BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 5351892.2.1
(466 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_467941.1| putative galactoside 2-alpha-L-fucosyltran... 133 2e-30
gb|AAF62896.1| xyloglucan fucosyltransferase [Pisum sativum... 116 2e-25
ref|XP_467945.1| putative galactoside 2-alpha-L-fucosyltran... 115 4e-25
ref|NP_178420.1| FUT2; fucosyltransferase/ transferase, tra... 111 5e-24
ref|NP_178421.1| FT1 (FUCOSYLTRANSFERASE 1); fucosyltransfe... 110 8e-24
gb|AAD41092.1| xyloglucan fucosyltransferase [Arabidopsis t... 110 8e-24
dbj|BAD35183.1| putative galactoside 2-alpha-L-fucosyltrans... 108 3e-23
ref|XP_467944.1| putative xyloglucan fucosyltransferase [Or... 102 4e-21
dbj|BAD35180.1| putative galactoside 2-alpha-L-fucosyltrans... 95 5e-19
dbj|BAD35174.1| putative galactoside 2-alpha-L-fucosyltrans... 91 9e-18
dbj|BAD38374.1| putative xyloglucan fucosyltransferase [Ory... 90 2e-17
ref|XP_464933.1| putative galactoside 2-alpha-L-fucosyltran... 89 4e-17
gb|AAD39294.1| Hypothetical protein [Arabidopsis thaliana] ... 86 3e-16
ref|NP_179137.1| FUT10; fucosyltransferase/ transferase, tr... 86 3e-16
ref|XP_462667.1| OSJNBa0064H22.19 [Oryza sativa (japonica c... 86 3e-16
dbj|BAD35178.1| putative galactoside 2-alpha-L-fucosyltrans... 84 1e-15
ref|XP_462666.1| OSJNBa0064H22.18 [Oryza sativa (japonica c... 84 1e-15
gb|AAD39292.1| Hypothetical protein [Arabidopsis thaliana] ... 83 2e-15
ref|NP_172859.1| FUT7; fucosyltransferase/ transferase, tra... 83 2e-15
gb|AAL50624.1| fucosyltransferase-like protein FUT5 [Arabid... 82 3e-15
ref|NP_179139.1| FUT5; fucosyltransferase/ transferase, tra... 82 3e-15
ref|XP_467938.1| putative xyloglucan fucosyltransferase [Or... 80 1e-14
ref|NP_172863.2| fucosyltransferase/ transferase, transferr... 80 2e-14
ref|NP_973468.1| FUT4; fucosyltransferase [Arabidopsis thal... 80 2e-14
ref|NP_179141.1| FUT4; fucosyltransferase/ transferase, tra... 80 2e-14
gb|AAD39295.1| Hypothetical protein [Arabidopsis thaliana] ... 79 3e-14
dbj|BAD35182.1| putative galactoside 2-alpha-L-fucosyltrans... 75 5e-13
gb|AAD39293.1| Hypothetical protein [Arabidopsis thaliana] ... 73 2e-12
gb|AAF79408.1| F16A14.28 [Arabidopsis thaliana] 73 2e-12
ref|NP_172860.1| FUT6; fucosyltransferase/ transferase, tra... 73 2e-12
ref|XP_467940.1| putative galactoside 2-alpha-L-fucosyltran... 69 3e-11
dbj|BAD35184.1| putative xyloglucan fucosyltransferase [Ory... 65 7e-10
dbj|BAD35175.1| putative galactoside 2-alpha-L-fucosyltrans... 59 3e-08
ref|NP_974142.1| FUT3; fucosyltransferase [Arabidopsis thal... 49 3e-05
gb|AAG52352.1| putative xyloglucan fucosyltransferase; 2623... 49 3e-05
dbj|BAD94179.1| fucosyltransferase-like protein FUT3 [Arabi... 49 3e-05
ref|NP_177582.3| FUT3; fucosyltransferase/ transferase, tra... 49 3e-05
ref|XP_481719.1| putative xyloglucan fucosyltransferase [Or... 47 1e-04
gb|AAW61164.1| Putative hydrolase [Gluconobacter oxydans 62... 35 0.56
dbj|BAB59715.1| hypothetical protein [Thermoplasma volcaniu... 33 1.6
dbj|BAD63738.1| conserved hypothetical protein [Bacillus cl... 33 2.1
dbj|BAA23674.1| GTBP-N [Homo sapiens] 32 4.7
gb|AAB47425.1| bacterial MutS homolog [Homo sapiens] 32 4.7
ref|NP_000170.1| mutS homolog 6 [Homo sapiens] >gi|13279008... 32 4.7
ref|XP_515462.1| PREDICTED: hypothetical protein XP_515462 ... 32 4.7
gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens] 32 4.7
gb|EAL30682.1| GA12303-PA [Drosophila pseudoobscura] 32 4.7
ref|ZP_00807143.1| Negative transcriptional regulator [Rhod... 32 6.2
ref|ZP_01094312.1| Rieske (2Fe-2S) region protein [Blastopi... 32 6.2
