BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192701.2.2
(654 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV917194.1|AV917194 AV917194 K. Sato unpublished cDNA li... 200 4e-050
gb|BQ458826.1|BQ458826 HA04B17r HA Hordeum vulgare subsp. v... 200 4e-050
gb|BQ656545.1|BQ656545 HA04B17u HA Hordeum vulgare subsp. v... 200 4e-050
gb|BU985820.1|BU985820 HF08L16r HF Hordeum vulgare subsp. v... 200 4e-050
gb|BU995569.1|BU995569 HM10K10r HM Hordeum vulgare subsp. v... 200 4e-050
gb|CB879942.1|CB879942 HM05A07w HM Hordeum vulgare subsp. v... 200 4e-050
gb|CB881728.1|CB881728 HM10L09w HM Hordeum vulgare subsp. v... 200 4e-050
gb|BM099601.2|BM099601 EBes01_SQ003_L13_R embryo sac, 4-6 D... 196 6e-049
gb|AJ462863.1|AJ462863 AJ462863 S00002 Hordeum vulgare subs... 94 7e-018
gb|AJ462864.1|AJ462864 AJ462864 S00002 Hordeum vulgare subs... 68 4e-010
gb|BF630057.2|BF630057 HVSMEb0007N02f Hordeum vulgare seedl... 50 9e-005
gb|BU993996.1|BU993996 HM05E23r HM Hordeum vulgare subsp. v... 50 9e-005
gb|AL450503.1|AL450503 AL450503 Hordeum vulgare Barke etiol... 48 4e-004
gb|BG301215.1|BG301215 HVSMEb0019P12f Hordeum vulgare seedl... 48 4e-004
gb|BF257955.3|BF257955 HVSMEf0014F11f Hordeum vulgare seedl... 48 4e-004
gb|CB877073.1|CB877073 HP03H14T HP Hordeum vulgare subsp. v... 48 4e-004
gb|BF256616.2|BF256616 HVSMEf0010I02f Hordeum vulgare seedl... 46 0.001
gb|BQ463185.1|BQ463185 HI04F06r HI Hordeum vulgare subsp. v... 46 0.001
gb|BM373780.2|BM373780 EBma03_SQ002_K17_R maternal, 8 DPA, ... 46 0.001
gb|BQ764244.1|BQ764244 EBan01_SQ005_E09 _R anther, yellow s... 46 0.001
gb|BQ764810.1|BQ764810 EBca01_SQ004_P23_R carpel, pre-anthe... 46 0.001
gb|BU984777.1|BU984777 HF04P16r HF Hordeum vulgare subsp. v... 46 0.001
gb|CA011989.1|CA011989 HT04B22r HT Hordeum vulgare subsp. v... 46 0.001
gb|CA026368.1|CA026368 HZ55L12r HZ Hordeum vulgare subsp. v... 46 0.001
gb|CA032334.1|CA032334 HX12L10r HX Hordeum vulgare subsp. v... 46 0.001
gb|AL508266.1|AL508266 AL508266 Hordeum vulgare Barke devel... 44 0.006
gb|BM376540.1|BM376540 EBem05_SQ002_I08_R embryo, 14 DPA, n... 44 0.006
gb|BM377054.1|BM377054 EBem05_SQ003_P19_R embryo, 14 DPA, n... 44 0.006
gb|BQ465618.1|BQ465618 HU04C24r HU Hordeum vulgare subsp. v... 44 0.006
gb|BQ471005.1|BQ471005 HX04L01r HX Hordeum vulgare subsp. v... 44 0.006
gb|BQ665683.1|BQ665683 HX04L01u HX Hordeum vulgare subsp. v... 44 0.006
gb|BM372892.2|BM372892 EBma04_SQ002_E17_R maternal, 10 DPA,... 44 0.006
gb|BQ757990.1|BQ757990 EBem10_SQ005_P01_R embryo, 2 Day ger... 44 0.006
gb|BQ763457.1|BQ763457 EBro02_SQ008_M12_R root, 3 week, hyd... 44 0.006
gb|BQ763923.1|BQ763923 EBro03_SQ005_D22_R root, 3 week, wat... 44 0.006
gb|BQ764148.1|BQ764148 EBan01_SQ005_A06_R anther, yellow st... 44 0.006
gb|BU979275.1|BU979275 HA15K10r HA Hordeum vulgare subsp. v... 44 0.006
gb|BU979313.1|BU979313 HA15M05r HA Hordeum vulgare subsp. v... 44 0.006
gb|BU994229.1|BU994229 HM06D21r HM Hordeum vulgare subsp. v... 44 0.006
gb|BU996052.1|BU996052 HM12E08r HM Hordeum vulgare subsp. v... 44 0.006
gb|CA002728.1|CA002728 HS08F17r HS Hordeum vulgare subsp. v... 44 0.006
gb|CA003577.1|CA003577 HS14O14r HS Hordeum vulgare subsp. v... 44 0.006
gb|CA022199.1|CA022199 HZ42H02r HZ Hordeum vulgare subsp. v... 44 0.006
gb|CB883682.1|CB883682 HQ02P14w HQ Hordeum vulgare subsp. v... 44 0.006
gb|CV061325.1|CV061325 BNEL67e4 Barley EST endosperm librar... 44 0.006
gb|CK124048.1|CK124048 BES1824106k10 BES1824 Hordeum vulgar... 44 0.006
gb|CK125324.1|CK125324 BES1824107l03 BES1824 Hordeum vulgar... 44 0.006
gb|AL510227.1|AL510227 AL510227 Hordeum vulgare Barke devel... 42 0.022
gb|BF622478.2|BF622478 HVSMEa0004I06f Hordeum vulgare seedl... 42 0.022
gb|BG299533.1|BG299533 HVSMEa0020J23f Hordeum vulgare seedl... 42 0.022
gb|BG299697.1|BG299697 HVSMEa0021G21f Hordeum vulgare seedl... 42 0.022
gb|BG300066.1|BG300066 HVSMEb0011D21f Hordeum vulgare seedl... 42 0.022
gb|BF257071.2|BF257071 HVSMEf0011M11f Hordeum vulgare seedl... 42 0.022
gb|BE602041.2|BE602041 HVSMEh0102C13f Hordeum vulgare 5-45 ... 42 0.022
gb|BI953640.1|BI953640 HVSMEm0013K18f Hordeum vulgare green... 42 0.022
gb|BI954660.1|BI954660 HVSMEm0019B20f Hordeum vulgare green... 42 0.022
gb|BI957087.1|BI957087 HVSMEn0007F22f Hordeum vulgare rachi... 42 0.022
gb|BE214409.1|BE214409 HV_CEb0003F24f Hordeum vulgare seedl... 42 0.022
gb|BF267114.1|BF267114 HV_CEa0016P21f Hordeum vulgare seedl... 42 0.022
gb|BE216187.2|BE216187 HV_CEb0009M03f Hordeum vulgare seedl... 42 0.022
gb|BI958927.1|BI958927 HVSMEn0017E09f Hordeum vulgare rachi... 42 0.022
gb|BF620700.3|BF620700 HVSMEc0020J23f Hordeum vulgare seedl... 42 0.022
gb|BF264651.3|BF264651 HV_CEa0009P24f Hordeum vulgare seedl... 42 0.022
gb|BE214044.2|BE214044 HV_CEb0001P23f Hordeum vulgare seedl... 42 0.022
gb|BQ464033.1|BQ464033 HF01C17T HF Hordeum vulgare subsp. v... 42 0.022
gb|BQ467311.1|BQ467311 HS03F21r HS Hordeum vulgare subsp. v... 42 0.022
gb|BQ757991.1|BQ757991 EBem10_SQ005_P02_R embryo, 2 Day ger... 42 0.022
