BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738875.2.1
(761 letters)
Database: Oryza_nucl_with_EST.fasta
438,736 sequences; 2,800,419,916 total letters
Score E
Sequences producing significant alignments: (bits) Value
dbj|AB000801.2| Oryza sativa mRNA for chalcone synthase, co... 502 e-139
dbj|AB058397.1| Oryza sativa (japonica cultivar-group) CHS ... 502 e-139
gb|AC136925.1| Oryza sativa (japonica cultivar-group) chrom... 502 e-139
dbj|AK067810.1| Oryza sativa (japonica cultivar-group) cDNA... 502 e-139
gb|AC134256.4| Oryza sativa (japonica cultivar-group), comp... 502 e-139
ref|NT_107091.1| Oryza sativa (japonica cultivar-group), co... 502 e-139
gb|AACV01023282.1| Oryza sativa (japonica cultivar-group) c... 502 e-139
gb|CH401264.1| Oryza sativa (japonica cultivar-group) chrom... 502 e-139
gb|CM000148.1| Oryza sativa (japonica cultivar-group) chrom... 502 e-139
dbj|AP008217.1| Oryza sativa (japonica cultivar-group) geno... 502 e-139
gb|DP000010.1| Oryza sativa (japonica cultivar-group) chrom... 502 e-139
gb|CB684668.1|CB684668 OSJNEf14G16.r OSJNEf Oryza sativa (j... 466 e-129
gb|CB644311.1|CB644311 OSJNEb05H09.r OSJNEb Oryza sativa (j... 444 e-122
gb|CB656189.1|CB656189 OSJNEc10D24.r OSJNEc Oryza sativa (j... 440 e-121
gb|CB658949.1|CB658949 OSJNEc15G24.r OSJNEc Oryza sativa (j... 440 e-121
gb|CB652672.1|CB652672 OSJNEc02O19.r OSJNEc Oryza sativa (j... 436 e-120
gb|CB655945.1|CB655945 OSJNEc09M07.f OSJNEc Oryza sativa (j... 412 e-112
gb|CB659249.1|CB659249 OSJNEc16B06.r OSJNEc Oryza sativa (j... 406 e-111
gb|CB655647.1|CB655647 OSJNEc09E07.r OSJNEc Oryza sativa (j... 404 e-110
gb|AU161936.1|AU161936 AU161936 Rice shoot Oryza sativa (ja... 402 e-109
gb|CB652645.1|CB652645 OSJNEc02N19.r OSJNEc Oryza sativa (j... 402 e-109
gb|CB652647.1|CB652647 OSJNEc02N20.r OSJNEc Oryza sativa (j... 402 e-109
gb|CB653704.1|CB653704 OSJNEc04P21.r OSJNEc Oryza sativa (j... 402 e-109
gb|CB654662.1|CB654662 OSJNEc07F22.r OSJNEc Oryza sativa (j... 402 e-109
gb|CB655946.1|CB655946 OSJNEc09M07.r OSJNEc Oryza sativa (j... 402 e-109
gb|CB656853.1|CB656853 OSJNEc11K09.r OSJNEc Oryza sativa (j... 402 e-109
gb|CB674573.1|CB674573 OSJNEe09K22.r OSJNEe Oryza sativa (j... 402 e-109
gb|CB677918.1|CB677918 OSJNEe15F21.r OSJNEe Oryza sativa (j... 385 e-104
gb|CB646508.1|CB646508 OSJNEb09A17.r OSJNEb Oryza sativa (j... 369 1e-099
dbj|AP004002.3| Oryza sativa (japonica cultivar-group) geno... 361 4e-097
ref|NM_186515.1| Oryza sativa (japonica cultivar-group), mRNA 361 4e-097
ref|NT_079879.2| Oryza sativa (japonica cultivar-group) 361 4e-097
dbj|AP008213.1| Oryza sativa (japonica cultivar-group) geno... 361 4e-097
gb|CB645690.1|CB645690 OSJNEb07J04.r OSJNEb Oryza sativa (j... 355 2e-095
gb|CB658948.1|CB658948 OSJNEc15G24.f OSJNEc Oryza sativa (j... 353 9e-095
gb|AACV01015437.1| Oryza sativa (japonica cultivar-group) c... 347 5e-093
gb|CH401221.1| Oryza sativa (japonica cultivar-group) chrom... 347 5e-093
gb|CM000144.1| Oryza sativa (japonica cultivar-group) chrom... 347 5e-093
gb|AU162874.1|AU162874 AU162874 Rice green shoot Oryza sati... 333 8e-089
gb|CB659585.1|CB659585 OSJNEc16L02.f OSJNEc Oryza sativa (j... 333 8e-089
gb|CB650192.1|CB650192 OSJNEb14I06.r OSJNEb Oryza sativa (j... 319 1e-084
gb|CB648535.1|CB648535 OSJNEb11P09.r OSJNEb Oryza sativa (j... 315 2e-083
gb|CB643205.1|CB643205 OSJNEb03M07.r OSJNEb Oryza sativa (j... 250 9e-064
gb|CB680850.1|CB680850 OSJNEf06E21.r OSJNEf Oryza sativa (j... 246 1e-062
gb|AU096788.1|AU096788 AU096788 Rice green shoot Oryza sati... 242 2e-061
gb|AU066262.1|AU066262 AU066262 Rice shoot Oryza sativa (ja... 236 1e-059
gb|AU066267.2|AU066267 AU066267 Rice shoot Oryza sativa (ja... 236 1e-059
gb|CF326068.1|CF326068 JMT1--05-A08.g1 AtJMT-overexpressing... 230 9e-058
gb|CB653703.1|CB653703 OSJNEc04P21.f OSJNEc Oryza sativa (j... 222 2e-055
gb|C23616.1|C23616 C23616 Rice green shoot Oryza sativa (ja... 176 1e-041
gb|CB659024.1|CB659024 OSJNEc15J15.r OSJNEc Oryza sativa (j... 168 3e-039
gb|CB652646.1|CB652646 OSJNEc02N20.f OSJNEc Oryza sativa (j... 135 4e-029
gb|CB658978.1|CB658978 OSJNEc15H22.r OSJNEc Oryza sativa (j... 84 1e-013
emb|AL606593.1|OSJN00026 Oryza sativa (japonica cultivar-gr... 56 3e-005
dbj|AK100989.1| Oryza sativa (japonica cultivar-group) cDNA... 56 3e-005
ref|XM_470964.1| Oryza sativa (japonica cultivar-group), p... 56 3e-005
ref|NT_107194.1| Oryza sativa (japonica cultivar-group) 56 3e-005
emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromoso... 56 3e-005
dbj|AP008210.1| Oryza sativa (japonica cultivar-group) geno... 56 3e-005
dbj|AP003278.5| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AACV01001773.1| Oryza sativa (japonica cultivar-group) c... 52 4e-004
dbj|BA000010.8| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
ref|NM_192650.1| Oryza sativa (japonica cultivar-group), p... 52 4e-004
ref|NT_079926.2| Oryza sativa (japonica cultivar-group) 52 4e-004
dbj|AP003330.4| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|CH401166.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
gb|CM000138.1| Oryza sativa (japonica cultivar-group) chrom... 52 4e-004
dbj|AP008207.1| Oryza sativa (japonica cultivar-group) geno... 52 4e-004
gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 ... 50 0.002
gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 ... 50 0.002
gb|AACV01007620.1| Oryza sativa (japonica cultivar-group) c... 50 0.002
ref|XM_469239.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.002
ref|NT_079919.2| Oryza sativa (japonica cultivar-group) 50 0.002
gb|CH401176.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CM000140.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
dbj|AP008209.1| Oryza sativa (japonica cultivar-group) geno... 50 0.002
gb|DP000009.1| Oryza sativa (japonica cultivar-group) chrom... 50 0.002
gb|CB652644.1|CB652644 OSJNEc02N19.f OSJNEc Oryza sativa (j... 46 0.028
dbj|AP004167.1| Oryza sativa (japonica cultivar-group) chro... 40 1.7
dbj|AP004881.2| Oryza sativa (japonica cultivar-group) geno... 40 1.7
dbj|AP006438.3| Oryza sativa (japonica cultivar-group) geno... 40 1.7
gb|AACV01004871.1| Oryza sativa (japonica cultivar-group) c... 40 1.7
ref|NT_107203.1| Oryza sativa (japonica cultivar-group) 40 1.7
ref|NT_107180.1| Oryza sativa (japonica cultivar-group) 40 1.7
gb|CH401170.1| Oryza sativa (japonica cultivar-group) chrom... 40 1.7
gb|CM000139.1| Oryza sativa (japonica cultivar-group) chrom... 40 1.7
emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromoso... 40 1.7
dbj|AP008208.1| Oryza sativa (japonica cultivar-group) geno... 40 1.7
dbj|AK069415.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.7
dbj|AK099227.1| Oryza sativa (japonica cultivar-group) cDNA... 38 6.7
gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24... 38 6.7
dbj|AP003909.3| Oryza sativa (japonica cultivar-group) geno... 38 6.7
dbj|AP005325.5| Oryza sativa (japonica cultivar-group) geno... 38 6.7
gb|AC135568.3| Oryza sativa (japonica cultivar-group) chrom... 38 6.7
dbj|AP003207.3| Oryza sativa (japonica cultivar-group) geno... 38 6.7
gb|AACV01001056.1| Oryza sativa (japonica cultivar-group) c... 38 6.7
gb|AACV01006750.1| Oryza sativa (japonica cultivar-group) c... 38 6.7
gb|AACV01014936.1| Oryza sativa (japonica cultivar-group) c... 38 6.7
gb|AACV01015871.1| Oryza sativa (japonica cultivar-group) c... 38 6.7
gb|AACV01017100.1| Oryza sativa (japonica cultivar-group) c... 38 6.7
gb|AACV01023276.1| Oryza sativa (japonica cultivar-group) c... 38 6.7
ref|NM_187818.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.7
ref|NM_193977.1| Oryza sativa (japonica cultivar-group), p... 38 6.7
ref|XM_479686.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.7
ref|XM_480314.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.7
ref|NT_079854.2| Oryza sativa (japonica cultivar-group) 38 6.7
ref|NT_079961.2| Oryza sativa (japonica cultivar-group) 38 6.7
ref|XM_507085.1| PREDICTED Oryza sativa (japonica cultivar-... 38 6.7
dbj|AP005164.3| Oryza sativa (japonica cultivar-group) geno... 38 6.7
ref|NT_079899.2| Oryza sativa (japonica cultivar-group) 38 6.7
ref|NT_107239.1| Oryza sativa (japonica cultivar-group) 38 6.7
gb|CH401228.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.7
gb|CH401223.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.7
gb|CH401216.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.7
gb|CH401174.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.7
gb|CH401165.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.7
gb|CM000145.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.7
gb|CM000143.1| Oryza sativa (japonica cultivar-group) chrom... 38 6.7
emb|AJ535074.1|OSA535074 Oryza sativa (japonica cultivar-gr... 38 6.7
dbj|AP008214.1| Oryza sativa (japonica cultivar-group) geno... 38 6.7
>dbj|AB000801.2| Oryza sativa mRNA for chalcone synthase, complete cds
Length = 1782
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 938 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 997
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 998 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 1057
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 1058 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 1117
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 1118 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 1177
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 1178 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 1237
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 1238 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 1297
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1298 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 1357
Query: 434 accgg 438
||||
Sbjct: 1358 gccgg 1362
>dbj|AB058397.1| Oryza sativa (japonica cultivar-group) CHS gene for chalcone
synthase, complete cds
Length = 8072
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 4323 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 4382
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 4383 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 4442
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 4443 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 4502
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 4503 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 4562
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 4563 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 4622
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 4623 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 4682
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 4683 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 4742
Query: 434 accgg 438
||||
Sbjct: 4743 gccgg 4747
>gb|AC136925.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0090B19, *** SEQUENCING IN PROGRESS ***, 7 ordered
pieces
Length = 113164
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 86320 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 86379
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 86380 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 86439
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 86440 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 86499
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 86500 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 86559
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 86560 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 86619
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 86620 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 86679
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 86680 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 86739
Query: 434 accgg 438
||||
Sbjct: 86740 gccgg 86744
>dbj|AK067810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119K06, full
insert sequence
Length = 1755
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 929 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 988