>ref|XP_467941.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD17109.1| putative galactoside 2-alpha-L-fucosyltransferase / xyloglucan
alpha-(1,2)-fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
dbj|BAD17224.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 533
Score = 133 bits (334), Expect = 2e-30
Identities = 55/70 (78%), Positives = 64/70 (91%)
Frame = +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL PWIM +SENH PDPPC RAMSIEPCFHQAPFYDCKA+++ DLGK+VP+VRHCEDV
Sbjct: 462 SGLTPWIMFRSENHAMPDPPCRRAMSIEPCFHQAPFYDCKAKRNADLGKMVPFVRHCEDV 521
Query: 189 SWGLKIVDQT 218
SWGLK+V+QT
Sbjct: 522 SWGLKVVNQT 531
>gb|AAF62896.1| xyloglucan fucosyltransferase [Pisum sativum]
sp|Q9M5Q1|FUT1_PEA Galactoside 2-alpha-L-fucosyltransferase (Xyloglucan
alpha-(1,2)-fucosyltransferase) (PsFT1)
Length = 565
Score = 116 bits (290), Expect = 2e-25
Identities = 47/67 (70%), Positives = 56/67 (83%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPWI+ K EN P+PPC RAMS+EPCFH PFYDCKA++ TD G +VP+VRHCED+S
Sbjct: 498 GLKPWILYKPENRTAPNPPCQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMS 557
Query: 192 WGLKIVD 212
WGLK+VD
Sbjct: 558 WGLKLVD 564
>ref|XP_467945.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD17113.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 572
Score = 115 bits (287), Expect = 4e-25
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
+GL+PW++ K EN + PDPPC + +S+EPCFH PFYDCKA++ D GK VPYV HCED+
Sbjct: 501 SGLRPWLLFKPENRIAPDPPCRQVLSMEPCFHAPPFYDCKAKRGADTGKFVPYVSHCEDM 560
Query: 189 SWGLKIVDQT 218
SWGLK+VDQ+
Sbjct: 561 SWGLKLVDQS 570
>ref|NP_178420.1| FUT2; fucosyltransferase/ transferase, transferring glycosyl groups
[Arabidopsis thaliana]
gb|AAC34481.1| unknown protein [Arabidopsis thaliana]
sp|O81053|FUT2_ARATH Probable fucosyltransferase 2 (AtFUT2)
Length = 539
Score = 111 bits (278), Expect = 5e-24
Identities = 45/67 (67%), Positives = 54/67 (80%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL+ WI+ K EN P+PPC RAMS +PCFH P+YDCKA+K TD G VVP+VRHCED+S
Sbjct: 471 GLRAWILYKQENQTNPNPPCGRAMSPDPCFHAPPYYDCKAKKGTDTGNVVPHVRHCEDIS 530
Query: 192 WGLKIVD 212
WGLK+VD
Sbjct: 531 WGLKLVD 537
>ref|NP_178421.1| FT1 (FUCOSYLTRANSFERASE 1); fucosyltransferase/ transferase,
transferring glycosyl groups [Arabidopsis thaliana]
gb|AAM98135.1| unknown protein [Arabidopsis thaliana]
gb|AAC34480.1| unknown protein [Arabidopsis thaliana]
gb|AAO30064.1| unknown protein [Arabidopsis thaliana]
gb|AAO00837.1| unknown protein [Arabidopsis thaliana]
sp|Q9SWH5|FUT1_ARATH Galactoside 2-alpha-L-fucosyltransferase (Xyloglucan
alpha-(1,2)-fucosyltransferase) (AtFUT1)
Length = 558
Score = 110 bits (276), Expect = 8e-24
Identities = 45/66 (68%), Positives = 53/66 (80%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPWI+ + EN TPDP C RAMS+EPCFH PFYDCKA+ D G +VP+VRHCED+S
Sbjct: 493 GLKPWILYRPENRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDIS 552
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 553 WGLKLV 558
>gb|AAD41092.1| xyloglucan fucosyltransferase [Arabidopsis thaliana]
Length = 558
Score = 110 bits (276), Expect = 8e-24
Identities = 45/66 (68%), Positives = 53/66 (80%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPWI+ + EN TPDP C RAMS+EPCFH PFYDCKA+ D G +VP+VRHCED+S
Sbjct: 493 GLKPWILYRPENRTTPDPSCGRAMSMEPCFHSPPFYDCKAKTGIDTGTLVPHVRHCEDIS 552
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 553 WGLKLV 558
>dbj|BAD35183.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD35724.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 565
