||| |||||| ||| | || ||||| ||||| ||
Sbjct: 242 tcatccatgagcccaccgttgcagccactgttctgtccattggttgagcattctacaagt 183
Query: 1067 tcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgctttccactgag 1126
|| ||||| |||| ||| | ||||||||| || || | ||||| | |||||| |||| |
Sbjct: 182 tcttgttccgacaatgtgatcatctcaccagtaacaagttggttgatgctttctactgtg 123
Query: 1127 cttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgacg 1186
|||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct: 122 cttactgcggagaaggcccagcagcttccgcattggccctggttcttgacgggggcgacg 63
Query: 1187 gcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 62 gcgcccttctccctccagtcgacggactccggcagctcctc 22
Score = 89.7 bits (45), Expect = 3e-015
Identities = 69/77 (89%)
Strand = Plus / Minus
Query: 440 ttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttctcgtcg 499
||||||||||| || ||||||||||||||||||||||| | ||| |||||||| || |||
Sbjct: 824 ttcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttatcatcg 765
Query: 500 cagacattgtcaggggc 516
||||||| |||||||||
Sbjct: 764 cagacatggtcaggggc 748
>dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027D09, full
insert sequence
Length = 1753
Score = 398 bits (201), Expect = e-108
Identities = 486/581 (83%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 1100 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 1041
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaaggttcgtggtgcagcttccgctg 766
|| | ||| || ||||| || || ||||||||||||||| | ||| || || ||||||
Sbjct: 1040 tcagtgccataaccgacggcaaccacaccatggtcaaggcttgtgccacacctaccgctg 981
Query: 767 aagacacccgatttgtagagctggaactcccggccaccggcctcaatggcaacgctaact 826
||||| ||||| | |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 980 aagacgcccgaatgatagagctggaactcgcggccaccagcctcaatagcaacactgact 921
Query: 827 ggctggtgagcaaccgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaag 886
|| |||||||||||||||||||| || || ||||| || || | ||| ||||| ||||||
Sbjct: 920 ggttggtgagcaaccgccttctgaagtgatttctcatcattttgaggtacatcctcaaag 861
Query: 887 ccatcgatgctcacaaccctggcatttttcctgttcatgtcgcacttcccgtccacggct 946
|||||||||||||||||| | ||||||| |||||| ||||| ||||| || || || |||
Sbjct: 860 ccatcgatgctcacaaccttagcattttccctgttgatgtcacacttgccatctacagct 801
Query: 947 ctgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatcgaaagcg 1006
||||||| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||
Sbjct: 800 ttgtaaggatagtcatcttcagtatcaatgcctccattcttaatgatgaagtcaaaggca 741
Query: 1007 gcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcactctacgagc 1066
| ||||||||||| ||||||||||| |||||| ||| | || ||||| ||||| ||
Sbjct: 740 tcatccatgagcccaccgttgcagccactgttctgtccattggttgagcattctacaagt 681
Query: 1067 tcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgctttccactgag 1126
|| ||||| |||| ||| | ||||||||| || || | ||||| | |||||| |||| |
Sbjct: 680 tcttgttccgacaatgtgatcatctcaccagtaacaagttggttgatgctttctactgtg 621
Query: 1127 cttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgacg 1186
|||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct: 620 cttactgcggagaaggcccagcagcttccgcattggccctggttcttgacgggggcgacg 561
Query: 1187 gcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 560 gcgcccttctccctccagtcgacggactccggcagctcctc 520
Score = 250 bits (126), Expect = 2e-063
Identities = 228/262 (87%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| |||| || ||||||||
Sbjct: 1507 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgcacaatgggctgt 1448
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 1447 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 1388
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 1387 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 1328
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 1327 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 1268
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 1267 catcgcagacatggtcaggggc 1246
>dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044I21, full
insert sequence
Length = 1742
Score = 398 bits (201), Expect = e-108
Identities = 486/581 (83%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 1075 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 1016
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaaggttcgtggtgcagcttccgctg 766
|| | ||| || ||||| || || ||||||||||||||| | ||| || || ||||||
Sbjct: 1015 tcagtgccataaccgacggcaaccacaccatggtcaaggcttgtgccacacctaccgctg 956
Query: 767 aagacacccgatttgtagagctggaactcccggccaccggcctcaatggcaacgctaact 826
||||| ||||| | |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 955 aagacgcccgaatgatagagctggaactcgcggccaccagcctcaatagcaacactgact 896
Query: 827 ggctggtgagcaaccgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaag 886
|| |||||||||||||||||||| || || ||||| || || | ||| ||||| ||||||
Sbjct: 895 ggttggtgagcaaccgccttctgaagtgatttctcatcattttgaggtacatcctcaaag 836
Query: 887 ccatcgatgctcacaaccctggcatttttcctgttcatgtcgcacttcccgtccacggct 946
|||||||||||||||||| | ||||||| |||||| ||||| ||||| || || || |||
Sbjct: 835 ccatcgatgctcacaaccttagcattttccctgttgatgtcacacttgccatctacagct 776
Query: 947 ctgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatcgaaagcg 1006
||||||| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||
Sbjct: 775 ttgtaaggatagtcatcttcagtatcaatgcctccattcttaatgatgaagtcaaaggca 716
Query: 1007 gcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcactctacgagc 1066
| ||||||||||| ||||||||||| |||||| ||| | || ||||| ||||| ||
Sbjct: 715 tcatccatgagcccaccgttgcagccactgttctgtccattggttgagcattctacaagt 656
Query: 1067 tcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgctttccactgag 1126
|| ||||| |||| ||| | ||||||||| || || | ||||| | |||||| |||| |
Sbjct: 655 tcttgttccgacaatgtgatcatctcaccagtaacaagttggttgatgctttctactgtg 596
Query: 1127 cttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgacg 1186
|||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct: 595 cttactgcggagaaggcccagcagcttccgcattggccctggttcttgacgggggcgacg 536
Query: 1187 gcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 535 gcgcccttctccctccagtcgacggactccggcagctcctc 495
Score = 250 bits (126), Expect = 2e-063
Identities = 228/262 (87%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 1482 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 1423
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 1422 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 1363
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||| | |||||||
Sbjct: 1362 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagcccgaaaccaagc 1303
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 1302 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 1243
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 1242 catcgcagacatggtcaggggc 1221
>dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-E09, full
insert sequence
Length = 1766
Score = 398 bits (201), Expect = e-108
Identities = 486/581 (83%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 1099 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 1040
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaaggttcgtggtgcagcttccgctg 766
|| | ||| || ||||| || || ||||||||||||||| | ||| || || ||||||
Sbjct: 1039 tcagtgccataaccgacggcaaccacaccatggtcaaggcttgtgccacacctaccgctg 980
Query: 767 aagacacccgatttgtagagctggaactcccggccaccggcctcaatggcaacgctaact 826
||||| ||||| | |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 979 aagacgcccgaatgatagagctggaactcgcggccaccagcctcaatagcaacactgact 920
Query: 827 ggctggtgagcaaccgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaag 886
|| |||||||||||||||||||| || || ||||| || || | ||| ||||| ||||||
Sbjct: 919 ggttggtgagcaaccgccttctgaagtgatttctcatcattttgaggtacatcctcaaag 860
Query: 887 ccatcgatgctcacaaccctggcatttttcctgttcatgtcgcacttcccgtccacggct 946
|||||||||||||||||| | ||||||| |||||| ||||| ||||| || || || |||
Sbjct: 859 ccatcgatgctcacaaccttagcattttccctgttgatgtcacacttgccatctacagct 800
Query: 947 ctgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatcgaaagcg 1006
||||||| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||
Sbjct: 799 ttgtaaggatagtcatcttcagtatcaatgcctccattcttaatgatgaagtcaaaggca 740
Query: 1007 gcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcactctacgagc 1066
| ||||||||||| ||||||||||| |||||| ||| | || ||||| ||||| ||
Sbjct: 739 tcatccatgagcccaccgttgcagccactgttctgtccattggttgagcattctacaagt 680
Query: 1067 tcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgctttccactgag 1126
|| ||||| |||| ||| | ||||||||| || || | ||||| | |||||| |||| |
Sbjct: 679 tcttgttccgacaatgtgatcatctcaccagtaacaagttggttgatgctttctactgtg 620
Query: 1127 cttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgacg 1186
|||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct: 619 cttactgcggagaaggcccagcagcttccgcattggccctggttcttgacgggggcgacg 560
Query: 1187 gcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 559 gcgcccttctccctccagtcgacggactccggcagctcctc 519
Score = 258 bits (130), Expect = 7e-066
Identities = 229/262 (87%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 1506 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 1447
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 1446 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 1387
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 1386 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 1327
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 1326 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 1267
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 1266 catcgcagacatggtcaggggc 1245
>ref|XM_474291.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1401
Score = 398 bits (201), Expect = e-108
Identities = 486/581 (83%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 995 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 936
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaaggttcgtggtgcagcttccgctg 766
|| | ||| || ||||| || || ||||||||||||||| | ||| || || ||||||
Sbjct: 935 tcagtgccataaccgacggcaaccacaccatggtcaaggcttgtgccacacctaccgctg 876
Query: 767 aagacacccgatttgtagagctggaactcccggccaccggcctcaatggcaacgctaact 826
||||| ||||| | |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 875 aagacgcccgaatgatagagctggaactcgcggccaccagcctcaatagcaacactgact 816
Query: 827 ggctggtgagcaaccgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaag 886
|| |||||||||||||||||||| || || ||||| || || | ||| ||||| ||||||
Sbjct: 815 ggttggtgagcaaccgccttctgaagtgatttctcatcattttgaggtacatcctcaaag 756
Query: 887 ccatcgatgctcacaaccctggcatttttcctgttcatgtcgcacttcccgtccacggct 946
|||||||||||||||||| | ||||||| |||||| ||||| ||||| || || || |||
Sbjct: 755 ccatcgatgctcacaaccttagcattttccctgttgatgtcacacttgccatctacagct 696
Query: 947 ctgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatcgaaagcg 1006
||||||| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||
Sbjct: 695 ttgtaaggatagtcatcttcagtatcaatgcctccattcttaatgatgaagtcaaaggca 636
Query: 1007 gcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcactctacgagc 1066
| ||||||||||| ||||||||||| |||||| ||| | || ||||| ||||| ||
Sbjct: 635 tcatccatgagcccaccgttgcagccactgttctgtccattggttgagcattctacaagt 576
Query: 1067 tcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgctttccactgag 1126
|| ||||| |||| ||| | ||||||||| || || | ||||| | |||||| |||| |
Sbjct: 575 tcttgttccgacaatgtgatcatctcaccagtaacaagttggttgatgctttctactgtg 516
Query: 1127 cttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgacg 1186
|||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct: 515 cttactgcggagaaggcccagcagcttccgcattggccctggttcttgacgggggcgacg 456
