BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2922023.2.1
(1122 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CB641553.1|CB641553 OSJNEb01E04.r OSJNEb Oryza sativa (j... 339 2e-090
gb|CB641634.1|CB641634 OSJNEb01G03.r OSJNEb Oryza sativa (j... 339 2e-090
gb|CB644001.1|CB644001 OSJNEb05A05.r OSJNEb Oryza sativa (j... 339 2e-090
gb|CB647610.1|CB647610 OSJNEb10J18.r OSJNEb Oryza sativa (j... 339 2e-090
gb|CB648468.1|CB648468 OSJNEb11N19.r OSJNEb Oryza sativa (j... 339 2e-090
gb|CB649610.1|CB649610 OSJNEb13K08.r OSJNEb Oryza sativa (j... 339 2e-090
gb|CB650806.1|CB650806 OSJNEb15H11.r OSJNEb Oryza sativa (j... 339 2e-090
dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA... 339 2e-090
dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA... 339 2e-090
dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA... 339 2e-090
dbj|AP003928.3| Oryza sativa (japonica cultivar-group) geno... 339 2e-090
gb|AACV01018980.1| Oryza sativa (japonica cultivar-group) c... 339 2e-090
ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA 339 2e-090
ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-... 339 2e-090
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 339 2e-090
gb|CH401230.1| Oryza sativa (japonica cultivar-group) chrom... 339 2e-090
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 339 2e-090
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 339 2e-090
gb|CB649732.1|CB649732 OSJNEb13N08.r OSJNEb Oryza sativa (j... 331 5e-088
gb|AU057730.1|AU057730 AU057730 Oryza sativa mature leaf Ni... 325 3e-086
gb|CB641552.1|CB641552 OSJNEb01E04.f OSJNEb Oryza sativa (j... 212 3e-052
gb|CB641633.1|CB641633 OSJNEb01G03.f OSJNEb Oryza sativa (j... 212 3e-052
gb|CB644000.1|CB644000 OSJNEb05A05.f OSJNEb Oryza sativa (j... 212 3e-052
gb|CB648467.1|CB648467 OSJNEb11N19.f OSJNEb Oryza sativa (j... 212 3e-052
gb|CB647609.1|CB647609 OSJNEb10J18.f OSJNEb Oryza sativa (j... 204 7e-050
gb|CB649731.1|CB649731 OSJNEb13N08.f OSJNEb Oryza sativa (j... 188 4e-045
gb|CB650805.1|CB650805 OSJNEb15H11.f OSJNEb Oryza sativa (j... 188 4e-045
gb|AU057731.1|AU057731 AU057731 Oryza sativa mature leaf Ni... 180 1e-042
gb|AU070491.1|AU070491 AU070491 Rice green shoot Oryza sati... 176 2e-041
gb|AU070651.1|AU070651 AU070651 Rice cDNA from young root O... 176 2e-041
gb|AU108194.1|AU108194 AU108194 Rice cDNA from young root O... 176 2e-041
gb|CV723743.1|CV723743 root--04-K05.g1 Rice root lambda pha... 176 2e-041
gb|CA756361.1|CA756361 BR030040000_PLATE_H07_56_063.ab1 OA ... 159 4e-036
gb|AU078668.1|AU078668 AU078668 Rice panicle at ripening st... 149 4e-033
dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA... 111 8e-022
dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA... 111 8e-022
dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA... 111 8e-022
dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA... 111 8e-022
gb|AACV01003113.1| Oryza sativa (japonica cultivar-group) c... 111 8e-022
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 111 8e-022
ref|NM_189456.1| Oryza sativa (japonica cultivar-group), p... 111 8e-022
ref|NT_079923.2| Oryza sativa (japonica cultivar-group) 111 8e-022
dbj|AP003277.2| Oryza sativa (japonica cultivar-group) geno... 111 8e-022
gb|CH401168.1| Oryza sativa (japonica cultivar-group) chrom... 111 8e-022
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 111 8e-022
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 111 8e-022
dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, c... 109 3e-021
gb|AC091089.1|AC091089 Oryza sativa (japonica cultivar-grou... 109 3e-021
dbj|AP003380.3| Oryza sativa (japonica cultivar-group) geno... 109 3e-021
gb|AACV01002890.1| Oryza sativa (japonica cultivar-group) c... 109 3e-021
ref|XM_463580.1| Oryza sativa (japonica cultivar-group), p... 109 3e-021
ref|NT_079927.2| Oryza sativa (japonica cultivar-group) 109 3e-021
dbj|AP006531.3| Oryza sativa (japonica cultivar-group) geno... 109 3e-021
gb|C20190.1|C20190 C20190 Rice panicle at ripening stage Or... 107 1e-020
dbj|AK107506.1| Oryza sativa (japonica cultivar-group) cDNA... 107 1e-020
gb|AACV01010644.1| Oryza sativa (japonica cultivar-group) c... 107 1e-020
ref|XM_474296.1| Oryza sativa (japonica cultivar-group), p... 107 1e-020
ref|NT_107201.1| Oryza sativa (japonica cultivar-group) 107 1e-020
gb|CH401190.1| Oryza sativa (japonica cultivar-group) chrom... 107 1e-020
gb|CM000141.1| Oryza sativa (japonica cultivar-group) chrom... 107 1e-020
emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromoso... 107 1e-020
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 107 1e-020
dbj|AK106508.1| Oryza sativa (japonica cultivar-group) cDNA... 105 5e-020
gb|AY335487.1| Oryza sativa (japonica cultivar-group) cyste... 105 5e-020
gb|AC129716.3| Oryza sativa (japonica cultivar-group) chrom... 105 5e-020
gb|AACV01010747.1| Oryza sativa (japonica cultivar-group) c... 105 5e-020
ref|NT_079870.2| Oryza sativa (japonica cultivar-group) 105 5e-020
gb|CH401191.1| Oryza sativa (japonica cultivar-group) chrom... 105 5e-020
gb|CM000142.1| Oryza sativa (japonica cultivar-group) chrom... 105 5e-020
dbj|AP008211.1| Oryza sativa (japonica cultivar-group) geno... 105 5e-020
gb|C96856.1|C96856 C96856 Rice callus Oryza sativa (japonic... 98 1e-017
gb|CA997922.1|CA997922 S234C1_G02 Rice cold stress germinat... 92 8e-016
dbj|AK071495.1| Oryza sativa (japonica cultivar-group) cDNA... 92 8e-016
emb|X80876.1|OSCYSPRO O.sativa mRNA for cysteine protease 92 8e-016
gb|CB667976.1|CB667976 OSJNEd15J08.f OSJNEd Oryza sativa (j... 90 3e-015
gb|CB675127.1|CB675127 OSJNEe10K09.f OSJNEe Oryza sativa (j... 90 3e-015
gb|CB678060.1|CB678060 OSJNEe15J20.f OSJNEe Oryza sativa (j... 90 3e-015
gb|CF306821.1|CF306821 HDA1--04-P01.g1 OsHDAC1-overexpressi... 90 3e-015
dbj|D90407.1|RICOZB Oryza sativa (japonica cultivar-group) ... 90 3e-015
dbj|AK073373.1| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-015
dbj|AK099358.1| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-015
dbj|AK107749.1| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-015
dbj|AK109371.2| Oryza sativa (japonica cultivar-group) cDNA... 90 3e-015
ref|XM_474291.1| Oryza sativa (japonica cultivar-group), p... 90 3e-015
gb|C96846.1|C96846 C96846 Rice callus Oryza sativa (japonic... 76 5e-011
gb|CB668015.1|CB668015 OSJNEd15K09.f OSJNEd Oryza sativa (j... 76 5e-011
gb|AACV01008740.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
gb|AACV01010643.1| Oryza sativa (japonica cultivar-group) c... 74 2e-010
ref|XM_474851.1| Oryza sativa (japonica cultivar-group), p... 74 2e-010
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 74 2e-010
gb|CH401185.1| Oryza sativa (japonica cultivar-group) chrom... 74 2e-010
emb|AL606994.3|OSJN00114 Oryza sativa genomic DNA, chromoso... 74 2e-010
gb|AY781344.1| Oryza sativa (japonica cultivar-group) putat... 74 2e-010
dbj|AP003852.2| Oryza sativa (japonica cultivar-group) geno... 72 7e-010
gb|AACV01001025.1| Oryza sativa (japonica cultivar-group) c... 72 7e-010
ref|NM_183998.1| Oryza sativa (japonica cultivar-group), p... 72 7e-010
ref|NM_184000.1| Oryza sativa (japonica cultivar-group), p... 72 7e-010
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 72 7e-010
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 72 7e-010
gb|AU162034.1|AU162034 AU162034 Rice cDNA from young root O... 70 3e-009
gb|AU092283.1|AU092283 AU092283 Rice callus Oryza sativa (j... 68 1e-008
dbj|AB004648.1| Oryza sativa (japonica cultivar-group) RepA... 68 1e-008
ref|NT_107115.1| Oryza sativa (japonica cultivar-group) 68 1e-008
gb|AACV01022682.1| Oryza sativa (japonica cultivar-group) c... 68 1e-008
gb|CH401261.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 68 1e-008
gb|AC145324.3| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 68 1e-008
gb|AU172507.1|AU172507 AU172507 Rice panicle at flowering s... 64 2e-007
gb|AU184597.1|AU184597 AU184597 Rice root Oryza sativa (jap... 64 2e-007
dbj|AP003759.2| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
dbj|AP004342.5| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|AACV01010748.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
gb|AACV01015030.1| Oryza sativa (japonica cultivar-group) c... 64 2e-007
ref|XM_476390.1| Oryza sativa (japonica cultivar-group), mRNA 64 2e-007
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 64 2e-007
gb|CH401218.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 64 2e-007
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 64 2e-007
gb|AU071094.1|AU071094 AU071094 Rice cDNA from young root O... 62 7e-007
gb|AU166714.1|AU166714 AU166714 Rice callus (2001) Oryza sa... 62 7e-007
gb|CV720585.1|CV720585 YBH--01-C04.b1 Rice before heading y... 62 7e-007
gb|CV720949.1|CV720949 YBH--02-G04.b1 Rice before heading y... 62 7e-007
dbj|AK071091.1| Oryza sativa (japonica cultivar-group) cDNA... 62 7e-007
dbj|AP005312.2| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
dbj|AP005702.3| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|AACV01000451.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
gb|AACV01019835.1| Oryza sativa (japonica cultivar-group) c... 62 7e-007
ref|XM_450799.1| Oryza sativa (japonica cultivar-group), mRNA 62 7e-007
ref|XM_506663.1| PREDICTED Oryza sativa (japonica cultivar-... 62 7e-007
ref|NM_188465.1| Oryza sativa (japonica cultivar-group), Oz... 62 7e-007
ref|NT_036312.3| Oryza sativa (japonica cultivar-group) 62 7e-007
ref|NT_107082.1| Oryza sativa (japonica cultivar-group) 62 7e-007
dbj|AP001633.2| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
dbj|AP002861.2| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|CH401242.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CH401164.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
gb|CM000146.1| Oryza sativa (japonica cultivar-group) chrom... 62 7e-007
dbj|AP008215.1| Oryza sativa (japonica cultivar-group) geno... 62 7e-007
gb|CB656442.1|CB656442 OSJNEc10M19.f OSJNEc Oryza sativa (j... 60 3e-006
gb|AC135225.4| Oryza sativa chromosome 3 BAC OJ1112_G08 gen... 60 3e-006
gb|AC092556.8| Oryza sativa chromosome 3 BAC OSJNBa0047E24 ... 60 3e-006
emb|AL732642.4|CNS08C9H Oryza sativa chromosome 12, . BAC O... 60 3e-006
emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC O... 60 3e-006
ref|NT_079833.2| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|AACV01007933.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
gb|AACV01011286.1| Oryza sativa (japonica cultivar-group) c... 60 3e-006
ref|XM_469786.1| Oryza sativa (japonica cultivar-group), mRNA 60 3e-006
ref|NT_107186.1| Oryza sativa (japonica cultivar-group) 60 3e-006
gb|CH401194.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
dbj|AP008218.1| Oryza sativa (japonica cultivar-group) geno... 60 3e-006
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AF377947.3| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|DP000011.1| Oryza sativa (japonica cultivar-group) chrom... 60 3e-006
gb|AU076223.1|AU076223 AU076223 Rice cDNA from young root O... 58 1e-005
gb|AU092094.1|AU092094 AU092094 Rice callus Oryza sativa (j... 58 1e-005
gb|AU166713.1|AU166713 AU166713 Rice callus (2001) Oryza sa... 58 1e-005
gb|AU181370.1|AU181370 AU181370 Rice callus (2001) Oryza sa... 58 1e-005
gb|AU181686.1|AU181686 AU181686 Rice callus (2001) Oryza sa... 58 1e-005
gb|AU182034.1|AU182034 AU182034 Rice callus (2001) Oryza sa... 58 1e-005
gb|CB657193.1|CB657193 OSJNEc12F12.r OSJNEc Oryza sativa (j... 58 1e-005