Score = 108 bits (271), Expect = 3e-23
Identities = 43/66 (65%), Positives = 53/66 (80%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW+M K EN TPDPPC RA+S+EPC H PFYDC+ ++ D GK+VP+VRHCED+S
Sbjct: 497 GLSPWVMFKPENLTTPDPPCRRAVSMEPCLHGPPFYDCRVKRGADTGKLVPHVRHCEDMS 556
Query: 192 WGLKIV 209
WGLK+V
Sbjct: 557 WGLKLV 562
>ref|XP_467944.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
dbj|BAD17112.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 608
Score = 102 bits (253), Expect = 4e-21
Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +3
Query: 12 GLKPWIMLKSEN-HVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
GL+PW+M K N PDPPC R +S+EPCFH PFYDCK ++ D G ++P+VRHC+DV
Sbjct: 535 GLRPWVMYKPVNITAVPDPPCGRDVSMEPCFHSPPFYDCKTKRGVDTGTILPHVRHCDDV 594
Query: 189 SWGLKIVD 212
SWGLK+VD
Sbjct: 595 SWGLKLVD 602
>dbj|BAD35180.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD35721.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 591
Score = 95.1 bits (235), Expect = 5e-19
Identities = 40/71 (56%), Positives = 50/71 (70%), Gaps = 4/71 (5%)
Frame = +3
Query: 9 AGLKPWIMLKSENHVTP----DPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRH 176
AGL PW+M K N DPPC R +S+EPCFH PFYDC+ ++ D GK+VP+VRH
Sbjct: 518 AGLTPWVMHKPANDTAAAAGDDPPCRRDVSMEPCFHAPPFYDCRLKRGADTGKMVPHVRH 577
Query: 177 CEDVSWGLKIV 209
C+DV WGLK+V
Sbjct: 578 CDDVQWGLKLV 588
>dbj|BAD35174.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD35715.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 565
Score = 90.9 bits (224), Expect = 9e-18
Identities = 39/70 (55%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKAR---KDTDLGKVVPYVRHCE 182
GL P+IM+K ENH P+PPCVRAMS+EPC H P+++C + K D G +VP+VR CE
Sbjct: 493 GLTPYIMIKPENHTVPNPPCVRAMSMEPCDHGPPYFECTKKEIDKIIDTGNLVPHVRSCE 552
Query: 183 DVSWGLKIVD 212
DV WG K+ D
Sbjct: 553 DVPWGRKLAD 562
>dbj|BAD38374.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 552
Score = 89.7 bits (221), Expect = 2e-17
Identities = 38/69 (55%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 AGLKPWIMLKSENHV-TPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED 185
AG+KPW++L N + +PPC++ S+EPCFH P YDC+A+KD DLG V+ +VRHCED
Sbjct: 484 AGVKPWLLLTPTNRTASANPPCIQTTSMEPCFHAPPSYDCRAKKDGDLGAVLRHVRHCED 543
Query: 186 VSWGLKIVD 212
V GLK+ D
Sbjct: 544 VGDGLKLYD 552
>ref|XP_464933.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD21846.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD21810.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 601
Score = 88.6 bits (218), Expect = 4e-17
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 7/75 (9%)
Frame = +3
Query: 9 AGLKPWIML------KSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKD-TDLGKVVPY 167
AGL+PWIM K PDPPC R + EPCFH +Y+C AR++ D+GKVVPY
Sbjct: 520 AGLRPWIMPRRPWWEKEAATAVPDPPCARVATPEPCFHSPSYYECAARRNYDDIGKVVPY 579
Query: 168 VRHCEDVSWGLKIVD 212
VR CEDVSWG+++V+
Sbjct: 580 VRRCEDVSWGIQLVN 594
>gb|AAD39294.1| Hypothetical protein [Arabidopsis thaliana]
pir||D86274 hypothetical protein F7A19.18 [imported] - Arabidopsis thaliana
sp|Q9XI78|FUT8_ARATH Probable fucosyltransferase 8 (AtFUT8)
Length = 500
Score = 85.9 bits (211), Expect = 3e-16
Identities = 37/67 (55%), Positives = 49/67 (73%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPWI+ K +NH P+PPCVRA+S+EPCF +AP Y C+A+K + P+V +CED
Sbjct: 436 GLKPWILYKPKNHTAPEPPCVRAVSMEPCFLRAPLYGCQAKK----VNITPFVMYCEDRI 491
Query: 192 WGLKIVD 212
GLK+VD
Sbjct: 492 TGLKLVD 498
>ref|NP_179137.1| FUT10; fucosyltransferase/ transferase, transferring glycosyl
groups [Arabidopsis thaliana]