gb|BQ760296.1|BQ760296 EBpi07_SQ003_G23_R pistil, 12 DPA, n... 42 0.022
gb|BU989814.1|BU989814 HF22M09r HF Hordeum vulgare subsp. v... 42 0.022
gb|BU996233.1|BU996233 HM12P08r HM Hordeum vulgare subsp. v... 42 0.022
gb|BU999017.1|BU999017 HI12O16r HI Hordeum vulgare subsp. v... 42 0.022
gb|BU999120.1|BU999120 HI13F05r HI Hordeum vulgare subsp. v... 42 0.022
gb|BU999802.1|BU999802 HI15O01r HI Hordeum vulgare subsp. v... 42 0.022
gb|BU999804.1|BU999804 HI15O03r HI Hordeum vulgare subsp. v... 42 0.022
gb|CA003273.1|CA003273 HS09O21r HS Hordeum vulgare subsp. v... 42 0.022
gb|CA024310.1|CA024310 HZ48P06r HZ Hordeum vulgare subsp. v... 42 0.022
gb|CA025698.1|CA025698 HZ52O09r HZ Hordeum vulgare subsp. v... 42 0.022
gb|CA028566.1|CA028566 HZ62H03r HZ Hordeum vulgare subsp. v... 42 0.022
gb|CB883070.1|CB883070 HQ01B15w HQ Hordeum vulgare subsp. v... 42 0.022
gb|CV055320.1|CV055320 BNEL119c2 Barley EST endosperm libra... 42 0.022
gb|CV057474.1|CV057474 BNEL28c2 Barley EST endosperm librar... 42 0.022
gb|CV057581.1|CV057581 BNEL29d8 Barley EST endosperm librar... 42 0.022
gb|CV060155.1|CV060155 BNEL55a5 Barley EST endosperm librar... 42 0.022
gb|CV060429.1|CV060429 BNEL58a5 Barley EST endosperm librar... 42 0.022
gb|CV061158.1|CV061158 BNEL65f10 Barley EST endosperm libra... 42 0.022
gb|CV062163.1|CV062163 BNEL77a3 Barley EST endosperm librar... 42 0.022
gb|CV062189.1|CV062189 BNEL77c7 Barley EST endosperm librar... 42 0.022
gb|CV062392.1|CV062392 BNEL79e6 Barley EST endosperm librar... 42 0.022
gb|AL503228.1|AL503228 AL503228 Hordeum vulgare Barke roots... 40 0.089
gb|AL503322.1|AL503322 AL503322 Hordeum vulgare Barke roots... 40 0.089
gb|AL507256.1|AL507256 AL507256 Hordeum vulgare Barke devel... 40 0.089
gb|AL507446.1|AL507446 AL507446 Hordeum vulgare Barke devel... 40 0.089
gb|AL507741.1|AL507741 AL507741 Hordeum vulgare Barke devel... 40 0.089
gb|BF621870.2|BF621870 HVSMEa0001C13f Hordeum vulgare seedl... 40 0.089
gb|BG299524.2|BG299524 HVSMEa0020J08f Hordeum vulgare seedl... 40 0.089
gb|BF263367.2|BF263367 HV_CEa0006I24f Hordeum vulgare seedl... 40 0.089
gb|BG417022.1|BG417022 HVSMEk0015L19f Hordeum vulgare testa... 40 0.089
gb|BI958692.1|BI958692 HVSMEn0016E01f Hordeum vulgare rachi... 40 0.089
gb|BI959236.1|BI959236 HVSMEn0018M18f Hordeum vulgare rachi... 40 0.089
gb|BF626796.3|BF626796 HVSMEb0001F19f Hordeum vulgare seedl... 40 0.089
gb|BE060645.3|BE060645 HVSMEg0012N20f Hordeum vulgare pre-a... 40 0.089
gb|BG417399.2|BG417399 HVSMEk0017D09f Hordeum vulgare testa... 40 0.089
gb|BM368366.1|BM368366 EBed01_SQ002_P03_R endosperm, 6 DPA,... 40 0.089
gb|BJ464138.1|BJ464138 BJ464138 K. Sato unpublished cDNA li... 40 0.089
gb|BQ459077.1|BQ459077 HA02G08r HA Hordeum vulgare subsp. v... 40 0.089
gb|BQ460308.1|BQ460308 HA06K06r HA Hordeum vulgare subsp. v... 40 0.089
gb|BQ460647.1|BQ460647 HA06F14r HA Hordeum vulgare subsp. v... 40 0.089
gb|BQ462948.1|BQ462948 HI02I10r HI Hordeum vulgare subsp. v... 40 0.089
gb|BQ463476.1|BQ463476 HI05G07r HI Hordeum vulgare subsp. v... 40 0.089
gb|BQ467325.1|BQ467325 HS03G14r HS Hordeum vulgare subsp. v... 40 0.089
gb|BQ469404.1|BQ469404 HM04I06r HM Hordeum vulgare subsp. v... 40 0.089
gb|BQ469524.1|BQ469524 HZ01B03r HZ Hordeum vulgare subsp. v... 40 0.089
gb|BQ470259.1|BQ470259 HX02E23r HX Hordeum vulgare subsp. v... 40 0.089
gb|BQ470610.1|BQ470610 HX03H21r HX Hordeum vulgare subsp. v... 40 0.089
gb|BQ470825.1|BQ470825 HX04C11r HX Hordeum vulgare subsp. v... 40 0.089
gb|BQ471049.1|BQ471049 HX04N02r HX Hordeum vulgare subsp. v... 40 0.089
gb|BQ665146.1|BQ665146 HX02E23u HX Hordeum vulgare subsp. v... 40 0.089
gb|BQ665559.1|BQ665559 HX04C11u HX Hordeum vulgare subsp. v... 40 0.089
gb|BQ665771.1|BQ665771 HZ01B03u HZ Hordeum vulgare subsp. v... 40 0.089
gb|BM377951.2|BM377951 EBem04_SQ004_L03_R embryo, 12 DPA, n... 40 0.089
gb|BI776662.2|BI776662 EBpi07_SQ001_F02_R pistil, 12 DPA, n... 40 0.089
gb|BI778972.2|BI778972 EBro01_SQ002_F20_R root, 3 week, hyd... 40 0.089
gb|BQ760656.1|BQ760656 EBro03_SQ003_B18_R root, 3 week, wat... 40 0.089
gb|BQ767150.1|BQ767150 EBro08_SQ008_I03_R root, 3 week, dro... 40 0.089
gb|BQ767540.1|BQ767540 EBro08_SQ009_N03_R root, 3 week, dro... 40 0.089
gb|BQ767886.1|BQ767886 EBro08_SQ010_I04_R root, 3 week, dro... 40 0.089
gb|BU968732.1|BU968732 HB08G18r BC Hordeum vulgare subsp. v... 40 0.089
gb|BU970544.1|BU970544 HB14P12r BC Hordeum vulgare subsp. v... 40 0.089
gb|BU972290.1|BU972290 HB21D16r BC Hordeum vulgare subsp. v... 40 0.089
gb|BU974627.1|BU974627 HB28J04r BC Hordeum vulgare subsp. v... 40 0.089
gb|BU976491.1|BU976491 HA03M19r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU976492.1|BU976492 HA03M19u HA Hordeum vulgare subsp. v... 40 0.089