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 989 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 1048
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 1049 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 1108
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 1109 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 1168
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 1169 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 1228
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 1229 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 1288
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1289 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 1348
Query: 434 accgg 438
||||
Sbjct: 1349 gccgg 1353
>gb|AC134256.4| Oryza sativa (japonica cultivar-group), complete sequence
Length = 178233
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Minus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 26880 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 26821
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 26820 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 26761
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 26760 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 26701
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 26700 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 26641
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 26640 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 26581
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 26580 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 26521
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 26520 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 26461
Query: 434 accgg 438
||||
Sbjct: 26460 gccgg 26456
>ref|NT_107091.1| Oryza sativa (japonica cultivar-group), complete sequence
Length = 178233
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Minus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 26880 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 26821
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 26820 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 26761
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 26760 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 26701
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 26700 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 26641
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 26640 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 26581
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 26580 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 26521
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 26520 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 26461
Query: 434 accgg 438
||||
Sbjct: 26460 gccgg 26456
>gb|AACV01023282.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023282, whole
genome shotgun sequence
Length = 7438
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Minus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 1928 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 1869
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 1868 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 1809
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 1808 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 1749
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 1748 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 1689
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 1688 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 1629
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 1628 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 1569
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1568 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 1509
Query: 434 accgg 438
||||
Sbjct: 1508 gccgg 1504
>gb|CH401264.1| Oryza sativa (japonica cultivar-group) chromosome 11 scaffold000101 genomic
scaffold, whole genome shotgun sequence
Length = 5106408
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Minus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 1315989 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 1315930
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 1315929 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 1315870
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 1315869 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 1315810
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 1315809 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 1315750
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 1315749 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 1315690
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 1315689 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 1315630
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 1315629 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 1315570
Query: 434 accgg 438
||||
Sbjct: 1315569 gccgg 1315565
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || |||||||||||||| ||| |||||
Sbjct: 1280586 ttctgggcggtgcaccccggcgggcgcgcgatcct 1280552
>gb|CM000148.1| Oryza sativa (japonica cultivar-group) chromosome 11, whole genome shotgun
sequence
Length = 22593549
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Minus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 15480971 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 15480912
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 15480911 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 15480852
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 15480851 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 15480792
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 15480791 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 15480732
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 15480731 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 15480672
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 15480671 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 15480612
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 15480611 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 15480552
Query: 434 accgg 438
||||
Sbjct: 15480551 gccgg 15480547
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || |||||||||||||| ||| |||||
Sbjct: 15445568 ttctgggcggtgcaccccggcgggcgcgcgatcct 15445534
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Minus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 18612500 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 18612441
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 18612440 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 18612381
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 18612380 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 18612321
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 18612320 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 18612261
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 18612260 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 18612201
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 18612200 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 18612141
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 18612140 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 18612081
Query: 434 accgg 438
||||
Sbjct: 18612080 gccgg 18612076
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || |||||||||||||| ||| |||||
Sbjct: 18577592 ttctgggcggtgcaccccggcgggcgcgcgatcct 18577558
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 502 bits (253), Expect = e-139
Identities = 382/425 (89%)
Strand = Plus / Minus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 18771901 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 18771842
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 18771841 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 18771782
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 18771781 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 18771722
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 18771721 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 18771662
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 18771661 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 18771602
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 18771601 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 18771542
Query: 374 ttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
|||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 18771541 ttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 18771482
Query: 434 accgg 438
||||
Sbjct: 18771481 gccgg 18771477
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || |||||||||||||| ||| |||||
Sbjct: 18736993 ttctgggcggtgcaccccggcgggcgcgcgatcct 18736959
>gb|CB684668.1|CB684668 OSJNEf14G16.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf14G16 3', mRNA sequence
Length = 795
Score = 466 bits (235), Expect = e-129
Identities = 346/383 (90%)
Strand = Plus / Minus
Query: 56 ttccacctgctcaaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggac 115
||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||| |
Sbjct: 794 ttccacctgctcaaggacgtgccggggctcatctcgaagaacatcgagcgcgcgctgggc 735
Query: 116 gacgcgttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcacccc 175
|||||||||| ||||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct: 734 gacgcgttcacaccgctggggatctcggactggaactccatcttctgggtggcgcacccc 675
Query: 176 ggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatg 235
|| || || || ||||| |||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 674 ggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggacaaggagaggatg 615
Query: 236 cgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttc 295
| || || |||||||| || |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 614 agggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttc 555
Query: 296 atcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggc 355
|||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 554 atcctcgacgagatgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggc 495
Query: 356 ctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctc 415
| ||||||||||||||||||||||||||||| || |||||||| ||||||||||| |||
Sbjct: 494 atggactggggcgtcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctc 435
Query: 416 cacagcgtccccatcaccaccgg 438
|||||||||||||||||| ||||
Sbjct: 434 cacagcgtccccatcaccgccgg 412
>gb|CB644311.1|CB644311 OSJNEb05H09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb05H09 3', mRNA sequence
Length = 829
Score = 444 bits (224), Expect = e-122
Identities = 335/372 (90%)
Strand = Plus / Minus
Query: 67 caaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaa 126
|||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||
Sbjct: 829 caaggacgtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcac 770
Query: 127 gccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgc 186
||||| || ||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 769 accgctggggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggc 710
Query: 187 catcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccg 246
||||| |||||||||||||| ||||| ||||||||||||| |||||| | || || ||
Sbjct: 709 gatcctggaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcg 650
Query: 247 ccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacga 306
|||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 649 ccacgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacga 590
Query: 307 gatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactgggg 366
||||||||||||||||||||||||||| || |||||||| ||||||||| | ||||||||
Sbjct: 589 gatgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggcatggactgggg 530
Query: 367 cgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccc 426
||||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||