gb|AAD22289.1| unknown protein [Arabidopsis thaliana]
pir||H84527 hypothetical protein At2g15350 [imported] - Arabidopsis thaliana
sp|Q9SJP6|FU10_ARATH Putative fucosyltransferase 10 (AtFUT10)
Length = 440
Score = 85.9 bits (211), Expect = 3e-16
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPW++ + N TP+PPCVR+ S+EPC+H P + C+A T+ GK++P+VRHCED+
Sbjct: 371 GLKPWLLYQPVNFTTPNPPCVRSKSMEPCYHTPPSHGCEADWGTNSGKILPFVRHCEDMM 430
Query: 192 W-GLKIVD 212
+ GLK+ D
Sbjct: 431 YGGLKLYD 438
>ref|XP_462667.1| OSJNBa0064H22.19 [Oryza sativa (japonica cultivar-group)]
emb|CAD40864.2| OSJNBa0064H22.19 [Oryza sativa (japonica cultivar-group)]
Length = 582
Score = 85.9 bits (211), Expect = 3e-16
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
AGL+PW+++ + PDPPC A +IEPCFH P YDC+ R D GK+V ++RHCED
Sbjct: 515 AGLRPWVLMSPLDKKVPDPPCRLAATIEPCFHNPPNYDCRTRAKGDTGKIVRHIRHCEDF 574
Query: 189 SWGLKIVD 212
G+++VD
Sbjct: 575 ENGVQLVD 582
>dbj|BAD35178.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD35719.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 556
Score = 83.6 bits (205), Expect = 1e-15
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GL PW++ + E + T PPC R MS+EPCFH AP YDCK +D GK+VP+VRHC D+
Sbjct: 489 GLTPWVLPRREVNGTA-PPCRRDMSMEPCFHVAPLYDCKRWEDA--GKIVPHVRHCHDMP 545
Query: 192 WGLKIVDQT 218
GLK+VD+T
Sbjct: 546 AGLKLVDRT 554
>ref|XP_462666.1| OSJNBa0064H22.18 [Oryza sativa (japonica cultivar-group)]
emb|CAD40865.2| OSJNBa0064H22.18 [Oryza sativa (japonica cultivar-group)]
Length = 580
Score = 83.6 bits (205), Expect = 1e-15
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV 188
AGL+PW+++ P+PPC A ++EPCFH P YDC+AR D GK V +VRHCED+
Sbjct: 513 AGLRPWVLMVPVRKKAPNPPCRLAATVEPCFHTPPHYDCQARTKGDNGKTVRHVRHCEDL 572
Query: 189 SWGLKIVD 212
G+++VD
Sbjct: 573 KDGVQLVD 580
>gb|AAD39292.1| Hypothetical protein [Arabidopsis thaliana]
sp|Q9XI81|FUT7_ARATH Probable fucosyltransferase 7 (AtFUT7)
Length = 526
Score = 82.8 bits (203), Expect = 2e-15
Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV- 188
GLKPWI+ + +P+PPC R +S+EPCF P + C+A+K + K+VP+VRHCED+
Sbjct: 453 GLKPWILYTPKKFKSPNPPCGRVISMEPCFLTPPVHGCEAKKGINTAKIVPFVRHCEDLR 512
Query: 189 SWGLKIVDQT 218
+GLK+VD T
Sbjct: 513 HYGLKLVDDT 522
>ref|NP_172859.1| FUT7; fucosyltransferase/ transferase, transferring glycosyl groups
[Arabidopsis thaliana]
Length = 509
Score = 82.8 bits (203), Expect = 2e-15
Identities = 35/70 (50%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDV- 188
GLKPWI+ + +P+PPC R +S+EPCF P + C+A+K + K+VP+VRHCED+
Sbjct: 436 GLKPWILYTPKKFKSPNPPCGRVISMEPCFLTPPVHGCEAKKGINTAKIVPFVRHCEDLR 495
Query: 189 SWGLKIVDQT 218
+GLK+VD T
Sbjct: 496 HYGLKLVDDT 505
>gb|AAL50624.1| fucosyltransferase-like protein FUT5 [Arabidopsis thaliana]
Length = 515
Score = 82.4 bits (202), Expect = 3e-15
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPW++ + N TP+PPCVR+ S+EPC+ P + C+A T+ GK++P+VRHCED+
Sbjct: 446 GLKPWLLYQPTNFTTPNPPCVRSKSMEPCYLTPPSHGCEADWGTNSGKILPFVRHCEDLI 505
Query: 192 W-GLKIVDQ 215
+ GLK+ D+
Sbjct: 506 YGGLKLYDE 514
>ref|NP_179139.1| FUT5; fucosyltransferase/ transferase, transferring glycosyl groups
[Arabidopsis thaliana]
gb|AAD22287.1| unknown protein [Arabidopsis thaliana]
sp|Q9SJP4|FUT5_ARATH Probable fucosyltransferase 5 (AtFUT5)
Length = 533
Score = 82.4 bits (202), Expect = 3e-15
Identities = 34/69 (49%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPW++ + N TP+PPCVR+ S+EPC+ P + C+A T+ GK++P+VRHCED+
Sbjct: 464 GLKPWLLYQPTNFTTPNPPCVRSKSMEPCYLTPPSHGCEADWGTNSGKILPFVRHCEDLI 523
Query: 192 W-GLKIVDQ 215
+ GLK+ D+
Sbjct: 524 YGGLKLYDE 532