gb|BU977012.1|BU977012 HA10L02r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU979503.1|BU979503 HA16G01r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU979961.1|BU979961 HA17P11r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU980095.1|BU980095 HA18I17r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU981279.1|BU981279 HA23C10r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU981456.1|BU981456 HA23K20r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU982283.1|BU982283 HA26A23r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU983237.1|BU983237 HA28P24r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU983962.1|BU983962 HA31J05r HA Hordeum vulgare subsp. v... 40 0.089
gb|BU994404.1|BU994404 HM06P09r HM Hordeum vulgare subsp. v... 40 0.089
gb|BU996012.1|BU996012 HM12C01r HM Hordeum vulgare subsp. v... 40 0.089
gb|CA000551.1|CA000551 HS07L09u HS Hordeum vulgare subsp. v... 40 0.089
gb|CA007320.1|CA007320 HU07I17r HU Hordeum vulgare subsp. v... 40 0.089
gb|CA008616.1|CA008616 HU11I16r HU Hordeum vulgare subsp. v... 40 0.089
gb|CA011544.1|CA011544 HT05G03u HT Hordeum vulgare subsp. v... 40 0.089
gb|CA012419.1|CA012419 HT05G03r HT Hordeum vulgare subsp. v... 40 0.089
gb|CA013042.1|CA013042 HT07D17r HT Hordeum vulgare subsp. v... 40 0.089
gb|CA018273.1|CA018273 HV08C06r HV Hordeum vulgare subsp. v... 40 0.089
gb|CA019458.1|CA019458 HV12A24r HV Hordeum vulgare subsp. v... 40 0.089
gb|CA020381.1|CA020381 HZ36C03r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA020848.1|CA020848 HZ38A18r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA021088.1|CA021088 HZ39B05r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA021503.1|CA021503 HZ40E16r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA021861.1|CA021861 HZ41F24r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA022107.1|CA022107 HZ42C23r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA022633.1|CA022633 HZ43O12r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA022878.1|CA022878 HZ44J20r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA023021.1|CA023021 HZ45A05r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA023467.1|CA023467 HZ46F10r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA027732.1|CA027732 HZ59N15r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA028041.1|CA028041 HZ60N02r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA028114.1|CA028114 HZ61A15r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA028381.1|CA028381 HZ61M24r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA029500.1|CA029500 HZ65G11r HZ Hordeum vulgare subsp. v... 40 0.089
gb|CA029958.1|CA029958 HX05L04r HX Hordeum vulgare subsp. v... 40 0.089
gb|CA029974.1|CA029974 HX05L20r HX Hordeum vulgare subsp. v... 40 0.089
gb|CA030027.1|CA030027 HX05O01r HX Hordeum vulgare subsp. v... 40 0.089
gb|CA030193.1|CA030193 HX06F16r HX Hordeum vulgare subsp. v... 40 0.089
gb|CA030454.1|CA030454 HX07B22r HX Hordeum vulgare subsp. v... 40 0.089
gb|CA031179.1|CA031179 HX09D19r HX Hordeum vulgare subsp. v... 40 0.089
gb|CA032352.1|CA032352 HX12M06r HX Hordeum vulgare subsp. v... 40 0.089
gb|CA032537.1|CA032537 HX13F10r HX Hordeum vulgare subsp. v... 40 0.089
gb|CA032663.1|CA032663 HX13N05r HX Hordeum vulgare subsp. v... 40 0.089
gb|CB874578.1|CB874578 HX05L04w HX Hordeum vulgare subsp. v... 40 0.089
gb|CB874594.1|CB874594 HX05L20w HX Hordeum vulgare subsp. v... 40 0.089
gb|CB874637.1|CB874637 HX05O01w HX Hordeum vulgare subsp. v... 40 0.089
gb|CB875746.1|CB875746 HX09D19w HX Hordeum vulgare subsp. v... 40 0.089
gb|CB876591.1|CB876591 HX11M06w HX Hordeum vulgare subsp. v... 40 0.089
gb|CB876888.1|CB876888 HP02M11T HP Hordeum vulgare subsp. v... 40 0.089
gb|CB878051.1|CB878051 HP07C16T HP Hordeum vulgare subsp. v... 40 0.089
gb|CB879574.1|CB879574 HP02M11w HP Hordeum vulgare subsp. v... 40 0.089
gb|CB880575.1|CB880575 HM06P09w HM Hordeum vulgare subsp. v... 40 0.089
gb|CB882663.1|CB882663 HL02I04w HL Hordeum vulgare subsp. v... 40 0.089
gb|CB883134.1|CB883134 HQ01E22w HQ Hordeum vulgare subsp. v... 40 0.089
gb|CB883546.1|CB883546 HQ02J07w HQ Hordeum vulgare subsp. v... 40 0.089
gb|CV053967.1|CV053967 BNEL105c10 Barley EST endosperm libr... 40 0.089
gb|CV054090.1|CV054090 BNEL106f2 Barley EST endosperm libra... 40 0.089
gb|CV055356.1|CV055356 BNEL119f9 Barley EST endosperm libra... 40 0.089
gb|CV060920.1|CV060920 BNEL62g6 Barley EST endosperm librar... 40 0.089
gb|CK122934.1|CK122934 BES1824101e20 BES1824 Hordeum vulgar... 40 0.089
gb|CK123864.1|CK123864 BES1824105n20 BES1824 Hordeum vulgar... 40 0.089
gb|CK125619.1|CK125619 BES1824109e02 BES1824 Hordeum vulgar... 40 0.089
gb|AY500822.1| Hordeum vulgare subsp. vulgare RNA-directed ... 40 0.089
gb|AL503598.1|AL503598 AL503598 Hordeum vulgare Barke roots... 38 0.35
gb|AL503902.1|AL503902 AL503902 Hordeum vulgare Barke roots... 38 0.35
gb|AL507777.1|AL507777 AL507777 Hordeum vulgare Barke devel... 38 0.35
gb|BF623425.2|BF623425 HVSMEa0002B01f Hordeum vulgare seedl... 38 0.35
gb|BF623437.2|BF623437 HVSMEa0002B13f Hordeum vulgare seedl... 38 0.35
gb|BF621738.2|BF621738 HVSMEa0012D15f Hordeum vulgare seedl... 38 0.35
gb|BF618890.2|BF618890 HVSMEc0008E09f Hordeum vulgare seedl... 38 0.35
gb|BF616802.2|BF616802 HVSMEc0012M16f Hordeum vulgare seedl... 38 0.35