Sbjct: 529 cgtcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccc 470
Query: 427 catcaccaccgg 438
||||||| ||||
Sbjct: 469 catcaccgccgg 458
>gb|CB656189.1|CB656189 OSJNEc10D24.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc10D24 3', mRNA sequence
Length = 821
Score = 440 bits (222), Expect = e-121
Identities = 333/370 (90%)
Strand = Plus / Minus
Query: 69 aggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagc 128
|||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |
Sbjct: 821 aggacgtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacac 762
Query: 129 cgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcca 188
|||| || ||||| ||||||||||||||||||||||||||||||||||| || || || |
Sbjct: 761 cgctggggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcga 702
Query: 189 tcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgcc 248
|||| |||||||||||||| ||||| ||||||||||||| |||||| | || || ||||
Sbjct: 701 tcctggaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgcc 642
Query: 249 acgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgaga 308
|||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 641 acgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgaga 582
Query: 309 tgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcg 368
||||||||||||||||||||||||| || |||||||| ||||||||| | ||||||||||
Sbjct: 581 tgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcg 522
Query: 369 tcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccca 428
||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||
Sbjct: 521 tcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtcccca 462
Query: 429 tcaccaccgg 438
||||| ||||
Sbjct: 461 tcaccgccgg 452
>gb|CB658949.1|CB658949 OSJNEc15G24.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc15G24 3', mRNA sequence
Length = 772
Score = 440 bits (222), Expect = e-121
Identities = 333/370 (90%)
Strand = Plus / Minus
Query: 69 aggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagc 128
|||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |
Sbjct: 772 aggacgtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacac 713
Query: 129 cgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcca 188
|||| || ||||| ||||||||||||||||||||||||||||||||||| || || || |
Sbjct: 712 cgctggggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcga 653
Query: 189 tcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgcc 248
|||| |||||||||||||| ||||| ||||||||||||| |||||| | || || ||||
Sbjct: 652 tcctggaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgcc 593
Query: 249 acgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgaga 308
|||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||||
Sbjct: 592 acgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgaga 533
Query: 309 tgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcg 368
||||||||||||||||||||||||| || |||||||| ||||||||| | ||||||||||
Sbjct: 532 tgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcg 473
Query: 369 tcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccca 428
||||||||||||||||||| || |||||||| ||||||||||| ||||||||||||||||
Sbjct: 472 tcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtcccca 413
Query: 429 tcaccaccgg 438
||||| ||||
Sbjct: 412 tcaccgccgg 403
>gb|CB652672.1|CB652672 OSJNEc02O19.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02O19 3', mRNA sequence
Length = 690
Score = 436 bits (220), Expect = e-120
Identities = 334/372 (89%)
Strand = Plus / Minus
Query: 67 caaggacgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaa 126
|||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||
Sbjct: 690 caaggacgtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcac 631
Query: 127 gccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgc 186
||||| || ||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 630 accgctggggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggc 571
Query: 187 catcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccg 246
||||| |||||||||||||| ||||| ||||||||||||| |||||| | || || ||
Sbjct: 570 gatcctggaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcg 511
Query: 247 ccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacga 306
|||||| || |||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct: 510 ccacgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacga 451
Query: 307 gatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactgggg 366
||||||||||||||||||||||||||| || |||||||| ||||||||| | ||||||||
Sbjct: 450 gatgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggcatggactgggg 391
Query: 367 cgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccc 426
||||||||||||||||||||| || |||||||| ||||||||||| |||||||| |||||
Sbjct: 390 cgtcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagggtccc 331
Query: 427 catcaccaccgg 438
||||||| ||||
Sbjct: 330 catcaccgccgg 319
>gb|CB655945.1|CB655945 OSJNEc09M07.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09M07 5', mRNA sequence
Length = 753
Score = 412 bits (208), Expect = e-112
Identities = 322/360 (89%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 394 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 453
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 454 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 513
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 514 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 573
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 574 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 633
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 634 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 693
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|||||||||||||||||||| || |||||||| ||||||||| | |||||||||||||||
Sbjct: 694 aagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctc 753
>gb|CB659249.1|CB659249 OSJNEc16B06.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16B06 3', mRNA sequence
Length = 729
Score = 406 bits (205), Expect = e-111
Identities = 310/345 (89%)
Strand = Plus / Minus
Query: 94 gaacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactc 153
|||||||| |||||||||| ||||||||||| ||||| || ||||| |||||||||||
Sbjct: 729 gaacatcgagcgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactc 670
Query: 154 catcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggt 213
|||||||||||||||||||||||| || || || ||||| |||||||||||||| |||||
Sbjct: 669 catcttctgggtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggt 610
Query: 214 cgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacat 273
||||||||||||| |||||| | || || |||||||| || |||||||||||||||||
Sbjct: 609 tgggctggacaaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacat 550
Query: 274 gtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacgg 333
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtcgagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacgg 490
Query: 334 acaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggact 393
|| |||||||| ||||||||| | ||||||||||||||||||||||||||||| || ||
Sbjct: 489 ccacgccaccaccggcgagggcatggactggggcgtcctcttcggcttcggccccggcct 430
Query: 394 caccgtcgagaccgtcgtgctccacagcgtccccatcaccaccgg 438
|||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 429 caccgttgagaccgtcgtcctccacagcgtccccatcaccgccgg 385
>gb|CB655647.1|CB655647 OSJNEc09E07.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09E07 3', mRNA sequence
Length = 746
Score = 404 bits (204), Expect = e-110
Identities = 309/344 (89%)
Strand = Plus / Minus
Query: 95 aacatcggccgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactcc 154
||||||| |||||||||| ||||||||||| ||||| || ||||| ||||||||||||
Sbjct: 746 aacatcgagcgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactcc 687
Query: 155 atcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtc 214
||||||||||||||||||||||| || || || ||||| |||||||||||||| |||||
Sbjct: 686 atcttctgggtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggtt 627
Query: 215 gggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatg 274
||||||||||||| |||||| | || || |||||||| || ||||||||||||||||||
Sbjct: 626 gggctggacaaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatg 567
Query: 275 tccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacgga 334
|| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tcgagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggc 507
Query: 335 caggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactc 394
|| |||||||| ||||||||| | ||||||||||||||||||||||||||||| || |||
Sbjct: 506 cacgccaccaccggcgagggcatggactggggcgtcctcttcggcttcggccccggcctc 447
Query: 395 accgtcgagaccgtcgtgctccacagcgtccccatcaccaccgg 438
||||| ||||||||||| ||||||||||||||||||||| ||||
Sbjct: 446 accgttgagaccgtcgtcctccacagcgtccccatcaccgccgg 403
>gb|AU161936.1|AU161936 AU161936 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S6429, mRNA sequence
Length = 415
Score = 402 bits (203), Expect = e-109
Identities = 333/374 (89%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 44 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 103
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 104 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 163
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 164 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 223
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 224 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 283
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 284 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 343
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctc 373
|| |||||||||||||||| || |||||||| ||||||||| | ||||||||||| |||
Sbjct: 344 aa-ngctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgt-ctc 401
Query: 374 ttcggcttcggccc 387
||||||||||||||
Sbjct: 402 ttcggcttcggccc 415
>gb|CB652645.1|CB652645 OSJNEc02N19.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02N19 3', mRNA sequence
Length = 645
Score = 402 bits (203), Expect = e-109
Identities = 302/335 (90%)
Strand = Plus / Minus
Query: 104 cgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgg 163
|||||||||| ||||||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct: 642 cgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgg 583
Query: 164 gtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggac 223
|||||||||||||| || || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 582 gtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggac 523
Query: 224 aaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcc 283
|||| |||||| | || || |||||||| || |||||||||||||||||||| ||||||
Sbjct: 522 aaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcc 463
Query: 284 tgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccacc 343
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 462 tgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccacc 403
Query: 344 acgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgag 403
|| ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 402 accggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgag 343
Query: 404 accgtcgtgctccacagcgtccccatcaccaccgg 438
|||||||| ||||||||||||||||||||| ||||
Sbjct: 342 accgtcgtcctccacagcgtccccatcaccgccgg 308
>gb|CB652647.1|CB652647 OSJNEc02N20.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02N20 3', mRNA sequence
Length = 735
Score = 402 bits (203), Expect = e-109
Identities = 302/335 (90%)
Strand = Plus / Minus
Query: 104 cgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgg 163
|||||||||| ||||||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct: 732 cgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgg 673
Query: 164 gtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggac 223
|||||||||||||| || || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 672 gtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggac 613
Query: 224 aaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcc 283
|||| |||||| | || || |||||||| || |||||||||||||||||||| ||||||
Sbjct: 612 aaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcc 553