gb|CF297009.1|CF297009 30DGS--07-J23.g1 Rice leaf plasmid c... 58 1e-005
gb|CF297402.1|CF297402 30DGS--08-E01.b1 Rice leaf plasmid c... 58 1e-005
gb|CF323898.1|CF323898 HDN--05-B01.g1 OsHDAC1-overexpressin... 58 1e-005
dbj|AP005708.1| Oryza sativa (japonica cultivar-group) chro... 58 1e-005
dbj|AK067453.1| Oryza sativa (japonica cultivar-group) cDNA... 58 1e-005
ref|NT_107232.1| Oryza sativa (japonica cultivar-group) 58 1e-005
dbj|AP002869.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
dbj|AP003143.2| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|AACV01000934.1| Oryza sativa (japonica cultivar-group) c... 58 1e-005
gb|AACV01025858.1| Oryza sativa (japonica cultivar-group) C... 58 1e-005
dbj|AP003724.2| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
ref|NM_183859.1| Oryza sativa (japonica cultivar-group), p... 58 1e-005
gb|CH401344.1| Oryza sativa (japonica cultivar-group) scaff... 58 1e-005
dbj|AP008212.1| Oryza sativa (japonica cultivar-group) geno... 58 1e-005
gb|C71861.1|C71861 C71861 Rice panicle at flowering stage O... 56 4e-005
gb|C19617.2|C19617 C19617 Rice panicle at ripening stage Or... 56 4e-005
dbj|AK110832.1| Oryza sativa (japonica cultivar-group) cDNA... 56 4e-005
ref|NT_107122.1| Oryza sativa (japonica cultivar-group) 56 4e-005
dbj|AP002866.1| Oryza sativa (japonica cultivar-group) geno... 56 4e-005
gb|AACV01001819.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
gb|AACV01007563.1| Oryza sativa (japonica cultivar-group) c... 56 4e-005
ref|NM_192773.1| Oryza sativa (japonica cultivar-group), p... 56 4e-005
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 56 4e-005
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
gb|AC146913.2| Oryza sativa (japonica cultivar-group) chrom... 56 4e-005
dbj|AP005711.1| Oryza sativa (japonica cultivar-group) chro... 54 2e-004
dbj|AK070060.1| Oryza sativa (japonica cultivar-group) cDNA... 54 2e-004
ref|NT_107078.1| Oryza sativa (japonica cultivar-group) 54 2e-004
gb|AACV01020549.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
gb|AACV01020554.1| Oryza sativa (japonica cultivar-group) c... 54 2e-004
dbj|AP006170.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
dbj|AP006171.2| Oryza sativa (japonica cultivar-group) geno... 54 2e-004
gb|AU095629.1|AU095629 AU095629 Rice cDNA from young root O... 52 7e-004
gb|AU108225.1|AU108225 AU108225 Rice callus Oryza sativa (j... 52 7e-004
gb|AC108757.1| Oryza sativa (japonica cultivar-group) chrom... 52 7e-004
dbj|AK072767.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
dbj|AK099197.1| Oryza sativa (japonica cultivar-group) cDNA... 52 7e-004
gb|AACV01020338.1| Oryza sativa (japonica cultivar-group) c... 52 7e-004
gb|AU181203.1|AU181203 AU181203 Rice callus (2001) Oryza sa... 50 0.003
gb|AU181403.1|AU181403 AU181403 Rice callus (2001) Oryza sa... 50 0.003
dbj|AP003764.3| Oryza sativa (japonica cultivar-group) geno... 50 0.003
gb|AACV01001023.1| Oryza sativa (japonica cultivar-group) c... 50 0.003
ref|NM_183860.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NM_183997.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NM_184003.1| Oryza sativa (japonica cultivar-group), p... 50 0.003
ref|NM_188466.1| Oryza sativa (japonica cultivar-group), Oz... 50 0.003
gb|CB645294.1|CB645294 OSJNEb06O03.f OSJNEb Oryza sativa (j... 48 0.010
gb|CB645295.1|CB645295 OSJNEb06O03.r OSJNEb Oryza sativa (j... 48 0.010
dbj|AK108733.1| Oryza sativa (japonica cultivar-group) cDNA... 48 0.010
dbj|AP005396.3| Oryza sativa (japonica cultivar-group) geno... 48 0.010
gb|AACV01020542.1| Oryza sativa (japonica cultivar-group) c... 48 0.010
gb|CL517549.1|CL517549 SAC1D01 Flanking Sequence Tag of Ory... 46 0.041
gb|C27328.1|C27328 C27328 Rice callus cDNA Oryza sativa (ja... 46 0.041
gb|AACV01020154.1| Oryza sativa (japonica cultivar-group) c... 46 0.041
gb|C97601.1|C97601 C97601 Rice callus Oryza sativa (japonic... 44 0.16
gb|AU077934.1|AU077934 AU077934 Rice callus Oryza sativa (j... 44 0.16
gb|AU092340.1|AU092340 AU092340 Rice callus Oryza sativa (j... 44 0.16
gb|AU162033.1|AU162033 AU162033 Rice cDNA from young root O... 44 0.16
gb|AU162036.1|AU162036 AU162036 Rice cDNA from young root O... 44 0.16
gb|AU166474.1|AU166474 AU166474 Rice callus (2001) Oryza sa... 44 0.16
gb|AU183565.1|AU183565 AU183565 Rice callus (2001) Oryza sa... 44 0.16
gb|CA754132.1|CA754132 BR040009000_PLATE_H04_32_042.ab1 OA ... 44 0.16
gb|CB647449.1|CB647449 OSJNEb10G04.r OSJNEb Oryza sativa (j... 44 0.16
gb|CB683255.1|CB683255 OSJNEf11G13.r OSJNEf Oryza sativa (j... 44 0.16
emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC O... 44 0.16
gb|AC130605.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
dbj|AP004037.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
ref|NT_107075.1| Oryza sativa (japonica cultivar-group) 44 0.16
ref|NT_107148.1| Oryza sativa (japonica cultivar-group) 44 0.16
gb|AC113332.2| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|AC108500.3| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|AACV01012356.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01012493.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01020393.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01024705.1| Oryza sativa (japonica cultivar-group) c... 44 0.16
gb|AACV01027990.1| Oryza sativa (japonica cultivar-group) C... 44 0.16
ref|NT_107181.1| Oryza sativa (japonica cultivar-group) 44 0.16
ref|NT_107213.1| Oryza sativa (japonica cultivar-group) 44 0.16
ref|NT_107214.1| Oryza sativa (japonica cultivar-group) 44 0.16
dbj|AP006173.3| Oryza sativa (japonica cultivar-group) geno... 44 0.16
gb|CH401275.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CH401206.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
gb|CM000149.1| Oryza sativa (japonica cultivar-group) chrom... 44 0.16
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 44 0.16
>gb|CB641553.1|CB641553 OSJNEb01E04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01E04 3', mRNA sequence
Length = 770
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 284 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 343
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 344 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 403
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 404 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 463
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 464 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 523
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 524 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 583
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 584 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 634
Score = 97.6 bits (49), Expect = 1e-017
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 710 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 769
Query: 751 t 751
|
Sbjct: 770 t 770
>gb|CB641634.1|CB641634 OSJNEb01G03.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01G03 3', mRNA sequence
Length = 705
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 284 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 343
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 344 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 403
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 404 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 463
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 464 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 523
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 524 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 583
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 584 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 634
>gb|CB644001.1|CB644001 OSJNEb05A05.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05A05 3', mRNA sequence
Length = 700
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 288 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 347
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 348 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 407
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 408 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 467
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 468 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 527
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 528 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 587
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 588 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 638
>gb|CB647610.1|CB647610 OSJNEb10J18.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10J18 3', mRNA sequence
Length = 756
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 207 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 266
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 267 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 326
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 327 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 386
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 387 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 446
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 447 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 506
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 507 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 557
Score = 135 bits (68), Expect = 6e-029
Identities = 97/106 (91%), Gaps = 3/106 (2%)
Strand = Plus / Plus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 633 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 692
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcg 793
|| || ||||||||||||||| || |||||||||||||||||||
Sbjct: 693 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcg 738
>gb|CB648468.1|CB648468 OSJNEb11N19.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11N19 3', mRNA sequence
Length = 769
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 318 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 377
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 378 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 437
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 438 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 497
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 498 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 557
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 558 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 617
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 618 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 668
Score = 58.0 bits (29), Expect = 1e-005
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 688 accccgccgtgcttggcgatgtactggaa 716
|||||||||||||||||||||||||||||
Sbjct: 741 accccgccgtgcttggcgatgtactggaa 769
>gb|CB649610.1|CB649610 OSJNEb13K08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13K08 3', mRNA sequence
Length = 779
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 330 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 389
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 390 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 449
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 450 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 509
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 510 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 569