gb|BF620372.2|BF620372 HVSMEc0019K08f Hordeum vulgare seedl... 38 0.35
gb|BF256379.2|BF256379 HVSMEf0009H01f Hordeum vulgare seedl... 38 0.35
gb|BI946880.1|BI946880 HVSMEl0002K05f Hordeum vulgare spike... 38 0.35
gb|BI952230.1|BI952230 HVSMEm0005D01f Hordeum vulgare green... 38 0.35
gb|BI957414.1|BI957414 HVSMEn0009H01f Hordeum vulgare rachi... 38 0.35
gb|BF262259.2|BF262259 HV_CEa0003E10f Hordeum vulgare seedl... 38 0.35
gb|BF264144.2|BF264144 HV_CEa0008K08f Hordeum vulgare seedl... 38 0.35
gb|BF267376.2|BF267376 HV_CEa0017L22f Hordeum vulgare seedl... 38 0.35
gb|BI958512.1|BI958512 HVSMEn0015G03f Hordeum vulgare rachi... 38 0.35
gb|BF626697.3|BF626697 HVSMEb0001B17f Hordeum vulgare seedl... 38 0.35
gb|BF630807.3|BF630807 HVSMEb0014B21f Hordeum vulgare seedl... 38 0.35
gb|BE454937.2|BE454937 HVSMEh0095J12f Hordeum vulgare 5-45 ... 38 0.35
gb|BM374908.1|BM374908 EBma05_SQ003_I04_R maternal, 12 DPA,... 38 0.35
gb|AV914698.1|AV914698 AV914698 K. Sato unpublished cDNA li... 38 0.35
gb|AV925928.1|AV925928 AV925928 K. Sato unpublished cDNA li... 38 0.35
gb|AV925937.1|AV925937 AV925937 K. Sato unpublished cDNA li... 38 0.35
gb|AJ461243.1|AJ461243 AJ461243 S00002 Hordeum vulgare subs... 38 0.35
gb|AJ461244.1|AJ461244 AJ461244 S00002 Hordeum vulgare subs... 38 0.35
gb|BQ463043.1|BQ463043 HI02N16r HI Hordeum vulgare subsp. v... 38 0.35
gb|BQ468840.1|BQ468840 HM02H24r HM Hordeum vulgare subsp. v... 38 0.35
gb|BQ468955.1|BQ468955 HM02O16r HM Hordeum vulgare subsp. v... 38 0.35
gb|BQ469158.1|BQ469158 HM03J07r HM Hordeum vulgare subsp. v... 38 0.35
gb|BQ471881.1|BQ471881 HV03M06r HV Hordeum vulgare subsp. v... 38 0.35
gb|BM377528.2|BM377528 EBem04_SQ003_G14_R embryo, 12 DPA, n... 38 0.35
gb|BM441482.2|BM441482 EBma05_SQ004_I04_R maternal, 12 DPA,... 38 0.35
gb|BM097223.2|BM097223 EBpi07_SQ002_M14_R pistil, 12 DPA, n... 38 0.35
gb|BQ754010.1|BQ754010 EBca01_SQ002_I16_R carpel, pre-anthe... 38 0.35
gb|BQ764041.1|BQ764041 EBro03_SQ006_I05_R root, 3 week, wat... 38 0.35
gb|BQ764811.1|BQ764811 EBca01_SQ004_P24 _R carpel, pre-anth... 38 0.35
gb|BQ765597.1|BQ765597 EBro03_SQ007_K15_R root, 3 week, wat... 38 0.35
gb|BQ766361.1|BQ766361 EBro08_SQ005_C23_R root, 3 week, dro... 38 0.35
gb|BU981882.1|BU981882 HA24O13r HA Hordeum vulgare subsp. v... 38 0.35
gb|BU998011.1|BU998011 HI09L08r HI Hordeum vulgare subsp. v... 38 0.35
gb|BU998034.1|BU998034 HI09M16r HI Hordeum vulgare subsp. v... 38 0.35
gb|BU999442.1|BU999442 HI14I13r HI Hordeum vulgare subsp. v... 38 0.35
gb|CA001615.1|CA001615 HS05B09r HS Hordeum vulgare subsp. v... 38 0.35
gb|CA012767.1|CA012767 HT06G03r HT Hordeum vulgare subsp. v... 38 0.35
gb|CA013775.1|CA013775 HT09H04r HT Hordeum vulgare subsp. v... 38 0.35
gb|CA014019.1|CA014019 HT10C08r HT Hordeum vulgare subsp. v... 38 0.35
gb|CA020757.1|CA020757 HZ37J16r HZ Hordeum vulgare subsp. v... 38 0.35
gb|CA026592.1|CA026592 HZ56F18r HZ Hordeum vulgare subsp. v... 38 0.35
gb|CA026825.1|CA026825 HZ57B05r HZ Hordeum vulgare subsp. v... 38 0.35
gb|CA028316.1|CA028316 HZ61J24r HZ Hordeum vulgare subsp. v... 38 0.35
gb|CA032808.1|CA032808 HX14E06r HX Hordeum vulgare subsp. v... 38 0.35
gb|CB877814.1|CB877814 HP06E14T HP Hordeum vulgare subsp. v... 38 0.35
gb|CK122945.1|CK122945 BES1824101g10 BES1824 Hordeum vulgar... 38 0.35
emb|AJ224325.1|HVH224325 Hordeum vulgare cv. Haisa mRNA for... 38 0.35
>gb|AV917194.1|AV917194 AV917194 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8k04 5', mRNA sequence
Length = 515
Score = 200 bits (101), Expect = 4e-050
Identities = 182/209 (87%)
Strand = Plus / Plus
Query: 231 gcggaggcggcaacctgaatccctgggagtgctcgcccaagtgcgggtcgcggtgctcca 290
|||| |||||||| || || || |||||||||||| |||||||| ||||||||||||
Sbjct: 111 gcggcggcggcaagctcaagccatgggagtgctcgtccaagtgctcgtcgcggtgctcgg 170
Query: 291 agacgcagtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctct 350
||||||||||| |||||| ||||| |||| || |||||||||||||||| |||||||
Sbjct: 171 ggacgcagtacaagaaggcgtgcctgacctactgcaacaagtgctgcgccacctgcctct 230
Query: 351 gcgtgccaccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaa 410
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 231 gcgtcccgccgggcacctacggcaacaagggcgcctgcccctgctacaacaactggaaga 290
Query: 411 ccaaggaaggagggcccaagtgcccctag 439
||||||| ||||| |||||||||||||||
Sbjct: 291 ccaaggagggaggccccaagtgcccctag 319
>gb|BQ458826.1|BQ458826 HA04B17r HA Hordeum vulgare subsp. vulgare cDNA clone HA04B17
5-PRIME, mRNA sequence
Length = 514
Score = 200 bits (101), Expect = 4e-050
Identities = 182/209 (87%)
Strand = Plus / Plus
Query: 231 gcggaggcggcaacctgaatccctgggagtgctcgcccaagtgcgggtcgcggtgctcca 290
|||| |||||||| || || || |||||||||||| |||||||| ||||||||||||
Sbjct: 154 gcggcggcggcaagctcaagccatgggagtgctcgtccaagtgctcgtcgcggtgctcgg 213
Query: 291 agacgcagtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctct 350
||||||||||| |||||| ||||| |||| || |||||||||||||||| |||||||
Sbjct: 214 ggacgcagtacaagaaggcgtgcctgacctactgcaacaagtgctgcgccacctgcctct 273