Query: 1187 gcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 455 gcgcccttctccctccagtcgacggactccggcagctcctc 415
Score = 256 bits (129), Expect = 3e-065
Identities = 228/261 (87%)
Strand = Plus / Minus
Query: 256 tcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgtt 315
|||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| |||||||||
Sbjct: 1401 tcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgtt 1342
Query: 316 cttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagca 375
||||||| | ||||| |||||||| | | |||||||||||||||| | |||||||||||
Sbjct: 1341 cttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagca 1282
Query: 376 gctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagca 435
|||||| ||||||||||||||||| || || || || ||||| |||||||| ||||||||
Sbjct: 1281 gctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagca 1222
Query: 436 gacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttctc 495
|| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| ||
Sbjct: 1221 gagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttatc 1162
Query: 496 gtcgcagacattgtcaggggc 516
|||||||||| |||||||||
Sbjct: 1161 atcgcagacatggtcaggggc 1141
>dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) mRNA for oryzain beta,
complete cds
Length = 1675
Score = 375 bits (189), Expect = e-101
Identities = 483/581 (83%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 1011 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 952
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaaggttcgtggtgcagcttccgctg 766
|| | ||| || ||||| || || ||||||||||||||| | ||| || || ||||||
Sbjct: 951 tcagtgccataaccgacggcaaccacaccatggtcaaggcttgtgccacacctaccgctg 892
Query: 767 aagacacccgatttgtagagctggaactcccggccaccggcctcaatggcaacgctaact 826
|| || ||||| | |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 891 aatacgcccgaatgatagagctggaactcgcggccaccagcctcaatagcaacactgact 832
Query: 827 ggctggtgagcaaccgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaag 886
|| ||||||||||| |||||||| || || ||||| || || | ||| ||||| ||||||
Sbjct: 831 ggttggtgagcaacggccttctgaagtgatttctcatcattttgaggtacatcctcaaag 772
Query: 887 ccatcgatgctcacaaccctggcatttttcctgttcatgtcgcacttcccgtccacggct 946
|||||||||||||||||| | ||||||| |||||| ||||| ||||| || || || |||
Sbjct: 771 ccatcgatgctcacaaccttagcattttccctgttgatgtcacacttgccatctacagct 712
Query: 947 ctgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatcgaaagcg 1006
||||||| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||
Sbjct: 711 ttgtaaggatagtcatcttcagtatcaatgcctccattcttaatgatgaagtcaaaggca 652
Query: 1007 gcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcactctacgagc 1066
| |||||||||| ||||||||||| |||||| ||| | || ||||| ||||| ||
Sbjct: 651 tcagccatgagcccaccgttgcagccactgttctgtccattggttgagcattctacaagt 592
Query: 1067 tcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgctttccactgag 1126
|| ||||| |||| ||| | ||||||||| || || | ||||| | |||||| |||| |
Sbjct: 591 tcttgttccgacaatgtgatcatctcaccagtaacaagttggttgatgctttctactgtg 532
Query: 1127 cttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgacg 1186
|||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct: 531 cttactgcggagaaggcccagcagcttccgcattggccctggttcttgacgggggcgacg 472
Query: 1187 gcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 471 gcgcccttctccctccagtcgacggactccggcagctcctc 431
Score = 242 bits (122), Expect = 4e-061
Identities = 218/250 (87%)
Strand = Plus / Minus
Query: 267 tcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgttcttgctcaccg 326
||||||| ||||| ||||||||||| ||||| ||||||| |||||||||||||||| | |
Sbjct: 1406 tcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgttcttgctcgctg 1347
Query: 327 agcaagttccagctctgacgttgcagacagggtagcccggcgggcagcagctggcgtgat 386
|||| |||||||| | | |||||||||||||||| | ||||||||||||||||| ||||
Sbjct: 1346 agcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagcagctggcatgat 1287
Query: 387 ccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagcagacgttcctga 446
||||||||||||| || || || || ||||| |||||||| |||||||||| |||||||
Sbjct: 1286 ccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagcagagattcctga 1227
Query: 447 agccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttctcgtcgcagacat 506
|||| || ||||||||||||||||||||||| | ||| |||||||| || ||||||||||
Sbjct: 1226 agccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttatcatcgcagacat 1167
Query: 507 tgtcaggggc 516
|||||||||
Sbjct: 1166 ggtcaggggc 1157
>gb|CB668015.1|CB668015 OSJNEd15K09.f OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15K09 5', mRNA sequence
Length = 835
Score = 297 bits (150), Expect = 8e-078
Identities = 475/582 (81%), Gaps = 1/582 (0%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 603 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 544
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaaggttcgtggtgcagcttccgctg 766
|| | ||| || ||||| || || ||||||||||||||| | ||| || || ||||||
Sbjct: 543 tcagtgccataaccgacggcaaccacaccatggtcaaggcttgtgccacacctaccgctg 484
Query: 767 aagacacccgatttgtagagctggaactcccggccaccggcctcaatggcaacgctaact 826
||||| ||||| | |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 483 aagacgcccgaatgatagagctggaactcgcggccaccagcctcaatagcaacactgact 424
Query: 827 ggctggtgagcaaccgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaag 886
|| |||||||||||||||||||| || || || || || || | ||| ||||| ||||||
Sbjct: 423 ggttggtgagcaaccgccttctgaagtgatttgtcatcattttgaggtacatcctcaaag 364
Query: 887 ccatcgatgctcacaaccctggcatttttcctgttcatgtcgcacttcccgtccacggct 946
|||||||||||||||||| | ||||||| || ||| ||||| ||||| || || || | |
Sbjct: 363 ccatcgatgctcacaaccttagcattttccccgttgatgtcacacttgccatctacagtt 304
Query: 947 ctgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatcgaaagcg 1006
||||||| ||||||||||| ||||| ||||| || ||||| |||| ||| || || ||
Sbjct: 303 ttgtaaggatagtcatcttcagtatcaatgcctccattcttaatgaggaagtcaaaggca 244
Query: 1007 gcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcactctacgagc 1066
| ||||||||||| ||||||||||| |||| ||| | || ||||| ||| | ||
Sbjct: 243 tcatccatgagcccaccgttgcagccagtgttgagtccattggttgagcattctccaagt 184
Query: 1067 tcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgctttccactgag 1126
|| ||||| |||| ||| | ||||||||| || || | ||| | | ||||| |||| |
Sbjct: 183 tcttgttccgacaatgtgatcatctcaccagtaacaagttgggtgatgctttatactgtg 124
Query: 1127 cttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgacg 1186
||||| || ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||||
Sbjct: 123 cttaccgcggagaaggcccagcagcttccgcattggccctggttcttcacgggggcgacg 64
Query: 1187 -gcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||||||||||||||||||| |||||||||||||||
Sbjct: 63 agcgcccttctccctccagtcgacggactccggcagctcctc 22
Score = 93.7 bits (47), Expect = 2e-016
Identities = 77/87 (88%)
Strand = Plus / Minus
Query: 430 caagcagacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaa 489
|||||||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||
Sbjct: 835 caagcagagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaa 776
Query: 490 gttctcgtcgcagacattgtcaggggc 516
||| || |||||||||| |||||||||
Sbjct: 775 gttatcatcgcagacatggtcaggggc 749
>gb|CB658352.1|CB658352 OSJNEc14F09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc14F09 3', mRNA sequence
Length = 552
Score = 258 bits (130), Expect = 7e-066
Identities = 229/262 (87%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 261 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 320
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 321 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 380
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 381 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 440
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 441 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 500
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 501 catcgcagacatggtcaggggc 522
>gb|CB667977.1|CB667977 OSJNEd15J08.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15J08 3', mRNA sequence
Length = 602
Score = 258 bits (130), Expect = 7e-066
Identities = 229/262 (87%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 305 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 364
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 365 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 424
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 425 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 484
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 485 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 544
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 545 catcgcagacatggtcaggggc 566
>gb|CB675128.1|CB675128 OSJNEe10K09.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10K09 3', mRNA sequence
Length = 792
Score = 258 bits (130), Expect = 7e-066
Identities = 229/262 (87%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 267 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 326
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 327 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 386
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 387 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 446
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 447 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 506
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 507 catcgcagacatggtcaggggc 528
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 674 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 733
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaagg 745
|| | ||| || ||||| || || |||||||||||||||
Sbjct: 734 tcagtgccataaccgacggcaaccacaccatggtcaagg 772
>gb|CB678061.1|CB678061 OSJNEe15J20.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15J20 3', mRNA sequence
Length = 793
Score = 258 bits (130), Expect = 7e-066
Identities = 229/262 (87%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 268 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 327
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 328 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 387
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 388 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 447
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 448 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 507
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 508 catcgcagacatggtcaggggc 529
Score = 67.9 bits (34), Expect = 1e-008
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtc 696
|||| ||| ||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 675 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtc 724
>gb|CF306821.1|CF306821 HDA1--04-P01.g1 OsHDAC1-overexpressing transgenic rice lambda phage
cDNA library I (HDA1) Oryza sativa (japonica
cultivar-group) cDNA clone HDA1--04-P01, mRNA sequence
Length = 456
Score = 250 bits (126), Expect = 2e-063
Identities = 288/342 (84%)
Strand = Plus / Minus
Query: 886 gccatcgatgctcacaaccctggcatttttcctgttcatgtcgcacttcccgtccacggc 945
||||||||||||||||||| | ||||||| |||||| ||||| ||||| || || || ||
Sbjct: 456 gccatcgatgctcacaaccttagcattttccctgttgatgtcacacttgccatctacagc 397
Query: 946 tctgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatcgaaagc 1005
| ||||||| ||||||||||| ||||| ||||| || ||||| |||||||| || || ||
Sbjct: 396 tttgtaaggatagtcatcttcagtatcaatgcctccattcttaatgatgaagtcaaaggc 337