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 570 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 629
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 630 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 680
Score = 48.1 bits (24), Expect = 0.010
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 691 ccgccgtgcttggcgatgtactgg 714
||||||||||||||||||||||||
Sbjct: 756 ccgccgtgcttggcgatgtactgg 779
>gb|CB650806.1|CB650806 OSJNEb15H11.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15H11 3', mRNA sequence
Length = 779
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 284 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 343
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 344 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 403
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 404 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 463
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 464 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 523
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 524 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 583
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 584 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 634
Score = 93.7 bits (47), Expect = 2e-016
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||
Sbjct: 710 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcccagccggcg 769
Query: 751 ttg 753
|||
Sbjct: 770 ttg 772
>dbj|AK072235.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001J24, full
insert sequence
Length = 1437
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1154 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 1095
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 1094 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 1035
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 1034 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 975
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 974 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 915
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 914 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 855
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 854 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 804
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 728 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 669
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 668 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 609
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 608 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 549
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 548 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 489
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 488 ggcaggtcgcgggcgccggcgtacatgaa 460
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 438 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 379
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 378 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 319
Query: 1110 ctcg 1113
||||
Sbjct: 318 ctcg 315
>dbj|AK099308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144C09, full
insert sequence
Length = 1437
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1154 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 1095
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 1094 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 1035
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 1034 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 975
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 974 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 915
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 914 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 855
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 854 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 804
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 728 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 669
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 668 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 609
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 608 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 549
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 548 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 489
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 488 ggcaggtcgcgggcgccggcgtacatgaa 460
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 438 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 379
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 378 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 319
Query: 1110 ctcg 1113
||||
Sbjct: 318 ctcg 315
>dbj|AK105612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B06, full
insert sequence
Length = 1351
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1068 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 1009
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 1008 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 949
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 948 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 889
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 888 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 829
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 828 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 769
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 768 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 718
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 642 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 583
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 582 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 523
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 522 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 463
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 462 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 403
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 402 ggcaggtcgcgggcgccggcgtacatgaa 374
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 352 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 293
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 292 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 233
Query: 1110 ctcg 1113
||||
Sbjct: 232 ctcg 229
>dbj|AP003928.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1150_A11
Length = 142010
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 77130 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 77071
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 77070 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 77011
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 77010 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 76951
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 76950 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 76891
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 76890 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 76831
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 76830 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 76780
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 76704 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 76645
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 76644 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 76585
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 76584 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 76525
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 76524 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 76465
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 76464 ggcaggtcgcgggcgccggcgtacatgaa 76436
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 76414 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 76355
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 76354 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 76295
Query: 1110 ctcg 1113
||||
Sbjct: 76294 ctcg 76291
>gb|AACV01018980.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg018980, whole
genome shotgun sequence
Length = 34154
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 6995 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 7054
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 7055 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 7114
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 7115 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 7174
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 7175 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 7234
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 7235 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 7294
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 7295 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 7345
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Plus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 7421 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 7480
Query: 751 ttggc---cttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
||| | ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 7481 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 7540
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 7541 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 7600
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 7601 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 7660
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 7661 ggcaggtcgcgggcgccggcgtacatgaa 7689
Score = 133 bits (67), Expect = 2e-028
Identities = 70/71 (98%)
Strand = Plus / Plus
Query: 1043 actcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 7765 actcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggc 7824
Query: 1103 ggttgaactcg 1113
|||||||||||
Sbjct: 7825 ggttgaactcg 7835
>ref|XM_483741.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1437
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1154 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 1095
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 1094 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 1035
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 1034 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 975
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 974 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 915
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 914 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 855
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 854 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 804
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 728 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 669
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 668 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 609
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 608 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 549
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 548 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 489
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 488 ggcaggtcgcgggcgccggcgtacatgaa 460
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 438 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 379
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 378 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 319