>ref|XP_467938.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
dbj|BAD17106.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
dbj|BAD17221.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 575
Score = 80.5 bits (197), Expect = 1e-14
Identities = 34/69 (49%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 AGLKPWIMLKSE-NHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED 185
AG+KPWI+L+ + + + CVR+ S+EPC H P C+A+K+ D V PYVRHCED
Sbjct: 506 AGVKPWILLRPDWDKERSEVACVRSTSVEPCLHSPPILSCRAKKEVDAATVKPYVRHCED 565
Query: 186 VSWGLKIVD 212
V +GLK+ D
Sbjct: 566 VGFGLKLFD 574
>ref|NP_172863.2| fucosyltransferase/ transferase, transferring glycosyl groups
[Arabidopsis thaliana]
Length = 907
Score = 80.1 bits (196), Expect = 2e-14
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPWI+ K +NH P+PPCVRA+S+EPCF +AP Y C+A+K + P+V +CED
Sbjct: 452 GLKPWILYKPKNHTAPEPPCVRAVSMEPCFLRAPLYGCQAKK----VNITPFVMYCEDRI 507
Query: 192 WGLKIVDQ 215
GL +Q
Sbjct: 508 TGLNDSEQ 515
Score = 79.0 bits (193), Expect = 3e-14
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPWI+ + + TP+PPCVRAMS+EPCF +AP + C+A+ K+ P+VR CED
Sbjct: 840 GLKPWILYEPRDKKTPNPPCVRAMSMEPCFLRAPLHGCQAKTI----KIPPFVRICEDWK 895
Query: 192 WGLKIVD 212
GLK+VD
Sbjct: 896 TGLKLVD 902
>ref|NP_973468.1| FUT4; fucosyltransferase [Arabidopsis thaliana]
Length = 500
Score = 79.7 bits (195), Expect = 2e-14
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARK-DTDLGKVVPYVRHCEDV 188
GLKPW++ ++ PDPPCVR+ S+EPCF P + C+ T+ GKVVP+VR+CED+
Sbjct: 432 GLKPWLLYLPNDNKAPDPPCVRSTSMEPCFLTPPTHGCEPDAWGTESGKVVPFVRYCEDI 491
Query: 189 SWGLKIVDQ 215
WGLK+ D+
Sbjct: 492 -WGLKLFDE 499
>ref|NP_179141.1| FUT4; fucosyltransferase/ transferase, transferring glycosyl groups
[Arabidopsis thaliana]
gb|AAD22285.1| unknown protein [Arabidopsis thaliana]
gb|AAL50623.1| fucosyltransferase-like protein FUT4 [Arabidopsis thaliana]
sp|Q9SJP2|FUT4_ARATH Probable fucosyltransferase 4 (AtFUT4)
Length = 503
Score = 79.7 bits (195), Expect = 2e-14
Identities = 35/69 (50%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARK-DTDLGKVVPYVRHCEDV 188
GLKPW++ ++ PDPPCVR+ S+EPCF P + C+ T+ GKVVP+VR+CED+
Sbjct: 435 GLKPWLLYLPNDNKAPDPPCVRSTSMEPCFLTPPTHGCEPDAWGTESGKVVPFVRYCEDI 494
Query: 189 SWGLKIVDQ 215
WGLK+ D+
Sbjct: 495 -WGLKLFDE 502
>gb|AAD39295.1| Hypothetical protein [Arabidopsis thaliana]
sp|Q9XI77|FUT9_ARATH Probable fucosyltransferase 9 (AtFUT9)
Length = 435
Score = 79.0 bits (193), Expect = 3e-14
Identities = 36/67 (53%), Positives = 48/67 (71%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCEDVS 191
GLKPWI+ + + TP+PPCVRAMS+EPCF +AP + C+A+ K+ P+VR CED
Sbjct: 368 GLKPWILYEPRDKKTPNPPCVRAMSMEPCFLRAPLHGCQAKTI----KIPPFVRICEDWK 423
Query: 192 WGLKIVD 212
GLK+VD
Sbjct: 424 TGLKLVD 430
>dbj|BAD35182.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD35723.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 591
Score = 75.1 bits (183), Expect = 5e-13
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Frame = +3
Query: 9 AGLKPWIMLK--SENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCE 182
AGL P +M K +E+ PDPPC R +S+EPCF P+ +C+ ++ GKVV +V++C
Sbjct: 519 AGLTPRVMYKPANESSAVPDPPCRRDVSMEPCFLTPPYNNCRMKRSAHSGKVVAHVKNCH 578
Query: 183 DVSWGLKIV 209
DV WGLK+V
Sbjct: 579 DVPWGLKLV 587
>gb|AAD39293.1| Hypothetical protein [Arabidopsis thaliana]
sp|Q9XI80|FUT6_ARATH Fucosyltransferase 6 (AtFUT6)
Length = 537
Score = 72.8 bits (177), Expect = 2e-12
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED-V 188
GLKPW++ + PDPPC+++ S++PC P + C+ T+ GKVVP+VRHCED