Query: 1006 ggcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcactctacgag 1065
| ||||||||||| ||||||||||| |||||| ||| | || ||||| ||||| ||
Sbjct: 336 atcatccatgagcccaccgttgcagccactgttctgtccattggttgagcattctacaag 277
Query: 1066 ctcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgctttccactga 1125
|| ||||| |||| ||| | ||||||||| || || | ||||| | |||||| ||||
Sbjct: 276 ttcttgttccgacaatgtgatcatctcaccagtaacaagttggttgatgctttctactgt 217
Query: 1126 gcttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgac 1185
||||||||| ||||| |||||||| ||||||||||| ||||||||||||||||| |||||
Sbjct: 216 gcttactgcggagaaggcccagcagcttccgcattggccctggttcttgacgggggcgac 157
Query: 1186 ggcgcccttctccctccagtcgacgctctccggcagctcctc 1227
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 156 ggcgcccttctccctccagtcgacggactccggcagctcctc 115
>gb|AU161343.1|AU161343 AU161343 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C61808, mRNA sequence
Length = 595
Score = 244 bits (123), Expect = 1e-061
Identities = 229/263 (87%), Gaps = 1/263 (0%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggc-gagggtgcgcttcaaggccttgacgctcagtgggctg 313
||||||||||| ||||||| || ||| ||||||||||| ||||| ||||||| |||||||
Sbjct: 320 ctcatgcggtgttcagcttagccgagcgtgcgcttcaaagccttcacgctcaatgggctg 261
Query: 314 ttcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcag 373
||||||||| | ||||| |||||||| | | |||||||||||||||| | |||||||||
Sbjct: 260 ttcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcag 201
Query: 374 cagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaag 433
|||||||| ||||||||||||||||| || || || || ||||| |||||||| ||||||
Sbjct: 200 cagctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaag 141
Query: 434 cagacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttc 493
|||| ||||||||||| || ||||||||||||||||||||||| | ||| ||||||||
Sbjct: 140 cagagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagtta 81
Query: 494 tcgtcgcagacattgtcaggggc 516
|| |||||||||| |||||||||
Sbjct: 80 tcatcgcagacatggtcaggggc 58
>gb|CB637619.1|CB637619 OSJNEa04I21.r OSJNEa Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEa04I21 3', mRNA sequence
Length = 538
Score = 242 bits (122), Expect = 4e-061
Identities = 227/262 (86%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||| ||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 269 ctcatgcggtgttcaacttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 328
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | |||||||||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 329 tcttgctcgctgagcaagttccagcccgggtgttgcagacagggtagtcaggcgggcagc 388
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| |||||||||||||| || || || || || ||||| |||||||| |||||||
Sbjct: 389 agctggcatgatccttgcagcaagttgcaccttcaactgggcaacagccccaaaccaagc 448
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 449 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 508
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||| ||||
Sbjct: 509 catcgcagacatggtcaagggc 530
>gb|AU068245.1|AU068245 AU068245 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C12638_10Z, mRNA sequence
Length = 633
Score = 236 bits (119), Expect = 2e-059
Identities = 227/262 (86%), Gaps = 1/262 (0%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 357 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 298
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 297 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 238
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 237 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 178
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||| |||||||||||||||| | ||| |||||||| |
Sbjct: 177 agagattcctgaagccgaatgcgca-nagcaggtgctgcccgctgggcaagagaagttat 119
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 118 catcgcagacatggtcaggggc 97
>gb|AU097384.1|AU097384 AU097384 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S4540, mRNA sequence
Length = 684
Score = 236 bits (119), Expect = 2e-059
Identities = 227/262 (86%), Gaps = 1/262 (0%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 430 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 371
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | |||||||||
Sbjct: 370 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcangcgggcagc 311
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 310 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 251
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||| ||||||||||||||||| | ||| |||||||| |
Sbjct: 250 agagattcctgaagccgaatgcgca-cagcaggtgctgcccgctgggcaagagaagttat 192
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 191 catcgcagacatggtcaggggc 170
>gb|AU093548.1|AU093548 AU093548 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C51459, mRNA sequence
Length = 718
Score = 228 bits (115), Expect = 6e-057
Identities = 225/262 (85%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 443 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 384
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 383 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 324
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 323 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 264
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||| |||||||||||||| | ||| |||||||| |
Sbjct: 263 agagattcctgaagccgaatgcgcanagccaggtgctgcccgctgggcaagagaagttat 204
Query: 495 cgtcgcagacattgtcaggggc 516
| |||||||||| |||||||||
Sbjct: 203 catcgcagacatggtcaggggc 182
>gb|CB668016.1|CB668016 OSJNEd15K09.r OSJNEd Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEd15K09 3', mRNA sequence
Length = 607
Score = 226 bits (114), Expect = 2e-056
Identities = 225/262 (85%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 305 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 364
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | || || |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 365 tcttgctcgctgaacaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 424
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||| |||| || || || || ||||| |||||||| |||||||
Sbjct: 425 agctggcatgatccttgcaacagggtgcaccttcaactgggcaacagccccaaaccaagc 484
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttct 494
||| ||||||||||| || ||||||||||||||||||||||| | ||| |||||||| |
Sbjct: 485 agagattcctgaagccgaatgcgcagcagcaggtgctgcccgctgggcaagagaagttat 544
Query: 495 cgtcgcagacattgtcaggggc 516
| ||||| |||| |||||||||
Sbjct: 545 catcgcaaacatggtcaggggc 566
>gb|AU071215.1|AU071215 AU071215 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10917_2Z, mRNA sequence
Length = 666
Score = 222 bits (112), Expect = 4e-055
Identities = 223/260 (85%), Gaps = 1/260 (0%)
Strand = Plus / Minus
Query: 257 catgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgttc 316
||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||||
Sbjct: 359 catgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgttc 300
Query: 317 ttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagcag 376
|||||| | ||||| |||||||| | | |||||||| ||||||| | ||||||||||||
Sbjct: 299 ttgctcgctgagcaggttccagcccgggngttgcaganagggtagtcaggcgggcagcag 240
Query: 377 ctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagcag 436
||||| ||||||||||||||||| || || || || ||||| ||||||| |||||||||
Sbjct: 239 ctggcatgatccttgcagcaggttgcaccttcaactgggcaanagccccaaaccaagcag 180
Query: 437 acgttcctgaagccaaacgcgcagcagcaggtgctgcccgcggagcacgagaagttctcg 496
| ||||||||||| || ||||| |||||||||||||||| | ||| |||||||| ||
Sbjct: 179 agattcctgaagccgaatgcgca-nagcaggtgctgcccgctgggcaagagaagttatca 121
Query: 497 tcgcagacattgtcaggggc 516
|||||||||| |||||||||
Sbjct: 120 tcgcagacatggtcaggggc 101
>gb|CB675127.1|CB675127 OSJNEe10K09.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe10K09 5', mRNA sequence
Length = 819
Score = 218 bits (110), Expect = 6e-054
Identities = 266/318 (83%)
Strand = Plus / Minus
Query: 910 atttttcctgttcatgtcgcacttcccgtccacggctctgtaagggtagtcatcttcggt 969
||||| |||||| ||||| ||||| || || || ||| ||||||| ||||||||||| ||
Sbjct: 819 attttccctgttgatgtcacacttgccatctacagctttgtaaggatagtcatcttcagt 760
Query: 970 atcgatgcccccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgca 1029
||| ||||| || ||||| |||||||| || || || | ||||||||||| ||||||||
Sbjct: 759 atcaatgcctccattcttaatgatgaagtcaaaggcatcatccatgagcccaccgttgca 700
Query: 1030 gccgctgttccctccgtcagtcgagcactctacgagctcctgttcagacagtgtcaccat 1089
||| |||||| ||| | || ||||| ||||| || || ||||| |||| ||| | |||
Sbjct: 699 gccactgttctgtccattggttgagcattctacaagttcttgttccgacaatgtgatcat 640
Query: 1090 ctcaccggtgacgatctggttaacgctttccactgagcttactgcagagaaagcccagca 1149
|||||| || || | ||||| | |||||| |||| ||||||||| ||||| ||||||||
Sbjct: 639 ctcaccagtaacaagttggttgatgctttctactgtgcttactgcggagaaggcccagca 580
Query: 1150 acttccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcgac 1209
||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 579 gcttccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcgac 520
Query: 1210 gctctccggcagctcctc 1227
| |||||||||||||||
Sbjct: 519 ggactccggcagctcctc 502
>gb|C72394.1|C72394 C72394 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1544_1A, mRNA sequence
Length = 365
Score = 212 bits (107), Expect = 3e-052
Identities = 191/219 (87%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 219 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 160
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 159 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 100
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 99 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 40
Query: 435 agacgttcctgaagccaaacgcgcagcagcaggtgctgc 473
||| ||||||||||| || ||||| |||||||||||||
Sbjct: 39 agagattcctgaagccgaatgcgcatcagcaggtgctgc 1
>gb|AU182269.1|AU182269 AU182269 Rice panicle at flowering stage Oryza sativa (japonica
cultivar-group) cDNA clone E1544, mRNA sequence
Length = 462
Score = 196 bits (99), Expect = 2e-047
Identities = 180/207 (86%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 207 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 148
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 147 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 88
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 87 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 28
Query: 435 agacgttcctgaagccaaacgcgcagc 461
||| ||||||||||| || |||||||
Sbjct: 27 agagattcctgaagccgaatgcgcagc 1
>gb|D41751.1|D41751 RICS4540A Rice shoot Oryza sativa (japonica cultivar-group) cDNA,
mRNA sequence
Length = 382
Score = 190 bits (96), Expect = 1e-045
Identities = 230/275 (83%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| |||||||||| || || ||
Sbjct: 276 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtntttgccattg 217
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaaggttcgtggtgcagcttccgctg 766
|| | ||| || ||||| || || ||||||||||||||| | ||| || || ||||||
Sbjct: 216 tcagtgccataaccgacggcaaccacaccatggtcaaggcttgtgccacacctaccgctg 157
Query: 767 aagacacccgatttgtagagctggaactcccggccaccggcctcaatggcaacgctaact 826
||||| ||||| | |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 156 aagacgcccgaatgatagagctggaactcgcggccaccagcctcaatagcaacactgact 97
Query: 827 ggctggtgagcaaccgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaag 886
|| |||||||||||||||||||| || || ||||| || || | ||| ||||| ||||||
Sbjct: 96 ggttggtgagcaaccgccttctgaagtgatttctcatcattttgaggtacatcctcaaag 37
Query: 887 ccatcgatgctcacaaccctggcatttttcctgtt 921
|||||||||||||||||| | ||||||| ||||||
