BLASTN 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 9009927.2.1
(404 letters)
Database: At_nucl_with_EST.fasta
1,013,581 sequences; 908,940,872 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BP867048.1|BP867048 BP867048 RAFL21 Arabidopsis thaliana... 62 8e-008
gb|DR751024.1|DR751024 27-L022242-065-008-C04-SeLA MPIZ-ADI... 62 8e-008
gb|DR751025.1|DR751025 27-L022243-065-008-C04-SeLB MPIZ-ADI... 62 8e-008
gb|AF062895.1|AF062895 Arabidopsis thaliana putative transc... 62 8e-008
gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm c... 62 8e-008
gb|BT005074.1| Arabidopsis thaliana clone U50259 putative m... 62 8e-008
emb|AL773061.1| Arabidopsis thaliana transposon insertion S... 62 8e-008
gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis tha... 62 8e-008
gb|AY519551.1| Arabidopsis thaliana MYB transcription facto... 62 8e-008
emb|BX817339.1|CNS0AAUG Arabidopsis thaliana Full-length cD... 62 8e-008
dbj|AK117469.1| Arabidopsis thaliana At1g08810 mRNA for put... 62 8e-008
emb|CS137506.1| Sequence 477 from Patent WO2005047516 62 8e-008
ref|NM_100755.2| Arabidopsis thaliana MYB60; DNA binding / ... 62 8e-008
ref|NM_202066.1| Arabidopsis thaliana MYB60; DNA binding AT... 62 8e-008
ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complet... 62 8e-008
gb|DN604581.1|DN604581 JCAt5g61420 Arabidopsis Gateway cDNA... 56 5e-006
gb|DR751443.1|DR751443 06-L021127-065-005-F01-SeLA MPIZ-ADI... 56 5e-006
gb|AF175998.1|AF175998 Arabidopsis thaliana putative transc... 56 5e-006
emb|AX506861.1| Sequence 1556 from Patent WO0216655 56 5e-006
emb|AX651823.1| Sequence 679 from Patent WO03000898 56 5e-006
gb|AY519643.1| Arabidopsis thaliana MYB transcription facto... 56 5e-006
emb|BX830516.1|CNS0A289 Arabidopsis thaliana Full-length cD... 56 5e-006
dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosom... 56 5e-006
dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, com... 56 5e-006
ref|NM_180910.1| Arabidopsis thaliana MYB28; DNA binding / ... 56 5e-006
ref|NM_125535.2| Arabidopsis thaliana MYB28; DNA binding / ... 56 5e-006
ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complet... 56 5e-006
emb|AL091598.1|CNS00UY8 Arabidopsis thaliana genome survey ... 54 2e-005
emb|CR405437.1| Arabidopsis thaliana T-DNA flanking sequenc... 54 2e-005
emb|CR405438.1| Arabidopsis thaliana T-DNA flanking sequenc... 54 2e-005
gb|T22593.1|T22593 4601 Lambda-PRL2 Arabidopsis thaliana cD... 54 2e-005
gb|T43937.1|T43937 7200 Lambda-PRL2 Arabidopsis thaliana cD... 54 2e-005
gb|AI993846.1|AI993846 701515156 A. thaliana, Ohio State cl... 54 2e-005
gb|AU238168.1|AU238168 AU238168 RAFL16 Arabidopsis thaliana... 54 2e-005
gb|CB255433.1|CB255433 42-E012998-019-004-C12-T7R MPIZ-ADIS... 54 2e-005
gb|DN604613.1|DN604613 JCAt2g36890 Arabidopsis Gateway cDNA... 54 2e-005
gb|DR749769.1|DR749769 92-L022342-065-009-D12-SeLA MPIZ-ADI... 54 2e-005
gb|DR749770.1|DR749770 92-L022343-065-009-D12-SeLB MPIZ-ADI... 54 2e-005
gb|DR751187.1|DR751187 19-L022342-065-009-C03-SeLA MPIZ-ADI... 54 2e-005
gb|AF062880.1|AF062880 Arabidopsis thaliana putative transc... 54 2e-005
gb|AF062887.1|AF062887 Arabidopsis thaliana putative transc... 54 2e-005
emb|AX506289.1| Sequence 984 from Patent WO0216655 54 2e-005
emb|AX507298.1| Sequence 1993 from Patent WO0216655 54 2e-005
emb|AX651296.1| Sequence 81 from Patent WO03000898 54 2e-005
gb|BT006244.1| Arabidopsis thaliana At1g18570 mRNA, complet... 54 2e-005
gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16... 54 2e-005
gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8... 54 2e-005
gb|AY519555.1| Arabidopsis thaliana MYB transcription facto... 54 2e-005
gb|AY519577.1| Arabidopsis thaliana MYB transcription facto... 54 2e-005
emb|BX833897.1|CNS09YYU Arabidopsis thaliana Full-length cD... 54 2e-005
emb|BX821152.1|CNS0AA4K Arabidopsis thaliana Full-length cD... 54 2e-005
emb|BX815450.1|CNS0ABCE Arabidopsis thaliana Full-length cD... 54 2e-005
emb|BX815802.1|CNS0ABCU Arabidopsis thaliana Full-length cD... 54 2e-005
emb|BX814902.1|CNS0ACDI Arabidopsis thaliana Full-length cD... 54 2e-005
dbj|AK117331.1| Arabidopsis thaliana At1g18570 mRNA for unk... 54 2e-005
ref|NM_129245.2| Arabidopsis thaliana DNA binding / transcr... 54 2e-005
ref|NM_101715.3| Arabidopsis thaliana MYB51; DNA binding / ... 54 2e-005