Query: 1110 ctcg 1113
||||
Sbjct: 318 ctcg 315
>ref|XM_507329.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1150_A11.17 mRNA
Length = 1437
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 1154 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 1095
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 1094 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 1035
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 1034 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 975
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 974 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 915
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 914 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 855
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 854 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 804
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 728 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 669
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 668 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 609
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 608 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 549
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 548 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 489
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 488 ggcaggtcgcgggcgccggcgtacatgaa 460
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 438 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 379
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 378 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 319
Query: 1110 ctcg 1113
||||
Sbjct: 318 ctcg 315
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 27630965 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 27630906
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 27630905 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 27630846
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 27630845 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 27630786
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 27630785 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 27630726
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 27630725 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 27630666
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 27630665 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 27630615
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 27630539 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 27630480
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 27630479 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 27630420
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 27630419 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 27630360
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 27630359 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 27630300
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 27630299 ggcaggtcgcgggcgccggcgtacatgaa 27630271
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 27630249 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 27630190
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 27630189 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 27630130
Query: 1110 ctcg 1113
||||
Sbjct: 27630129 ctcg 27630126
>gb|CH401230.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000067 genomic
scaffold, whole genome shotgun sequence
Length = 19501165
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 18981757 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 18981698
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 18981697 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 18981638
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 18981637 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 18981578
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 18981577 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 18981518
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 18981517 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 18981458
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 18981457 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 18981407
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 18981331 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 18981272
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 18981271 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 18981212
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 18981211 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 18981152
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 18981151 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 18981092
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 18981091 ggcaggtcgcgggcgccggcgtacatgaa 18981063
Score = 133 bits (67), Expect = 2e-028
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 1043 actcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 18980987 actcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggc 18980928
Query: 1103 ggttgaactcg 1113
|||||||||||
Sbjct: 18980927 ggttgaactcg 18980917
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 26583763 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 26583704
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 26583703 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 26583644
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 26583643 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 26583584
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 26583583 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 26583524
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 26583523 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 26583464
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 26583463 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 26583413
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 26583337 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 26583278
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 26583277 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 26583218
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 26583217 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 26583158
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 26583157 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 26583098
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 26583097 ggcaggtcgcgggcgccggcgtacatgaa 26583069
Score = 133 bits (67), Expect = 2e-028
Identities = 70/71 (98%)
Strand = Plus / Minus
Query: 1043 actcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggc 1102
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 26582993 actcgtcggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggc 26582934
Query: 1103 ggttgaactcg 1113
|||||||||||
Sbjct: 26582933 ggttgaactcg 26582923
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 339 bits (171), Expect = 2e-090
Identities = 306/351 (87%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 27869052 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 27868993
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 27868992 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 27868933
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 27868932 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgcc 27868873
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 27868872 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 27868813
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 27868812 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 27868753
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 27868752 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 27868702
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 27868626 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 27868567
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 27868566 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 27868507
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 27868506 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 27868447
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 27868446 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 27868387
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 27868386 ggcaggtcgcgggcgccggcgtacatgaa 27868358
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 27868336 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 27868277
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 27868276 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 27868217
Query: 1110 ctcg 1113
||||
Sbjct: 27868216 ctcg 27868213
>gb|CB649732.1|CB649732 OSJNEb13N08.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13N08 3', mRNA sequence
Length = 738
Score = 331 bits (167), Expect = 5e-088
Identities = 305/351 (86%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 329 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 388
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 389 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 448
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || ||||| || ||||||||
Sbjct: 449 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtaacccaccgccgcc 508
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactgg 510
||||| ||||| |||||||||||||| | |||| ||| |||||||| ||||||||||||
Sbjct: 509 acgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactgg 568
Query: 511 aagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttcttg 570
||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 569 aagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttcttc 628
Query: 571 agcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 629 agcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 679
>gb|AU057730.1|AU057730 AU057730 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21734_1A, mRNA sequence
Length = 692
Score = 325 bits (164), Expect = 3e-086
Identities = 306/352 (86%), Gaps = 1/352 (0%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgcc-gcagtgtccctc 329
||||| ||||||||||||| |||||||||||| |||||||||||||| |||| |||||||
Sbjct: 454 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgcccgcagagtccctc 395
Query: 330 cttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggcccca 389
|||||||| |||||||||| ||| |||||||| |||||||| ||||| || | ||||||
Sbjct: 394 cttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgcccca 335
Query: 390 cgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgc 449
||||||| |||| | ||||||||||||||||||| | || |||||||| ||||||||
Sbjct: 334 cgagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaccgccgc 275
Query: 450 gacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaactg 509
||||| ||||| |||||||||||||| | |||| ||| |||||||| |||||||||||
Sbjct: 274 cacgccatggtcgagctccgtcccgcatttcccggcgaacaccccctccgagtagaactg 215
Query: 510 gaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgccttctt 569
|||||||||||| | |||||||| || || ||||| ||||||| |||||||||||||||
Sbjct: 214 gaagtgcgagccccccgcctcgatcgccaccgacaccggctggttcgccaccgccttctt 155
Query: 570 gagcgccgactcgtcgttggccggcacgtcctcgtagccgtcgatggtgacg 621
||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 154 cagcgccgactccgagttcgccggcacgtcctcgtagccgtcgatggtgacg 103
>gb|CB641552.1|CB641552 OSJNEb01E04.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01E04 5', mRNA sequence