Query: 284 tgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccacc 343
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 552 tgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccacc 493
Query: 344 acgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgag 403
|| ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 492 accggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgag 433
Query: 404 accgtcgtgctccacagcgtccccatcaccaccgg 438
|||||||| ||||||||||||||||||||| ||||
Sbjct: 432 accgtcgtcctccacagcgtccccatcaccgccgg 398
>gb|CB653704.1|CB653704 OSJNEc04P21.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04P21 3', mRNA sequence
Length = 778
Score = 402 bits (203), Expect = e-109
Identities = 302/335 (90%)
Strand = Plus / Minus
Query: 104 cgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgg 163
|||||||||| ||||||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct: 771 cgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgg 712
Query: 164 gtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggac 223
|||||||||||||| || || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 711 gtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggac 652
Query: 224 aaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcc 283
|||| |||||| | || || |||||||| || |||||||||||||||||||| ||||||
Sbjct: 651 aaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcc 592
Query: 284 tgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccacc 343
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 591 tgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccacc 532
Query: 344 acgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgag 403
|| ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 531 accggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgag 472
Query: 404 accgtcgtgctccacagcgtccccatcaccaccgg 438
|||||||| ||||||||||||||||||||| ||||
Sbjct: 471 accgtcgtcctccacagcgtccccatcaccgccgg 437
>gb|CB654662.1|CB654662 OSJNEc07F22.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc07F22 3', mRNA sequence
Length = 751
Score = 402 bits (203), Expect = e-109
Identities = 302/335 (90%)
Strand = Plus / Minus
Query: 104 cgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgg 163
|||||||||| ||||||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct: 745 cgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgg 686
Query: 164 gtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggac 223
|||||||||||||| || || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 685 gtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggac 626
Query: 224 aaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcc 283
|||| |||||| | || || |||||||| || |||||||||||||||||||| ||||||
Sbjct: 625 aaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcc 566
Query: 284 tgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccacc 343
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 565 tgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccacc 506
Query: 344 acgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgag 403
|| ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 505 accggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgag 446
Query: 404 accgtcgtgctccacagcgtccccatcaccaccgg 438
|||||||| ||||||||||||||||||||| ||||
Sbjct: 445 accgtcgtcctccacagcgtccccatcaccgccgg 411
>gb|CB655946.1|CB655946 OSJNEc09M07.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc09M07 3', mRNA sequence
Length = 749
Score = 402 bits (203), Expect = e-109
Identities = 302/335 (90%)
Strand = Plus / Minus
Query: 104 cgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgg 163
|||||||||| ||||||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct: 737 cgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgg 678
Query: 164 gtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggac 223
|||||||||||||| || || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 677 gtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggac 618
Query: 224 aaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcc 283
|||| |||||| | || || |||||||| || |||||||||||||||||||| ||||||
Sbjct: 617 aaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcc 558
Query: 284 tgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccacc 343
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 557 tgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccacc 498
Query: 344 acgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgag 403
|| ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 497 accggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgag 438
Query: 404 accgtcgtgctccacagcgtccccatcaccaccgg 438
|||||||| ||||||||||||||||||||| ||||
Sbjct: 437 accgtcgtcctccacagcgtccccatcaccgccgg 403
>gb|CB656853.1|CB656853 OSJNEc11K09.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc11K09 3', mRNA sequence
Length = 794
Score = 402 bits (203), Expect = e-109
Identities = 302/335 (90%)
Strand = Plus / Minus
Query: 104 cgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgg 163
|||||||||| ||||||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct: 792 cgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgg 733
Query: 164 gtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggac 223
|||||||||||||| || || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 732 gtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggac 673
Query: 224 aaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcc 283
|||| |||||| | || || |||||||| || |||||||||||||||||||| ||||||
Sbjct: 672 aaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcc 613
Query: 284 tgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccacc 343
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 612 tgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccacc 553
Query: 344 acgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgag 403
|| ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 552 accggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgag 493
Query: 404 accgtcgtgctccacagcgtccccatcaccaccgg 438
|||||||| ||||||||||||||||||||| ||||
Sbjct: 492 accgtcgtcctccacagcgtccccatcaccgccgg 458
>gb|CB674573.1|CB674573 OSJNEe09K22.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe09K22 3', mRNA sequence
Length = 739
Score = 402 bits (203), Expect = e-109
Identities = 302/335 (90%)
Strand = Plus / Minus
Query: 104 cgcgcgctggacgacgcgttcaagccgctcggcatctccgactggaactccatcttctgg 163
|||||||||| ||||||||||| ||||| || ||||| |||||||||||||||||||||
Sbjct: 737 cgcgcgctgggcgacgcgttcacaccgctggggatctcggactggaactccatcttctgg 678
Query: 164 gtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggac 223
|||||||||||||| || || || ||||| |||||||||||||| ||||| |||||||||
Sbjct: 677 gtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctggac 618
Query: 224 aaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcc 283
|||| |||||| | || || |||||||| || |||||||||||||||||||| ||||||
Sbjct: 617 aaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcc 558
Query: 284 tgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccacc 343
||||| |||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 557 tgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccacc 498
Query: 344 acgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgag 403
|| ||||||||| | ||||||||||||||||||||||||||||| || |||||||| |||
Sbjct: 497 accggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttgag 438
Query: 404 accgtcgtgctccacagcgtccccatcaccaccgg 438
|||||||| ||||||||||||||||||||| ||||
Sbjct: 437 accgtcgtcctccacagcgtccccatcaccgccgg 403
>gb|CB677918.1|CB677918 OSJNEe15F21.r OSJNEe Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEe15F21 3', mRNA sequence
Length = 731
Score = 385 bits (194), Expect = e-104
Identities = 290/322 (90%)
Strand = Plus / Minus
Query: 117 acgcgttcaagccgctcggcatctccgactggaactccatcttctgggtggcgcaccccg 176
||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 731 acgcgttcacaccgctggggatctcggactggaactccatcttctgggtggcgcaccccg 672
Query: 177 gcgggcccgccatcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgc 236
| || || || ||||| |||||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 671 gaggtccggcgatcctggaccaggtggaggcgaaggttgggctggacaaggagaggatga 612
Query: 237 gcgccacccgccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttca 296
| || || |||||||| || |||||||||||||||||||| ||||||||||| |||||||
Sbjct: 611 gggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttca 552
Query: 297 tcctcgacgagatgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcc 356
||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct: 551 tcctcgacgagatgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggca 492
Query: 357 tcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
| ||||||||||||||||||||||||||||| || |||||||| ||||||||||| ||||
Sbjct: 491 tggactggggcgtcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctcc 432
Query: 417 acagcgtccccatcaccaccgg 438
||||||||||||||||| ||||
Sbjct: 431 acagcgtccccatcaccgccgg 410
>gb|CB646508.1|CB646508 OSJNEb09A17.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb09A17 3', mRNA sequence
Length = 716
Score = 369 bits (186), Expect = 1e-099
Identities = 273/302 (90%)
Strand = Plus / Minus
Query: 137 atctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgac 196
||||| ||||||||||||||||| ||||||||||||||||| || || || ||||| |||
Sbjct: 711 atctcggactggaactccatcttttgggtggcgcaccccggaggtccggcgatcctggac 652
Query: 197 caggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctc 256
||||||||||| ||||| ||||||||||||| |||||| | || || |||||||| ||
Sbjct: 651 caggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtgctg 592
Query: 257 tccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaag 316
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct: 591 tccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgcaag 532
Query: 317 cgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttc 376
||||||||||||||||| || |||||||| ||||||||| | ||||||||||||||||||
Sbjct: 531 cgctccgccgaggacggccacgccaccaccggcgagggcatggactggggcgtcctcttc 472
Query: 377 ggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccacc 436
||||||||||| || |||||||| ||||||||||| ||||||||||||||||||||| ||
Sbjct: 471 ggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcaccgcc 412
Query: 437 gg 438
||
Sbjct: 411 gg 410
>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
clone:OJ1116_C08
Length = 102317
Score = 361 bits (182), Expect = 4e-097
Identities = 362/422 (85%)
Strand = Plus / Minus
Query: 12 cggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaagg 71
|||||| |||||||| || ||||||||||||||||| |||||||||||||||| |||||
Sbjct: 77775 cggaggacgccatcgtggggcacctccgcgaggtgggtctcaccttccacctgcccaagg 77716
Query: 72 acgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgc 131
|||| || | | |||| ||| | | ||| ||||||| |||||| |||| |||||
Sbjct: 77715 acgtcccggagttcatatccgacagtgtcgagggcgcgctcaccgacgccttcatgccgc 77656
Query: 132 tcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcc 191
||||| || |||||||||||||||||||||||||| |||||| ||||| || |||||||
Sbjct: 77655 tcggcgtccacgactggaactccatcttctgggtggtgcacccgggcggtccggccatcc 77596
Query: 192 tcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacg 251
|||||||||| |||| ||||||| || |||||||| | ||||||||| ||||| |||
Sbjct: 77595 tcgaccaggttgaggagaaggtcgccctccacaaggcccgcatgcgcgcctcccgcaacg 77536
Query: 252 tcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgc 311
||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 77535 tcctctccgagtacggcaacatggccagcgccaccgtcctcttcgtcctcgacgagatgc 77476
Query: 312 gcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcc 371
|||||| ||| ||||| ||||| || |||||||| ||||||||| | |||||||||||||
Sbjct: 77475 gcaagctctctgccgacgacggccacgccaccaccggcgagggcatggactggggcgtcc 77416
Query: 372 tcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatca 431
||||||||||||| || || |||||||||||||| |||| |||||||||||||||||||
Sbjct: 77415 tcttcggcttcggtcctggcctcaccgtcgagactatcgttctccacagcgtccccatca 77356
Query: 432 cc 433
||
Sbjct: 77355 cc 77354