ref|NC_003071.3| Arabidopsis thaliana chromosome 2, complet... 54 2e-005
gb|AV553519.1|AV553519 AV553519 Arabidopsis thaliana roots ... 52 7e-005
gb|DN604580.1|DN604580 JCAt1g74650 Arabidopsis Gateway cDNA... 52 7e-005
gb|DR751182.1|DR751182 19-L021127-065-005-C03-SeLA MPIZ-ADI... 52 7e-005
gb|DR751183.1|DR751183 19-L021131-065-005-C03-SeLB MPIZ-ADI... 52 7e-005
gb|AC011765.6|AC011765 Arabidopsis thaliana chromosome 1 BA... 52 7e-005
gb|AY519571.1| Arabidopsis thaliana MYB transcription facto... 52 7e-005
emb|BX814742.1|CNS0AEA2 Arabidopsis thaliana Full-length cD... 52 7e-005
emb|X90387.1|ATCY13GEN A.thaliana DNA for cY13 gene 52 7e-005
emb|X90383.1|ATY13GENE A.thaliana DNA for Y13 gene 52 7e-005
emb|CS137618.1| Sequence 589 from Patent WO2005047516 52 7e-005
gb|AE005173.1| Arabidopsis thaliana chromosome 1, bottom ar... 52 7e-005
ref|NM_106123.3| Arabidopsis thaliana DNA binding / transcr... 52 7e-005
gb|AU236547.1|AU236547 AU236547 RAFL15 Arabidopsis thaliana... 50 3e-004
gb|CK119118.1|CK119118 214c05.p1 AtM1 Arabidopsis thaliana ... 50 3e-004
gb|DN604579.1|DN604579 JCAt3g01140 Arabidopsis Gateway cDNA... 50 3e-004
gb|DN604583.1|DN604583 JCAt5g15310 Arabidopsis Gateway cDNA... 50 3e-004
gb|DR750660.1|DR750660 45-L022342-065-009-E06-SeLA MPIZ-ADI... 50 3e-004
gb|DR750661.1|DR750661 45-L022343-065-009-E06-SeLB MPIZ-ADI... 50 3e-004
emb|X99809.1|ATMIXTA A.thaliana mRNA for Mixta protein 50 3e-004
gb|AF370613.1|AF370613 Arabidopsis thaliana myb-related pro... 50 3e-004
gb|AF249309.1|AF249309 Arabidopsis thaliana putative transc... 50 3e-004
gb|BV008056.1| MASC_STS15898 Arabidopsis thaliana (Guecking... 50 3e-004
gb|BV008057.1| MASC_STS15904 Arabidopsis thaliana (Koncheze... 50 3e-004
gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome II... 50 3e-004
gb|AY519581.1| Arabidopsis thaliana MYB transcription facto... 50 3e-004
gb|AY519624.1| Arabidopsis thaliana MYB transcription facto... 50 3e-004
emb|BX833049.1|CNS09Z4V Arabidopsis thaliana Full-length cD... 50 3e-004
emb|BX815211.1|CNS0AAGG Arabidopsis thaliana Full-length cD... 50 3e-004
dbj|BA000014.8| Arabidopsis thaliana, chromosome 3, complet... 50 3e-004
emb|AL353993.1|ATF8M21 Arabidopsis thaliana DNA chromosome ... 50 3e-004
ref|NM_121535.2| Arabidopsis thaliana DNA binding / transcr... 50 3e-004
ref|NM_110979.2| Arabidopsis thaliana MYB106; DNA binding /... 50 3e-004
ref|NC_003074.4| Arabidopsis thaliana chromosome 3, complet... 50 3e-004
gb|AQ969545.1|AQ969545 LERJO14TF LERG Arabidopsis thaliana ... 46 0.005
gb|AQ969546.1|AQ969546 LERJO14TR LERG Arabidopsis thaliana ... 46 0.005
gb|AV827754.1|AV827754 AV827754 RAFL9 Arabidopsis thaliana ... 46 0.005
gb|AU235424.1|AU235424 AU235424 RAFL14 Arabidopsis thaliana... 46 0.005
gb|AU237469.1|AU237469 AU237469 RAFL16 Arabidopsis thaliana... 46 0.005
gb|CA781724.1|CA781724 046G05AF Infected Arabidopsis Leaf A... 46 0.005
gb|BP562693.1|BP562693 BP562693 RAFL14 Arabidopsis thaliana... 46 0.005
gb|BP814392.1|BP814392 BP814392 RAFL19 Arabidopsis thaliana... 46 0.005
gb|BP839090.1|BP839090 BP839090 RAFL19 Arabidopsis thaliana... 46 0.005
gb|DN604578.1|DN604578 JCAt5g62470 Arabidopsis Gateway cDNA... 46 0.005
gb|DN604606.1|DN604606 JCAt5g65790 Arabidopsis Gateway cDNA... 46 0.005
gb|DN604610.1|DN604610 JCAt3g06490 Arabidopsis Gateway cDNA... 46 0.005
gb|DN604616.1|DN604616 JCAt1g66230 Arabidopsis Gateway cDNA... 46 0.005
gb|DR749754.1|DR749754 95-L022342-065-009-G12-SeLA MPIZ-ADI... 46 0.005
gb|DR749755.1|DR749755 95-L022343-065-009-G12-SeLB MPIZ-ADI... 46 0.005
gb|DR750556.1|DR750556 51-L022342-065-009-C07-SeLA MPIZ-ADI... 46 0.005
gb|DR750557.1|DR750557 51-L022343-065-009-C07-SeLB MPIZ-ADI... 46 0.005
gb|DR750776.1|DR750776 38-L022342-065-009-F05-SeLA MPIZ-ADI... 46 0.005
gb|DR750777.1|DR750777 38-L022343-065-009-F05-SeLB MPIZ-ADI... 46 0.005
gb|DR751227.1|DR751227 17-L022342-065-009-A03-SeLA MPIZ-ADI... 46 0.005
gb|DR751228.1|DR751228 17-L022343-065-009-A03-SeLB MPIZ-ADI... 46 0.005
gb|DR751504.1|DR751504 03-L021127-065-005-C01-SeLA MPIZ-ADI... 46 0.005
gb|U26937.1|ATU26937 Arabidopsis thaliana clone myb7 DNA-bi... 46 0.005
gb|AF062901.1|AF062901 Arabidopsis thaliana putative transc... 46 0.005
gb|AF062914.1|AF062914 Arabidopsis thaliana putative transc... 46 0.005