Sbjct: 468 GLKPWLLYQPTGPTAPDPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 527
Query: 189 SWGLKIVDQ 215
+ GLK+ D+
Sbjct: 528 NDGLKLFDE 536
>gb|AAF79408.1| F16A14.28 [Arabidopsis thaliana]
Length = 1117
Score = 72.8 bits (177), Expect = 2e-12
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED-V 188
GLKPW++ + PDPPC+++ S++PC P + C+ T+ GKVVP+VRHCED
Sbjct: 1048 GLKPWLLYQPTGPTAPDPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 1107
Query: 189 SWGLKIVDQ 215
+ GLK+ D+
Sbjct: 1108 NDGLKLFDE 1116
Score = 60.8 bits (146), Expect = 9e-09
Identities = 24/54 (44%), Positives = 36/54 (66%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVR 173
GLKPWI+ + +P+PPC R +S+EPCF P + C+A+K + K+VP+ R
Sbjct: 466 GLKPWILYTPKKFKSPNPPCGRVISMEPCFLTPPVHGCEAKKGINTAKIVPFNR 519
>ref|NP_172860.1| FUT6; fucosyltransferase/ transferase, transferring glycosyl groups
[Arabidopsis thaliana]
gb|AAP68320.1| At1g14080 [Arabidopsis thaliana]
gb|AAO00849.1| xyloglucan fucosyltransferase, putative [Arabidopsis thaliana]
Length = 519
Score = 72.8 bits (177), Expect = 2e-12
Identities = 31/69 (44%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED-V 188
GLKPW++ + PDPPC+++ S++PC P + C+ T+ GKVVP+VRHCED
Sbjct: 450 GLKPWLLYQPTGPTAPDPPCIQSTSMDPCHLTPPSHGCEPEWGTNSGKVVPFVRHCEDRG 509
Query: 189 SWGLKIVDQ 215
+ GLK+ D+
Sbjct: 510 NDGLKLFDE 518
>ref|XP_467940.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD17108.1| putative galactoside 2-alpha-L-fucosyltransferase / xyloglucan
alpha-(1,2)-fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
dbj|BAD17223.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 382
Score = 68.9 bits (167), Expect = 3e-11
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Frame = +3
Query: 9 AGLKPWIMLKSENHVT-PDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED 185
AG++PW++L+ + V +P CVR+ ++EPC P C A + +D+G +VP++RHCED
Sbjct: 314 AGVRPWVLLRPPSPVARAEPACVRSETVEPCLQALPRRMCGAAEGSDIGALVPHIRHCED 373
Query: 186 VSWGLKI 206
V G+K+
Sbjct: 374 VQKGIKL 380
>dbj|BAD35184.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
dbj|BAD35725.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 548
Score = 64.7 bits (156), Expect = 7e-10
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +3
Query: 9 AGLKPWIMLKSE-NHVTPDPPCVRAMSIEPCFHQAPFYDCKARKDTDLGKVVPYVRHCED 185
AG++PW + + + D C R S+EPC H P C+AR+D D +P++RHCED
Sbjct: 480 AGVRPWQLAPLDWGKMRADVACARPASVEPCLHSPPPLVCRARRDRDPAAHLPFLRHCED 539
Query: 186 VSWGLKIVD 212
V GLK+ D
Sbjct: 540 VPAGLKLFD 548
>dbj|BAD35175.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
dbj|BAD35716.1| putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa
(japonica cultivar-group)]
Length = 565
Score = 59.3 bits (142), Expect = 3e-08
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Frame = +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAP--FYDCKARKDTDLGKVVPYVRHCE 182
AGL+P ++L + NH P PCVRA+S+EPCFH+ P C+ + V +++ CE
Sbjct: 497 AGLRPAMLLTAFNHKVPRTPCVRAVSMEPCFHKPPPAAATCQGKLAVS-ENVTRHIKRCE 555
Query: 183 DVSWGLKIVD 212
D++ G+K+ D
Sbjct: 556 DLAGGIKLFD 565
>ref|NP_974142.1| FUT3; fucosyltransferase [Arabidopsis thaliana]
Length = 525
Score = 49.3 bits (116), Expect = 3e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCK 128
GLKPW++ K+EN +P CV+A SIEPC F+ CK
Sbjct: 486 GLKPWVLNKAENGTAHEPYCVKARSIEPCSQATLFHGCK 524
>gb|AAG52352.1| putative xyloglucan fucosyltransferase; 26230-24341 [Arabidopsis
thaliana]
pir||A96773 hypothetical protein F1M20.10 [imported] - Arabidopsis thaliana
Length = 562
Score = 49.3 bits (116), Expect = 3e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCK 128