>ref|NM_186515.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1212
Score = 361 bits (182), Expect = 4e-097
Identities = 362/422 (85%)
Strand = Plus / Plus
Query: 12 cggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaagg 71
|||||| |||||||| || ||||||||||||||||| |||||||||||||||| |||||
Sbjct: 764 cggaggacgccatcgtggggcacctccgcgaggtgggtctcaccttccacctgcccaagg 823
Query: 72 acgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgc 131
|||| || | | |||| ||| | | ||| ||||||| |||||| |||| |||||
Sbjct: 824 acgtcccggagttcatatccgacagtgtcgagggcgcgctcaccgacgccttcatgccgc 883
Query: 132 tcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcc 191
||||| || |||||||||||||||||||||||||| |||||| ||||| || |||||||
Sbjct: 884 tcggcgtccacgactggaactccatcttctgggtggtgcacccgggcggtccggccatcc 943
Query: 192 tcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacg 251
|||||||||| |||| ||||||| || |||||||| | ||||||||| ||||| |||
Sbjct: 944 tcgaccaggttgaggagaaggtcgccctccacaaggcccgcatgcgcgcctcccgcaacg 1003
Query: 252 tcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgc 311
||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 1004 tcctctccgagtacggcaacatggccagcgccaccgtcctcttcgtcctcgacgagatgc 1063
Query: 312 gcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcc 371
|||||| ||| ||||| ||||| || |||||||| ||||||||| | |||||||||||||
Sbjct: 1064 gcaagctctctgccgacgacggccacgccaccaccggcgagggcatggactggggcgtcc 1123
Query: 372 tcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatca 431
||||||||||||| || || |||||||||||||| |||| |||||||||||||||||||
Sbjct: 1124 tcttcggcttcggtcctggcctcaccgtcgagactatcgttctccacagcgtccccatca 1183
Query: 432 cc 433
||
Sbjct: 1184 cc 1185
>ref|NT_079879.2| Oryza sativa (japonica cultivar-group)
Length = 11570172
Score = 361 bits (182), Expect = 4e-097
Identities = 362/422 (85%)
Strand = Plus / Minus
Query: 12 cggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaagg 71
|||||| |||||||| || ||||||||||||||||| |||||||||||||||| |||||
Sbjct: 6283287 cggaggacgccatcgtggggcacctccgcgaggtgggtctcaccttccacctgcccaagg 6283228
Query: 72 acgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgc 131
|||| || | | |||| ||| | | ||| ||||||| |||||| |||| |||||
Sbjct: 6283227 acgtcccggagttcatatccgacagtgtcgagggcgcgctcaccgacgccttcatgccgc 6283168
Query: 132 tcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcc 191
||||| || |||||||||||||||||||||||||| |||||| ||||| || |||||||
Sbjct: 6283167 tcggcgtccacgactggaactccatcttctgggtggtgcacccgggcggtccggccatcc 6283108
Query: 192 tcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacg 251
|||||||||| |||| ||||||| || |||||||| | ||||||||| ||||| |||
Sbjct: 6283107 tcgaccaggttgaggagaaggtcgccctccacaaggcccgcatgcgcgcctcccgcaacg 6283048
Query: 252 tcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgc 311
||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 6283047 tcctctccgagtacggcaacatggccagcgccaccgtcctcttcgtcctcgacgagatgc 6282988
Query: 312 gcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcc 371
|||||| ||| ||||| ||||| || |||||||| ||||||||| | |||||||||||||
Sbjct: 6282987 gcaagctctctgccgacgacggccacgccaccaccggcgagggcatggactggggcgtcc 6282928
Query: 372 tcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatca 431
||||||||||||| || || |||||||||||||| |||| |||||||||||||||||||
Sbjct: 6282927 tcttcggcttcggtcctggcctcaccgtcgagactatcgttctccacagcgtccccatca 6282868
Query: 432 cc 433
||
Sbjct: 6282867 cc 6282866
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 361 bits (182), Expect = 4e-097
Identities = 362/422 (85%)
Strand = Plus / Minus
Query: 12 cggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaagg 71
|||||| |||||||| || ||||||||||||||||| |||||||||||||||| |||||
Sbjct: 6327215 cggaggacgccatcgtggggcacctccgcgaggtgggtctcaccttccacctgcccaagg 6327156
Query: 72 acgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgc 131
|||| || | | |||| ||| | | ||| ||||||| |||||| |||| |||||
Sbjct: 6327155 acgtcccggagttcatatccgacagtgtcgagggcgcgctcaccgacgccttcatgccgc 6327096
Query: 132 tcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcc 191
||||| || |||||||||||||||||||||||||| |||||| ||||| || |||||||
Sbjct: 6327095 tcggcgtccacgactggaactccatcttctgggtggtgcacccgggcggtccggccatcc 6327036
Query: 192 tcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacg 251
|||||||||| |||| ||||||| || |||||||| | ||||||||| ||||| |||
Sbjct: 6327035 tcgaccaggttgaggagaaggtcgccctccacaaggcccgcatgcgcgcctcccgcaacg 6326976
Query: 252 tcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgc 311
||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 6326975 tcctctccgagtacggcaacatggccagcgccaccgtcctcttcgtcctcgacgagatgc 6326916
Query: 312 gcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcc 371
|||||| ||| ||||| ||||| || |||||||| ||||||||| | |||||||||||||
Sbjct: 6326915 gcaagctctctgccgacgacggccacgccaccaccggcgagggcatggactggggcgtcc 6326856
Query: 372 tcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatca 431
||||||||||||| || || |||||||||||||| |||| |||||||||||||||||||
Sbjct: 6326855 tcttcggcttcggtcctggcctcaccgtcgagactatcgttctccacagcgtccccatca 6326796
Query: 432 cc 433
||
Sbjct: 6326795 cc 6326794
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 12831463 ttctgggcggtgcaccccggcgggccggcgatcct 12831429
>gb|CB645690.1|CB645690 OSJNEb07J04.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb07J04 3', mRNA sequence
Length = 737
Score = 355 bits (179), Expect = 2e-095
Identities = 278/311 (89%)
Strand = Plus / Minus
Query: 128 ccgctcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgcc 187
||||| || ||||| ||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 737 ccgctggggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcg 678
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||| ||||| || |||||||||| |||||| | || || |||
Sbjct: 677 atcctggaccaggtggaggcgaaggttggtctggacaaggagaggatgagggcgacgcgc 618
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 617 cacgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgag 558
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||||||||||||||||||||| || |||||||| ||||||||| | |||||||||
Sbjct: 557 atgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggc 498
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||||||||||||||| || ||| |||| |||||||| || |||||||||||||||
Sbjct: 497 gtcctcttcggcttcggccccggcctccccgttgagaccgttgtcctccacagcgtcccc 438
Query: 428 atcaccaccgg 438
|||||| ||||
Sbjct: 437 atcaccgccgg 427
>gb|CB658948.1|CB658948 OSJNEc15G24.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc15G24 5', mRNA sequence
Length = 766
Score = 353 bits (178), Expect = 9e-095
Identities = 277/310 (89%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 457 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 516
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 517 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 576
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 577 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 636
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| ||||| ||||||||||||| |||||| | || || ||||||||
Sbjct: 637 gaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtg 696
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 697 ctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgc 756
Query: 314 aagcgctccg 323
||||||||||
Sbjct: 757 aagcgctccg 766
>gb|AACV01015437.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015437, whole
genome shotgun sequence
Length = 2098
Score = 347 bits (175), Expect = 5e-093
Identities = 362/423 (85%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 12 cggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaagg 71
|||||| |||||||| || ||||||||||||||||| |||||||||||||||| |||||
Sbjct: 1491 cggaggacgccatcgtggggcacctccgcgaggtgggtctcaccttccacctgcccaagg 1432
Query: 72 acgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgc 131
|||| || | | |||| ||| | | ||| ||||||| |||||| |||| |||||
Sbjct: 1431 acgtcccggagttcatatccgacagtgtcgagggcgcgctcaccgacgccttcatgccgc 1372
Query: 132 tcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcc 191
||||| || |||||||||||||||||||||||||| |||||| ||||| || |||||||
Sbjct: 1371 tcggcgtccacgactggaactccatcttctgggtggtgcacccgggcggtccggccatcc 1312
Query: 192 tcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacg 251
|||||||||| |||| ||||||| || |||||||| | ||||||||| ||||| |||
Sbjct: 1311 tcgaccaggttgaggagaaggtcgccctccacaaggcccgcatgcgcgcctcccgcaacg 1252
Query: 252 tcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgc 311
||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 1251 tcctctccgagtacggcaacatggccagcgccaccgtcctcttcgtcctcgacgagatgc 1192
Query: 312 gcaagcgctccgccgaggacggacaggccaccacgggcga-gggcctcgactggggcgtc 370
|||||| ||| ||||| ||||| || |||||||| ||||| |||| | ||||||||||||
Sbjct: 1191 gcaagctctctgccgacgacggccacgccaccaccggcgaggggcatggactggggcgtc 1132
Query: 371 ctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatc 430
|||||||||||||| || || |||||||||||||| |||| ||||||||||||||||||
Sbjct: 1131 ctcttcggcttcggtcctggcctcaccgtcgagactatcgttctccacagcgtccccatc 1072
Query: 431 acc 433
|||
Sbjct: 1071 acc 1069
>gb|CH401221.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000058
genomic scaffold, whole genome shotgun sequence
Length = 3500188
Score = 347 bits (175), Expect = 5e-093
Identities = 362/423 (85%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 12 cggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaagg 71
|||||| |||||||| || ||||||||||||||||| |||||||||||||||| |||||
Sbjct: 184262 cggaggacgccatcgtggggcacctccgcgaggtgggtctcaccttccacctgcccaagg 184203
Query: 72 acgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgc 131
|||| || | | |||| ||| | | ||| ||||||| |||||| |||| |||||
Sbjct: 184202 acgtcccggagttcatatccgacagtgtcgagggcgcgctcaccgacgccttcatgccgc 184143
Query: 132 tcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcc 191
||||| || |||||||||||||||||||||||||| |||||| ||||| || |||||||
Sbjct: 184142 tcggcgtccacgactggaactccatcttctgggtggtgcacccgggcggtccggccatcc 184083
Query: 192 tcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacg 251
|||||||||| |||| ||||||| || |||||||| | ||||||||| ||||| |||
Sbjct: 184082 tcgaccaggttgaggagaaggtcgccctccacaaggcccgcatgcgcgcctcccgcaacg 184023
Query: 252 tcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgc 311
||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 184022 tcctctccgagtacggcaacatggccagcgccaccgtcctcttcgtcctcgacgagatgc 183963
Query: 312 gcaagcgctccgccgaggacggacaggccaccacgggcga-gggcctcgactggggcgtc 370
|||||| ||| ||||| ||||| || |||||||| ||||| |||| | ||||||||||||
Sbjct: 183962 gcaagctctctgccgacgacggccacgccaccaccggcgaggggcatggactggggcgtc 183903
Query: 371 ctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatc 430
|||||||||||||| || || |||||||||||||| |||| ||||||||||||||||||
Sbjct: 183902 ctcttcggcttcggtcctggcctcaccgtcgagactatcgttctccacagcgtccccatc 183843
Query: 431 acc 433
|||
Sbjct: 183842 acc 183840
>gb|CM000144.1| Oryza sativa (japonica cultivar-group) chromosome 7, whole genome shotgun
sequence
Length = 28626509
Score = 347 bits (175), Expect = 5e-093
Identities = 362/423 (85%), Gaps = 1/423 (0%)
Strand = Plus / Minus
Query: 12 cggagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaagg 71
|||||| |||||||| || ||||||||||||||||| |||||||||||||||| |||||
Sbjct: 6237887 cggaggacgccatcgtggggcacctccgcgaggtgggtctcaccttccacctgcccaagg 6237828
Query: 72 acgtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgc 131
|||| || | | |||| ||| | | ||| ||||||| |||||| |||| |||||
Sbjct: 6237827 acgtcccggagttcatatccgacagtgtcgagggcgcgctcaccgacgccttcatgccgc 6237768
Query: 132 tcggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcc 191
||||| || |||||||||||||||||||||||||| |||||| ||||| || |||||||
Sbjct: 6237767 tcggcgtccacgactggaactccatcttctgggtggtgcacccgggcggtccggccatcc 6237708
Query: 192 tcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacg 251
|||||||||| |||| ||||||| || |||||||| | ||||||||| ||||| |||
Sbjct: 6237707 tcgaccaggttgaggagaaggtcgccctccacaaggcccgcatgcgcgcctcccgcaacg 6237648
Query: 252 tcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgc 311