gb|AF175993.2|AF175993 Arabidopsis thaliana putative transc... 46 0.005
gb|AF176001.1|AF176001 Arabidopsis thaliana putative transc... 46 0.005
gb|AF176002.1|AF176002 Arabidopsis thaliana putative transc... 46 0.005
gb|AF262733.2|AF262733 Arabidopsis thaliana putative transc... 46 0.005
gb|AY072387.1| Arabidopsis thaliana putative MYB family tra... 46 0.005
emb|AX506189.1| Sequence 884 from Patent WO0216655 46 0.005
emb|AX507638.1| Sequence 2333 from Patent WO0216655 46 0.005
emb|AX507651.1| Sequence 2346 from Patent WO0216655 46 0.005
gb|BT005994.1| Arabidopsis thaliana At5g65790 gene, complet... 46 0.005
emb|AX651705.1| Sequence 535 from Patent WO03000898 46 0.005
gb|AY085497.1| Arabidopsis thaliana clone 154343 mRNA, comp... 46 0.005
dbj|BD248412.1| Gene participating in tolerance against env... 46 0.005
gb|AC066691.3|AC066691 Arabidopsis thaliana chromosome 1 BA... 46 0.005
gb|AC020580.11|AC020580 Arabidopsis thaliana chromosome 3 B... 46 0.005
gb|AC005825.4| Arabidopsis thaliana chromosome 2 clone T24I... 46 0.005
gb|AY519565.1| Arabidopsis thaliana MYB transcription facto... 46 0.005
gb|AY519573.1| Arabidopsis thaliana MYB transcription facto... 46 0.005
gb|AY519584.1| Arabidopsis thaliana MYB transcription facto... 46 0.005
gb|AY519608.1| Arabidopsis thaliana MYB transcription facto... 46 0.005
gb|AY519614.1| Arabidopsis thaliana MYB transcription facto... 46 0.005
gb|AY519645.1| Arabidopsis thaliana MYB transcription facto... 46 0.005
gb|AY519647.1| Arabidopsis thaliana MYB transcription facto... 46 0.005
emb|BX832216.1|CNS0A278 Arabidopsis thaliana Full-length cD... 46 0.005
emb|BX829062.1|CNS0A3K8 Arabidopsis thaliana Full-length cD... 46 0.005
emb|BX820586.1|CNS0A8Q4 Arabidopsis thaliana Full-length cD... 46 0.005
emb|BX821980.1|CNS0AA2S Arabidopsis thaliana Full-length cD... 46 0.005
emb|BX815369.1|CNS0ABF8 Arabidopsis thaliana Full-length cD... 46 0.005
emb|AJ270060.1| Arabidopsis thaliana DNA chromosome 4, long... 46 0.005
dbj|AB010075.1| Arabidopsis thaliana genomic DNA, chromosom... 46 0.005
dbj|AK175718.1| Arabidopsis thaliana mRNA for myb-like prot... 46 0.005
dbj|AK175777.1| Arabidopsis thaliana mRNA for myb-like prot... 46 0.005
emb|AJ011669.1|ATH011669 Arabidopsis thaliana mRNA for MYB9... 46 0.005
emb|AL021635.1|ATT12H17 Arabidopsis thaliana DNA chromosome... 46 0.005
emb|AL021684.1|ATF6H11 Arabidopsis thaliana DNA chromosome ... 46 0.005
emb|AL035709.1|ATT28I19 Arabidopsis thaliana DNA chromosome... 46 0.005
emb|AL035440.2|ATF10M23 Arabidopsis thaliana DNA chromosome... 46 0.005
emb|AL161557.2|ATCHRIV57 Arabidopsis thaliana DNA chromosom... 46 0.005
emb|AL161566.2|ATCHRIV66 Arabidopsis thaliana DNA chromosom... 46 0.005
emb|AL161592.2|ATCHRIV88 Arabidopsis thaliana DNA chromosom... 46 0.005
emb|X90385.1|ATY49GENE A.thaliana DNA for Y49 gene 46 0.005
emb|CS137614.1| Sequence 585 from Patent WO2005047516 46 0.005
emb|CS137648.1| Sequence 619 from Patent WO2005047516 46 0.005
emb|CS137944.1| Sequence 915 from Patent WO2005047516 46 0.005
ref|NM_118827.1| Arabidopsis thaliana MYB97; DNA binding / ... 46 0.005
ref|NM_111525.2| Arabidopsis thaliana MYB108; DNA binding /... 46 0.005
ref|NM_118394.2| Arabidopsis thaliana MYB85; DNA binding / ... 46 0.005
ref|NM_119940.2| Arabidopsis thaliana DNA binding / transcr... 46 0.005
ref|NM_105294.2| Arabidopsis thaliana MYB20; DNA binding / ... 46 0.005
ref|NM_180917.1| Arabidopsis thaliana MYB96; DNA binding / ... 46 0.005
ref|NM_125641.2| Arabidopsis thaliana MYB96; DNA binding / ... 46 0.005
ref|NM_125976.2| Arabidopsis thaliana MYB68; DNA binding / ... 46 0.005
ref|NM_127224.3| Arabidopsis thaliana MYB7; DNA binding / t... 46 0.005
ref|NC_003075.3| Arabidopsis thaliana chromosome 4, complet... 46 0.005
emb|BX289946.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.018
emb|BX890762.1| Arabidopsis thaliana T-DNA flanking sequenc... 44 0.018
gb|AY008379.1| Arabidopsis thaliana putative transcription ... 44 0.018
gb|AC020665.6|AC020665 Arabidopsis thaliana chromosome 1 BA... 44 0.018
gb|AY519567.1| Arabidopsis thaliana MYB transcription facto... 44 0.018
emb|BX826079.1|CNS0A53K Arabidopsis thaliana Full-length cD... 44 0.018
dbj|AB015469.1| Arabidopsis thaliana genomic DNA, chromosom... 44 0.018
ref|NM_105309.3| Arabidopsis thaliana MYB114; DNA binding /... 44 0.018