Sbjct: 36 ccatcgatgctcacaaccttagcattttccctgtt 2
>gb|AU181659.1|AU181659 AU181659 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C51120, mRNA sequence
Length = 454
Score = 190 bits (96), Expect = 1e-045
Identities = 171/196 (87%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 199 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 140
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 139 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 80
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccagaccaagc 434
||||||| ||||||||||||||||| || || || || ||||| |||||||| |||||||
Sbjct: 79 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagccccaaaccaagc 20
Query: 435 agacgttcctgaagcc 450
||| |||||||||||
Sbjct: 19 agagattcctgaagcc 4
>gb|CB678060.1|CB678060 OSJNEe15J20.f OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15J20 5', mRNA sequence
Length = 755
Score = 182 bits (92), Expect = 3e-043
Identities = 218/260 (83%)
Strand = Plus / Minus
Query: 968 gtatcgatgcccccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttg 1027
||||| ||||| || ||||| |||||||| || || || | ||||||||||| ||||||
Sbjct: 754 gtatcaatgcctccattcttaatgatgaagtcaaaggcatcatccatgagcccaccgttg 695
Query: 1028 cagccgctgttccctccgtcagtcgagcactctacgagctcctgttcagacagtgtcacc 1087
||||| |||||| ||| | || ||||| ||||| || || ||||| |||| ||| | |
Sbjct: 694 cagccactgttctgtccattggttgagcattctacaagttcttgttccgacaatgtgatc 635
Query: 1088 atctcaccggtgacgatctggttaacgctttccactgagcttactgcagagaaagcccag 1147
|||||||| || || | ||||| | |||||| |||| ||||||||| ||||| ||||||
Sbjct: 634 atctcaccagtaacaagttggttgatgctttctactgtgcttactgcggagaaggcccag 575
Query: 1148 caacttccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcg 1207
|| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 574 cagcttccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcg 515
Query: 1208 acgctctccggcagctcctc 1227
||| |||||||||||||||
Sbjct: 514 acggactccggcagctcctc 495
>gb|CL521537.1|CL521537 MUL7H05 Flanking Sequence Tag of Oryza sativa T-DNA insertion lines
Oryza sativa (japonica cultivar-group) genomic, DNA
sequence
Length = 653
Score = 180 bits (91), Expect = 1e-042
Identities = 151/171 (88%)
Strand = Plus / Minus
Query: 346 gttgcagacagggtagcccggcgggcagcagctggcgtgatccttgcagcaggtggcgcc 405
|||||||||||||||| | ||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 465 gttgcagacagggtagtcaggcgggcagcagctggcatgatccttgcagcaggttgcacc 406
Query: 406 ctcgaccgggcagcagccccagaccaagcagacgttcctgaagccaaacgcgcagcagca 465
|| || ||||| |||||||| |||||||||| ||||||||||| || |||||||||||
Sbjct: 405 ttcaactgggcaacagccccaaaccaagcagagattcctgaagccgaatgcgcagcagca 346
Query: 466 ggtgctgcccgcggagcacgagaagttctcgtcgcagacattgtcaggggc 516
|||||||||||| | ||| |||||||| || |||||||||| |||||||||
Sbjct: 345 ggtgctgcccgctgggcaagagaagttatcatcgcagacatggtcaggggc 295
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 149 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 90
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaagg 745
|| | ||| || ||||| || || |||||||||||||||
Sbjct: 89 tcagtgccataaccgacggcaaccacaccatggtcaagg 51
>gb|AACV01010643.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010643, whole
genome shotgun sequence
Length = 23710
Score = 180 bits (91), Expect = 1e-042
Identities = 151/171 (88%)
Strand = Plus / Minus
Query: 346 gttgcagacagggtagcccggcgggcagcagctggcgtgatccttgcagcaggtggcgcc 405
|||||||||||||||| | ||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 8272 gttgcagacagggtagtcaggcgggcagcagctggcatgatccttgcagcaggttgcacc 8213
Query: 406 ctcgaccgggcagcagccccagaccaagcagacgttcctgaagccaaacgcgcagcagca 465
|| || ||||| |||||||| |||||||||| ||||||||||| || |||||||||||
Sbjct: 8212 ttcaactgggcaacagccccaaaccaagcagagattcctgaagccgaatgcgcagcagca 8153
Query: 466 ggtgctgcccgcggagcacgagaagttctcgtcgcagacattgtcaggggc 516
|||||||||||| | ||| |||||||| || |||||||||| |||||||||
Sbjct: 8152 ggtgctgcccgctgggcaagagaagttatcatcgcagacatggtcaggggc 8102
Score = 129 bits (65), Expect = 4e-027
Identities = 116/133 (87%)
Strand = Plus / Minus
Query: 782 tagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaacc 841
|||||||||||||| |||||||| |||||||| ||||| || ||||| ||||||||||||
Sbjct: 7745 tagagctggaactcgcggccaccagcctcaatagcaacactgactggttggtgagcaacc 7686
Query: 842 gccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatgctcaca 901
|||||||| || || ||||| || || | ||| ||||| |||||||||||||||||||||
Sbjct: 7685 gccttctgaagtgatttctcatcattttgaggtacatcctcaaagccatcgatgctcaca 7626
Query: 902 accctggcatttt 914
||| | |||||||
Sbjct: 7625 accttagcatttt 7613
Score = 115 bits (58), Expect = 6e-023
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 1154 ccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcgacgctc 1213
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 6148 ccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcgacggac 6089
Query: 1214 tccggcagctcctc 1227
||||||||||||||
Sbjct: 6088 tccggcagctcctc 6075
Score = 103 bits (52), Expect = 2e-019
Identities = 193/240 (80%)
Strand = Plus / Minus
Query: 916 cctgttcatgtcgcacttcccgtccacggctctgtaagggtagtcatcttcggtatcgat 975
|||||| ||||| ||||| || || || ||| ||||||| ||||||||||| ||||| ||
Sbjct: 7515 cctgttgatgtcacacttgccatctacagctttgtaaggatagtcatcttcagtatcaat 7456
Query: 976 gcccccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgcagccgct 1035
||| || ||||| |||||||| || || || | ||||||||||| ||||||||||| ||
Sbjct: 7455 gcctccattcttaatgatgaagtcaaaggcatcatccatgagcccaccgttgcagccact 7396
Query: 1036 gttccctccgtcagtcgagcactctacgagctcctgttcagacagtgtcaccatctcacc 1095
|||| ||| | || ||||| ||||| || || ||||| |||| ||| | |||||||||
Sbjct: 7395 gttctgtccattggttgagcattctacaagttcttgttccgacaatgtgatcatctcacc 7336
Query: 1096 ggtgacgatctggttaacgctttccactgagcttactgcagagaaagcccagcaacttcc 1155
|| || | ||||| | |||||| |||| ||||||||| ||||| |||||||| |||||
Sbjct: 7335 agtaacaagttggttgatgctttctactgtgcttactgcggagaaggcccagcagcttcc 7276
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 8673 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 8614
Query: 315 tcttgctc 322
||||||||
Sbjct: 8613 tcttgctc 8606
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Minus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 7956 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 7897
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaagg 745
|| | ||| || ||||| || || |||||||||||||||
Sbjct: 7896 tcagtgccataaccgacggcaaccacaccatggtcaagg 7858
>ref|NT_107201.1| Oryza sativa (japonica cultivar-group)
Length = 2893592
Score = 180 bits (91), Expect = 1e-042
Identities = 151/171 (88%)
Strand = Plus / Plus
Query: 346 gttgcagacagggtagcccggcgggcagcagctggcgtgatccttgcagcaggtggcgcc 405
|||||||||||||||| | ||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 1602951 gttgcagacagggtagtcaggcgggcagcagctggcatgatccttgcagcaggttgcacc 1603010
Query: 406 ctcgaccgggcagcagccccagaccaagcagacgttcctgaagccaaacgcgcagcagca 465
|| || ||||| |||||||| |||||||||| ||||||||||| || |||||||||||
Sbjct: 1603011 ttcaactgggcaacagccccaaaccaagcagagattcctgaagccgaatgcgcagcagca 1603070
Query: 466 ggtgctgcccgcggagcacgagaagttctcgtcgcagacattgtcaggggc 516
|||||||||||| | ||| |||||||| || |||||||||| |||||||||
Sbjct: 1603071 ggtgctgcccgctgggcaagagaagttatcatcgcagacatggtcaggggc 1603121
Score = 129 bits (65), Expect = 4e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 782 tagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaacc 841
|||||||||||||| |||||||| |||||||| ||||| || ||||| ||||||||||||
Sbjct: 1603478 tagagctggaactcgcggccaccagcctcaatagcaacactgactggttggtgagcaacc 1603537
Query: 842 gccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatgctcaca 901
|||||||| || || ||||| || || | ||| ||||| |||||||||||||||||||||
Sbjct: 1603538 gccttctgaagtgatttctcatcattttgaggtacatcctcaaagccatcgatgctcaca 1603597
Query: 902 accctggcatttt 914
||| | |||||||
Sbjct: 1603598 accttagcatttt 1603610
Score = 115 bits (58), Expect = 6e-023
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1154 ccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcgacgctc 1213
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 1605075 ccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcgacggac 1605134
Query: 1214 tccggcagctcctc 1227
||||||||||||||
Sbjct: 1605135 tccggcagctcctc 1605148
Score = 103 bits (52), Expect = 2e-019
Identities = 193/240 (80%)
Strand = Plus / Plus
Query: 916 cctgttcatgtcgcacttcccgtccacggctctgtaagggtagtcatcttcggtatcgat 975
|||||| ||||| ||||| || || || ||| ||||||| ||||||||||| ||||| ||
Sbjct: 1603708 cctgttgatgtcacacttgccatctacagctttgtaaggatagtcatcttcagtatcaat 1603767
Query: 976 gcccccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgcagccgct 1035
||| || ||||| |||||||| || || || | ||||||||||| ||||||||||| ||
Sbjct: 1603768 gcctccattcttaatgatgaagtcaaaggcatcatccatgagcccaccgttgcagccact 1603827
Query: 1036 gttccctccgtcagtcgagcactctacgagctcctgttcagacagtgtcaccatctcacc 1095
|||| ||| | || ||||| ||||| || || ||||| |||| ||| | |||||||||
Sbjct: 1603828 gttctgtccattggttgagcattctacaagttcttgttccgacaatgtgatcatctcacc 1603887
Query: 1096 ggtgacgatctggttaacgctttccactgagcttactgcagagaaagcccagcaacttcc 1155
|| || | ||||| | |||||| |||| ||||||||| ||||| |||||||| |||||
Sbjct: 1603888 agtaacaagttggttgatgctttctactgtgcttactgcggagaaggcccagcagcttcc 1603947
Score = 99.6 bits (50), Expect = 4e-018
Identities = 204/254 (80%), Gaps = 6/254 (2%)
Strand = Plus / Minus
Query: 999 cgaaagcggcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcact 1058
|||| ||| ||||||||| ||| |||||||||||||||||| |||| ||| |||||
Sbjct: 1635726 cgaacgcgtcgtccatgatcccaccgttgcagccgctgttctgcccgttcctcgcgcact 1635667
Query: 1059 ctacgagctcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgcttt 1118
| || |||||||| || ||||| | ||||| ||| ||||||||||||| ||| | || |
Sbjct: 1635666 ccaccagctcctgctccgacagcgacaccagctcgccggtgacgatcttgttgatgccct 1635607
Query: 1119 ccactgagcttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgg 1178
|||| | | || || ||||| |||||||| || ||||| || ||||||||||||||||
Sbjct: 1635606 ccacggcggcgaccgccgagaacgcccagcagctaccgcactggccctggttcttgacgg 1635547
Query: 1179 gcg---cgacggcgcccttctccctccagtcgacgctctccggcagctcctcggcggcgc 1235
| | ||||||||||||| ||||||||||| ||| ||||||||| ||| || |||
Sbjct: 1635546 gggcgacgacggcgcccttgtccctccagtccacggagtccggcagcgcct---cgacgc 1635490
Query: 1236 cgtcgtggcggtac 1249
||||||||||||||
Sbjct: 1635489 cgtcgtggcggtac 1635476
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 1602550 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 1602609
Query: 315 tcttgctc 322
||||||||
Sbjct: 1602610 tcttgctc 1602617
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccca 426
||||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1636354 gggcagcaggtggagtgatccttgcagcaggtggcgccctcgacggggcagcatcccca 1636296
Score = 85.7 bits (43), Expect = 5e-014
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct: 1635944 gtagagctggaactcgcggccgccggcgtcgatggcgacgctgacgggctggtgcgccac 1635885
Query: 841 cgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatg 895
|||||||| |||||| |||||||||||| ||||| || || ||||| ||||||
Sbjct: 1635884 ggccttctggagcgacagctcgtcgttctcgggcacgtcctcgaagccgtcgatg 1635830
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 1603267 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 1603326
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaagg 745
|| | ||| || ||||| || || |||||||||||||||
Sbjct: 1603327 tcagtgccataaccgacggcaaccacaccatggtcaagg 1603365
Score = 71.9 bits (36), Expect = 8e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 563 cccttcttcgtcgggtaggacgccatcatcgcgatcccgcacttcccagtgctggcgtta 622