||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct: 6237647 tcctctccgagtacggcaacatggccagcgccaccgtcctcttcgtcctcgacgagatgc 6237588
Query: 312 gcaagcgctccgccgaggacggacaggccaccacgggcga-gggcctcgactggggcgtc 370
|||||| ||| ||||| ||||| || |||||||| ||||| |||| | ||||||||||||
Sbjct: 6237587 gcaagctctctgccgacgacggccacgccaccaccggcgaggggcatggactggggcgtc 6237528
Query: 371 ctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatc 430
|||||||||||||| || || |||||||||||||| |||| ||||||||||||||||||
Sbjct: 6237527 ctcttcggcttcggtcctggcctcaccgtcgagactatcgttctccacagcgtccccatc 6237468
Query: 431 acc 433
|||
Sbjct: 6237467 acc 6237465
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 12040048 ttctgggcggtgcaccccggcgggccggcgatcct 12040014
>gb|AU162874.1|AU162874 AU162874 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S12396, mRNA sequence
Length = 389
Score = 333 bits (168), Expect = 8e-089
Identities = 297/338 (87%), Gaps = 2/338 (0%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||||
Sbjct: 45 gagggcgccatcgacggccacctgaaggaggtcgggctgacgttccacctgctcaaggac 104
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 105 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 164
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| | || || |||||
Sbjct: 165 gggatctcggactggaactccatcttctgggtggcgcaccccggangtccggcgatcctg 224
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||||||||| || || ||||||||||||| |||||| | || || ||||||||
Sbjct: 225 gaccaggtggaggcgaa-gttgggctggacaaggagaggatgagggcgacgcgccacgtg 283
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgc 313
|| |||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||
Sbjct: 284 ctgtccgagtacggcaacatgtcgancgcctgcgtgctcttcatcctcgacgagatgcgc 343
Query: 314 aagcgctccgccgaggacggacaggccaccacgggcga 351
|| ||||||||||||||||| || |||||||| |||||
Sbjct: 344 aa-cgctccgccgaggacggccacgccaccaccggcga 380
>gb|CB659585.1|CB659585 OSJNEc16L02.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc16L02 5', mRNA sequence
Length = 677
Score = 333 bits (168), Expect = 8e-089
Identities = 249/276 (90%)
Strand = Plus / Minus
Query: 163 ggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggccaaggtcgggctgga 222
||||||||||||||| || || || ||||| |||||||||||||| ||||| ||||||||
Sbjct: 677 ggtggcgcaccccggaggtccggcgatcctggaccaggtggaggcgaaggttgggctgga 618
Query: 223 caaggccaggatgcgcgccacccgccacgtcctctccgagtacggcaacatgtccagcgc 282
||||| |||||| | || || |||||||| || |||||||||||||||||||| |||||
Sbjct: 617 caaggagaggatgagggcgacgcgccacgtgctgtccgagtacggcaacatgtcgagcgc 558
Query: 283 ctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggacaggccac 342
|||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 557 ctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgaggacggccacgccac 498
Query: 343 cacgggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcga 402
||| ||||||||| | ||||||||||||||||||||||||||||| || |||||||| ||
Sbjct: 497 caccggcgagggcatggactggggcgtcctcttcggcttcggccccggcctcaccgttga 438
Query: 403 gaccgtcgtgctccacagcgtccccatcaccaccgg 438
||||||||| ||||||||||||||||||||| ||||
Sbjct: 437 gaccgtcgtcctccacagcgtccccatcaccgccgg 402
>gb|CB650192.1|CB650192 OSJNEb14I06.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb14I06 3', mRNA sequence
Length = 681
Score = 319 bits (161), Expect = 1e-084
Identities = 254/285 (89%)
Strand = Plus / Minus
Query: 148 gaactccatcttctgggtggcgcaccccggcgggcccgccatcctcgaccaggtggaggc 207
|||||||||||| ||||||||||||||||| || || || ||||| ||||||||||||||
Sbjct: 681 gaactccatcttatgggtggcgcaccccggaggtccggcgatcctggaccaggtggaggc 622
Query: 208 caaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagtacgg 267
||||| ||||||||||||| |||||| | || || |||||||| || |||||||| ||
Sbjct: 621 gaaggttgggctggacaaggagaggatgagggcgacgcgccacgtgctgtccgagtatgg 562
Query: 268 caacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccga 327
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 561 caacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgctga 502
Query: 328 ggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| || |||||||| ||||||||| | || ||||||||||||||||||||||||||
Sbjct: 501 ggacggccacgccaccaccggcgagggcatggattggggcgtcctcttcggcttcggccc 442
Query: 388 gggactcaccgtcgagaccgtcgtgctccacagcgtccccatcac 432
|| |||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 441 cggcctcaccgttgagacggtcgtcctccacagcgtccccatcac 397
>gb|CB648535.1|CB648535 OSJNEb11P09.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb11P09 3', mRNA sequence
Length = 718
Score = 315 bits (159), Expect = 2e-083
Identities = 228/251 (90%)
Strand = Plus / Minus
Query: 188 atcctcgaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgc 247
||||| |||||||||||||| ||||| ||||||||||||| |||||| | || || |||
Sbjct: 695 atcctggaccaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgc 636
Query: 248 cacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgag 307
||||| || |||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct: 635 cacgtgctgtccgagtacggcaacatgtcgagcgcctgcgtgctcttcatcctcgacgag 576
Query: 308 atgcgcaagcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggc 367
|||||||||||||||||||||||||| || |||||||| ||||||||| | |||||||||
Sbjct: 575 atgcgcaagcgctccgccgaggacggccacgccaccaccggcgagggcatggactggggc 516
Query: 368 gtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccc 427
|||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||
Sbjct: 515 gtcctcttcggcttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtcccc 456
Query: 428 atcaccaccgg 438
|||||| ||||
Sbjct: 455 atcaccgccgg 445
>gb|CB643205.1|CB643205 OSJNEb03M07.r OSJNEb Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEb03M07 3', mRNA sequence
Length = 583
Score = 250 bits (126), Expect = 9e-064
Identities = 204/230 (88%)
Strand = Plus / Minus
Query: 209 aaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagtacggc 268
||||| ||||||||||||| |||||| | || || |||||||| || ||||||||||||
Sbjct: 580 aaggttgggctggacaaggagaggatgagggcgacgcgccacgtgctgtccgagtacggc 521
Query: 269 aacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgag 328
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aacatgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgag 461
Query: 329 gacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccg 388
||||| || |||||||| || |||||| | |||||||||||||||||||| || |||||
Sbjct: 460 gacggccacgccaccaccggtgagggcatggactggggcgtcctcttcggatttggcccc 401
Query: 389 ggactcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccgg 438
|| |||||||| |||||||| || |||||||| |||||||||||| ||||
Sbjct: 400 ggcctcaccgttgagaccgtagtcctccacagagtccccatcaccgccgg 351
>gb|CB680850.1|CB680850 OSJNEf06E21.r OSJNEf Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEf06E21 3', mRNA sequence
Length = 646
Score = 246 bits (124), Expect = 1e-062
Identities = 214/244 (87%)
Strand = Plus / Minus
Query: 195 accaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcc 254
||||||||||||| ||||| ||||||||||||| |||||| | || || |||||||| |
Sbjct: 646 accaggtggaggcgaaggttgggctggacaaggagaggatgagggcgacgcgccacgtgc 587
Query: 255 tctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagatgcgca 314
| |||||||||||||||||||| ||||||||||| | ||||||||||||||||||||||
Sbjct: 586 tgtccgagtacggcaacatgtcgagcgcctgcgtgtttttcatcctcgacgagatgcgca 527
Query: 315 agcgctccgccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctct 374
||||||||||||||||||| || |||||| | ||||||||| | |||||||| ||||| |
Sbjct: 526 agcgctccgccgaggacggccacgccacccccggcgagggcatggactggggggtccttt 467
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacca 434
|||| |||||||| || |||||||| |||||||| || |||||||| ||||||||||||
Sbjct: 466 tcggtttcggccccggcctcaccgttgagaccgttgtcctccacagggtccccatcaccg 407
Query: 435 ccgg 438
||||
Sbjct: 406 ccgg 403
>gb|AU096788.1|AU096788 AU096788 Rice green shoot Oryza sativa (japonica cultivar-group)
cDNA clone S15607, mRNA sequence
Length = 272
Score = 242 bits (122), Expect = 2e-061
Identities = 191/214 (89%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 45 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 104
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 105 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 164
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 165 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 224
Query: 194 gaccaggtggaggccaaggtcgggctggacaagg 227
|||||||||||||| ||||| |||||||||||||
Sbjct: 225 gaccaggtggaggcgaaggttgggctggacaagg 258
>gb|AU066262.1|AU066262 AU066262 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S5939_2A, mRNA sequence
Length = 462
Score = 236 bits (119), Expect = 1e-059
Identities = 315/376 (83%), Gaps = 7/376 (1%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 11 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 70
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
|| || ||||||||||| |||||||||| |||||||||| ||| | || |||||
Sbjct: 71 gtnccggggctcatctcgaagaacatcgagcgcgcgctgg-gnacgtntccacaccgctg 129
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||| ||||| ||||| | ||||| |||||
Sbjct: 130 gggatctcggactggaactccatcttctgggtngcgcaacccgg-agtcccgcgatcctg 188
Query: 194 gaccaggtggaggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtc 253
|||||||| ||||| ||||| ||||| ||||||| ||||| | || | || |||||
Sbjct: 189 gaccaggttgaggcgaaggttgggctngacaaggagaggatnagggcga--cggcacgtn 246
Query: 254 ctctccgagtacggcaacatgtccagcgcctgcg-tcctcttcatcctcgacgagatgcg 312
|| |||||||||||||||||||| |||| || || | |||||||||||||||||||||||
Sbjct: 247 ctgtccgagtacggcaacatgtcgagcgnctncgttgctcttcatcctcgacgagatgcg 306
Query: 313 caagcgctccgccgaggacggacaggccaccacgggcgagggcctcgac-tggggcgtcc 371
||||| | ||||||||||||| || || |||| ||||| ||| | ||| ||||||||||
Sbjct: 307 caagctc-ccgccgaggacggccacgcaaccaacggcganggcattgacttggggcgtcc 365
Query: 372 tcttcggcttcggccc 387
|||||||||| |||||
Sbjct: 366 tcttcggcttgggccc 381
>gb|AU066267.2|AU066267 AU066267 Rice shoot Oryza sativa (japonica cultivar-group) cDNA
clone S5974_1A, mRNA sequence
Length = 241
Score = 236 bits (119), Expect = 1e-059
Identities = 190/214 (88%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 11 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 70
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 71 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 130
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 131 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 190
Query: 194 gaccaggtggaggccaaggtcgggctggacaagg 227
|||||||||||||| ||| | |||||||||||||
Sbjct: 191 gaccaggtggaggcgaagnttgggctggacaagg 224
>gb|CF326068.1|CF326068 JMT1--05-A08.g1 AtJMT-overexpressing transgenic rice lambda phage
cDNA library (JMT1) Oryza sativa (japonica
cultivar-group) cDNA clone JMT1--05-A08, mRNA sequence
Length = 585
Score = 230 bits (116), Expect = 9e-058
Identities = 155/168 (92%)
Strand = Plus / Minus
Query: 271 catgtccagcgcctgcgtcctcttcatcctcgacgagatgcgcaagcgctccgccgagga 330
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 catgtcgagcgcctgcgtgctcttcatcctcgacgagatgcgcaagcgctccgccgagga 526
Query: 331 cggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttcggcccggg 390
||| || |||||||| ||||||||| | ||||||||||||||||||||||||||||| ||
Sbjct: 525 cggccacgccaccaccggcgagggcatggactggggcgtcctcttcggcttcggccccgg 466
Query: 391 actcaccgtcgagaccgtcgtgctccacagcgtccccatcaccaccgg 438
||||| |||||||| ||||| ||||||||||||||||||||| ||||
Sbjct: 465 cctcactgtcgagacggtcgtcctccacagcgtccccatcaccgccgg 418
>gb|CB653703.1|CB653703 OSJNEc04P21.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc04P21 5', mRNA sequence
Length = 568
Score = 222 bits (112), Expect = 2e-055
Identities = 187/212 (88%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 349 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 408
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttcaagccgctc 133
||||| ||||||||||| |||||||||| |||||||||| ||||||||||| |||||
Sbjct: 409 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttcacaccgctg 468
Query: 134 ggcatctccgactggaactccatcttctgggtggcgcaccccggcgggcccgccatcctc 193
|| ||||| ||||||||||||||||||||||||||||||||||| || || || |||||