gb|Z17896.1|Z17896 ATTS0380 AC16H Arabidopsis thaliana cDNA... 42 0.071
gb|H36879.1|H36879 15008 Lambda-PRL2 Arabidopsis thaliana c... 42 0.071
gb|T42000.1|T42000 5263 Lambda-PRL2 Arabidopsis thaliana cD... 42 0.071
gb|T46204.1|T46204 9467 Lambda-PRL2 Arabidopsis thaliana cD... 42 0.071
gb|AV824396.1|AV824396 AV824396 RAFL6 Arabidopsis thaliana ... 42 0.071
gb|AV831076.1|AV831076 AV831076 RAFL9 Arabidopsis thaliana ... 42 0.071
gb|CB256655.1|CB256655 66-E012744-027-007-D18-T7R MPIZ-ADIS... 42 0.071
gb|DN604568.1|DN604568 JCAt4g38620 Arabidopsis Gateway cDNA... 42 0.071
gb|DN604734.1|DN604734 JCAt1g22640 Arabidopsis Gateway cDNA... 42 0.071
gb|DR751444.1|DR751444 06-L021131-065-005-F01-SeLB MPIZ-ADI... 42 0.071
gb|DR751678.1|DR751678 12-L022342-065-009-D02-SeLA MPIZ-ADI... 42 0.071
gb|DR751679.1|DR751679 12-L022343-065-009-D02-SeLB MPIZ-ADI... 42 0.071
gb|AF062859.1|AF062859 Arabidopsis thaliana putative transc... 42 0.071
gb|AF062860.1|AF062860 Arabidopsis thaliana putative transc... 42 0.071
gb|AY072543.1| Arabidopsis thaliana At1g22640/F12K8.1 mRNA,... 42 0.071
gb|AY140037.1| Arabidopsis thaliana putative transcription ... 42 0.071
gb|AY070100.1| Arabidopsis thaliana putative transcription ... 42 0.071
gb|AY123004.1| Arabidopsis thaliana putative transcription ... 42 0.071
emb|AX507387.1| Sequence 2082 from Patent WO0216655 42 0.071
emb|AX507941.1| Sequence 2636 from Patent WO0216655 42 0.071
gb|BT000841.1| Arabidopsis thaliana At1g22640/F12K8.1 mRNA,... 42 0.071
gb|BT006302.1| Arabidopsis thaliana At4g38620 mRNA, complet... 42 0.071
gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BA... 42 0.071
gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis tha... 42 0.071
gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis tha... 42 0.071
gb|AC003979.2|T22J18 Arabidopsis thaliana chromosome 1 BAC ... 42 0.071
gb|AY519557.1| Arabidopsis thaliana MYB transcription facto... 42 0.071
gb|AY519615.1| Arabidopsis thaliana MYB transcription facto... 42 0.071
emb|BX818559.1|CNS0AB0D Arabidopsis thaliana Full-length cD... 42 0.071
emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome... 42 0.071
emb|AL035656.1|ATT9A14 Arabidopsis thaliana DNA chromosome ... 42 0.071
emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosom... 42 0.071
emb|AL365234.1|ATT30N20 Arabidopsis thaliana DNA chromosome... 42 0.071
emb|CS137880.1| Sequence 851 from Patent WO2005047516 42 0.071
ref|NM_121122.2| Arabidopsis thaliana transporter AT5G10840... 42 0.071
ref|NM_102111.2| Arabidopsis thaliana MYB3; DNA binding / t... 42 0.071
ref|NM_120023.2| Arabidopsis thaliana MYB4; transcription f... 42 0.071
emb|CR404092.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 0.28
emb|CR404093.1| Arabidopsis thaliana T-DNA flanking sequenc... 40 0.28
gb|DN604586.1|DN604586 JCAt5g07690 Arabidopsis Gateway cDNA... 40 0.28
gb|DR749923.1|DR749923 82-L022342-065-009-B11-SeLA MPIZ-ADI... 40 0.28
gb|DR749924.1|DR749924 82-L022343-065-009-B11-SeLB MPIZ-ADI... 40 0.28
gb|AF062872.1|AF062872 Arabidopsis thaliana putative transc... 40 0.28
gb|AY035145.1| Arabidopsis thaliana putative transcription ... 40 0.28
gb|AY059078.1| Arabidopsis thaliana putative transcription ... 40 0.28
gb|AY519617.1| Arabidopsis thaliana MYB transcription facto... 40 0.28
dbj|AB010070.1| Arabidopsis thaliana genomic DNA, chromosom... 40 0.28
ref|NM_120851.1| Arabidopsis thaliana MYB29; DNA binding / ... 40 0.28
>gb|BP867048.1|BP867048 BP867048 RAFL21 Arabidopsis thaliana cDNA clone RAFL21-79-M03 5',
mRNA sequence
Length = 386
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 293 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 352
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 353 atttaaagaagaagctcaa 371
>gb|DR751024.1|DR751024 27-L022242-065-008-C04-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 008-C04, mRNA sequence
Length = 791
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 374 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 433
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 434 atttaaagaagaagctcaa 452
>gb|DR751025.1|DR751025 27-L022243-065-008-C04-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 008-C04, mRNA sequence
Length = 793