|||||||| ||||||||||||||||||| ||||| |||||||| || |||| ||| |
Sbjct: 1636168 cccttcttgatcgggtaggacgccatcatggcgatgccgcacttgccggtgcgcgcggtg 1636109
Query: 623 acgttcctctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcgg 682
||||| | |||||| |||||||| || ||||||||| | || ||||||||||||||
Sbjct: 1636108 acgttgcgctccatgcggatgtagccgttctcgccccagtcgggcccccacgagttgcgc 1636049
Query: 683 acgatccagtag 694
|| ||||||||
Sbjct: 1636048 accgtccagtag 1636037
Score = 71.9 bits (36), Expect = 8e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccag 427
|||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||
Sbjct: 552827 gggcagcagctgtagtgatcatcgcagcaggtggcgccctcgagtgggcagcagccccag 552886
Score = 48.1 bits (24), Expect = 0.012
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 948 tgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatc 999
|||||||||||||||| ||||| ||||| || || || || |||||||||||
Sbjct: 554155 tgtaagggtagtcatcctcggtgtcgattccaccattgttgatgatgaaatc 554206
Score = 48.1 bits (24), Expect = 0.012
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
|||||||||||| | | ||||||||| ||||| ||||| || || ||||||| || ||
Sbjct: 553899 gtagagctggaatgctctgccaccggcttcaattgcaacactgacgggctggtttgctac 553958
Query: 841 cgccttctgcag 852
||||||||||||
Sbjct: 553959 cgccttctgcag 553970
Score = 46.1 bits (23), Expect = 0.046
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 631 ctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcggacgatcca 690
||||||||||| ||| || | ||| ||||| || |||||||||||| | ||||||||
Sbjct: 553087 ctccatacggacgtagccggactcaccccagctcttgccccacgagttcctcacgatcca 553146
Query: 691 gtagtccttcccgttctcggcgccgta 717
||||||||| || ||||| | ||||||
Sbjct: 553147 gtagtccttgccattctctgtgccgta 553173
>gb|CH401190.1| Oryza sativa (japonica cultivar-group) chromosome 4 scaffold000027 genomic
scaffold, whole genome shotgun sequence
Length = 13167135
Score = 180 bits (91), Expect = 1e-042
Identities = 151/171 (88%)
Strand = Plus / Plus
Query: 346 gttgcagacagggtagcccggcgggcagcagctggcgtgatccttgcagcaggtggcgcc 405
|||||||||||||||| | ||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 11798145 gttgcagacagggtagtcaggcgggcagcagctggcatgatccttgcagcaggttgcacc 11798204
Query: 406 ctcgaccgggcagcagccccagaccaagcagacgttcctgaagccaaacgcgcagcagca 465
|| || ||||| |||||||| |||||||||| ||||||||||| || |||||||||||
Sbjct: 11798205 ttcaactgggcaacagccccaaaccaagcagagattcctgaagccgaatgcgcagcagca 11798264
Query: 466 ggtgctgcccgcggagcacgagaagttctcgtcgcagacattgtcaggggc 516
|||||||||||| | ||| |||||||| || |||||||||| |||||||||
Sbjct: 11798265 ggtgctgcccgctgggcaagagaagttatcatcgcagacatggtcaggggc 11798315
Score = 129 bits (65), Expect = 4e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 782 tagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaacc 841
|||||||||||||| |||||||| |||||||| ||||| || ||||| ||||||||||||
Sbjct: 11798672 tagagctggaactcgcggccaccagcctcaatagcaacactgactggttggtgagcaacc 11798731
Query: 842 gccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatgctcaca 901
|||||||| || || ||||| || || | ||| ||||| |||||||||||||||||||||
Sbjct: 11798732 gccttctgaagtgatttctcatcattttgaggtacatcctcaaagccatcgatgctcaca 11798791
Query: 902 accctggcatttt 914
||| | |||||||
Sbjct: 11798792 accttagcatttt 11798804
Score = 115 bits (58), Expect = 6e-023
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1154 ccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcgacgctc 1213
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 11800269 ccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcgacggac 11800328
Query: 1214 tccggcagctcctc 1227
||||||||||||||
Sbjct: 11800329 tccggcagctcctc 11800342
Score = 103 bits (52), Expect = 2e-019
Identities = 193/240 (80%)
Strand = Plus / Plus
Query: 916 cctgttcatgtcgcacttcccgtccacggctctgtaagggtagtcatcttcggtatcgat 975
|||||| ||||| ||||| || || || ||| ||||||| ||||||||||| ||||| ||
Sbjct: 11798902 cctgttgatgtcacacttgccatctacagctttgtaaggatagtcatcttcagtatcaat 11798961
Query: 976 gcccccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgcagccgct 1035
||| || ||||| |||||||| || || || | ||||||||||| ||||||||||| ||
Sbjct: 11798962 gcctccattcttaatgatgaagtcaaaggcatcatccatgagcccaccgttgcagccact 11799021
Query: 1036 gttccctccgtcagtcgagcactctacgagctcctgttcagacagtgtcaccatctcacc 1095
|||| ||| | || ||||| ||||| || || ||||| |||| ||| | |||||||||
Sbjct: 11799022 gttctgtccattggttgagcattctacaagttcttgttccgacaatgtgatcatctcacc 11799081
Query: 1096 ggtgacgatctggttaacgctttccactgagcttactgcagagaaagcccagcaacttcc 1155
|| || | ||||| | |||||| |||| ||||||||| ||||| |||||||| |||||
Sbjct: 11799082 agtaacaagttggttgatgctttctactgtgcttactgcggagaaggcccagcagcttcc 11799141
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 11797744 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 11797803
Query: 315 tcttgctc 322
||||||||
Sbjct: 11797804 tcttgctc 11797811
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccca 426
||||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 11825828 gggcagcaggtggagtgatccttgcagcaggtggcgccctcgacggggcagcatcccca 11825770
Score = 85.7 bits (43), Expect = 5e-014
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct: 11825418 gtagagctggaactcgcggccgccggcgtcgatggcgacgctgacgggctggtgcgccac 11825359
Query: 841 cgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatg 895
|||||||| |||||| |||||||||||| ||||| || || ||||| ||||||
Sbjct: 11825358 ggccttctggagcgacagctcgtcgttctcgggcacgtcctcgaagccgtcgatg 11825304
Score = 85.7 bits (43), Expect = 5e-014
Identities = 185/231 (80%), Gaps = 6/231 (2%)
Strand = Plus / Minus
Query: 1022 ccgttgcagccgctgttccctccgtcagtcgagcactctacgagctcctgttcagacagt 1081
|||||||||||||||||| |||| ||| |||||| || |||||||| || |||||
Sbjct: 11825178 ccgttgcagccgctgttctgcccgttcctcgcgcactccaccagctcctgctccgacagc 11825119
Query: 1082 gtcaccatctcaccggtgacgatctggttaacgctttccactgagcttactgcagagaaa 1141
| ||||| ||| ||||||||||||| ||| | || ||||| | | || || |||||
Sbjct: 11825118 gacaccagctcgccggtgacgatcttgttgatgccctccacggcggcgaccgccgagaac 11825059
Query: 1142 gcccagcaacttccgcattgcccctggttcttgacgggcg---cgacggcgcccttctcc 1198
|||||||| || ||||| || ||||||||||||||||| | ||||||||||||| |||
Sbjct: 11825058 gcccagcagctaccgcactggccctggttcttgacgggggcgacgacggcgcccttgtcc 11824999
Query: 1199 ctccagtcgacgctctccggcagctcctcggcggcgccgtcgtggcggtac 1249
|||||||| ||| ||||||||| ||| || |||||||||||||||||
Sbjct: 11824998 ctccagtccacggagtccggcagcgcct---cgacgccgtcgtggcggtac 11824951
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 11798461 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 11798520
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaagg 745
|| | ||| || ||||| || || |||||||||||||||
Sbjct: 11798521 tcagtgccataaccgacggcaaccacaccatggtcaagg 11798559
Score = 71.9 bits (36), Expect = 8e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 563 cccttcttcgtcgggtaggacgccatcatcgcgatcccgcacttcccagtgctggcgtta 622
|||||||| ||||||||||||||||||| ||||| |||||||| || |||| ||| |
Sbjct: 11825642 cccttcttgatcgggtaggacgccatcatggcgatgccgcacttgccggtgcgcgcggtg 11825583
Query: 623 acgttcctctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcgg 682
||||| | |||||| |||||||| || ||||||||| | || ||||||||||||||
Sbjct: 11825582 acgttgcgctccatgcggatgtagccgttctcgccccagtcgggcccccacgagttgcgc 11825523
Query: 683 acgatccagtag 694
|| ||||||||
Sbjct: 11825522 accgtccagtag 11825511
Score = 71.9 bits (36), Expect = 8e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccag 427
|||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||
Sbjct: 10798767 gggcagcagctgtagtgatcatcgcagcaggtggcgccctcgagtgggcagcagccccag 10798826
Score = 48.1 bits (24), Expect = 0.012
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 948 tgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatc 999
|||||||||||||||| ||||| ||||| || || || || |||||||||||
Sbjct: 10800095 tgtaagggtagtcatcctcggtgtcgattccaccattgttgatgatgaaatc 10800146
Score = 48.1 bits (24), Expect = 0.012
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
|||||||||||| | | ||||||||| ||||| ||||| || || ||||||| || ||
Sbjct: 10799839 gtagagctggaatgctctgccaccggcttcaattgcaacactgacgggctggtttgctac 10799898
Query: 841 cgccttctgcag 852
||||||||||||
Sbjct: 10799899 cgccttctgcag 10799910
Score = 46.1 bits (23), Expect = 0.046
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 631 ctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcggacgatcca 690
||||||||||| ||| || | ||| ||||| || |||||||||||| | ||||||||
Sbjct: 10799027 ctccatacggacgtagccggactcaccccagctcttgccccacgagttcctcacgatcca 10799086
Query: 691 gtagtccttcccgttctcggcgccgta 717
||||||||| || ||||| | ||||||
Sbjct: 10799087 gtagtccttgccattctctgtgccgta 10799113
>gb|CM000141.1| Oryza sativa (japonica cultivar-group) chromosome 4, whole genome shotgun
sequence
Length = 32311234
Score = 180 bits (91), Expect = 1e-042
Identities = 151/171 (88%)
Strand = Plus / Plus
Query: 346 gttgcagacagggtagcccggcgggcagcagctggcgtgatccttgcagcaggtggcgcc 405
|||||||||||||||| | ||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 30942244 gttgcagacagggtagtcaggcgggcagcagctggcatgatccttgcagcaggttgcacc 30942303
Query: 406 ctcgaccgggcagcagccccagaccaagcagacgttcctgaagccaaacgcgcagcagca 465
|| || ||||| |||||||| |||||||||| ||||||||||| || |||||||||||
Sbjct: 30942304 ttcaactgggcaacagccccaaaccaagcagagattcctgaagccgaatgcgcagcagca 30942363
Query: 466 ggtgctgcccgcggagcacgagaagttctcgtcgcagacattgtcaggggc 516
|||||||||||| | ||| |||||||| || |||||||||| |||||||||
Sbjct: 30942364 ggtgctgcccgctgggcaagagaagttatcatcgcagacatggtcaggggc 30942414
Score = 129 bits (65), Expect = 4e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 782 tagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaacc 841
|||||||||||||| |||||||| |||||||| ||||| || ||||| ||||||||||||
Sbjct: 30942771 tagagctggaactcgcggccaccagcctcaatagcaacactgactggttggtgagcaacc 30942830
Query: 842 gccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatgctcaca 901
|||||||| || || ||||| || || | ||| ||||| |||||||||||||||||||||
Sbjct: 30942831 gccttctgaagtgatttctcatcattttgaggtacatcctcaaagccatcgatgctcaca 30942890
Query: 902 accctggcatttt 914
||| | |||||||
Sbjct: 30942891 accttagcatttt 30942903
Score = 115 bits (58), Expect = 6e-023
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1154 ccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcgacgctc 1213
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 30944368 ccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcgacggac 30944427
Query: 1214 tccggcagctcctc 1227
||||||||||||||
Sbjct: 30944428 tccggcagctcctc 30944441
Score = 103 bits (52), Expect = 2e-019
Identities = 193/240 (80%)
Strand = Plus / Plus
Query: 916 cctgttcatgtcgcacttcccgtccacggctctgtaagggtagtcatcttcggtatcgat 975
|||||| ||||| ||||| || || || ||| ||||||| ||||||||||| ||||| ||
Sbjct: 30943001 cctgttgatgtcacacttgccatctacagctttgtaaggatagtcatcttcagtatcaat 30943060
Query: 976 gcccccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgcagccgct 1035
||| || ||||| |||||||| || || || | ||||||||||| ||||||||||| ||
Sbjct: 30943061 gcctccattcttaatgatgaagtcaaaggcatcatccatgagcccaccgttgcagccact 30943120
Query: 1036 gttccctccgtcagtcgagcactctacgagctcctgttcagacagtgtcaccatctcacc 1095
|||| ||| | || ||||| ||||| || || ||||| |||| ||| | |||||||||
Sbjct: 30943121 gttctgtccattggttgagcattctacaagttcttgttccgacaatgtgatcatctcacc 30943180
Query: 1096 ggtgacgatctggttaacgctttccactgagcttactgcagagaaagcccagcaacttcc 1155
|| || | ||||| | |||||| |||| ||||||||| ||||| |||||||| |||||