Query: 351 gcgtgccaccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaa 410
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 274 gcgtcccgccgggcacctacggcaacaagggcgcctgcccctgctacaacaactggaaga 333
Query: 411 ccaaggaaggagggcccaagtgcccctag 439
||||||| ||||| |||||||||||||||
Sbjct: 334 ccaaggagggaggccccaagtgcccctag 362
>gb|BQ656545.1|BQ656545 HA04B17u HA Hordeum vulgare subsp. vulgare cDNA clone HA04B17
3-PRIME, mRNA sequence
Length = 515
Score = 200 bits (101), Expect = 4e-050
Identities = 182/209 (87%)
Strand = Plus / Minus
Query: 231 gcggaggcggcaacctgaatccctgggagtgctcgcccaagtgcgggtcgcggtgctcca 290
|||| |||||||| || || || |||||||||||| |||||||| ||||||||||||
Sbjct: 361 gcggcggcggcaagctcaagccatgggagtgctcgtccaagtgctcgtcgcggtgctcgg 302
Query: 291 agacgcagtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctct 350
||||||||||| |||||| ||||| |||| || |||||||||||||||| |||||||
Sbjct: 301 ggacgcagtacaagaaggcgtgcctgacctactgcaacaagtgctgcgccacctgcctct 242
Query: 351 gcgtgccaccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaa 410
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 gcgtcccgccgggcacctacggcaacaagggcgcctgcccctgctacaacaactggaaga 182
Query: 411 ccaaggaaggagggcccaagtgcccctag 439
||||||| ||||| |||||||||||||||
Sbjct: 181 ccaaggagggaggccccaagtgcccctag 153
>gb|BU985820.1|BU985820 HF08L16r HF Hordeum vulgare subsp. vulgare cDNA clone HF08L16
5-PRIME, mRNA sequence
Length = 517
Score = 200 bits (101), Expect = 4e-050
Identities = 182/209 (87%)
Strand = Plus / Plus
Query: 231 gcggaggcggcaacctgaatccctgggagtgctcgcccaagtgcgggtcgcggtgctcca 290
|||| |||||||| || || || |||||||||||| |||||||| ||||||||||||
Sbjct: 160 gcggcggcggcaagctcaagccatgggagtgctcgtccaagtgctcgtcgcggtgctcgg 219
Query: 291 agacgcagtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctct 350
||||||||||| |||||| ||||| |||| || |||||||||||||||| |||||||
Sbjct: 220 ggacgcagtacaagaaggcgtgcctgacctactgcaacaagtgctgcgccacctgcctct 279
Query: 351 gcgtgccaccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaa 410
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 280 gcgtcccgccgggcacctacggcaacaagggcgcctgcccctgctacaacaactggaaga 339
Query: 411 ccaaggaaggagggcccaagtgcccctag 439
||||||| ||||| |||||||||||||||
Sbjct: 340 ccaaggagggaggccccaagtgcccctag 368
>gb|BU995569.1|BU995569 HM10K10r HM Hordeum vulgare subsp. vulgare cDNA clone HM10K10
5-PRIME, mRNA sequence
Length = 587
Score = 200 bits (101), Expect = 4e-050
Identities = 182/209 (87%)
Strand = Plus / Plus
Query: 231 gcggaggcggcaacctgaatccctgggagtgctcgcccaagtgcgggtcgcggtgctcca 290
|||| |||||||| || || || |||||||||||| |||||||| ||||||||||||
Sbjct: 137 gcggcggcggcaagctcaagccatgggagtgctcgtccaagtgctcgtcgcggtgctcgg 196
Query: 291 agacgcagtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctct 350
||||||||||| |||||| ||||| |||| || |||||||||||||||| |||||||
Sbjct: 197 ggacgcagtacaagaaggcgtgcctgacctactgcaacaagtgctgcgccacctgcctct 256
Query: 351 gcgtgccaccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaa 410
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 257 gcgtcccgccgggcacctacggcaacaagggcgcctgcccctgctacaacaactggaaga 316
Query: 411 ccaaggaaggagggcccaagtgcccctag 439
||||||| ||||| |||||||||||||||
Sbjct: 317 ccaaggagggaggccccaagtgcccctag 345
>gb|CB879942.1|CB879942 HM05A07w HM Hordeum vulgare subsp. vulgare cDNA clone HM05A07
3-PRIME, mRNA sequence
Length = 589
Score = 200 bits (101), Expect = 4e-050
Identities = 182/209 (87%)
Strand = Plus / Minus
Query: 231 gcggaggcggcaacctgaatccctgggagtgctcgcccaagtgcgggtcgcggtgctcca 290
|||| |||||||| || || || |||||||||||| |||||||| ||||||||||||
Sbjct: 452 gcggcggcggcaagctcaagccatgggagtgctcgtccaagtgctcgtcgcggtgctcgg 393
Query: 291 agacgcagtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctct 350
||||||||||| |||||| ||||| |||| || |||||||||||||||| |||||||
Sbjct: 392 ggacgcagtacaagaaggcgtgcctgacctactgcaacaagtgctgcgccacctgcctct 333
Query: 351 gcgtgccaccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaa 410
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 332 gcgtcccgccgggcacctacggcaacaagggcgcctgcccctgctacaacaactggaaga 273
Query: 411 ccaaggaaggagggcccaagtgcccctag 439
||||||| ||||| |||||||||||||||
Sbjct: 272 ccaaggagggaggccccaagtgcccctag 244
>gb|CB881728.1|CB881728 HM10L09w HM Hordeum vulgare subsp. vulgare cDNA clone HM10L09
3-PRIME, mRNA sequence
Length = 602
Score = 200 bits (101), Expect = 4e-050
Identities = 182/209 (87%)
Strand = Plus / Minus
Query: 231 gcggaggcggcaacctgaatccctgggagtgctcgcccaagtgcgggtcgcggtgctcca 290
|||| |||||||| || || || |||||||||||| |||||||| ||||||||||||
Sbjct: 451 gcggcggcggcaagctcaagccatgggagtgctcgtccaagtgctcgtcgcggtgctcgg 392
Query: 291 agacgcagtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctct 350
||||||||||| |||||| ||||| |||| || |||||||||||||||| |||||||
Sbjct: 391 ggacgcagtacaagaaggcgtgcctgacctactgcaacaagtgctgcgccacctgcctct 332
Query: 351 gcgtgccaccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaa 410
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 331 gcgtcccgccgggcacctacggcaacaagggcgcctgcccctgctacaacaactggaaga 272