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 686 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 627
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 626 atttaaagaagaagctcaa 608
>gb|AF062895.1|AF062895 Arabidopsis thaliana putative transcription factor (MYB60) mRNA,
complete cds
Length = 949
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 283 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 342
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 343 atttaaagaagaagctcaa 361
>gb|AE005172.1| Arabidopsis thaliana chromosome 1, top arm complete sequence
Length = 14221815
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 2819702 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 2819643
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 2819642 atttaaagaagaagctcaa 2819624
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 6390082 agaaccgataacgagatcaagaactactggaacac 6390116
Score = 42.1 bits (21), Expect = 0.071
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
||||| || ||||| ||||||||||| |||||||| || |||||| ||||||
Sbjct: 8006494 agaacagataacgagatcaagaactattggaacactcatatcaagaggaagct 8006546
>gb|BT005074.1| Arabidopsis thaliana clone U50259 putative myb family transcription
factor (At1g08810) mRNA, complete cds
Length = 874
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 272 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 331
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 332 atttaaagaagaagctcaa 350
>emb|AL773061.1| Arabidopsis thaliana transposon insertion STS SM_3.1132, sequence
tagged site
Length = 547
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 156 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 215
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 216 atttaaagaagaagctcaa 234
>gb|AC003981.2|AC003981 Genomic sequence for Arabidopsis thaliana BAC F22O13 from chromosome I,
complete sequence
Length = 133843
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 117776 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 117717
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 117716 atttaaagaagaagctcaa 117698
>gb|AY519551.1| Arabidopsis thaliana MYB transcription factor (At1g08810) mRNA,
complete cds
Length = 843
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 272 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 331
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 332 atttaaagaagaagctcaa 350
>emb|BX817339.1|CNS0AAUG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL16ZF02 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 955
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 281 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 340
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 341 atttaaagaagaagctcaa 359
>dbj|AK117469.1| Arabidopsis thaliana At1g08810 mRNA for putative transcription
factor, complete cds, clone: RAFL17-08-C21
Length = 1076
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 291 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 350
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 351 atttaaagaagaagctcaa 369
>emb|CS137506.1| Sequence 477 from Patent WO2005047516
Length = 949
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 283 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 342
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 343 atttaaagaagaagctcaa 361
>ref|NM_100755.2| Arabidopsis thaliana MYB60; DNA binding / transcription factor
AT1G08810 (MYB60) transcript variant AT1G08810.1 mRNA,
complete cds
Length = 1123
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 338 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 397
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 398 atttaaagaagaagctcaa 416
>ref|NM_202066.1| Arabidopsis thaliana MYB60; DNA binding AT1G08810 (MYB60)
transcript variant AT1G08810.2 mRNA, complete cds
Length = 953
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Plus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 171 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 230
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 231 atttaaagaagaagctcaa 249
>ref|NC_003070.5| Arabidopsis thaliana chromosome 1, complete sequence
Length = 30432563
Score = 61.9 bits (31), Expect = 8e-008
Identities = 67/79 (84%)