Sbjct: 30943181 agtaacaagttggttgatgctttctactgtgcttactgcggagaaggcccagcagcttcc 30943240
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 30941843 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 30941902
Query: 315 tcttgctc 322
||||||||
Sbjct: 30941903 tcttgctc 30941910
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccca 426
||||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 30969927 gggcagcaggtggagtgatccttgcagcaggtggcgccctcgacggggcagcatcccca 30969869
Score = 85.7 bits (43), Expect = 5e-014
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct: 30969517 gtagagctggaactcgcggccgccggcgtcgatggcgacgctgacgggctggtgcgccac 30969458
Query: 841 cgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatg 895
|||||||| |||||| |||||||||||| ||||| || || ||||| ||||||
Sbjct: 30969457 ggccttctggagcgacagctcgtcgttctcgggcacgtcctcgaagccgtcgatg 30969403
Score = 85.7 bits (43), Expect = 5e-014
Identities = 185/231 (80%), Gaps = 6/231 (2%)
Strand = Plus / Minus
Query: 1022 ccgttgcagccgctgttccctccgtcagtcgagcactctacgagctcctgttcagacagt 1081
|||||||||||||||||| |||| ||| |||||| || |||||||| || |||||
Sbjct: 30969277 ccgttgcagccgctgttctgcccgttcctcgcgcactccaccagctcctgctccgacagc 30969218
Query: 1082 gtcaccatctcaccggtgacgatctggttaacgctttccactgagcttactgcagagaaa 1141
| ||||| ||| ||||||||||||| ||| | || ||||| | | || || |||||
Sbjct: 30969217 gacaccagctcgccggtgacgatcttgttgatgccctccacggcggcgaccgccgagaac 30969158
Query: 1142 gcccagcaacttccgcattgcccctggttcttgacgggcg---cgacggcgcccttctcc 1198
|||||||| || ||||| || ||||||||||||||||| | ||||||||||||| |||
Sbjct: 30969157 gcccagcagctaccgcactggccctggttcttgacgggggcgacgacggcgcccttgtcc 30969098
Query: 1199 ctccagtcgacgctctccggcagctcctcggcggcgccgtcgtggcggtac 1249
|||||||| ||| ||||||||| ||| || |||||||||||||||||
Sbjct: 30969097 ctccagtccacggagtccggcagcgcct---cgacgccgtcgtggcggtac 30969050
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 30942560 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 30942619
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaagg 745
|| | ||| || ||||| || || |||||||||||||||
Sbjct: 30942620 tcagtgccataaccgacggcaaccacaccatggtcaagg 30942658
Score = 71.9 bits (36), Expect = 8e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 563 cccttcttcgtcgggtaggacgccatcatcgcgatcccgcacttcccagtgctggcgtta 622
|||||||| ||||||||||||||||||| ||||| |||||||| || |||| ||| |
Sbjct: 30969741 cccttcttgatcgggtaggacgccatcatggcgatgccgcacttgccggtgcgcgcggtg 30969682
Query: 623 acgttcctctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcgg 682
||||| | |||||| |||||||| || ||||||||| | || ||||||||||||||
Sbjct: 30969681 acgttgcgctccatgcggatgtagccgttctcgccccagtcgggcccccacgagttgcgc 30969622
Query: 683 acgatccagtag 694
|| ||||||||
Sbjct: 30969621 accgtccagtag 30969610
Score = 71.9 bits (36), Expect = 8e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccag 427
|||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||
Sbjct: 29942866 gggcagcagctgtagtgatcatcgcagcaggtggcgccctcgagtgggcagcagccccag 29942925
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 980 ccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgcagcc 1032
|||||||| |||||||| ||||| ||| |||||||||||||||| | ||||||
Sbjct: 4715553 ccgttcttgatgatgaagtcgaacgcgtcgtccatgagcccgccctcgcagcc 4715501
Score = 48.1 bits (24), Expect = 0.012
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 948 tgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatc 999
|||||||||||||||| ||||| ||||| || || || || |||||||||||
Sbjct: 29944194 tgtaagggtagtcatcctcggtgtcgattccaccattgttgatgatgaaatc 29944245
Score = 48.1 bits (24), Expect = 0.012
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
|||||||||||| | | ||||||||| ||||| ||||| || || ||||||| || ||
Sbjct: 29943938 gtagagctggaatgctctgccaccggcttcaattgcaacactgacgggctggtttgctac 29943997
Query: 841 cgccttctgcag 852
||||||||||||
Sbjct: 29943998 cgccttctgcag 29944009
Score = 46.1 bits (23), Expect = 0.046
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 631 ctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcggacgatcca 690
||||||||||| ||| || | ||| ||||| || |||||||||||| | ||||||||
Sbjct: 29943126 ctccatacggacgtagccggactcaccccagctcttgccccacgagttcctcacgatcca 29943185
Query: 691 gtagtccttcccgttctcggcgccgta 717
||||||||| || ||||| | ||||||
Sbjct: 29943186 gtagtccttgccattctctgtgccgta 29943212
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12,
complete sequence
Length = 190432
Score = 180 bits (91), Expect = 1e-042
Identities = 151/171 (88%)
Strand = Plus / Plus
Query: 346 gttgcagacagggtagcccggcgggcagcagctggcgtgatccttgcagcaggtggcgcc 405
|||||||||||||||| | ||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 119207 gttgcagacagggtagtcaggcgggcagcagctggcatgatccttgcagcaggttgcacc 119266
Query: 406 ctcgaccgggcagcagccccagaccaagcagacgttcctgaagccaaacgcgcagcagca 465
|| || ||||| |||||||| |||||||||| ||||||||||| || |||||||||||
Sbjct: 119267 ttcaactgggcaacagccccaaaccaagcagagattcctgaagccgaatgcgcagcagca 119326
Query: 466 ggtgctgcccgcggagcacgagaagttctcgtcgcagacattgtcaggggc 516
|||||||||||| | ||| |||||||| || |||||||||| |||||||||
Sbjct: 119327 ggtgctgcccgctgggcaagagaagttatcatcgcagacatggtcaggggc 119377
Score = 129 bits (65), Expect = 4e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 782 tagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaacc 841
|||||||||||||| |||||||| |||||||| ||||| || ||||| ||||||||||||
Sbjct: 119734 tagagctggaactcgcggccaccagcctcaatagcaacactgactggttggtgagcaacc 119793
Query: 842 gccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatgctcaca 901
|||||||| || || ||||| || || | ||| ||||| |||||||||||||||||||||
Sbjct: 119794 gccttctgaagtgatttctcatcattttgaggtacatcctcaaagccatcgatgctcaca 119853
Query: 902 accctggcatttt 914
||| | |||||||
Sbjct: 119854 accttagcatttt 119866
Score = 115 bits (58), Expect = 6e-023
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1154 ccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcgacgctc 1213
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 121331 ccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcgacggac 121390
Query: 1214 tccggcagctcctc 1227
||||||||||||||
Sbjct: 121391 tccggcagctcctc 121404
Score = 103 bits (52), Expect = 2e-019
Identities = 193/240 (80%)
Strand = Plus / Plus
Query: 916 cctgttcatgtcgcacttcccgtccacggctctgtaagggtagtcatcttcggtatcgat 975
|||||| ||||| ||||| || || || ||| ||||||| ||||||||||| ||||| ||
Sbjct: 119964 cctgttgatgtcacacttgccatctacagctttgtaaggatagtcatcttcagtatcaat 120023
Query: 976 gcccccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgcagccgct 1035
||| || ||||| |||||||| || || || | ||||||||||| ||||||||||| ||
Sbjct: 120024 gcctccattcttaatgatgaagtcaaaggcatcatccatgagcccaccgttgcagccact 120083
Query: 1036 gttccctccgtcagtcgagcactctacgagctcctgttcagacagtgtcaccatctcacc 1095
|||| ||| | || ||||| ||||| || || ||||| |||| ||| | |||||||||
Sbjct: 120084 gttctgtccattggttgagcattctacaagttcttgttccgacaatgtgatcatctcacc 120143
Query: 1096 ggtgacgatctggttaacgctttccactgagcttactgcagagaaagcccagcaacttcc 1155
|| || | ||||| | |||||| |||| ||||||||| ||||| |||||||| |||||
Sbjct: 120144 agtaacaagttggttgatgctttctactgtgcttactgcggagaaggcccagcagcttcc 120203
Score = 99.6 bits (50), Expect = 4e-018
Identities = 204/254 (80%), Gaps = 6/254 (2%)
Strand = Plus / Minus
Query: 999 cgaaagcggcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcact 1058
|||| ||| ||||||||| ||| |||||||||||||||||| |||| ||| |||||
Sbjct: 151982 cgaacgcgtcgtccatgatcccaccgttgcagccgctgttctgcccgttcctcgcgcact 151923
Query: 1059 ctacgagctcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgcttt 1118
| || |||||||| || ||||| | ||||| ||| ||||||||||||| ||| | || |
Sbjct: 151922 ccaccagctcctgctccgacagcgacaccagctcgccggtgacgatcttgttgatgccct 151863
Query: 1119 ccactgagcttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgg 1178
|||| | | || || ||||| |||||||| || ||||| || ||||||||||||||||
Sbjct: 151862 ccacggcggcgaccgccgagaacgcccagcagctaccgcactggccctggttcttgacgg 151803
Query: 1179 gcg---cgacggcgcccttctccctccagtcgacgctctccggcagctcctcggcggcgc 1235
| | ||||||||||||| ||||||||||| ||| ||||||||| ||| || |||
Sbjct: 151802 gggcgacgacggcgcccttgtccctccagtccacggagtccggcagcgcct---cgacgc 151746
Query: 1236 cgtcgtggcggtac 1249
||||||||||||||
Sbjct: 151745 cgtcgtggcggtac 151732
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 118806 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 118865
Query: 315 tcttgctc 322
||||||||
Sbjct: 118866 tcttgctc 118873
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccca 426
||||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 152610 gggcagcaggtggagtgatccttgcagcaggtggcgccctcgacggggcagcatcccca 152552
Score = 85.7 bits (43), Expect = 5e-014
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct: 152200 gtagagctggaactcgcggccgccggcgtcgatggcgacgctgacgggctggtgcgccac 152141
Query: 841 cgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatg 895
|||||||| |||||| |||||||||||| ||||| || || ||||| ||||||
Sbjct: 152140 ggccttctggagcgacagctcgtcgttctcgggcacgtcctcgaagccgtcgatg 152086
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 119523 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 119582
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaagg 745
|| | ||| || ||||| || || |||||||||||||||
Sbjct: 119583 tcagtgccataaccgacggcaaccacaccatggtcaagg 119621
Score = 71.9 bits (36), Expect = 8e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 563 cccttcttcgtcgggtaggacgccatcatcgcgatcccgcacttcccagtgctggcgtta 622
|||||||| ||||||||||||||||||| ||||| |||||||| || |||| ||| |
Sbjct: 152424 cccttcttgatcgggtaggacgccatcatggcgatgccgcacttgccggtgcgcgcggtg 152365
Query: 623 acgttcctctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcgg 682
||||| | |||||| |||||||| || ||||||||| | || ||||||||||||||
Sbjct: 152364 acgttgcgctccatgcggatgtagccgttctcgccccagtcgggcccccacgagttgcgc 152305
Query: 683 acgatccagtag 694
|| ||||||||
Sbjct: 152304 accgtccagtag 152293
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 180 bits (91), Expect = 1e-042
Identities = 151/171 (88%)
Strand = Plus / Plus
Query: 346 gttgcagacagggtagcccggcgggcagcagctggcgtgatccttgcagcaggtggcgcc 405
|||||||||||||||| | ||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 34207825 gttgcagacagggtagtcaggcgggcagcagctggcatgatccttgcagcaggttgcacc 34207884
Query: 406 ctcgaccgggcagcagccccagaccaagcagacgttcctgaagccaaacgcgcagcagca 465
|| || ||||| |||||||| |||||||||| ||||||||||| || |||||||||||
Sbjct: 34207885 ttcaactgggcaacagccccaaaccaagcagagattcctgaagccgaatgcgcagcagca 34207944
Query: 466 ggtgctgcccgcggagcacgagaagttctcgtcgcagacattgtcaggggc 516
|||||||||||| | ||| |||||||| || |||||||||| |||||||||
Sbjct: 34207945 ggtgctgcccgctgggcaagagaagttatcatcgcagacatggtcaggggc 34207995
Score = 129 bits (65), Expect = 4e-027
Identities = 116/133 (87%)
Strand = Plus / Plus
Query: 782 tagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaacc 841
|||||||||||||| |||||||| |||||||| ||||| || ||||| ||||||||||||
Sbjct: 34208352 tagagctggaactcgcggccaccagcctcaatagcaacactgactggttggtgagcaacc 34208411
Query: 842 gccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatgctcaca 901
|||||||| || || ||||| || || | ||| ||||| |||||||||||||||||||||
Sbjct: 34208412 gccttctgaagtgatttctcatcattttgaggtacatcctcaaagccatcgatgctcaca 34208471
Query: 902 accctggcatttt 914
||| | |||||||
Sbjct: 34208472 accttagcatttt 34208484
Score = 115 bits (58), Expect = 6e-023
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1154 ccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcgacgctc 1213