Query: 411 ccaaggaaggagggcccaagtgcccctag 439
||||||| ||||| |||||||||||||||
Sbjct: 271 ccaaggagggaggccccaagtgcccctag 243
>gb|BM099601.2|BM099601 EBes01_SQ003_L13_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ003_L13 5', mRNA sequence
Length = 362
Score = 196 bits (99), Expect = 6e-049
Identities = 180/207 (86%)
Strand = Plus / Plus
Query: 231 gcggaggcggcaacctgaatccctgggagtgctcgcccaagtgcgggtcgcggtgctcca 290
|||| |||||||| || || || |||||||||||| |||||||| ||||||||||||
Sbjct: 156 gcggcggcggcaagctcaagccatgggagtgctcgtccaagtgctcgtcgcggtgctcgg 215
Query: 291 agacgcagtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctct 350
||||||||||| |||||| ||||| |||| || |||||||||||||||| |||||||
Sbjct: 216 ggacgcagtacaagaaggcgtgcctgacctactgcaacaagtgctgcgccacctgcctct 275
Query: 351 gcgtgccaccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaa 410
|||| || ||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 276 gcgtcccgccgggcacctacggcaacaagggcgcctgcccctgctacaacaactggaaga 335
Query: 411 ccaaggaaggagggcccaagtgcccct 437
||||||| ||||| |||||||||||||
Sbjct: 336 ccaaggagggaggccccaagtgcccct 362
>gb|AJ462863.1|AJ462863 AJ462863 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200057E02F1, mRNA sequence
Length = 420
Score = 93.7 bits (47), Expect = 7e-018
Identities = 116/139 (83%)
Strand = Plus / Plus
Query: 297 agtacaggaaggcctgcctcaccttatgtaacaagtgctgcgccaagtgcctctgcgtgc 356
||||||||||| | |||||| ||| || |||||||||||| || ||||| |||||||
Sbjct: 64 agtacaggaagccgtgcctcttcttctgcaacaagtgctgcaacacctgcctgtgcgtgc 123
Query: 357 caccggggttctacggcaacaagggcgcctgcccctgctacaacaactggaaaaccaagg 416
| |||| ||||||||| ||||| || ||||||||||||||||||||||| |||||||
Sbjct: 124 cgtcgggcttctacggccacaagtacgagtgcccctgctacaacaactggaagaccaagg 183
Query: 417 aaggagggcccaagtgccc 435
| ||| | |||||||||||
Sbjct: 184 agggacgccccaagtgccc 202
>gb|AJ462864.1|AJ462864 AJ462864 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200063B06F1, mRNA sequence
Length = 180
Score = 67.9 bits (34), Expect = 4e-010
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 386 tgcccctgctacaacaactggaaaaccaaggaaggagggcccaagtgccc 435
||||||||||||||||||||||| |||||||| ||| | |||||||||||
Sbjct: 13 tgcccctgctacaacaactggaagaccaaggagggacgccccaagtgccc 62
>gb|BF630057.2|BF630057 HVSMEb0007N02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007N02f, mRNA sequence
Length = 500
Score = 50.1 bits (25), Expect = 9e-005
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 189 agggcggcggcggaggcggaggcggaggc 217
|||||||||| ||||||||||||||||||
Sbjct: 73 agggcggcgggggaggcggaggcggaggc 45
>gb|BU993996.1|BU993996 HM05E23r HM Hordeum vulgare subsp. vulgare cDNA clone HM05E23
5-PRIME, mRNA sequence
Length = 478
Score = 50.1 bits (25), Expect = 9e-005
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 193 cggcggcggaggcggaggcggaggc 217
|||||||||||||||||||||||||
Sbjct: 262 cggcggcggaggcggaggcggaggc 286
Score = 38.2 bits (19), Expect = 0.35
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcgg 213
||||| |||||||||||||||||
Sbjct: 266 ggcggaggcggaggcggaggcgg 288
>gb|AL450503.1|AL450503 AL450503 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK01G18u 5', mRNA sequence
Length = 628
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcggag 215
||||||||||||||||||||||||
Sbjct: 125 gcggcggcggaggcggaggcggag 102
>gb|BG301215.1|BG301215 HVSMEb0019P12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019P12f, mRNA sequence
Length = 908
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcggag 215
||||||||||||||||||||||||
Sbjct: 161 gcggcggcggaggcggaggcggag 138
>gb|BF257955.3|BF257955 HVSMEf0014F11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0014F11f, mRNA sequence
Length = 572
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 195 gcggcggaggcggaggcggaggca 218
||||||||||||||||||||||||
Sbjct: 1 gcggcggaggcggaggcggaggca 24
>gb|CB877073.1|CB877073 HP03H14T HP Hordeum vulgare subsp. vulgare cDNA clone HP03H14
5-PRIME, mRNA sequence
Length = 575
Score = 48.1 bits (24), Expect = 4e-004
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcggag 215
||||||||||||||||||||||||
Sbjct: 231 gcggcggcggaggcggaggcggag 208
>gb|BF256616.2|BF256616 HVSMEf0010I02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010I02f, mRNA sequence
Length = 806
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 36 ggcggaggcggaggcggaggcggaggc 62
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 35 cggcggaggcggaggcggaggc 56
>gb|BQ463185.1|BQ463185 HI04F06r HI Hordeum vulgare subsp. vulgare cDNA clone HI04F06
5-PRIME, mRNA sequence
Length = 466
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 35 ggcggaggcggaggcggaggcggaggc 61
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 34 cggcggaggcggaggcggaggc 55
>gb|BM373780.2|BM373780 EBma03_SQ002_K17_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ002_K17 5', mRNA sequence
Length = 197
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 35 ggcggaggcggaggcggaggcggaggc 61
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 34 cggcggaggcggaggcggaggc 55