GLKPW++ K+EN +P CV+A SIEPC F+ CK
Sbjct: 523 GLKPWVLNKAENGTAHEPYCVKARSIEPCSQATLFHGCK 561
>dbj|BAD94179.1| fucosyltransferase-like protein FUT3 [Arabidopsis thaliana]
gb|AAL50622.1| fucosyltransferase-like protein FUT3 [Arabidopsis thaliana]
sp|Q9CA71|FUT3_ARATH Probable fucosyltransferase 3 (AtFUT3)
Length = 493
Score = 49.3 bits (116), Expect = 3e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCK 128
GLKPW++ K+EN +P CV+A SIEPC F+ CK
Sbjct: 454 GLKPWVLNKAENGTAHEPYCVKARSIEPCSQATLFHGCK 492
>ref|NP_177582.3| FUT3; fucosyltransferase/ transferase, transferring glycosyl groups
[Arabidopsis thaliana]
dbj|BAD44473.1| fucosyltransferase-like protein FUT3 [Arabidopsis thaliana]
dbj|BAD43182.1| fucosyltransferase-like protein FUT3 [Arabidopsis thaliana]
Length = 521
Score = 49.3 bits (116), Expect = 3e-05
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 12 GLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFYDCK 128
GLKPW++ K+EN +P CV+A SIEPC F+ CK
Sbjct: 482 GLKPWVLNKAENGTAHEPYCVKARSIEPCSQATLFHGCK 520
>ref|XP_481719.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
dbj|BAD01766.1| putative xyloglucan fucosyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 596
Score = 47.0 bits (110), Expect = 1e-04
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +3
Query: 9 AGLKPWIMLKSENHVTPDPPCVRAMSIEPCFHQAPFY---DCKARKD-TDLGKVVPYVRH 176
AG++P I++ + H P PPC RA+S+EPC P +C+ D V +V+
Sbjct: 525 AGVRPTILMPAHGHRVPAPPCRRAVSMEPCNLTPPRVGEAECREMAAVVDKEDVARHVKV 584
Query: 177 CEDVSWGLKIVD 212
CED G+K D
Sbjct: 585 CEDFDRGVKFFD 596
>gb|AAW61164.1| Putative hydrolase [Gluconobacter oxydans 621H]
ref|YP_191820.1| Putative hydrolase [Gluconobacter oxydans 621H]
Length = 315
Score = 35.0 bits (79), Expect = 0.56
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = -3
Query: 242 QITATLQMSLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSL 105
Q++AT + L+ +P A V+ +P+V H LA +GV P +GSL
Sbjct: 256 QVSATADLPLLKASDPKAQVVLLPNVTHPLADLGVAP---AADGSL 298
>dbj|BAB59715.1| hypothetical protein [Thermoplasma volcanium GSS1]
ref|NP_111093.1| Predicted SAM-dependent methyltransferase [Thermoplasma volcanium
GSS1]
Length = 381
Score = 33.5 bits (75), Expect = 1.6
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Frame = -3
Query: 251 SPDQITATLQM-SLIYNLEP--PAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGH 81
SP I +Q + I++L P PA + + R Y++ GVL R V GSL EA H
Sbjct: 171 SPLDIMEKIQAEAFIFDLPPRMPASTINIDGEREYISVDGVLSRFTVYTGSLKEAEYSAH 230
>dbj|BAD63738.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
ref|YP_174699.1| hypothetical protein ABC1200 [Bacillus clausii KSM-K16]
Length = 171
Score = 33.1 bits (74), Expect = 2.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 123 CKARKDTDLGKVVPYVRHCEDVSWGL 200
CK KD +L K++PY H + WG+
Sbjct: 121 CKTLKDEELDKIIPYNDHTATIGWGI 146
>dbj|BAA23674.1| GTBP-N [Homo sapiens]
Length = 1360
Score = 32.0 bits (71), Expect = 4.7
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = -2
Query: 462 FLSDDHIVNMFLFLLTSEDEQINGSVYQLSTLGSNTGGKEYILYGSFVSQXXXXXXXXNS 283
F DD I N L + E+EQ NG Y + G N GGK + + Q
Sbjct: 1103 FFGDDFIPNDIL-IGCEEEEQENGKAYCVLVTGPNMGGK-----STLMRQAGLLAVMAQM 1156
Query: 282 SALVSKQVCRES*PDYSYT 226
V +VCR + D +T
Sbjct: 1157 GCYVPAEVCRLTPIDRVFT 1175
>gb|AAB47425.1| bacterial MutS homolog [Homo sapiens]
Length = 1360
Score = 32.0 bits (71), Expect = 4.7
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = -2
Query: 462 FLSDDHIVNMFLFLLTSEDEQINGSVYQLSTLGSNTGGKEYILYGSFVSQXXXXXXXXNS 283
F DD I N L + E+EQ NG Y + G N GGK + + Q
Sbjct: 1103 FFGDDFIPNDIL-IGCEEEEQENGKAYCVLVTGPNMGGK-----STLMRQAGLLAVMAQM 1156