Sbjct: 469 gggatctcggactggaactccatcttctgggtggcgcaccccggaggtccggcgatcctg 528
Query: 194 gaccaggtggaggccaaggtcgggctggacaa 225
|||||| ||||||| || || |||||||||||
Sbjct: 529 gaccagatggaggcgaatgttgggctggacaa 560
>gb|C23616.1|C23616 C23616 Rice green shoot Oryza sativa (japonica cultivar-group) cDNA
clone S16073_1Z, mRNA sequence
Length = 453
Score = 176 bits (89), Expect = 1e-041
Identities = 196/231 (84%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 204 aggccaaggtcgggctggacaaggccaggatgcgcgccacccgccacgtcctctccgagt 263
|||| ||||| ||| ||||||||| ||||| | || || |||||||| | |||||||
Sbjct: 7 aggcnaaggttgggntggacaaggagaggatnagggcgacgcgccacgtgntgtccgagt 66
Query: 264 acggcaacatgtccagcgcctgcgtcctcttcatcctcgacgagat-gcgcaagcgctcc 322
|||| |||||||| | ||| | ||| ||||| |||||||||||||| ||| |||| |||
Sbjct: 67 acggnaacatgtcgaacgc-tncgtgctcttnatcctcgacgagattgcgaaagcn-tcc 124
Query: 323 gccgaggacggacaggccaccacgggcgagggcctcgactggggcgtcctcttcggcttc 382
||||||||||| | |||||||| ||||||||| | ||||||| ||||||||||||||||
Sbjct: 125 gccgaggacggcnacgccaccaccggcgagggcatggactgggncgtcctcttcggcttc 184
Query: 383 ggcccgggactcaccgtcgagaccgtcgtgctccacagcgtccccatcacc 433
||||| || |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 185 ggccccggcctcaccgttgagaccgtcgtcctccacagcgtccccatcacc 235
>gb|CB659024.1|CB659024 OSJNEc15J15.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc15J15 3', mRNA sequence
Length = 556
Score = 168 bits (85), Expect = 3e-039
Identities = 167/193 (86%), Gaps = 1/193 (0%)
Strand = Plus / Minus
Query: 247 ccacgtcctctccgagtacggcaacatgtccagcgcctgcgtcctcttcatcctcgacga 306
|||||| || ||||||| || ||||||||| ||||| ||||| || ||||||||||||||
Sbjct: 532 ccacgtgctgtccgagttcgccaacatgtcgagcgcgtgcgtgcttttcatcctcgacga 473
Query: 307 gatgcgcaagcgctccgccgagg-acggacaggccaccacgggcgagggcctcgactggg 365
|||||||||||||||||| |||| | || || |||||||| ||||||||| | |||||||
Sbjct: 472 gatgcgcaagcgctccgctgaggtatggccacgccaccaccggcgagggcatggactggg 413
Query: 366 gcgtcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcc 425
||||| | || ||||| ||||| || |||||||| ||||||||||| |||||||| ||||
Sbjct: 412 gcgtcttttttggctttggccccggcctcaccgttgagaccgtcgtcctccacagggtcc 353
Query: 426 ccatcaccaccgg 438
|||||||| ||||
Sbjct: 352 ccatcaccgccgg 340
>gb|CB652646.1|CB652646 OSJNEc02N20.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02N20 5', mRNA sequence
Length = 767
Score = 135 bits (68), Expect = 4e-029
Identities = 101/112 (90%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacctccgcgaggtggggctcaccttccacctgctcaaggac 73
||||||||||||||||||||||| | ||||| ||||| || ||||||||||||||||||
Sbjct: 652 gagggcgccatcgacggccacctgagggaggtcgggctgacgttccacctgctcaaggac 711
Query: 74 gtgcccgggctcatctccaagaacatcggccgcgcgctggacgacgcgttca 125
||||| ||||||||||| |||||||||| |||||||||| |||||||||||
Sbjct: 712 gtgccggggctcatctcgaagaacatcgagcgcgcgctgggcgacgcgttca 763
>gb|CB658978.1|CB658978 OSJNEc15H22.r OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc15H22 3', mRNA sequence
Length = 483
Score = 83.8 bits (42), Expect = 1e-013
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 369 tcctcttcggcttcggcccgggactcaccgtcgagaccgtcgtgctccacagcgtcccca 428
||||||| || |||||||| || |||||||| ||||||||||| ||||||||||||||||
Sbjct: 483 tcctcttagggttcggccccggcctcaccgttgagaccgtcgtcctccacagcgtcccca 424
Query: 429 tcaccaccgg 438
||||| ||||
Sbjct: 423 tcaccgccgg 414
>emb|AL606593.1|OSJN00026 Oryza sativa (japonica cultivar-group) chromosome 4 clone
OSJNBa0082I13, *** SEQUENCING IN PROGRESS ***
Length = 89536
Score = 56.0 bits (28), Expect = 3e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|||||||||||||| ||||| | |||||||||||||| || || |||||||| ||||||
Sbjct: 85344 ggcgagggcctcgagtgggggctgctcttcggcttcgggccaggcctcaccgtggagacc 85285
>dbj|AK100989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145I15, full
insert sequence
Length = 1700
Score = 56.0 bits (28), Expect = 3e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|||||||||||||| ||||| | |||||||||||||| || || |||||||| ||||||
Sbjct: 1319 ggcgagggcctcgagtgggggctgctcttcggcttcgggccaggcctcaccgtggagacc 1378
>ref|XM_470964.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1182
Score = 56.0 bits (28), Expect = 3e-005
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|||||||||||||| ||||| | |||||||||||||| || || |||||||| ||||||
Sbjct: 1078 ggcgagggcctcgagtgggggctgctcttcggcttcgggccaggcctcaccgtggagacc 1137
>ref|NT_107194.1| Oryza sativa (japonica cultivar-group)
Length = 2696338
Score = 56.0 bits (28), Expect = 3e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|||||||||||||| ||||| | |||||||||||||| || || |||||||| ||||||
Sbjct: 249739 ggcgagggcctcgagtgggggctgctcttcggcttcgggccaggcctcaccgtggagacc 249680
>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
complete sequence
Length = 144778
Score = 56.0 bits (28), Expect = 3e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|||||||||||||| ||||| | |||||||||||||| || || |||||||| ||||||
Sbjct: 45559 ggcgagggcctcgagtgggggctgctcttcggcttcgggccaggcctcaccgtggagacc 45500
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
complete sequence
Length = 35498469
Score = 56.0 bits (28), Expect = 3e-005
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 347 ggcgagggcctcgactggggcgtcctcttcggcttcggcccgggactcaccgtcgagacc 406
|||||||||||||| ||||| | |||||||||||||| || || |||||||| ||||||
Sbjct: 249739 ggcgagggcctcgagtgggggctgctcttcggcttcgggccaggcctcaccgtggagacc 249680
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 240 ccacccgccacgtcctctcc 259
||||||||||||||||||||
Sbjct: 7083730 ccacccgccacgtcctctcc 7083749
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0518F01
Length = 154541
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 147160 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 147119
>gb|AACV01001773.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001773, whole
genome shotgun sequence
Length = 63168
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 12757 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 12798
>dbj|BA000010.8| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43342410
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 23763178 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 23763137
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 14331368 catcctcggcgagatgcgcaagatctccggcgagg 14331334
>ref|NM_192650.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1434
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 1373 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 1414
>ref|NT_079926.2| Oryza sativa (japonica cultivar-group)
Length = 8469246
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 6681410 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 6681369
>dbj|AP003330.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1085F01
Length = 163671
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 62165 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 62124
>gb|CH401166.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000003 genomic
scaffold, whole genome shotgun sequence
Length = 8539496
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 6606579 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 6606538
>gb|CM000138.1| Oryza sativa (japonica cultivar-group) chromosome 1, whole genome shotgun
sequence
Length = 42596331
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 23231702 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 23231661
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 14266990 catcctcggcgagatgcgcaagatctccggcgagg 14266956
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 52.0 bits (26), Expect = 4e-004
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 375 tcggcttcggcccgggactcaccgtcgagaccgtcgtgctcc 416
||||||||||||| || |||||||||||||| |||||||||
Sbjct: 23684461 tcggcttcggcccaggcctcaccgtcgagacaatcgtgctcc 23684420
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 14333586 catcctcggcgagatgcgcaagatctccggcgagg 14333552
>gb|AC116369.5| Oryza sativa chromosome 3 BAC OSJNBb0113I20 genomic sequence, complete
sequence
Length = 122939
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 111073 cacccgggcgggcgcgccatcctcgacaaggtggagg 111037
Score = 40.1 bits (20), Expect = 1.7
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 340 caccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| |||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 110917 caccactggcgaggggtgcgagtggggcgttctcctcggcttcggccc 110870
>gb|AC090683.7| Oryza sativa chromosome 3 BAC OSJNBa0035I24 genomic sequence, complete
sequence
Length = 134728
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 109066 cacccgggcgggcgcgccatcctcgacaaggtggagg 109102
Score = 40.1 bits (20), Expect = 1.7
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 340 caccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| |||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 109222 caccactggcgaggggtgcgagtggggcgttctcctcggcttcggccc 109269
>gb|AACV01007620.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg007620, whole
genome shotgun sequence
Length = 6808
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 2664 cacccgggcgggcgcgccatcctcgacaaggtggagg 2700
Score = 40.1 bits (20), Expect = 1.7
Identities = 41/48 (85%)
Strand = Plus / Plus
Query: 340 caccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| |||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 2820 caccactggcgaggggtgcgagtggggcgttctcctcggcttcggccc 2867
>ref|XM_469239.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 417
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 295 cacccgggcgggcgcgccatcctcgacaaggtggagg 331
>ref|NT_079919.2| Oryza sativa (japonica cultivar-group)
Length = 740491
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 264252 cacccgggcgggcgcgccatcctcgacaaggtggagg 264216
Score = 40.1 bits (20), Expect = 1.7
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 340 caccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| |||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 264096 caccactggcgaggggtgcgagtggggcgttctcctcggcttcggccc 264049
>gb|CH401176.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000013
genomic scaffold, whole genome shotgun sequence
Length = 9810738
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 100313 cacccgggcgggcgcgccatcctcgacaaggtggagg 100277
Score = 40.1 bits (20), Expect = 1.7
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 340 caccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| |||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 100157 caccactggcgaggggtgcgagtggggcgttctcctcggcttcggccc 100110
>gb|CM000140.1| Oryza sativa (japonica cultivar-group) chromosome 3, whole genome shotgun
sequence
Length = 37803064
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 27366476 cacccgggcgggcgcgccatcctcgacaaggtggagg 27366440
Score = 40.1 bits (20), Expect = 1.7
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 340 caccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| |||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 27366320 caccactggcgaggggtgcgagtggggcgttctcctcggcttcggccc 27366273
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 21 ccatcgacggccacctccgcgag 43
||||||||||| |||||||||||
Sbjct: 15638334 ccatcgacggcgacctccgcgag 15638356
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 26372923 cacccgggcgggcgcgccatcctcgacaaggtggagg 26372887
Score = 40.1 bits (20), Expect = 1.7
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 340 caccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| |||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 26372767 caccactggcgaggggtgcgagtggggcgttctcctcggcttcggccc 26372720
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 21 ccatcgacggccacctccgcgag 43
||||||||||| |||||||||||
Sbjct: 14969192 ccatcgacggcgacctccgcgag 14969214
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 50.1 bits (25), Expect = 0.002
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 170 caccccggcgggcccgccatcctcgaccaggtggagg 206
||||| ||||||| ||||||||||||| |||||||||
Sbjct: 26281574 cacccgggcgggcgcgccatcctcgacaaggtggagg 26281538