Strand = Plus / Minus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || |||||||||||||||||||| |
Sbjct: 2819853 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactggaacacac 2819794
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 2819793 atttaaagaagaagctcaa 2819775
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 6390258 agaaccgataacgagatcaagaactactggaacac 6390292
Score = 52.0 bits (26), Expect = 7e-005
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 213 cagagaaccgacaacgacatcaagaactactggaacac 250
||||| |||||||| || ||||||||||||||||||||
Sbjct: 28045733 cagaggaccgacaatgatatcaagaactactggaacac 28045770
Score = 46.1 bits (23), Expect = 0.005
Identities = 44/51 (86%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaagaagaag 266
||||| |||||||| |||||||| | |||||||| ||| |||||||||||
Sbjct: 24681355 agaacagacaacgaaatcaagaatcattggaacactcacatcaagaagaag 24681405
Score = 44.1 bits (22), Expect = 0.018
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 232 tcaagaactactggaacaccca 253
||||||||||||||||||||||
Sbjct: 24762032 tcaagaactactggaacaccca 24762053
Score = 42.1 bits (21), Expect = 0.071
Identities = 45/53 (84%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaagaagaagct 268
||||| || ||||| ||||||||||| |||||||| || |||||| ||||||
Sbjct: 8006729 agaacagataacgagatcaagaactattggaacactcatatcaagaggaagct 8006781
>gb|DN604581.1|DN604581 JCAt5g61420 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 619
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 290 agaacagacaacgagatcaagaactactggaacacgcatctcaa 333
>gb|DR751443.1|DR751443 06-L021127-065-005-F01-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 005-F01, mRNA sequence
Length = 796
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 366 agaacagacaacgagatcaagaactactggaacacgcatctcaa 409
>gb|AF175998.1|AF175998 Arabidopsis thaliana putative transcription factor (MYB28) mRNA,
complete cds
Length = 1101
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 295 agaacagacaacgagatcaagaactactggaacacgcatctcaa 338
>emb|AX506861.1| Sequence 1556 from Patent WO0216655
Length = 1101
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 295 agaacagacaacgagatcaagaactactggaacacgcatctcaa 338
>emb|AX651823.1| Sequence 679 from Patent WO03000898
Length = 1100
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 295 agaacagacaacgagatcaagaactactggaacacgcatctcaa 338
>gb|AY519643.1| Arabidopsis thaliana MYB transcription factor (At5g61420) mRNA,
complete cds
Length = 1101
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 295 agaacagacaacgagatcaagaactactggaacacgcatctcaa 338
>emb|BX830516.1|CNS0A289 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB88ZE08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1710
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 577 agaacagacaacgagatcaagaactactggaacacgcatctcaa 620
>dbj|AB010073.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFB13
Length = 80376
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 60839 agaacagacaacgagatcaagaactactggaacacgcatctcaa 60796
>dbj|BA000015.5| Arabidopsis thaliana DNA, chromosome 5, complete sequence
Length = 23810767
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 21925594 agaacagacaacgagatcaagaactactggaacacgcatctcaa 21925551
Score = 50.1 bits (25), Expect = 3e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 214 agagaaccgacaacgacatcaagaactactggaacac 250
||||||| |||||||| ||||||||||| ||||||||
Sbjct: 4758317 agagaacagacaacgagatcaagaactattggaacac 4758353
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||||||||| ||||| ||||| ||||||||
Sbjct: 23281631 agaaccgacaacgatatcaaaaactattggaacac 23281665
Score = 44.1 bits (22), Expect = 0.018
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 234 aagaactactggaacacccacctcaagaagaagctcaa 271
|||||||| |||||||| ||| | ||||||||||||||
Sbjct: 22245493 aagaactattggaacactcacttgaagaagaagctcaa 22245456
Score = 42.1 bits (21), Expect = 0.071
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 255 ctcaagaagaagctcaagaag 275
|||||||||||||||||||||
Sbjct: 3238859 ctcaagaagaagctcaagaag 3238839
Score = 40.1 bits (20), Expect = 0.28
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| || ||||| || ||||||||||||||||| || |||||
Sbjct: 2276607 agaacagataacgagattaagaactactggaacacgcatctcaa 2276650
>ref|NM_180910.1| Arabidopsis thaliana MYB28; DNA binding / transcription factor