Query: 282 SALVSKQVCRES*PDYSYT 226
V +VCR + D +T
Sbjct: 1157 GCYVPAEVCRLTPIDRVFT 1175
>ref|NP_000170.1| mutS homolog 6 [Homo sapiens]
gb|AAH04246.1| MutS homolog 6 [Homo sapiens]
gb|AAB39212.2| hMSH6 protein [Homo sapiens]
sp|P52701|MSH6_HUMAN DNA mismatch repair protein MSH6 (MutS-alpha 160 kDa subunit) (G/T
mismatch binding protein) (GTBP) (GTMBP) (p160)
gb|AAC50461.1| G/T mismatch binding protein
Length = 1360
Score = 32.0 bits (71), Expect = 4.7
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = -2
Query: 462 FLSDDHIVNMFLFLLTSEDEQINGSVYQLSTLGSNTGGKEYILYGSFVSQXXXXXXXXNS 283
F DD I N L + E+EQ NG Y + G N GGK + + Q
Sbjct: 1103 FFGDDFIPNDIL-IGCEEEEQENGKAYCVLVTGPNMGGK-----STLMRQAGLLAVMAQM 1156
Query: 282 SALVSKQVCRES*PDYSYT 226
V +VCR + D +T
Sbjct: 1157 GCYVPAEVCRLTPIDRVFT 1175
>ref|XP_515462.1| PREDICTED: hypothetical protein XP_515462 [Pan troglodytes]
Length = 1416
Score = 32.0 bits (71), Expect = 4.7
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = -2
Query: 462 FLSDDHIVNMFLFLLTSEDEQINGSVYQLSTLGSNTGGKEYILYGSFVSQXXXXXXXXNS 283
F DD I N L + E+EQ NG Y + G N GGK + + Q
Sbjct: 1159 FFGDDFIPNDIL-IGCEEEEQENGKAYCVLVTGPNMGGK-----STLMRQAGLLAVMAQM 1212
Query: 282 SALVSKQVCRES*PDYSYT 226
V +VCR + D +T
Sbjct: 1213 GCYVPAEVCRLTPIDRVFT 1231
>gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens]
Length = 1358
Score = 32.0 bits (71), Expect = 4.7
Identities = 24/79 (30%), Positives = 32/79 (40%)
Frame = -2
Query: 462 FLSDDHIVNMFLFLLTSEDEQINGSVYQLSTLGSNTGGKEYILYGSFVSQXXXXXXXXNS 283
F DD I N L + E+EQ NG Y + G N GGK + + Q
Sbjct: 1103 FFGDDFIPNDIL-IGCEEEEQENGKAYCVLVTGPNMGGK-----STLMRQAGLLAVMAQM 1156
Query: 282 SALVSKQVCRES*PDYSYT 226
V +VCR + D +T
Sbjct: 1157 GCYVPAEVCRLTPIDRVFT 1175
>gb|EAL30682.1| GA12303-PA [Drosophila pseudoobscura]
Length = 241
Score = 32.0 bits (71), Expect = 4.7
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = -3
Query: 218 SLIYNLEPPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGHGADARWVWRH 51
S++ ++EP + VP V + + V+P +AV+ L + + G W+WRH
Sbjct: 168 SIVSDVEPVPVPVPVPEVA-VIPEEPVIPDVAVLPEELADPVVSAQGFGIAWIWRH 222
>ref|ZP_00807143.1| Negative transcriptional regulator [Rhodopseudomonas palustris
BisB5]
gb|EAO83383.1| Negative transcriptional regulator [Rhodopseudomonas palustris
BisB5]
Length = 304
Score = 31.6 bits (70), Expect = 6.2
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 245 DQITATLQMSLIYNLE-PPAHVLAVPHVRHYLAQIGVLPRLAVVEGSLMEARLDGHGADA 69
D+++A + SL L PA + A A +GV+ R+ VVEGS +L+ H +DA
Sbjct: 204 DEVSAVFESSLARELPWTPAKMTAGRRSAMKKAIVGVMMRVDVVEGSF---KLNQHKSDA 260
Query: 68 RWVWRHVVLRLKHDPRLQA 12
V L + DP QA
Sbjct: 261 DHVAVANALARQADPAAQA 279
>ref|ZP_01094312.1| Rieske (2Fe-2S) region protein [Blastopirellula marina DSM 3645]
gb|EAQ77018.1| Rieske (2Fe-2S) region protein [Blastopirellula marina DSM 3645]
Length = 172
Score = 31.6 bits (70), Expect = 6.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 138 DTDLGKVVPYVRHCEDVSWGLKIVDQTHL*CSCNLVRTHGRLAC 269
D D GK+ YVR ++ + + ++ THL C N + G C
Sbjct: 81 DGDAGKIAVYVRRADEEKFQIFAINCTHLGCPVNWLADAGLFMC 124
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 909,754,212
Number of Sequences: 3454138
Number of extensions: 16167711
Number of successful extensions: 39820
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 38963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39762
length of database: 1,185,965,366
effective HSP length: 130
effective length of database: 736,927,426
effective search space used: 17686258224
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)