Length = 736
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 700 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 641
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 640 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 581
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 580 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 521
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 520 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 461
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 460 ggcaggtcgcgggcgccggcgtacatgaa 432
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 410 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 351
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 350 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 291
Query: 1110 ctcg 1113
||||
Sbjct: 290 ctcg 287
>gb|CB641633.1|CB641633 OSJNEb01G03.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb01G03 5', mRNA sequence
Length = 740
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 700 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 641
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 640 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 581
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 580 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 521
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 520 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 461
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 460 ggcaggtcgcgggcgccggcgtacatgaa 432
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 410 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 351
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 350 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 291
Query: 1110 ctcg 1113
||||
Sbjct: 290 ctcg 287
>gb|CB644000.1|CB644000 OSJNEb05A05.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05A05 5', mRNA sequence
Length = 777
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 712 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 653
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 652 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 593
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 592 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 533
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 532 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 473
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 472 ggcaggtcgcgggcgccggcgtacatgaa 444
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 422 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 363
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 362 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 303
Query: 1110 ctcg 1113
||||
Sbjct: 302 ctcg 299
>gb|CB648467.1|CB648467 OSJNEb11N19.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11N19 5', mRNA sequence
Length = 748
Score = 212 bits (107), Expect = 3e-052
Identities = 229/269 (85%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 712 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 653
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 652 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 593
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 592 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 533
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 532 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 473
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 472 ggcaggtcgcgggcgccggcgtacatgaa 444
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 422 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 363
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 362 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 303
Query: 1110 ctcg 1113
||||
Sbjct: 302 ctcg 299
>gb|CB647609.1|CB647609 OSJNEb10J18.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb10J18 5', mRNA sequence
Length = 747
Score = 204 bits (103), Expect = 7e-050
Identities = 228/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 708 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 649
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || ||||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 648 ttgccggtcttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 589
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 588 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 529
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||| ||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 528 cactggccgtggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 469
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 468 ggcaggtcgcgggcgccggcgtacatgaa 440
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 418 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 359
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 358 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 299
Query: 1110 ctcg 1113
||||
Sbjct: 298 ctcg 295
>gb|CB649731.1|CB649731 OSJNEb13N08.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb13N08 5', mRNA sequence
Length = 782
Score = 188 bits (95), Expect = 4e-045
Identities = 226/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||
Sbjct: 712 ccgccgtgcttggcgatgtactggaacgcgttgtccatgaggccgccgtcgcagccggcg 653
Query: 751 tt---ggccttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
|| || |||||||||||||| || ||||||||||| ||||||| || ||||| ||
Sbjct: 652 ttgccggtcttggtgtcgcagtggacgagctgctgctcagacagcgcggtgaggttgctg 593
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 592 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 533
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||| ||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 532 cactggccgtggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 473
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 472 ggcaggtcgcgggcgccggcgtacatgaa 444
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 422 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 363
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 362 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 303
Query: 1110 ctcg 1113
||||
Sbjct: 302 ctcg 299
>gb|CB650805.1|CB650805 OSJNEb15H11.f OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb15H11 5', mRNA sequence
Length = 633
Score = 188 bits (95), Expect = 4e-045
Identities = 226/269 (84%), Gaps = 3/269 (1%)
Strand = Plus / Minus
Query: 691 ccgccgtgcttggcgatgtactggaacgcgtagtccatgaggcccccgttgcagccggcg 750
|||||||||||||||||||||||| |||||| |||||||||||| |||| ||||||| ||
Sbjct: 626 ccgccgtgcttggcgatgtactggtacgcgttgtccatgaggccgccgtcgcagccgtcg 567
Query: 751 ttggcc---ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcaggttcttg 807
||| | |||||||||||||| || ||||||||||||||||||| || ||||| ||
Sbjct: 566 ttgccggttttggtgtcgcagtcgacgagctgctgctccgacagcgcggtgaggttgctg 507
Query: 808 gtcttgatcgcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccg 867
|| ||| |||||||| || |||||||||||||| |||||||||||||||||||| |||
Sbjct: 506 gtgcggatggcgttgatcccttccacggcggcgatggtcgagaacgcccagcagctgccg 447
Query: 868 cattggccctggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggcc 927
|| ||||||||||||||||| | ||| |||||||||| | |||||| || | |||
Sbjct: 446 cactggccctggtccttgaccgccccgacggcgcccttctcgcgccagtccaccgccgcc 387
Query: 928 gggacgtcgcgcgcgtcggcgtacatgaa 956
|| | |||||| ||| |||||||||||||
Sbjct: 386 ggcaggtcgcgggcgccggcgtacatgaa 358
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 336 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 277
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 276 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 217
Query: 1110 ctcg 1113
||||
Sbjct: 216 ctcg 213
>gb|AU057731.1|AU057731 AU057731 Oryza sativa mature leaf Nipponbare Oryza sativa (japonica
cultivar-group) cDNA clone S21734_2Z, mRNA sequence
Length = 689
Score = 180 bits (91), Expect = 1e-042
Identities = 199/236 (84%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 391 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 332
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 331 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 272
Query: 391 gagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgaccgccgcg 450
|||||| |||| | ||||||||||||||||||| | || |||||||| | |||||
Sbjct: 271 gagttcctgacgatccagtacttggtgccgtccaccgtcgtgccgtagcccaacgccggn 212
Query: 451 acgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagtagaa 506
| ||| ||||| |||||||||||| | | |||| ||| | |||||| ||||||||
Sbjct: 211 aagccatggtcgagctccgtcccggatttnccggngaaaaacccctccgagtagaa 156
>gb|AU070491.1|AU070491 AU070491 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S16749_3A, mRNA sequence
Length = 426
Score = 176 bits (89), Expect = 2e-041
Identities = 137/153 (89%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 207 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 148
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 147 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 88
Query: 391 gagttcttgaccagccagtacttggtgccgtcc 423
|||||| |||| | |||||||||||||||||||
Sbjct: 87 gagttcctgacgatccagtacttggtgccgtcc 55
>gb|AU070651.1|AU070651 AU070651 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10014_1A, mRNA sequence
Length = 484
Score = 176 bits (89), Expect = 2e-041
Identities = 137/153 (89%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 195 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 136
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 135 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 76
Query: 391 gagttcttgaccagccagtacttggtgccgtcc 423
|||||| |||| | |||||||||||||||||||
Sbjct: 75 gagttcctgacgatccagtacttggtgccgtcc 43
>gb|AU108194.1|AU108194 AU108194 Rice cDNA from young root Oryza sativa (japonica
cultivar-group) cDNA clone R10014, mRNA sequence
Length = 479
Score = 176 bits (89), Expect = 2e-041
Identities = 137/153 (89%)
Strand = Plus / Minus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 175 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 116
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 115 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 56
Query: 391 gagttcttgaccagccagtacttggtgccgtcc 423
|||||| |||| | |||||||||||||||||||
Sbjct: 55 gagttcctgacgatccagtacttggtgccgtcc 23
>gb|CV723743.1|CV723743 root--04-K05.g1 Rice root lambda phage cDNA library (root) Oryza
sativa (japonica cultivar-group) cDNA clone
root--04-K05, mRNA sequence
Length = 365
Score = 176 bits (89), Expect = 2e-041
Identities = 137/153 (89%)
Strand = Plus / Plus
Query: 271 gggttgggcgaggtcttgacggggtaggatgcctccatggcgatgccgcagtgtccctcc 330
||||| ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||
Sbjct: 204 gggttcggcgaggtcttgatggggtaggatgcttccatggcgatgccgcagagtccctcc 263
Query: 331 ttggcggccacgtcgcgcgccatgcggatgtaccccttctcgccccactcggggccccac 390
||||||| |||||||||| ||| |||||||| |||||||| ||||| || | |||||||
Sbjct: 264 ttggcggacacgtcgcgcttcatccggatgtagcccttctcaccccagtctgcgccccac 323
Query: 391 gagttcttgaccagccagtacttggtgccgtcc 423
|||||| |||| | |||||||||||||||||||
Sbjct: 324 gagttcctgacgatccagtacttggtgccgtcc 356
>gb|CA756361.1|CA756361 BR030040000_PLATE_H07_56_063.ab1 OA Oryza sativa (japonica
cultivar-group) cDNA clone
BR030040000_PLATE_H07_56_063.ab1 similar to NP_568722.1|
(NM_124405) cysteine proteinase [Arabidopsis thaliana]
gi|9759028|dbj|BAB09397.1| (AB024031) cysteine
endopeptidase [Arabidopsis thaliana]