>gb|BQ764244.1|BQ764244 EBan01_SQ005_E09 _R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_E09 5', mRNA sequence
Length = 674
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 50 ggcggaggcggaggcggaggcggaggc 76
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 49 cggcggaggcggaggcggaggc 70
>gb|BQ764810.1|BQ764810 EBca01_SQ004_P23_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_P23 5', mRNA sequence
Length = 554
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 29 ggcggaggcggaggcggaggcggaggc 55
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 28 cggcggaggcggaggcggaggc 49
>gb|BU984777.1|BU984777 HF04P16r HF Hordeum vulgare subsp. vulgare cDNA clone HF04P16
5-PRIME, mRNA sequence
Length = 635
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 23 ggcggaggcggaggcggaggcggaggc 49
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggagg 216
||||| ||||||||||||||||||||
Sbjct: 29 ggcggaggcggaggcggaggcggagg 54
>gb|CA011989.1|CA011989 HT04B22r HT Hordeum vulgare subsp. vulgare cDNA clone HT04B22
5-PRIME, mRNA sequence
Length = 290
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 17 ggcggaggcggaggcggaggcggaggc 43
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 16 cggcggaggcggaggcggaggc 37
>gb|CA026368.1|CA026368 HZ55L12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55L12
5-PRIME, mRNA sequence
Length = 479
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 39 ggcggaggcggaggcggaggcggaggc 65
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 38 cggcggaggcggaggcggaggc 59
>gb|CA032334.1|CA032334 HX12L10r HX Hordeum vulgare subsp. vulgare cDNA clone HX12L10
5-PRIME, mRNA sequence
Length = 651
Score = 46.1 bits (23), Expect = 0.001
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||| |||||||||||||||||||||
Sbjct: 31 ggcggaggcggaggcggaggcggaggc 57
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 30 cggcggaggcggaggcggaggc 51
>gb|AL508266.1|AL508266 AL508266 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08E06V 5',
mRNA sequence
Length = 575
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 190 gggcggcggcggaggcggaggcggag 215
|||||||||||| |||||||||||||
Sbjct: 115 gggcggcggcggcggcggaggcggag 140
>gb|BM376540.1|BM376540 EBem05_SQ002_I08_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_I08 5', mRNA sequence
Length = 384
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 121 gcggcggcggaggcggaggcgg 100
>gb|BM377054.1|BM377054 EBem05_SQ003_P19_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_P19 5', mRNA sequence
Length = 312
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 46 gcggcggcggaggcggaggcgg 25
>gb|BQ465618.1|BQ465618 HU04C24r HU Hordeum vulgare subsp. vulgare cDNA clone HU04C24
5-PRIME, mRNA sequence
Length = 582
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 190 gggcggcggcggaggcggaggcggag 215
|||||||||||| |||||||||||||
Sbjct: 145 gggcggcggcggcggcggaggcggag 170
>gb|BQ471005.1|BQ471005 HX04L01r HX Hordeum vulgare subsp. vulgare cDNA clone HX04L01
5-PRIME, mRNA sequence
Length = 452
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 202 gcggcggcggaggcggaggcgg 181
>gb|BQ665683.1|BQ665683 HX04L01u HX Hordeum vulgare subsp. vulgare cDNA clone HX04L01
3-PRIME, mRNA sequence
Length = 452
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 251 gcggcggcggaggcggaggcgg 272
>gb|BM372892.2|BM372892 EBma04_SQ002_E17_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_E17 5', mRNA sequence
Length = 515
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 202 gcggcggcggaggcggaggcgg 181
>gb|BQ757990.1|BQ757990 EBem10_SQ005_P01_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ005_P01 5', mRNA sequence
Length = 244
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 180 gcggcggcggaggcggaggcgg 159
>gb|BQ763457.1|BQ763457 EBro02_SQ008_M12_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ008_M12 5', mRNA sequence
Length = 487
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 236 gcggcggcggaggcggaggcgg 215
>gb|BQ763923.1|BQ763923 EBro03_SQ005_D22_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_D22 5', mRNA sequence
Length = 487
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 236 gcggcggcggaggcggaggcgg 215
>gb|BQ764148.1|BQ764148 EBan01_SQ005_A06_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_A06 5', mRNA sequence
Length = 525
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 197 ggcggaggcggaggcggaggca 218
||||||||||||||||||||||
Sbjct: 48 ggcggaggcggaggcggaggca 69
>gb|BU979275.1|BU979275 HA15K10r HA Hordeum vulgare subsp. vulgare cDNA clone HA15K10
5-PRIME, mRNA sequence
Length = 476
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 226 gcggcggcggaggcggaggcgg 205
>gb|BU979313.1|BU979313 HA15M05r HA Hordeum vulgare subsp. vulgare cDNA clone HA15M05
5-PRIME, mRNA sequence
Length = 324
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 212 gcggcggcggaggcggaggcgg 191
>gb|BU994229.1|BU994229 HM06D21r HM Hordeum vulgare subsp. vulgare cDNA clone HM06D21