Score = 40.1 bits (20), Expect = 1.7
Identities = 41/48 (85%)
Strand = Plus / Minus
Query: 340 caccacgggcgagggcctcgactggggcgtcctcttcggcttcggccc 387
|||||| |||||||| ||| |||||||| ||| |||||||||||||
Sbjct: 26281418 caccactggcgaggggtgcgagtggggcgttctcctcggcttcggccc 26281371
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 21 ccatcgacggccacctccgcgag 43
||||||||||| |||||||||||
Sbjct: 14974658 ccatcgacggcgacctccgcgag 14974680
>gb|CB652644.1|CB652644 OSJNEc02N19.f OSJNEc Oryza sativa (japonica cultivar-group) cDNA
clone OSJNEc02N19 5', mRNA sequence
Length = 670
Score = 46.1 bits (23), Expect = 0.028
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 14 gagggcgccatcgacggccacct 36
|||||||||||||||||||||||
Sbjct: 648 gagggcgccatcgacggccacct 670
>dbj|AP004167.1| Oryza sativa (japonica cultivar-group) chromosome 2 clone OJ1674_E08,
*** SEQUENCING IN PROGRESS ***
Length = 119048
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 568 tgatactatttttccatgta 587
||||||||||||||||||||
Sbjct: 10946 tgatactatttttccatgta 10965
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0496E03
Length = 138622
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 568 tgatactatttttccatgta 587
||||||||||||||||||||
Sbjct: 9146 tgatactatttttccatgta 9127
>dbj|AP006438.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBa0030C08
Length = 163423
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 568 tgatactatttttccatgta 587
||||||||||||||||||||
Sbjct: 96848 tgatactatttttccatgta 96829
>gb|AACV01004871.1| Oryza sativa (japonica cultivar-group) chromosome 2 Ctg004871, whole
genome shotgun sequence
Length = 38754
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 568 tgatactatttttccatgta 587
||||||||||||||||||||
Sbjct: 13311 tgatactatttttccatgta 13292
>ref|NT_107203.1| Oryza sativa (japonica cultivar-group)
Length = 2359875
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 240 ccacccgccacgtcctctcc 259
||||||||||||||||||||
Sbjct: 1784580 ccacccgccacgtcctctcc 1784599
>ref|NT_107180.1| Oryza sativa (japonica cultivar-group)
Length = 6019143
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 568 tgatactatttttccatgta 587
||||||||||||||||||||
Sbjct: 5059424 tgatactatttttccatgta 5059405
>gb|CH401170.1| Oryza sativa (japonica cultivar-group) chromosome 2 scaffold000007 genomic
scaffold, whole genome shotgun sequence
Length = 22563205
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 568 tgatactatttttccatgta 587
||||||||||||||||||||
Sbjct: 10168814 tgatactatttttccatgta 10168795
>gb|CM000139.1| Oryza sativa (japonica cultivar-group) chromosome 2, whole genome shotgun
sequence
Length = 36016269
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 568 tgatactatttttccatgta 587
||||||||||||||||||||
Sbjct: 23621878 tgatactatttttccatgta 23621859
>emb|AL606590.3|OSJN00031 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0052O21,
complete sequence
Length = 166475
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 240 ccacccgccacgtcctctcc 259
||||||||||||||||||||
Sbjct: 104921 ccacccgccacgtcctctcc 104940
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 40.1 bits (20), Expect = 1.7
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 568 tgatactatttttccatgta 587
||||||||||||||||||||
Sbjct: 23875182 tgatactatttttccatgta 23875163
>dbj|AK069415.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E02, full
insert sequence
Length = 2152
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 148 aggacgtgctcgggctcatctcc 170
>dbj|AK099227.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091I23, full
insert sequence
Length = 2076
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 131 aggacgtgctcgggctcatctcc 153
>gb|AC084022.10| Oryza sativa chromosome 3 BAC OSJNBa0011H24 genomic sequence, complete
sequence
Length = 137184
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 21 ccatcgacggccacctccgcgag 43
||||||||||| |||||||||||
Sbjct: 68104 ccatcgacggcgacctccgcgag 68082
>dbj|AP003909.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OJ1300_E01
Length = 103022
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 41280 aggacgtgctcgggctcatctcc 41258
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0710F09
Length = 198867
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 89587 ttctgggcggtgcaccccggcgggccggcgatcct 89553
>gb|AC135568.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0078F08,
complete sequence
Length = 165440
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || |||||||||||||| ||| |||||
Sbjct: 156907 ttctgggcggtgcaccccggcgggcgcgcgatcct 156873
>dbj|AP003207.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1157F09
Length = 148802
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 84863 catcctcggcgagatgcgcaagatctccggcgagg 84829
>gb|AACV01001056.1| Oryza sativa (japonica cultivar-group) chromosome 1 Ctg001056,
whole genome shotgun sequence
Length = 63540
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 277 catcctcggcgagatgcgcaagatctccggcgagg 311
>gb|AACV01006750.1| Oryza sativa (japonica cultivar-group) chromosome 3 Ctg006750, whole
genome shotgun sequence
Length = 55341
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 21 ccatcgacggccacctccgcgag 43
||||||||||| |||||||||||
Sbjct: 46249 ccatcgacggcgacctccgcgag 46271
>gb|AACV01014936.1| Oryza sativa (japonica cultivar-group) chromosome 6 Ctg014936, whole
genome shotgun sequence
Length = 39368
Score = 38.2 bits (19), Expect = 6.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 418 cagcgtccccatcaccacc 436
|||||||||||||||||||
Sbjct: 26577 cagcgtccccatcaccacc 26595
>gb|AACV01015871.1| Oryza sativa (japonica cultivar-group) chromosome 7 Ctg015871, whole
genome shotgun sequence
Length = 9612
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 4152 ttctgggcggtgcaccccggcgggccggcgatcct 4186
>gb|AACV01017100.1| Oryza sativa (japonica cultivar-group) chromosome 8 Ctg017100, whole
genome shotgun sequence
Length = 26249
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 9567 aggacgtgctcgggctcatctcc 9545
>gb|AACV01023276.1| Oryza sativa (japonica cultivar-group) chromosome 11 Ctg023276, whole
genome shotgun sequence
Length = 8278
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || |||||||||||||| ||| |||||
Sbjct: 3805 ttctgggcggtgcaccccggcgggcgcgcgatcct 3839
>ref|NM_187818.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 1218
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 922 ttctgggcggtgcaccccggcgggccggcgatcct 956
>ref|NM_193977.1| Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 4446
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 2136 catcctcggcgagatgcgcaagatctccggcgagg 2170
>ref|XM_479686.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 2076
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 131 aggacgtgctcgggctcatctcc 153
>ref|XM_480314.1| Oryza sativa (japonica cultivar-group), mRNA
Length = 303
Score = 38.2 bits (19), Expect = 6.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 418 cagcgtccccatcaccacc 436
|||||||||||||||||||
Sbjct: 117 cagcgtccccatcaccacc 135
>ref|NT_079854.2| Oryza sativa (japonica cultivar-group)
Length = 2592259
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 21 ccatcgacggccacctccgcgag 43
||||||||||| |||||||||||
Sbjct: 1365290 ccatcgacggcgacctccgcgag 1365312
>ref|NT_079961.2| Oryza sativa (japonica cultivar-group)
Length = 3480660
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 2840593 catcctcggcgagatgcgcaagatctccggcgagg 2840559
>ref|XM_507085.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1300_E01.9 mRNA
Length = 2152
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 148 aggacgtgctcgggctcatctcc 170
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
clone:OSJNBa0054L03
Length = 183623
Score = 38.2 bits (19), Expect = 6.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 418 cagcgtccccatcaccacc 436
|||||||||||||||||||
Sbjct: 45879 cagcgtccccatcaccacc 45897
>ref|NT_079899.2| Oryza sativa (japonica cultivar-group)
Length = 17249721
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 612126 ttctgggcggtgcaccccggcgggccggcgatcct 612092
>ref|NT_107239.1| Oryza sativa (japonica cultivar-group)
Length = 28196693
Score = 38.2 bits (19), Expect = 6.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 418 cagcgtccccatcaccacc 436
|||||||||||||||||||
Sbjct: 4050611 cagcgtccccatcaccacc 4050629
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 41280 aggacgtgctcgggctcatctcc 41258
>gb|CH401228.1| Oryza sativa (japonica cultivar-group) chromosome 8 scaffold000065
genomic scaffold, whole genome shotgun sequence
Length = 5026603
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 279515 aggacgtgctcgggctcatctcc 279493
>gb|CH401223.1| Oryza sativa (japonica cultivar-group) chromosome 7 scaffold000060
genomic scaffold, whole genome shotgun sequence
Length = 1552265
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 158 ttctgggtggcgcaccccggcgggcccgccatcct 192
||||||| || ||||||||||||||| || |||||
Sbjct: 606571 ttctgggcggtgcaccccggcgggccggcgatcct 606537
>gb|CH401216.1| Oryza sativa (japonica cultivar-group) chromosome 6 scaffold000053 genomic
scaffold, whole genome shotgun sequence
Length = 12033173
Score = 38.2 bits (19), Expect = 6.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 418 cagcgtccccatcaccacc 436
|||||||||||||||||||
Sbjct: 11439207 cagcgtccccatcaccacc 11439225
>gb|CH401174.1| Oryza sativa (japonica cultivar-group) chromosome 3 scaffold000011 genomic
scaffold, whole genome shotgun sequence
Length = 12704415
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 21 ccatcgacggccacctccgcgag 43
||||||||||| |||||||||||
Sbjct: 1587627 ccatcgacggcgacctccgcgag 1587649
>gb|CH401165.1| Oryza sativa (japonica cultivar-group) chromosome 1 scaffold000002 genomic
scaffold, whole genome shotgun sequence
Length = 5008528
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Minus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 2650495 catcctcggcgagatgcgcaagatctccggcgagg 2650461
>gb|CM000145.1| Oryza sativa (japonica cultivar-group) chromosome 8, whole genome shotgun
sequence
Length = 27103171
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 279515 aggacgtgctcgggctcatctcc 279493
>gb|CM000143.1| Oryza sativa (japonica cultivar-group) chromosome 6, whole genome shotgun
sequence
Length = 29740507
Score = 38.2 bits (19), Expect = 6.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 418 cagcgtccccatcaccacc 436
|||||||||||||||||||
Sbjct: 29137944 cagcgtccccatcaccacc 29137962
>emb|AJ535074.1|OSA535074 Oryza sativa (japonica cultivar-group) mrp8 gene for MRP-like ABC
transporter, exons 1-11
Length = 16621
Score = 38.2 bits (19), Expect = 6.7
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 295 catcctcgacgagatgcgcaagcgctccgccgagg 329
|||||||| ||||||||||||| ||||| |||||
Sbjct: 6538 catcctcggcgagatgcgcaagatctccggcgagg 6572
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
sequence
Length = 28434780
Score = 38.2 bits (19), Expect = 6.7
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 418 cagcgtccccatcaccacc 436
|||||||||||||||||||
Sbjct: 4283085 cagcgtccccatcaccacc 4283103
Score = 38.2 bits (19), Expect = 6.7
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 69 aggacgtgcccgggctcatctcc 91
||||||||| |||||||||||||
Sbjct: 274854 aggacgtgctcgggctcatctcc 274832
Database: Oryza_nucl_with_EST.fasta
Posted date: May 2, 2006 3:04 PM
Number of letters in database: 2,800,419,916
Number of sequences in database: 438,736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,357,628
Number of Sequences: 438736
Number of extensions: 1357628
Number of successful extensions: 8318
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7573
Number of HSP's gapped (non-prelim): 731
length of query: 761
length of database: 2,800,419,916
effective HSP length: 21
effective length of query: 740
effective length of database: 2,791,206,460
effective search space: 2065492780400
effective search space used: 2065492780400
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)