gi|20258850|gb|AAM13907.1| (AY091087) putative cysteine
proteinase [Arabidopsis thaliana], mRNA sequence
Length = 599
Score = 159 bits (80), Expect = 4e-036
Identities = 113/124 (91%)
Strand = Plus / Minus
Query: 990 gccgcggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtc 1049
||||||||||||||||||||| | ||| | |||| |||||| ||| |||||||||||
Sbjct: 422 gccgcggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtc 363
Query: 1050 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaa 1109
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 362 ggcggtcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaa 303
Query: 1110 ctcg 1113
||||
Sbjct: 302 ctcg 299
Score = 87.7 bits (44), Expect = 1e-014
Identities = 116/140 (82%)
Strand = Plus / Minus
Query: 817 gcgttgatgccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccc 876
|||||||| || ||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct: 583 gcgttgatccctcccacggcggcgatggtcgagaacgcccagcagctgccgcactggccc 524
Query: 877 tggtccttgacgtcggtgacagcgcccttctgcctccagtcgacggaggccgggacgtcg 936
||||||| ||| | ||| |||||||||| | |||||| || | ||||| | ||||
Sbjct: 523 tggtcctggaccgccccgacggcgcccttctcgcgccagtccaccgccgccggcaggtcg 464
Query: 937 cgcgcgtcggcgtacatgaa 956
|| ||| |||||||||||||
Sbjct: 463 cgggcgccggcgtacatgaa 444
>gb|AU078668.1|AU078668 AU078668 Rice panicle at ripening stage Oryza sativa (japonica
cultivar-group) cDNA clone E11649_4Z, mRNA sequence
Length = 401
Score = 149 bits (75), Expect = 4e-033
Identities = 108/119 (90%)
Strand = Plus / Minus
Query: 995 ggaacatgcggtggtgcgcgaccctggagcccgcgtagtggcgtcggaactcgtcggcgg 1054
|||||||||||||||| | ||| | |||| |||||| ||| ||||||||||||||||
Sbjct: 401 ggaacatgcggtggtgggagacgcgggaggaggcgtaggcgcggcggaactcgtcggcgg 342
Query: 1055 tcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcccggcggttgaactcg 1113
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 341 tcatgtcgccgaagcggttgaggcggagcttgtagggctcgtcgcggcggttgaactcg 283
>dbj|AK059528.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-D05, full
insert sequence
Length = 1332
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 679 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 620
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 619 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 560
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 559 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 500
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 499 gcccccttcttcctccagtc 480
>dbj|AK105881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D02, full
insert sequence
Length = 1519
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 679 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 620
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 619 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 560
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 559 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 500
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 499 gcccccttcttcctccagtc 480
>dbj|AK106011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-B02, full
insert sequence
Length = 1377
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 679 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 620
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 619 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 560
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 559 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 500
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 499 gcccccttcttcctccagtc 480
>dbj|AK119182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-H03, full
insert sequence
Length = 1377
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 679 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 620
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 619 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 560
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 559 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 500
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 499 gcccccttcttcctccagtc 480
>gb|AACV01003113.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg003113, whole
genome shotgun sequence
Length = 38240
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Plus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 31589 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 31648
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 31649 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 31708
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 31709 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 31768
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 31769 gcccccttcttcctccagtc 31788
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 42929363 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 42929304
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 42929303 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 42929244
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 42929243 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 42929184
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 42929183 gcccccttcttcctccagtc 42929164
Score = 109 bits (55), Expect = 3e-021
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 384 gccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgac 443
|||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||
Sbjct: 39576367 gccccacgagttcttgacgatccagtactccgtgccgtcgttggtctcgccgtagccgac 39576308
Query: 444 cgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagta 503
| |||||||||||||||| || || || ||||| ||||| |||||| || ||||||||
Sbjct: 39576307 caccgcgacgccgtggtcgaggtcggtgccgcagtcgccggcgaagacgccgtcggagta 39576248
Query: 504 gaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgc 563
|||||||||| | | ||| ||| |||||||||||||| |||||||||| || || ||
Sbjct: 39576247 gaactggaaggactggtcgccggcgtcgatggcgacggagacgggctggttggcgacggc 39576188
Query: 564 cttcttgagcgccgactcgtcgttggccggcacgt 598
||| |||||| | |||| ||||||||||||||
Sbjct: 39576187 cttggcgagcgcggcctcgctgttggccggcacgt 39576153
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||| |||||||| |||||||| || || | ||||||| |||| || |||||
Sbjct: 39576037 gatgtactcgaacgcgttctccatgagcccgccctggcagccgctgttgtccgccgtgtc 39575978
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||| | ||||| |||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 39575977 gcagtcgatcagctcctgctccgacagcgacaccagccgccccgtccggatcgcgttgat 39575918
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||||| | | ||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 39575917 gccctccacggacaccaccgtggagaacgcccagcagctgccgcacttgccctggtcctt 39575858
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacgg 922
|||| ||||||| |||||||| | | |||||||||||
Sbjct: 39575857 gacgccggtgaccgcgcccttgcggcgccagtcgacgg 39575820
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
|||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 13829137 ttggtgtcgcagtccaccagctcctgctccgacagcggcgtcag 13829180
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
|||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 13823684 ttggtgtcgcagtccaccagctcctgctccgacagcggcgtcag 13823641
Score = 61.9 bits (31), Expect = 7e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 873 gccctggtccttgacgtcggtgacagcgcccttctgcctccagtcga 919
||||||||||||||| |||||||| |||||||| | |||||||||||
Sbjct: 6393654 gccctggtccttgacatcggtgacggcgcccttgtacctccagtcga 6393700
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
|||||||||||||||||||| ||||||||| |||| ||||||
Sbjct: 6393445 ggtgtcgcagtccaccagctcctgctccgatagcggcgtcag 6393486
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 285 cttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||| || ||||||||||||||||||
Sbjct: 39576466 cttgacggggtaggaggcttccatggcgatgccgcag 39576430
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 764 cgcagtccaccagctgctgctccgacagcgacgtcag 800
||||||||||||||| |||||||||||||| ||||||
Sbjct: 12726927 cgcagtccaccagctcctgctccgacagcggcgtcag 12726963
Score = 56.0 bits (28), Expect = 4e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 352 atgcggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagtac 411
||||| ||||| || ||||| ||||| |||| | ||||||||||||||| ||||||||||
Sbjct: 24426414 atgcgcatgtagccgttctccccccagtcggtggcccacgagttcttgagcagccagtac 24426473
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 873 gccctggtccttgacgtcggtgacagcgcccttctgcctccagtcga 919
|||||||||||||||| ||||||| |||||||| |||||||||||
Sbjct: 12727125 gccctggtccttgacgccggtgacggcgcccttgaacctccagtcga 12727171
Score = 52.0 bits (26), Expect = 7e-004
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 356 ggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagtactt 413
||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 6393006 ggatgtatcccttctcgccccacgtcttgccccacgagttcttggccacccagtactt 6393063
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 13840615 ggtgtcgcagtccaccatcacctgctccgacagcgac 13840579
Score = 50.1 bits (25), Expect = 0.003
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 385 ccccacgagttcttgaccagccagtactt 413
||||||||||||||| |||||||||||||
Sbjct: 13828756 ccccacgagttcttggccagccagtactt 13828784
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 13819248 ggtgtcgcagtccaccatcacctgctccgacagcgac 13819284
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 12733337 ggtgtcgcagtccaccatcacctgctccgacagcgac 12733301
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 6398362 ggtgtcgcagtccaccatcacctgctccgacagcgac 6398326
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1056 catgtcgccgaagcggttgaggcggag 1082
||||||||||||||||||||| |||||
Sbjct: 39575698 catgtcgccgaagcggttgagccggag 39575672
Score = 46.1 bits (23), Expect = 0.041
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 364 cccttctcgccccactcggggccccacgagttcttgaccagccagtacttg 414
|||| ||||||||| ||| |||||||||||||||| | | ||||||||||
Sbjct: 6398766 ccctgctcgccccagtcgctgccccacgagttcttggcgatccagtacttg 6398716
>ref|NM_189456.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1098
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 629 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 570
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 569 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 510
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 509 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 450
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 449 gcccccttcttcctccagtc 430
>ref|NT_079923.2| Oryza sativa (japonica cultivar-group)
Length = 2970704
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 2557657 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 2557598
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 2557597 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 2557538
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 2557537 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 2557478
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 2557477 gcccccttcttcctccagtc 2557458
>dbj|AP003277.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0518C01
Length = 173555
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 42427 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 42368
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 42367 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 42308
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 42307 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 42248