AT5G61420 (MYB28) transcript variant AT5G61420.1 mRNA,
complete cds
Length = 1805
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 675 agaacagacaacgagatcaagaactactggaacacgcatctcaa 718
>ref|NM_125535.2| Arabidopsis thaliana MYB28; DNA binding / transcription factor
AT5G61420 (MYB28) transcript variant AT5G61420.2 mRNA,
complete cds
Length = 1425
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 295 agaacagacaacgagatcaagaactactggaacacgcatctcaa 338
>ref|NC_003076.4| Arabidopsis thaliana chromosome 5, complete sequence
Length = 26992728
Score = 56.0 bits (28), Expect = 5e-006
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| |||||||| |||||||||||||||||||| || |||||
Sbjct: 24707507 agaacagacaacgagatcaagaactactggaacacgcatctcaa 24707464
Score = 50.1 bits (25), Expect = 3e-004
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 214 agagaaccgacaacgacatcaagaactactggaacac 250
||||||| |||||||| ||||||||||| ||||||||
Sbjct: 4975344 agagaacagacaacgagatcaagaactattggaacac 4975380
Score = 46.1 bits (23), Expect = 0.005
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||||||||| ||||| ||||| ||||||||
Sbjct: 26340784 agaaccgacaacgatatcaaaaactattggaacac 26340818
Score = 44.1 bits (22), Expect = 0.018
Identities = 34/38 (89%)
Strand = Plus / Minus
Query: 234 aagaactactggaacacccacctcaagaagaagctcaa 271
|||||||| |||||||| ||| | ||||||||||||||
Sbjct: 25097406 aagaactattggaacactcacttgaagaagaagctcaa 25097369
Score = 42.1 bits (21), Expect = 0.071
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 255 ctcaagaagaagctcaagaag 275
|||||||||||||||||||||
Sbjct: 3425890 ctcaagaagaagctcaagaag 3425870
Score = 40.1 bits (20), Expect = 0.28
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacacccacctcaa 259
||||| || ||||| || ||||||||||||||||| || |||||
Sbjct: 2447570 agaacagataacgagattaagaactactggaacacgcatctcaa 2447613
>emb|AL091598.1|CNS00UY8 Arabidopsis thaliana genome survey sequence SP6 end of BAC T8E2 of
TAMU library from strain Columbia of Arabidopsis
thaliana, genomic survey sequence
Length = 660
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 423 agaaccgataacgagatcaagaactactggaacac 457
>emb|CR405437.1| Arabidopsis thaliana T-DNA flanking sequence GK-878E11-026470,
genomic survey sequence
Length = 439
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 337 agaaccgataacgagatcaagaactactggaacac 371
>emb|CR405438.1| Arabidopsis thaliana T-DNA flanking sequence GK-878E11-026524,
genomic survey sequence
Length = 451
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 329 agaaccgataacgagatcaagaactactggaacac 363
>gb|T22593.1|T22593 4601 Lambda-PRL2 Arabidopsis thaliana cDNA clone 99M15T7, mRNA
sequence
Length = 413
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 46 agaaccgataacgagatcaagaactactggaacac 80
>gb|T43937.1|T43937 7200 Lambda-PRL2 Arabidopsis thaliana cDNA clone 120D18T7, mRNA
sequence
Length = 407
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 49 agaaccgataacgagatcaagaactactggaacac 83
>gb|AI993846.1|AI993846 701515156 A. thaliana, Ohio State clone set Arabidopsis thaliana
cDNA clone 701515156, mRNA sequence
Length = 582
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 46 agaaccgataacgagatcaagaactactggaacac 80
>gb|AU238168.1|AU238168 AU238168 RAFL16 Arabidopsis thaliana cDNA clone RAFL16-90-B03 5',
mRNA sequence
Length = 639
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 577 agaaccgataacgagatcaagaactactggaacac 611
>gb|CB255433.1|CB255433 42-E012998-019-004-C12-T7R MPIZ-ADIS-019 Arabidopsis thaliana cDNA
clone MPIZp768C124Q 5-PRIME, mRNA sequence
Length = 666
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 554 agaaccgataacgagatcaagaactactggaacac 588
>gb|DN604613.1|DN604613 JCAt2g36890 Arabidopsis Gateway cDNA Library Arabidopsis thaliana
cDNA 3', mRNA sequence
Length = 392
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 228 gacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 305 gacatcaagaactattggaacactaagctcaagaagaagctca 347
>gb|DR749769.1|DR749769 92-L022342-065-009-D12-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-D12, mRNA sequence
Length = 886
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 228 gacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 383 gacatcaagaactattggaacactaagctcaagaagaagctca 425