5-PRIME, mRNA sequence
Length = 648
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggagg 216
||||||||||| ||||||||||||||
Sbjct: 160 ggcggcggcggcggcggaggcggagg 185
Score = 38.2 bits (19), Expect = 0.35
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||||||||| ||||| |||||||||
Sbjct: 154 ggcggcggcggcggcggcggcggaggc 180
>gb|BU996052.1|BU996052 HM12E08r HM Hordeum vulgare subsp. vulgare cDNA clone HM12E08
5-PRIME, mRNA sequence
Length = 628
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 191 ggcggcggcggaggcggaggcggagg 216
|||||||||||||||||||| |||||
Sbjct: 345 ggcggcggcggaggcggaggaggagg 320
>gb|CA002728.1|CA002728 HS08F17r HS Hordeum vulgare subsp. vulgare cDNA clone HS08F17
5-PRIME, mRNA sequence
Length = 396
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 190 gggcggcggcggaggcggaggcggag 215
|||||||||||| |||||||||||||
Sbjct: 132 gggcggcggcggcggcggaggcggag 157
>gb|CA003577.1|CA003577 HS14O14r HS Hordeum vulgare subsp. vulgare cDNA clone HS14O14
5-PRIME, mRNA sequence
Length = 484
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 196 cggcggaggcggaggcggaggc 217
||||||||||||||||||||||
Sbjct: 45 cggcggaggcggaggcggaggc 24
>gb|CA022199.1|CA022199 HZ42H02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42H02
5-PRIME, mRNA sequence
Length = 578
Score = 44.1 bits (22), Expect = 0.006
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggagg 216
||||||||||| ||||||||||||||
Sbjct: 58 ggcggcggcggcggcggaggcggagg 83
Score = 38.2 bits (19), Expect = 0.35
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
||||||||||| ||||| |||||||||
Sbjct: 52 ggcggcggcggcggcggcggcggaggc 78
>gb|CB883682.1|CB883682 HQ02P14w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02P14
3-PRIME, mRNA sequence
Length = 388
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 193 cggcggcggaggcggaggcgga 214
||||||||||||||||||||||
Sbjct: 226 cggcggcggaggcggaggcgga 247
>gb|CV061325.1|CV061325 BNEL67e4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL67e4 5' similar to putative
ribosomal protein, mRNA sequence
Length = 473
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 194 gcggcggcggaggcggaggcgg 173
>gb|CK124048.1|CK124048 BES1824106k10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010K106 5-PRIME, mRNA sequence
Length = 257
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 228 gcggcggcggaggcggaggcgg 207
>gb|CK125324.1|CK125324 BES1824107l03 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010L037 5-PRIME, mRNA sequence
Length = 641
Score = 44.1 bits (22), Expect = 0.006
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 192 gcggcggcggaggcggaggcgg 213
||||||||||||||||||||||
Sbjct: 255 gcggcggcggaggcggaggcgg 234
>gb|AL510227.1|AL510227 AL510227 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04E16u 3',
mRNA sequence
Length = 581
Score = 42.1 bits (21), Expect = 0.022
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 197 ggcggaggcggaggcggaggc 217
|||||||||||||||||||||
Sbjct: 103 ggcggaggcggaggcggaggc 83
Score = 38.2 bits (19), Expect = 0.35
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 191 ggcggcggcggaggcggaggcgg 213
||||| |||||||||||||||||
Sbjct: 103 ggcggaggcggaggcggaggcgg 81
>gb|BF622478.2|BF622478 HVSMEa0004I06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004I06f, mRNA sequence
Length = 489
Score = 42.1 bits (21), Expect = 0.022
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 197 ggcggaggcggaggcggaggc 217
|||||||||||||||||||||
Sbjct: 36 ggcggaggcggaggcggaggc 16
Score = 42.1 bits (21), Expect = 0.022
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 191 ggcggcggcggaggcggaggcggag 215
||||| |||||||||||||||||||
Sbjct: 36 ggcggaggcggaggcggaggcggag 12
Score = 38.2 bits (19), Expect = 0.35
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 191 ggcggcggcggaggcggaggcggaggc 217
|||||| || |||||||||||||||||
Sbjct: 48 ggcggccgcagaggcggaggcggaggc 22
>gb|BG299533.1|BG299533 HVSMEa0020J23f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0020J23f, mRNA sequence
Length = 822
Score = 42.1 bits (21), Expect = 0.022
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 197 ggcggaggcggaggcggaggc 217
|||||||||||||||||||||
Sbjct: 74 ggcggaggcggaggcggaggc 54
Score = 38.2 bits (19), Expect = 0.35
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 191 ggcggcggcggaggcggaggcgg 213
||||| |||||||||||||||||
Sbjct: 74 ggcggaggcggaggcggaggcgg 52
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 129,987
Number of Sequences: 312970
Number of extensions: 129987
Number of successful extensions: 45284
Number of sequences better than 0.5: 250
Number of HSP's better than 0.5 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44426
Number of HSP's gapped (non-prelim): 756
length of query: 654
length of database: 175,134,539
effective HSP length: 19
effective length of query: 635
effective length of database: 169,188,109
effective search space: 107434449215
effective search space used: 107434449215
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)