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 42247 gcccccttcttcctccagtc 42228
>gb|CH401168.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000005 genomic
scaffold, whole genome shotgun sequence
Length = 17394610
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 17015913 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 17015854
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 17015853 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 17015794
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 17015793 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 17015734
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 17015733 gcccccttcttcctccagtc 17015714
Score = 109 bits (55), Expect = 3e-021
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 384 gccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgac 443
|||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||
Sbjct: 13766535 gccccacgagttcttgacgatccagtactccgtgccgtcgttggtctcgccgtagccgac 13766476
Query: 444 cgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagta 503
| |||||||||||||||| || || || ||||| ||||| |||||| || ||||||||
Sbjct: 13766475 caccgcgacgccgtggtcgaggtcggtgccgcagtcgccggcgaagacgccgtcggagta 13766416
Query: 504 gaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgc 563
|||||||||| | | ||| ||| |||||||||||||| |||||||||| || || ||
Sbjct: 13766415 gaactggaaggactggtcgccggcgtcgatggcgacggagacgggctggttggcgacggc 13766356
Query: 564 cttcttgagcgccgactcgtcgttggccggcacgt 598
||| |||||| | |||| ||||||||||||||
Sbjct: 13766355 cttggcgagcgcggcctcgctgttggccggcacgt 13766321
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||| |||||||| |||||||| || || | ||||||| |||| || |||||
Sbjct: 13766205 gatgtactcgaacgcgttctccatgagcccgccctggcagccgctgttgtccgccgtgtc 13766146
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||| | ||||| |||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 13766145 gcagtcgatcagctcctgctccgacagcgacaccagccgccccgtccggatcgcgttgat 13766086
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||||| | | ||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 13766085 gccctccacggacaccaccgtggagaacgcccagcagctgccgcacttgccctggtcctt 13766026
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacgg 922
|||| ||||||| |||||||| | | |||||||||||
Sbjct: 13766025 gacgccggtgaccgcgcccttgcggcgccagtcgacgg 13765988
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 285 cttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||| || ||||||||||||||||||
Sbjct: 13766634 cttgacggggtaggaggcttccatggcgatgccgcag 13766598
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1056 catgtcgccgaagcggttgaggcggag 1082
||||||||||||||||||||| |||||
Sbjct: 13765866 catgtcgccgaagcggttgagccggag 13765840
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 42217634 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 42217575
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 42217574 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 42217515
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 42217514 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 42217455
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 42217454 gcccccttcttcctccagtc 42217435
Score = 109 bits (55), Expect = 3e-021
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 384 gccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgac 443
|||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||
Sbjct: 38968256 gccccacgagttcttgacgatccagtactccgtgccgtcgttggtctcgccgtagccgac 38968197
Query: 444 cgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagta 503
| |||||||||||||||| || || || ||||| ||||| |||||| || ||||||||
Sbjct: 38968196 caccgcgacgccgtggtcgaggtcggtgccgcagtcgccggcgaagacgccgtcggagta 38968137
Query: 504 gaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgc 563
|||||||||| | | ||| ||| |||||||||||||| |||||||||| || || ||
Sbjct: 38968136 gaactggaaggactggtcgccggcgtcgatggcgacggagacgggctggttggcgacggc 38968077
Query: 564 cttcttgagcgccgactcgtcgttggccggcacgt 598
||| |||||| | |||| ||||||||||||||
Sbjct: 38968076 cttggcgagcgcggcctcgctgttggccggcacgt 38968042
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||| |||||||| |||||||| || || | ||||||| |||| || |||||
Sbjct: 38967926 gatgtactcgaacgcgttctccatgagcccgccctggcagccgctgttgtccgccgtgtc 38967867
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||| | ||||| |||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 38967866 gcagtcgatcagctcctgctccgacagcgacaccagccgccccgtccggatcgcgttgat 38967807
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||||| | | ||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 38967806 gccctccacggacaccaccgtggagaacgcccagcagctgccgcacttgccctggtcctt 38967747
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacgg 922
|||| ||||||| |||||||| | | |||||||||||
Sbjct: 38967746 gacgccggtgaccgcgcccttgcggcgccagtcgacgg 38967709
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
|||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 13805594 ttggtgtcgcagtccaccagctcctgctccgacagcggcgtcag 13805637
Score = 61.9 bits (31), Expect = 7e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 873 gccctggtccttgacgtcggtgacagcgcccttctgcctccagtcga 919
||||||||||||||| |||||||| |||||||| | |||||||||||
Sbjct: 6459564 gccctggtccttgacatcggtgacggcgcccttgtacctccagtcga 6459610
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
|||||||||||||||||||| ||||||||| |||| ||||||
Sbjct: 6459355 ggtgtcgcagtccaccagctcctgctccgatagcggcgtcag 6459396
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 285 cttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||| || ||||||||||||||||||
Sbjct: 38968355 cttgacggggtaggaggcttccatggcgatgccgcag 38968319
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 764 cgcagtccaccagctgctgctccgacagcgacgtcag 800
||||||||||||||| |||||||||||||| ||||||
Sbjct: 12684864 cgcagtccaccagctcctgctccgacagcggcgtcag 12684900
Score = 56.0 bits (28), Expect = 4e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 352 atgcggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagtac 411
||||| ||||| || ||||| ||||| |||| | ||||||||||||||| ||||||||||
Sbjct: 23923571 atgcgcatgtagccgttctccccccagtcggtggcccacgagttcttgagcagccagtac 23923630
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 873 gccctggtccttgacgtcggtgacagcgcccttctgcctccagtcga 919
|||||||||||||||| ||||||| |||||||| |||||||||||
Sbjct: 12685062 gccctggtccttgacgccggtgacggcgcccttgaacctccagtcga 12685108
Score = 52.0 bits (26), Expect = 7e-004
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 356 ggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagtactt 413
||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 6458916 ggatgtatcccttctcgccccacgtcttgccccacgagttcttggccacccagtactt 6458973
Score = 50.1 bits (25), Expect = 0.003
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 385 ccccacgagttcttgaccagccagtactt 413
||||||||||||||| |||||||||||||
Sbjct: 13805213 ccccacgagttcttggccagccagtactt 13805241
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 13792266 ggtgtcgcagtccaccatcacctgctccgacagcgac 13792230
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 12691274 ggtgtcgcagtccaccatcacctgctccgacagcgac 12691238
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 6464272 ggtgtcgcagtccaccatcacctgctccgacagcgac 6464236
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1056 catgtcgccgaagcggttgaggcggag 1082
||||||||||||||||||||| |||||
Sbjct: 38967587 catgtcgccgaagcggttgagccggag 38967561
Score = 46.1 bits (23), Expect = 0.041
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 364 cccttctcgccccactcggggccccacgagttcttgaccagccagtacttg 414
|||| ||||||||| ||| |||||||||||||||| | | ||||||||||
Sbjct: 6464676 ccctgctcgccccagtcgctgccccacgagttcttggcgatccagtacttg 6464626
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 111 bits (56), Expect = 8e-022
Identities = 164/200 (82%)
Strand = Plus / Minus
Query: 718 gcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtcgcagtccaccagc 777
||||||||||||||||| ||| |||||||| |||| | | |||||||||||| | |||
Sbjct: 42848693 gcgtagtccatgaggccgccgctgcagccgttgttgccgtcggtgtcgcagtcgatgagc 42848634
Query: 778 tgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgatgccctccacggcg 837
| |||||||||||| ||||||||| |||| ||| |||||||| |||||||| ||
Sbjct: 42848633 tcctgctccgacaggcgcgtcaggttgccggtcacgatggcgttgatcccctccaccgcc 42848574
Query: 838 gcgatcgtcgagaacgcccagcagctaccgcattggccctggtccttgacgtcggtgaca 897
|| | ||||||||||||||||||||| ||||| || ||||||| ||| || || || ||
Sbjct: 42848573 gccaccgtcgagaacgcccagcagctgccgcactgcccctggttcttcacctccgtcacc 42848514
Query: 898 gcgcccttctgcctccagtc 917
|| ||||||| |||||||||
Sbjct: 42848513 gcccccttcttcctccagtc 42848494
Score = 109 bits (55), Expect = 3e-021
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 384 gccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgac 443
|||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||
Sbjct: 39495697 gccccacgagttcttgacgatccagtactccgtgccgtcgttggtctcgccgtagccgac 39495638
Query: 444 cgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagta 503
| |||||||||||||||| || || || ||||| ||||| |||||| || ||||||||
Sbjct: 39495637 caccgcgacgccgtggtcgaggtcggtgccgcagtcgccggcgaagacgccgtcggagta 39495578
Query: 504 gaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgc 563
|||||||||| | | ||| ||| |||||||||||||| |||||||||| || || ||
Sbjct: 39495577 gaactggaaggactggtcgccggcgtcgatggcgacggagacgggctggttggcgacggc 39495518
Query: 564 cttcttgagcgccgactcgtcgttggccggcacgt 598
||| |||||| | |||| ||||||||||||||
Sbjct: 39495517 cttggcgagcgcggcctcgctgttggccggcacgt 39495483
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||| |||||||| |||||||| || || | ||||||| |||| || |||||
Sbjct: 39495367 gatgtactcgaacgcgttctccatgagcccgccctggcagccgctgttgtccgccgtgtc 39495308
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||| | ||||| |||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 39495307 gcagtcgatcagctcctgctccgacagcgacaccagccgccccgtccggatcgcgttgat 39495248
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||||| | | ||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 39495247 gccctccacggacaccaccgtggagaacgcccagcagctgccgcacttgccctggtcctt 39495188
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacgg 922
|||| ||||||| |||||||| | | |||||||||||
Sbjct: 39495187 gacgccggtgaccgcgcccttgcggcgccagtcgacgg 39495150
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
|||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 13831355 ttggtgtcgcagtccaccagctcctgctccgacagcggcgtcag 13831398
Score = 71.9 bits (36), Expect = 7e-010
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 757 ttggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
|||||||||||||||||||||| |||||||||||||| ||||||
Sbjct: 13825902 ttggtgtcgcagtccaccagctcctgctccgacagcggcgtcag 13825859
Score = 61.9 bits (31), Expect = 7e-007
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 873 gccctggtccttgacgtcggtgacagcgcccttctgcctccagtcga 919
||||||||||||||| |||||||| |||||||| | |||||||||||
Sbjct: 6395872 gccctggtccttgacatcggtgacggcgcccttgtacctccagtcga 6395918
Score = 60.0 bits (30), Expect = 3e-006
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgacgtcag 800
|||||||||||||||||||| ||||||||| |||| ||||||
Sbjct: 6395663 ggtgtcgcagtccaccagctcctgctccgatagcggcgtcag 6395704
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 285 cttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||| || ||||||||||||||||||
Sbjct: 39495796 cttgacggggtaggaggcttccatggcgatgccgcag 39495760