>gb|DR749770.1|DR749770 92-L022343-065-009-D12-SeLB MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-D12, mRNA sequence
Length = 884
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 228 gacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 681 gacatcaagaactattggaacactaagctcaagaagaagctca 639
>gb|DR751187.1|DR751187 19-L022342-065-009-C03-SeLA MPIZ-ADIS-065d Arabidopsis thaliana
cDNA clone 009-C03, mRNA sequence
Length = 781
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 399 agaaccgataacgagatcaagaactactggaacac 433
>gb|AF062880.1|AF062880 Arabidopsis thaliana putative transcription factor (MYB38) mRNA,
partial cds
Length = 764
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 228 gacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 148 gacatcaagaactattggaacactaagctcaagaagaagctca 190
>gb|AF062887.1|AF062887 Arabidopsis thaliana putative transcription factor (MYB51) mRNA,
complete cds
Length = 1384
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 358 agaaccgataacgagatcaagaactactggaacac 392
>emb|AX506289.1| Sequence 984 from Patent WO0216655
Length = 897
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 228 gacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 310 gacatcaagaactattggaacactaagctcaagaagaagctca 352
>emb|AX507298.1| Sequence 1993 from Patent WO0216655
Length = 1059
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 298 agaaccgataacgagatcaagaactactggaacac 332
>emb|AX651296.1| Sequence 81 from Patent WO03000898
Length = 1059
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 298 agaaccgataacgagatcaagaactactggaacac 332
>gb|BT006244.1| Arabidopsis thaliana At1g18570 mRNA, complete cds
Length = 1059
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 298 agaaccgataacgagatcaagaactactggaacac 332
>gb|AC026238.2| Arabidopsis thaliana chromosome I BAC F25I16 genomic sequence, complete
sequence
Length = 44879
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 31037 agaaccgataacgagatcaagaactactggaacac 31003
>gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete
sequence
Length = 134151
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 228 gacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 47837 gacatcaagaactattggaacactaagctcaagaagaagctca 47879
>gb|AY519555.1| Arabidopsis thaliana MYB transcription factor (At1g18570) mRNA,
complete cds
Length = 1059
Score = 54.0 bits (27), Expect = 2e-005
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 216 agaaccgacaacgacatcaagaactactggaacac 250
|||||||| ||||| ||||||||||||||||||||
Sbjct: 298 agaaccgataacgagatcaagaactactggaacac 332
>gb|AY519577.1| Arabidopsis thaliana MYB transcription factor (At2g36890) mRNA,
complete cds
Length = 897
Score = 54.0 bits (27), Expect = 2e-005
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 228 gacatcaagaactactggaacacccacctcaagaagaagctca 270
|||||||||||||| |||||||| | ||||||||||||||||
Sbjct: 310 gacatcaagaactattggaacactaagctcaagaagaagctca 352
>emb|BX833897.1|CNS09YYU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTSIL82ZD05 of Silique of strain col-0 of Arabidopsis
thaliana (thale cress)
Length = 692
Score = 54.0 bits (27), Expect = 2e-005
Identities = 66/79 (83%)
Strand = Plus / Minus
Query: 193 ccattgcttcttacctcccgcagagaaccgacaacgacatcaagaactactggaacaccc 252
|||| ||||| ||||| || || ||||| ||||| || ||||||||||||||| |||| |
Sbjct: 503 ccatagcttcatacctaccacaaagaacggacaatgatatcaagaactactgggacacac 444
Query: 253 acctcaagaagaagctcaa 271
| | ||||||||||||||
Sbjct: 443 atttaaagaagaagctcaa 425
Database: At_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:09 PM
Number of letters in database: 908,940,872
Number of sequences in database: 1,013,581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 174,571
Number of Sequences: 1013581
Number of extensions: 174571
Number of successful extensions: 12159
Number of sequences better than 0.5: 225
Number of HSP's better than 0.5 without gapping: 236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10849
Number of HSP's gapped (non-prelim): 1310
length of query: 404
length of database: 908,940,872
effective HSP length: 20
effective length of query: 384
effective length of database: 888,669,252
effective search space: 341248992768
effective search space used: 341248992768
T: 0
A: 0
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)