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 34209949 ccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcgacggac 34210008
Query: 1214 tccggcagctcctc 1227
||||||||||||||
Sbjct: 34210009 tccggcagctcctc 34210022
Score = 103 bits (52), Expect = 2e-019
Identities = 193/240 (80%)
Strand = Plus / Plus
Query: 916 cctgttcatgtcgcacttcccgtccacggctctgtaagggtagtcatcttcggtatcgat 975
|||||| ||||| ||||| || || || ||| ||||||| ||||||||||| ||||| ||
Sbjct: 34208582 cctgttgatgtcacacttgccatctacagctttgtaaggatagtcatcttcagtatcaat 34208641
Query: 976 gcccccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgcagccgct 1035
||| || ||||| |||||||| || || || | ||||||||||| ||||||||||| ||
Sbjct: 34208642 gcctccattcttaatgatgaagtcaaaggcatcatccatgagcccaccgttgcagccact 34208701
Query: 1036 gttccctccgtcagtcgagcactctacgagctcctgttcagacagtgtcaccatctcacc 1095
|||| ||| | || ||||| ||||| || || ||||| |||| ||| | |||||||||
Sbjct: 34208702 gttctgtccattggttgagcattctacaagttcttgttccgacaatgtgatcatctcacc 34208761
Query: 1096 ggtgacgatctggttaacgctttccactgagcttactgcagagaaagcccagcaacttcc 1155
|| || | ||||| | |||||| |||| ||||||||| ||||| |||||||| |||||
Sbjct: 34208762 agtaacaagttggttgatgctttctactgtgcttactgcggagaaggcccagcagcttcc 34208821
Score = 99.6 bits (50), Expect = 4e-018
Identities = 204/254 (80%), Gaps = 6/254 (2%)
Strand = Plus / Minus
Query: 999 cgaaagcggcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcact 1058
|||| ||| ||||||||| ||| |||||||||||||||||| |||| ||| |||||
Sbjct: 34240600 cgaacgcgtcgtccatgatcccaccgttgcagccgctgttctgcccgttcctcgcgcact 34240541
Query: 1059 ctacgagctcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgcttt 1118
| || |||||||| || ||||| | ||||| ||| ||||||||||||| ||| | || |
Sbjct: 34240540 ccaccagctcctgctccgacagcgacaccagctcgccggtgacgatcttgttgatgccct 34240481
Query: 1119 ccactgagcttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgg 1178
|||| | | || || ||||| |||||||| || ||||| || ||||||||||||||||
Sbjct: 34240480 ccacggcggcgaccgccgagaacgcccagcagctaccgcactggccctggttcttgacgg 34240421
Query: 1179 gcg---cgacggcgcccttctccctccagtcgacgctctccggcagctcctcggcggcgc 1235
| | ||||||||||||| ||||||||||| ||| ||||||||| ||| || |||
Sbjct: 34240420 gggcgacgacggcgcccttgtccctccagtccacggagtccggcagcgcct---cgacgc 34240364
Query: 1236 cgtcgtggcggtac 1249
||||||||||||||
Sbjct: 34240363 cgtcgtggcggtac 34240350
Score = 87.7 bits (44), Expect = 1e-014
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 34207424 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 34207483
Query: 315 tcttgctc 322
||||||||
Sbjct: 34207484 tcttgctc 34207491
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Minus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccca 426
||||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 34241228 gggcagcaggtggagtgatccttgcagcaggtggcgccctcgacggggcagcatcccca 34241170
Score = 85.7 bits (43), Expect = 5e-014
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct: 34240818 gtagagctggaactcgcggccgccggcgtcgatggcgacgctgacgggctggtgcgccac 34240759
Query: 841 cgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatg 895
|||||||| |||||| |||||||||||| ||||| || || ||||| ||||||
Sbjct: 34240758 ggccttctggagcgacagctcgtcgttctcgggcacgtcctcgaagccgtcgatg 34240704
Score = 77.8 bits (39), Expect = 1e-011
Identities = 84/99 (84%)
Strand = Plus / Plus
Query: 647 ccagcctcgccccacttcgggccccacgagttgcggacgatccagtagtccttcccgttc 706
|||| ||| ||||||||||||||||| ||||||||||| ||||||||||| || || ||
Sbjct: 34208141 ccagactcaccccacttcgggccccaagagttgcggacaatccagtagtctttgccattg 34208200
Query: 707 tcggcgccgtagccgaccgcgacgacaccatggtcaagg 745
|| | ||| || ||||| || || |||||||||||||||
Sbjct: 34208201 tcagtgccataaccgacggcaaccacaccatggtcaagg 34208239
Score = 71.9 bits (36), Expect = 8e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 563 cccttcttcgtcgggtaggacgccatcatcgcgatcccgcacttcccagtgctggcgtta 622
|||||||| ||||||||||||||||||| ||||| |||||||| || |||| ||| |
Sbjct: 34241042 cccttcttgatcgggtaggacgccatcatggcgatgccgcacttgccggtgcgcgcggtg 34240983
Query: 623 acgttcctctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcgg 682
||||| | |||||| |||||||| || ||||||||| | || ||||||||||||||
Sbjct: 34240982 acgttgcgctccatgcggatgtagccgttctcgccccagtcgggcccccacgagttgcgc 34240923
Query: 683 acgatccagtag 694
|| ||||||||
Sbjct: 34240922 accgtccagtag 34240911
Score = 71.9 bits (36), Expect = 8e-010
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccag 427
|||||||||||| |||||| | |||||||||||||||||||| |||||||||||||||
Sbjct: 33157798 gggcagcagctgtagtgatcatcgcagcaggtggcgccctcgagtgggcagcagccccag 33157857
Score = 58.0 bits (29), Expect = 1e-005
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 980 ccgttctttatgatgaaatcgaaagcggcgtccatgagcccgccgttgcagcc 1032
|||||||| |||||||| ||||| ||| |||||||||||||||| | ||||||
Sbjct: 7213120 ccgttcttgatgatgaagtcgaacgcgtcgtccatgagcccgccctcgcagcc 7213068
Score = 48.1 bits (24), Expect = 0.012
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 948 tgtaagggtagtcatcttcggtatcgatgcccccgttctttatgatgaaatc 999
|||||||||||||||| ||||| ||||| || || || || |||||||||||
Sbjct: 33159126 tgtaagggtagtcatcctcggtgtcgattccaccattgttgatgatgaaatc 33159177
Score = 48.1 bits (24), Expect = 0.012
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
|||||||||||| | | ||||||||| ||||| ||||| || || ||||||| || ||
Sbjct: 33158870 gtagagctggaatgctctgccaccggcttcaattgcaacactgacgggctggtttgctac 33158929
Query: 841 cgccttctgcag 852
||||||||||||
Sbjct: 33158930 cgccttctgcag 33158941
Score = 46.1 bits (23), Expect = 0.046
Identities = 71/87 (81%)
Strand = Plus / Plus
Query: 631 ctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcggacgatcca 690
||||||||||| ||| || | ||| ||||| || |||||||||||| | ||||||||
Sbjct: 33158058 ctccatacggacgtagccggactcaccccagctcttgccccacgagttcctcacgatcca 33158117
Query: 691 gtagtccttcccgttctcggcgccgta 717
||||||||| || ||||| | ||||||
Sbjct: 33158118 gtagtccttgccattctctgtgccgta 33158144
>gb|AU181205.1|AU181205 AU181205 Rice callus (2001) Oryza sativa (japonica cultivar-group)
cDNA clone C10703, mRNA sequence
Length = 446
Score = 165 bits (83), Expect = 7e-038
Identities = 149/171 (87%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 171 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 112
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 111 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 52
Query: 375 agctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccc 425
||||||| ||||||||||||||||| || || || || ||||| |||||||
Sbjct: 51 agctggcatgatccttgcagcaggttgcaccttcaactgggcaacagcccc 1
>gb|AU065873.1|AU065873 AU065873 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S15071_1A, mRNA sequence
Length = 422
Score = 161 bits (81), Expect = 1e-036
Identities = 129/145 (88%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 147 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 88
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 87 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 28
Query: 375 agctggcgtgatccttgcagcaggt 399
||||||| |||||||||||||||||
Sbjct: 27 agctggcatgatccttgcagcaggt 3
>gb|CA999378.1|CA999378 S234G_H03 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 218
Score = 161 bits (81), Expect = 1e-036
Identities = 129/145 (88%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 147 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 88
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 87 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 28
Query: 375 agctggcgtgatccttgcagcaggt 399
||||||| |||||||||||||||||
Sbjct: 27 agctggcatgatccttgcagcaggt 3
>gb|CB000002.1|CB000002 S345V_A12 Rice cold stress germination cDNA library Oryza sativa
(japonica cultivar-group) cDNA 5', mRNA sequence
Length = 431
Score = 161 bits (81), Expect = 1e-036
Identities = 129/145 (88%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||||| ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 150 ctcatgcggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 91
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | ||||||||||
Sbjct: 90 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggcgggcagc 31
Query: 375 agctggcgtgatccttgcagcaggt 399
||||||| |||||||||||||||||
Sbjct: 30 agctggcatgatccttgcagcaggt 6
>dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H07, full
insert sequence
Length = 754
Score = 159 bits (80), Expect = 4e-036
Identities = 152/176 (86%)
Strand = Plus / Minus
Query: 1052 gagcactctacgagctcctgttcagacagtgtcaccatctcaccggtgacgatctggtta 1111
||||| ||||| || || ||||| |||| ||| | ||||||||| || || | |||||
Sbjct: 694 gagcattctacaagttcttgttccgacaatgtgatcatctcaccagtaacaagttggttg 635
Query: 1112 acgctttccactgagcttactgcagagaaagcccagcaacttccgcattgcccctggttc 1171
| |||||| |||| ||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct: 634 atgctttctactgtgcttactgcggagaaggcccagcagcttccgcattggccctggttc 575
Query: 1172 ttgacgggcgcgacggcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 574 ttgacgggggcgacggcgcccttctccctccagtcgacggactccggcagctcctc 519
>gb|AU071079.1|AU071079 AU071079 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10710_2Z, mRNA sequence
Length = 500
Score = 141 bits (71), Expect = 1e-030
Identities = 166/196 (84%), Gaps = 2/196 (1%)
Strand = Plus / Minus
Query: 257 catgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgttc 316
||||||| | ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||||
Sbjct: 199 catgcggngttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgttc 140
Query: 317 ttgctcaccgagcaagttccagctctgacgttgcaga-cagggtagcccggcgggcagca 375
|||| | | ||||| |||||||| | | |||||||| |||||||| | |||||||||||
Sbjct: 139 ttgcncgctgagcaggttccagcccgggtgttgcagaccagggtagtcaggcgggcagca 80
Query: 376 gctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagccccaga-ccaagc 434
|||||| ||||||||||||||||| || || | || ||||| |||||||| | ||||||
Sbjct: 79 gctggcatgatccttgcagcaggttgcacctncaactgggcaacagccccaaacccaagc 20
Query: 435 agacgttcctgaagcc 450
||| |||||||||||
Sbjct: 19 agagattcctgaagcc 4
>gb|AU070887.1|AU070887 AU070887 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10420_2Z, mRNA sequence
Length = 466
Score = 137 bits (69), Expect = 2e-029
Identities = 125/145 (86%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
|||||| |||| ||||||| ||||| ||||||||||| ||||| ||||||| |||| |||
Sbjct: 161 ctcatgnggtgttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggntgt 102
Query: 315 tcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggcgggcagc 374
|||||||| | ||||| |||||||| | | |||||||||||||||| | || |||||||
Sbjct: 101 tcttgctcgctgagcaggttccagcccgggtgttgcagacagggtagtcaggngggcagc 42
Query: 375 agctggcgtgatccttgcagcaggt 399
||| ||| |||||||||||||||||
Sbjct: 41 agcnggcatgatccttgcagcaggt 17
>gb|AU162034.1|AU162034 AU162034 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10605, mRNA sequence
Length = 582
Score = 121 bits (61), Expect = 1e-024
Identities = 73/77 (94%)
Strand = Plus / Minus
Query: 1151 cttccgcattgcccctggttcttgacgggcgcgacggcgcccttctccctccagtcgacg 1210
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 582 cttccgcattggccctggttcttgacgggggcgacggcgcccttctccctccagtcgacg 523
Query: 1211 ctctccggcagctcctc 1227
|||||||||||||||
Sbjct: 522 gactccggcagctcctc 506
>gb|AU076223.1|AU076223 AU076223 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10050_1A, mRNA sequence
Length = 598
Score = 113 bits (57), Expect = 2e-022
Identities = 73/77 (94%), Gaps = 1/77 (1%)
Strand = Plus / Minus
Query: 1152 ttccgcattg-cccctggttcttgacgggcgcgacggcgcccttctccctccagtcgacg 1210