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 764 cgcagtccaccagctgctgctccgacagcgacgtcag 800
||||||||||||||| |||||||||||||| ||||||
Sbjct: 12729145 cgcagtccaccagctcctgctccgacagcggcgtcag 12729181
Score = 56.0 bits (28), Expect = 4e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 352 atgcggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagtac 411
||||| ||||| || ||||| ||||| |||| | ||||||||||||||| ||||||||||
Sbjct: 24347697 atgcgcatgtagccgttctccccccagtcggtggcccacgagttcttgagcagccagtac 24347756
Score = 54.0 bits (27), Expect = 2e-004
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 873 gccctggtccttgacgtcggtgacagcgcccttctgcctccagtcga 919
|||||||||||||||| ||||||| |||||||| |||||||||||
Sbjct: 12729343 gccctggtccttgacgccggtgacggcgcccttgaacctccagtcga 12729389
Score = 52.0 bits (26), Expect = 7e-004
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 356 ggatgtaccccttctcgccccactcggggccccacgagttcttgaccagccagtactt 413
||||||| ||||||||||||||| |||||||||||||||| ||| |||||||||
Sbjct: 6395224 ggatgtatcccttctcgccccacgtcttgccccacgagttcttggccacccagtactt 6395281
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 13842833 ggtgtcgcagtccaccatcacctgctccgacagcgac 13842797
Score = 50.1 bits (25), Expect = 0.003
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 385 ccccacgagttcttgaccagccagtactt 413
||||||||||||||| |||||||||||||
Sbjct: 13830974 ccccacgagttcttggccagccagtactt 13831002
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 13821466 ggtgtcgcagtccaccatcacctgctccgacagcgac 13821502
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 12735555 ggtgtcgcagtccaccatcacctgctccgacagcgac 12735519
Score = 50.1 bits (25), Expect = 0.003
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 759 ggtgtcgcagtccaccagctgctgctccgacagcgac 795
||||||||||||||||| | ||||||||||||||||
Sbjct: 6400580 ggtgtcgcagtccaccatcacctgctccgacagcgac 6400544
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1056 catgtcgccgaagcggttgaggcggag 1082
||||||||||||||||||||| |||||
Sbjct: 39495028 catgtcgccgaagcggttgagccggag 39495002
Score = 46.1 bits (23), Expect = 0.041
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 364 cccttctcgccccactcggggccccacgagttcttgaccagccagtacttg 414
|||| ||||||||| ||| |||||||||||||||| | | ||||||||||
Sbjct: 6400984 ccctgctcgccccagtcgctgccccacgagttcttggcgatccagtacttg 6400934
>dbj|D76415.1| Rice seedling mRNA for cysteine proteinase, complete cds
Length = 1429
Score = 109 bits (55), Expect = 3e-021
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 384 gccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgac 443
|||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||
Sbjct: 970 gccccacgagttcttgacgatccagtactccgtgccgtcgttggtctcgccgtagccgac 911
Query: 444 cgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagta 503
| |||||||||||||||| || || || ||||| ||||| |||||| || ||||||||
Sbjct: 910 caccgcgacgccgtggtcgaggtcggtgccgcagtcgccggcgaagacgccgtcggagta 851
Query: 504 gaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgc 563
|||||||||| | | ||| ||| |||||||||||||| |||||||||| || || ||
Sbjct: 850 gaactggaaggactggtcgccggcgtcgatggcgacggagacgggctggttggcgacggc 791
Query: 564 cttcttgagcgccgactcgtcgttggccggcacgt 598
||| |||||| | |||| ||||||||||||||
Sbjct: 790 cttggcgagcgcggcctcgctgttggccggcacgt 756
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||| |||||||| |||||||| || || | ||||||| |||| || |||||
Sbjct: 643 gatgtactcgaacgcgttctccatgagcccgccctggcagccgctgttgtccgccgtgtc 584
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||| | ||||| |||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 583 gcagtcgatcagctcctgctccgacagcgacaccagccgccccgtccggatcgcgttgat 524
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||||| | | ||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 523 gccctccacggacaccaccgtggagaacgcccagcagctgccgcacttgccctggtcctt 464
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacgg 922
|||| ||||||| |||||||| | | |||||||||||
Sbjct: 463 gacgccggtgaccgcgcccttgcggcgccagtcgacgg 426
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 285 cttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||| || ||||||||||||||||||
Sbjct: 1069 cttgacggggtaggaggcttccatggcgatgccgcag 1033
>gb|AC091089.1|AC091089 Oryza sativa (japonica cultivar-group) chromosome 1 clone P0497A05, ***
SEQUENCING IN PROGRESS ***, 2 ordered pieces
Length = 132928
Score = 109 bits (55), Expect = 3e-021
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 384 gccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgac 443
|||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||
Sbjct: 52114 gccccacgagttcttgacgatccagtactccgtgccgtcgttggtctcgccgtagccgac 52055
Query: 444 cgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagta 503
| |||||||||||||||| || || || ||||| ||||| |||||| || ||||||||
Sbjct: 52054 caccgcgacgccgtggtcgaggtcggtgccgcagtcgccggcgaagacgccgtcggagta 51995
Query: 504 gaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgc 563
|||||||||| | | ||| ||| |||||||||||||| |||||||||| || || ||
Sbjct: 51994 gaactggaaggactggtcgccggcgtcgatggcgacggagacgggctggttggcgacggc 51935
Query: 564 cttcttgagcgccgactcgtcgttggccggcacgt 598
||| |||||| | |||| ||||||||||||||
Sbjct: 51934 cttggcgagcgcggcctcgctgttggccggcacgt 51900
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||| |||||||| |||||||| || || | ||||||| |||| || |||||
Sbjct: 51784 gatgtactcgaacgcgttctccatgagcccgccctggcagccgctgttgtccgccgtgtc 51725
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||| | ||||| |||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 51724 gcagtcgatcagctcctgctccgacagcgacaccagccgccccgtccggatcgcgttgat 51665
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||||| | | ||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 51664 gccctccacggacaccaccgtggagaacgcccagcagctgccgcacttgccctggtcctt 51605
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacgg 922
|||| ||||||| |||||||| | | |||||||||||
Sbjct: 51604 gacgccggtgaccgcgcccttgcggcgccagtcgacgg 51567
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 285 cttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||| || ||||||||||||||||||
Sbjct: 52213 cttgacggggtaggaggcttccatggcgatgccgcag 52177
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1056 catgtcgccgaagcggttgaggcggag 1082
||||||||||||||||||||| |||||
Sbjct: 51445 catgtcgccgaagcggttgagccggag 51419
>dbj|AP003380.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0497A05
Length = 130919
Score = 109 bits (55), Expect = 3e-021
Identities = 175/215 (81%)
Strand = Plus / Minus
Query: 384 gccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgac 443
|||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||
Sbjct: 50139 gccccacgagttcttgacgatccagtactccgtgccgtcgttggtctcgccgtagccgac 50080
Query: 444 cgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagta 503
| |||||||||||||||| || || || ||||| ||||| |||||| || ||||||||
Sbjct: 50079 caccgcgacgccgtggtcgaggtcggtgccgcagtcgccggcgaagacgccgtcggagta 50020
Query: 504 gaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgc 563
|||||||||| | | ||| ||| |||||||||||||| |||||||||| || || ||
Sbjct: 50019 gaactggaaggactggtcgccggcgtcgatggcgacggagacgggctggttggcgacggc 49960
Query: 564 cttcttgagcgccgactcgtcgttggccggcacgt 598
||| |||||| | |||| ||||||||||||||
Sbjct: 49959 cttggcgagcgcggcctcgctgttggccggcacgt 49925
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Minus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||| |||||||| |||||||| || || | ||||||| |||| || |||||
Sbjct: 49809 gatgtactcgaacgcgttctccatgagcccgccctggcagccgctgttgtccgccgtgtc 49750
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||| | ||||| |||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 49749 gcagtcgatcagctcctgctccgacagcgacaccagccgccccgtccggatcgcgttgat 49690
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||||| | | ||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 49689 gccctccacggacaccaccgtggagaacgcccagcagctgccgcacttgccctggtcctt 49630
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacgg 922
|||| ||||||| |||||||| | | |||||||||||
Sbjct: 49629 gacgccggtgaccgcgcccttgcggcgccagtcgacgg 49592
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 285 cttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||| || ||||||||||||||||||
Sbjct: 50238 cttgacggggtaggaggcttccatggcgatgccgcag 50202
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 1056 catgtcgccgaagcggttgaggcggag 1082
||||||||||||||||||||| |||||
Sbjct: 49470 catgtcgccgaagcggttgagccggag 49444
>gb|AACV01002890.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg002890, whole
genome shotgun sequence
Length = 20508
Score = 109 bits (55), Expect = 3e-021
Identities = 175/215 (81%)
Strand = Plus / Plus
Query: 384 gccccacgagttcttgaccagccagtacttggtgccgtccgcggtgaccccgtagccgac 443
|||||||||||||||||| | |||||||| |||||||| ||| | |||||||||||
Sbjct: 9850 gccccacgagttcttgacgatccagtactccgtgccgtcgttggtctcgccgtagccgac 9909
Query: 444 cgccgcgacgccgtggtccagctccgtcccgcacctgccggagaagaccccctcggagta 503
| |||||||||||||||| || || || ||||| ||||| |||||| || ||||||||
Sbjct: 9910 caccgcgacgccgtggtcgaggtcggtgccgcagtcgccggcgaagacgccgtcggagta 9969
Query: 504 gaactggaagtgcgagccgctggcctcgatggcgacggacacgggctggtgcgccaccgc 563
|||||||||| | | ||| ||| |||||||||||||| |||||||||| || || ||
Sbjct: 9970 gaactggaaggactggtcgccggcgtcgatggcgacggagacgggctggttggcgacggc 10029
Query: 564 cttcttgagcgccgactcgtcgttggccggcacgt 598
||| |||||| | |||| ||||||||||||||
Sbjct: 10030 cttggcgagcgcggcctcgctgttggccggcacgt 10064
Score = 107 bits (54), Expect = 1e-020
Identities = 177/218 (81%)
Strand = Plus / Plus
Query: 705 gatgtactggaacgcgtagtccatgaggcccccgttgcagccggcgttggccttggtgtc 764
|||||||| |||||||| |||||||| || || | ||||||| |||| || |||||
Sbjct: 10180 gatgtactcgaacgcgttctccatgagcccgccctggcagccgctgttgtccgccgtgtc 10239
Query: 765 gcagtccaccagctgctgctccgacagcgacgtcaggttcttggtcttgatcgcgttgat 824
|||||| | ||||| |||||||||||||||| ||| | ||| ||||||||||||
Sbjct: 10240 gcagtcgatcagctcctgctccgacagcgacaccagccgccccgtccggatcgcgttgat 10299
Query: 825 gccctccacggcggcgatcgtcgagaacgcccagcagctaccgcattggccctggtcctt 884
||||||||||| | | ||| ||||||||||||||||| ||||| | ||||||||||||
Sbjct: 10300 gccctccacggacaccaccgtggagaacgcccagcagctgccgcacttgccctggtcctt 10359
Query: 885 gacgtcggtgacagcgcccttctgcctccagtcgacgg 922
|||| ||||||| |||||||| | | |||||||||||
Sbjct: 10360 gacgccggtgaccgcgcccttgcggcgccagtcgacgg 10397
Score = 58.0 bits (29), Expect = 1e-005
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 285 cttgacggggtaggatgcctccatggcgatgccgcag 321
||||||||||||||| || ||||||||||||||||||
Sbjct: 9751 cttgacggggtaggaggcttccatggcgatgccgcag 9787
Score = 46.1 bits (23), Expect = 0.041
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1056 catgtcgccgaagcggttgaggcggag 1082
||||||||||||||||||||| |||||
Sbjct: 10519 catgtcgccgaagcggttgagccggag 10545
Database: Oryza_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:41 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,799,914
Number of Sequences: 438736
Number of extensions: 1799914
Number of successful extensions: 24188
Number of sequences better than 0.5: 251
Number of HSP's better than 0.5 without gapping: 279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 20169
Number of HSP's gapped (non-prelim): 3848
length of query: 1122
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 1101
effective length of database: 2,791,206,460
effective search space: 3073118312460
effective search space used: 3073118312460
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 22 (44.1 bits)