BLAST Search Results

BLASTX 2.2.6 [Apr-09-2003]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3023663.2.1
         (613 letters)

Database: nr 
           3,454,138 sequences; 1,185,965,366 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_472685.1|  OSJNBa0086B14.27 [Oryza sativa (japonica c...   179   6e-44
emb|CAE04367.1|  OSJNBa0027G07.1 [Oryza sativa (japonica cul...   179   6e-44
ref|NP_173645.3|  unknown protein [Arabidopsis thaliana] >gi...   105   9e-22
ref|NP_564164.1|  unknown protein [Arabidopsis thaliana] >gi...    94   3e-18
gb|AAF87264.1|  EST gb|F14399 comes from this gene. [Arabido...    64   5e-09
gb|AAF87847.1|  F16L1.1 [Arabidopsis thaliana]                     54   4e-06
ref|XP_750934.1|  ceramide synthase membrane component Lag1 ...    35   1.4  
emb|CAE60847.1|  Hypothetical protein CBG04556 [Caenorhabdit...    33   7.2  

>ref|XP_472685.1| OSJNBa0086B14.27 [Oryza sativa (japonica cultivar-group)]
 emb|CAE75876.1| OSJNBa0086B14.27 [Oryza sativa (japonica cultivar-group)]
          Length = 920

 Score =  179 bits (454), Expect = 6e-44
 Identities = 92/125 (73%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
 Frame = -2

Query: 612  EVQLVSPETNRKDVNLPGILQSPISNMLRKVEKVSQDIPKHRKVTHPEYEVETANGRITK 433
            ++QLVSPET RKDVNL GI+QSPI+NMLRKVEK +QDIPKHRKVTH EYEVETANGRITK
Sbjct: 795  QLQLVSPETKRKDVNLSGIIQSPITNMLRKVEKGTQDIPKHRKVTHHEYEVETANGRITK 854

Query: 432  RRKTRSPVMFG--EPNSQKPLHNXXXXXXXXXXXVPTRSRAHPANIGELFSEGSLNPYAD 259
            RRKT+S VMFG  EPN+QK LH+           V   S  HPANIGELFSEGSLNPYA+
Sbjct: 855  RRKTKSTVMFGVQEPNTQKSLHDTADKDPTKMKKVVAGSHPHPANIGELFSEGSLNPYAE 914

Query: 258  DPYAF 244
            DPYAF
Sbjct: 915  DPYAF 919



>emb|CAE04367.1| OSJNBa0027G07.1 [Oryza sativa (japonica cultivar-group)]
          Length = 894

 Score =  179 bits (454), Expect = 6e-44
 Identities = 92/125 (73%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
 Frame = -2

Query: 612  EVQLVSPETNRKDVNLPGILQSPISNMLRKVEKVSQDIPKHRKVTHPEYEVETANGRITK 433
            ++QLVSPET RKDVNL GI+QSPI+NMLRKVEK +QDIPKHRKVTH EYEVETANGRITK
Sbjct: 769  QLQLVSPETKRKDVNLSGIIQSPITNMLRKVEKGTQDIPKHRKVTHHEYEVETANGRITK 828

Query: 432  RRKTRSPVMFG--EPNSQKPLHNXXXXXXXXXXXVPTRSRAHPANIGELFSEGSLNPYAD 259
            RRKT+S VMFG  EPN+QK LH+           V   S  HPANIGELFSEGSLNPYA+
Sbjct: 829  RRKTKSTVMFGVQEPNTQKSLHDTADKDPTKMKKVVAGSHPHPANIGELFSEGSLNPYAE 888

Query: 258  DPYAF 244
            DPYAF
Sbjct: 889  DPYAF 893



>ref|NP_173645.3| unknown protein [Arabidopsis thaliana]
 gb|AAY46119.1| synaptonemal complex central region protein ZYP1a [Arabidopsis
            thaliana]
 gb|AAF87265.1| T16E15.12 [Arabidopsis thaliana]
 sp|Q9LME2|Y1226_ARATH Hypothetical protein At1g22260
          Length = 871

 Score =  105 bits (263), Expect = 9e-22
 Identities = 59/130 (45%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
 Frame = -2

Query: 609  VQLVSPETNRKDVNLPGILQSPISNMLRKVEKVSQ----DIPK---HRKVTHPEYEVETA 451
            +++ S   N +D       ++P+S +L+K + V+      IP    H KVTH EYEVET 
Sbjct: 742  IRVRSDNDNVQDSPFVKAKETPVSKILKKAQNVNAGSVLSIPNPKHHSKVTHREYEVETN 801