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 584 ttccgcattggcccctggttcttgacgggggcgacggcgcccttctccctccagtcgacg 525
Query: 1211 ctctccggcagctcctc 1227
|||||||||||||||
Sbjct: 524 gactccggcagctcctc 508
>gb|AU095629.1|AU095629 AU095629 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10943, mRNA sequence
Length = 722
Score = 105 bits (53), Expect = 6e-020
Identities = 104/117 (88%), Gaps = 3/117 (2%)
Strand = Plus / Minus
Query: 1114 gctttccactgagcttactgcaga-gaaagcccagcaacttccgcattgcccctggttct 1172
|||||| |||| ||||||||| || ||| |||||||| |||||||||| ||||||||||
Sbjct: 624 gctttctactgtgcttactgcggaagaaggcccagcagtttccgcattggccctggttct 565
Query: 1173 tg-acgggcgcgacggcgcccttct-ccctccagtcgacgctctccggcagctcctc 1227
|| ||||| |||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 564 tgaacgggggcgacggcgcccttctcccctccagtcgacggactccggcagctcctc 508
>dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E06, full
insert sequence
Length = 1722
Score = 99.6 bits (50), Expect = 4e-018
Identities = 204/254 (80%), Gaps = 6/254 (2%)
Strand = Plus / Minus
Query: 999 cgaaagcggcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcact 1058
|||| ||| ||||||||| ||| |||||||||||||||||| |||| ||| |||||
Sbjct: 799 cgaacgcgtcgtccatgatcccaccgttgcagccgctgttctgcccgttcctcgcgcact 740
Query: 1059 ctacgagctcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgcttt 1118
| || |||||||| || ||||| | ||||| ||| ||||||||||||| ||| | || |
Sbjct: 739 ccaccagctcctgctccgacagcgacaccagctcgccggtgacgatcttgttgatgccct 680
Query: 1119 ccactgagcttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgg 1178
|||| | | || || ||||| |||||||| || ||||| || ||||||||||||||||
Sbjct: 679 ccacggcggcgaccgccgagaacgcccagcagctaccgcactggccctggttcttgacgg 620
Query: 1179 gcg---cgacggcgcccttctccctccagtcgacgctctccggcagctcctcggcggcgc 1235
| | ||||||||||||| ||||||||||| ||| ||||||||| ||| || |||
Sbjct: 619 gggcgacgacggcgcccttgtccctccagtccacggagtccggcagcgcct---cgacgc 563
Query: 1236 cgtcgtggcggtac 1249
||||||||||||||
Sbjct: 562 cgtcgtggcggtac 549
Score = 85.7 bits (43), Expect = 5e-014
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 308 gggctgttcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggc 367
||||||||||||||| |||||||| | ||| || |||||||||| || || ||
Sbjct: 1487 gggctgttcttgctcttggagcaagtgcgagccttggcgttgcagacgggatactccttg 1428
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccca 426
||||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1427 gggcagcaggtggagtgatccttgcagcaggtggcgccctcgacggggcagcatcccca 1369
Score = 85.7 bits (43), Expect = 5e-014
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct: 1017 gtagagctggaactcgcggccgccggcgtcgatggcgacgctgacgggctggtgcgccac 958
Query: 841 cgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatg 895
|||||||| |||||| |||||||||||| ||||| || || ||||| ||||||
Sbjct: 957 ggccttctggagcgacagctcgtcgttctcgggcacgtcctcgaagccgtcgatg 903
Score = 71.9 bits (36), Expect = 8e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 563 cccttcttcgtcgggtaggacgccatcatcgcgatcccgcacttcccagtgctggcgtta 622
|||||||| ||||||||||||||||||| ||||| |||||||| || |||| ||| |
Sbjct: 1241 cccttcttgatcgggtaggacgccatcatggcgatgccgcacttgccggtgcgcgcggtg 1182
Query: 623 acgttcctctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcgg 682
||||| | |||||| |||||||| || ||||||||| | || ||||||||||||||
Sbjct: 1181 acgttgcgctccatgcggatgtagccgttctcgccccagtcgggcccccacgagttgcgc 1122
Query: 683 acgatccagtag 694
|| ||||||||
Sbjct: 1121 accgtccagtag 1110
>ref|XM_474296.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1473
Score = 99.6 bits (50), Expect = 4e-018
Identities = 204/254 (80%), Gaps = 6/254 (2%)
Strand = Plus / Minus
Query: 999 cgaaagcggcgtccatgagcccgccgttgcagccgctgttccctccgtcagtcgagcact 1058
|||| ||| ||||||||| ||| |||||||||||||||||| |||| ||| |||||
Sbjct: 688 cgaacgcgtcgtccatgatcccaccgttgcagccgctgttctgcccgttcctcgcgcact 629
Query: 1059 ctacgagctcctgttcagacagtgtcaccatctcaccggtgacgatctggttaacgcttt 1118
| || |||||||| || ||||| | ||||| ||| ||||||||||||| ||| | || |
Sbjct: 628 ccaccagctcctgctccgacagcgacaccagctcgccggtgacgatcttgttgatgccct 569
Query: 1119 ccactgagcttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgg 1178
|||| | | || || ||||| |||||||| || ||||| || ||||||||||||||||
Sbjct: 568 ccacggcggcgaccgccgagaacgcccagcagctaccgcactggccctggttcttgacgg 509
Query: 1179 gcg---cgacggcgcccttctccctccagtcgacgctctccggcagctcctcggcggcgc 1235
| | ||||||||||||| ||||||||||| ||| ||||||||| ||| || |||
Sbjct: 508 gggcgacgacggcgcccttgtccctccagtccacggagtccggcagcgcct---cgacgc 452
Query: 1236 cgtcgtggcggtac 1249
||||||||||||||
Sbjct: 451 cgtcgtggcggtac 438
Score = 85.7 bits (43), Expect = 5e-014
Identities = 100/119 (84%)
Strand = Plus / Minus
Query: 308 gggctgttcttgctcaccgagcaagttccagctctgacgttgcagacagggtagcccggc 367
||||||||||||||| |||||||| | ||| || |||||||||| || || ||
Sbjct: 1376 gggctgttcttgctcttggagcaagtgcgagccttggcgttgcagacgggatactccttg 1317
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccca 426
||||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1316 gggcagcaggtggagtgatccttgcagcaggtggcgccctcgacggggcagcatcccca 1258
Score = 85.7 bits (43), Expect = 5e-014
Identities = 97/115 (84%)
Strand = Plus / Minus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct: 906 gtagagctggaactcgcggccgccggcgtcgatggcgacgctgacgggctggtgcgccac 847
Query: 841 cgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatg 895
|||||||| |||||| |||||||||||| ||||| || || ||||| ||||||
Sbjct: 846 ggccttctggagcgacagctcgtcgttctcgggcacgtcctcgaagccgtcgatg 792
Score = 71.9 bits (36), Expect = 8e-010
Identities = 108/132 (81%)
Strand = Plus / Minus
Query: 563 cccttcttcgtcgggtaggacgccatcatcgcgatcccgcacttcccagtgctggcgtta 622
|||||||| ||||||||||||||||||| ||||| |||||||| || |||| ||| |
Sbjct: 1130 cccttcttgatcgggtaggacgccatcatggcgatgccgcacttgccggtgcgcgcggtg 1071
Query: 623 acgttcctctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcgg 682
||||| | |||||| |||||||| || ||||||||| | || ||||||||||||||
Sbjct: 1070 acgttgcgctccatgcggatgtagccgttctcgccccagtcgggcccccacgagttgcgc 1011
Query: 683 acgatccagtag 694
|| ||||||||
Sbjct: 1010 accgtccagtag 999
>gb|C96892.1|C96892 C96892 Rice callus Oryza sativa (japonica cultivar-group) cDNA
clone C50055_6Z, mRNA sequence
Length = 393
Score = 89.7 bits (45), Expect = 3e-015
Identities = 73/83 (87%)
Strand = Plus / Minus
Query: 255 ctcatgcggtgctcagcttggcgagggtgcgcttcaaggccttgacgctcagtgggctgt 314
||||||||| | ||||||| ||||| ||||||||||| ||||| ||||||| ||||||||
Sbjct: 94 ctcatgcggngttcagcttagcgagcgtgcgcttcaaagccttcacgctcaatgggctgt 35
Query: 315 tcttgctcaccgagcaagttcca 337
|||||||| | ||||| ||||||
Sbjct: 34 tcttgctcnctgagcaggttcca 12
>gb|AACV01010644.1| Oryza sativa (japonica cultivar-group) chromosome 4 Ctg010644, whole
genome shotgun sequence
Length = 34509
Score = 85.7 bits (43), Expect = 5e-014
Identities = 185/231 (80%), Gaps = 6/231 (2%)
Strand = Plus / Plus
Query: 1022 ccgttgcagccgctgttccctccgtcagtcgagcactctacgagctcctgttcagacagt 1081
|||||||||||||||||| |||| ||| |||||| || |||||||| || |||||
Sbjct: 25748 ccgttgcagccgctgttctgcccgttcctcgcgcactccaccagctcctgctccgacagc 25807
Query: 1082 gtcaccatctcaccggtgacgatctggttaacgctttccactgagcttactgcagagaaa 1141
| ||||| ||| ||||||||||||| ||| | || ||||| | | || || |||||
Sbjct: 25808 gacaccagctcgccggtgacgatcttgttgatgccctccacggcggcgaccgccgagaac 25867
Query: 1142 gcccagcaacttccgcattgcccctggttcttgacgggcg---cgacggcgcccttctcc 1198
|||||||| || ||||| || ||||||||||||||||| | ||||||||||||| |||
Sbjct: 25868 gcccagcagctaccgcactggccctggttcttgacgggggcgacgacggcgcccttgtcc 25927
Query: 1199 ctccagtcgacgctctccggcagctcctcggcggcgccgtcgtggcggtac 1249
|||||||| ||| ||||||||| ||| || |||||||||||||||||
Sbjct: 25928 ctccagtccacggagtccggcagcgcct---cgacgccgtcgtggcggtac 25975
Score = 85.7 bits (43), Expect = 5e-014
Identities = 97/115 (84%)
Strand = Plus / Plus
Query: 781 gtagagctggaactcccggccaccggcctcaatggcaacgctaactggctggtgagcaac 840
||||||||||||||| ||||| ||||| || ||||| ||||| || |||||||| || ||
Sbjct: 25508 gtagagctggaactcgcggccgccggcgtcgatggcgacgctgacgggctggtgcgccac 25567
Query: 841 cgccttctgcagcgacttctcgtcgttctcaggcacatcttcaaagccatcgatg 895
|||||||| |||||| |||||||||||| ||||| || || ||||| ||||||
Sbjct: 25568 ggccttctggagcgacagctcgtcgttctcgggcacgtcctcgaagccgtcgatg 25622
Score = 85.7 bits (43), Expect = 5e-014
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 368 gggcagcagctggcgtgatccttgcagcaggtggcgccctcgaccgggcagcagcccca 426
||||||||| ||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 25098 gggcagcaggtggagtgatccttgcagcaggtggcgccctcgacggggcagcatcccca 25156
Score = 71.9 bits (36), Expect = 8e-010
Identities = 108/132 (81%)
Strand = Plus / Plus
Query: 563 cccttcttcgtcgggtaggacgccatcatcgcgatcccgcacttcccagtgctggcgtta 622
|||||||| ||||||||||||||||||| ||||| |||||||| || |||| ||| |
Sbjct: 25284 cccttcttgatcgggtaggacgccatcatggcgatgccgcacttgccggtgcgcgcggtg 25343
Query: 623 acgttcctctccatacggatgtaaccagcctcgccccacttcgggccccacgagttgcgg 682
||||| | |||||| |||||||| || ||||||||| | || ||||||||||||||
Sbjct: 25344 acgttgcgctccatgcggatgtagccgttctcgccccagtcgggcccccacgagttgcgc 25403
Query: 683 acgatccagtag 694
|| ||||||||
Sbjct: 25404 accgtccagtag 25415
>gb|AU095627.1|AU095627 AU095627 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10919, mRNA sequence
Length = 716
Score = 83.8 bits (42), Expect = 2e-013
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 1128 ttactgcagagaaagcccagcaacttccgcattgcccctggttcttgacgggcgcgacgg 1187
||||||| ||||||||||||||| ||||||||||||| | ||||||||||| |||||||
Sbjct: 613 ttactgcggagaaagcccagcaanttccgcattgccctggtttcttgacggg-gcgacgg 555
Query: 1188 cgcccttct 1196
|||||||||
Sbjct: 554 cgcccttct 546
>gb|AU162033.1|AU162033 AU162033 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10604, mRNA sequence
Length = 558
Score = 81.8 bits (41), Expect = 8e-013
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 1175 acgggcgcgacggcgcccttctccctccagtcgacgctctccggcagctcctc 1227
||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 558 acgggggcgacggcgcccttctccctccagtcgacggactccggcagctcctc 506
>gb|AU095625.1|AU095625 AU095625 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10917, mRNA sequence
Length = 713
Score = 79.8 bits (40), Expect = 3e-012
Identities = 61/67 (91%), Gaps = 1/67 (1%)
Strand = Plus / Minus
Query: 1161 gcccctggttcttgacgggcg-cgacggcgcccttctccctccagtcgacgctctccggc 1219
||||||| ||||||||||| | ||||||||||||||||| ||||||||||| |||||||
Sbjct: 577 gcccctgnttcttgacggggggcgacggcgcccttctccttccagtcgacggactccggc 518
Query: 1220 agctcct 1226
|||||||
Sbjct: 517 agctcct 511
>gb|AU162036.1|AU162036 AU162036 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10640, mRNA sequence
Length = 559
Score = 77.8 bits (39), Expect = 1e-011
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 1181 gcgacggcgcccttctccctccagtcgacgctctccggcagctcctc 1227
|||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 556 gcgacggcgcccttctccctccagtcgacggactccggcagctcctc 510
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,578,494
Number of Sequences: 438736
Number of extensions: 1578494
Number of successful extensions: 10819
Number of sequences better than 0.5: 171
Number of HSP's better than 0.5 without gapping: 173
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 10037
Number of HSP's gapped (non-prelim): 718
length of query: 1264
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1243
effective length of database: 2,791,206,460
effective search space: 3469469629780
effective search space used: 3469469629780
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)