Query: 450  NGRITKRRKTRSPVMFGEPNSQKPLHNXXXXXXXXXXXVPTRSRAHPANIGELFSEGSLN 271
            NGR+TKRRKTR+  MF EP  ++                   S A  ANIG+LFSEGSLN
Sbjct: 802  NGRVTKRRKTRNTTMFEEPQRRRTRATPKLTPQSIAKGTGMTSHARSANIGDLFSEGSLN 861

Query: 270  PYADDPYAFD 241
            PYADDPYAFD
Sbjct: 862  PYADDPYAFD 871



>ref|NP_564164.1| unknown protein [Arabidopsis thaliana]
 gb|AAY46120.1| synaptonemal complex central region protein ZYP1b [Arabidopsis
            thaliana]
 sp|P61430|Y1275_ARATH Hypothetical protein At1g22275
          Length = 856

 Score = 94.4 bits (233), Expect = 3e-18
 Identities = 54/103 (52%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
 Frame = -2

Query: 543  ISNMLRKVEKVSQDIPKHR-KVTHPEYEVETANGRITKRRKTRSPVMFGEPNSQKP-LHN 370
            +SN+L++        PKH  KVTH EYEVET NGRI KRRKTR   MF EP  +   L  
Sbjct: 759  VSNILKEATN-----PKHHSKVTHREYEVETNNGRIPKRRKTRQTTMFQEPQRRSTRLTP 813

Query: 369  XXXXXXXXXXXVPTRSRAHPANIGELFSEGSLNPYADDPYAFD 241
                              H ANIG+LFSEGSLNPYADDPYAFD
Sbjct: 814  KLMTPTIIAKETAMADHPHSANIGDLFSEGSLNPYADDPYAFD 856



>gb|AAF87264.1| EST gb|F14399 comes from this gene. [Arabidopsis thaliana]
          Length = 1025

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 40/89 (44%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
 Frame = -2

Query: 543  ISNMLRKVEKVSQDIPKHR-KVTHPEYEVETANGRITKRRKTRSPVMFGEPNSQKP-LHN 370
            +SN+L++        PKH  KVTH EYEVET NGRI KRRKTR   MF EP  +   L  
Sbjct: 904  VSNILKEATN-----PKHHSKVTHREYEVETNNGRIPKRRKTRQTTMFQEPQRRSTRLTP 958

Query: 369  XXXXXXXXXXXVPTRSRAHPANIGELFSE 283
                              H ANIG+LFSE
Sbjct: 959  KLMTPTIIAKETAMADHPHSANIGDLFSE 987



>gb|AAF87847.1| F16L1.1 [Arabidopsis thaliana]
          Length = 35

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 24/28 (85%), Positives = 25/28 (89%)
 Frame = -2

Query: 324 SRAHPANIGELFSEGSLNPYADDPYAFD 241
           S A  ANIG+LFSEGSLNPYADDPYAFD
Sbjct: 8   SHARSANIGDLFSEGSLNPYADDPYAFD 35



>ref|XP_750934.1| ceramide synthase membrane component Lag1 [Aspergillus fumigatus
           Af293]
 gb|EAL88896.1| ceramide synthase membrane component (Lag1), putative [Aspergillus
           fumigatus Af293]
          Length = 440

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = -2

Query: 570 NLPGILQSPISNMLRKVEKVSQDIPKHRKVTHPEYEVETANGRITKRRKTRSPV 409
           ++PG   +P  + + +V  V +D PK  K    +   E A    T+RRK RSP+
Sbjct: 12  DIPGDTTAPAMSTMNEVSPVEEDAPKWDKALQNQVTPEKALKSQTRRRKNRSPL 65



>emb|CAE60847.1| Hypothetical protein CBG04556 [Caenorhabditis briggsae]
          Length = 285

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 21/50 (42%), Positives = 26/50 (52%)
 Frame = -3

Query: 500 FLNIER*PTLNTKLRQQMEESQSAGKLGALSCLVNRTLRNHCIILLTKML 351
           FL +ER PT+++      E SQ  G LGA S        NHC  L TK+L
Sbjct: 221 FLVLERNPTISSSSSVSSEISQVLGSLGAHSAANPIISMNHCNDLPTKIL 270



  Database: nr
    Posted date:  Apr 6, 2006  2:41 PM
  Number of letters in database: 1,185,965,366
  Number of sequences in database:  3,454,138
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,371,526,146
Number of Sequences: 3454138
Number of extensions: 29406687
Number of successful extensions: 74829
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 72667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74814
length of database: 1,185,965,366
effective HSP length: 124
effective length of database: 757,652,254
effective search space used: 59854528066
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)