BLASTX 2.2.6 [Apr-09-2003]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2619346.2.2
(1471 letters)
Database: nr
3,454,138 sequences; 1,185,965,366 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_665898.1| SNF2 domain/helicase domain/RING finger do... 40 0.25
gb|EAS04887.1| ubiquitin-transferase, HECT domain [Tetrahym... 39 0.56
gb|AAT77298.1| unknown protein [Oryza sativa (japonica cult... 39 0.56
ref|XP_629810.1| hypothetical protein DDB0184204 [Dictyoste... 38 1.2
ref|XP_638712.1| hypothetical protein DDB0185803 [Dictyoste... 38 1.2
ref|XP_629025.1| hypothetical protein DDB0192024 [Dictyoste... 38 1.2
ref|XP_628233.1| hypothetical protein cgd7_420 [Cryptospori... 37 1.6
ref|XP_625598.1| hypothetical protein cgd5_4360 [Cryptospor... 37 2.1
ref|XP_641576.1| hypothetical protein DDB0205961 [Dictyoste... 37 2.1
ref|ZP_00439137.1| COG3321: Polyketide synthase modules and... 37 2.1
emb|CAE71506.1| Hypothetical protein CBG18438 [Caenorhabdit... 37 2.8
ref|XP_639257.1| hypothetical protein DDB0218446 [Dictyoste... 37 2.8
emb|CAE57839.1| Hypothetical protein CBG00866 [Caenorhabdit... 36 4.7
emb|CAE61325.1| Hypothetical protein CBG05162 [Caenorhabdit... 36 4.7
emb|CAE58332.1| Hypothetical protein CBG01445 [Caenorhabdit... 35 6.2
gb|AAO52306.1| similar to Plasmodium falciparum. Hypothetic... 35 6.2
ref|XP_643814.1| hypothetical protein DDB0217622 [Dictyoste... 35 6.2
gb|AAO51556.1| similar to Plasmodium falciparum. Protein ki... 35 6.2
ref|XP_642522.1| hypothetical protein DDB0218010 [Dictyoste... 35 6.2
gb|AAB01372.1| A-alphaZ4 protein [Schizophyllum commune] >g... 35 6.2
gb|EAL27269.1| GA20686-PA [Drosophila pseudoobscura] 35 8.1
ref|XP_580515.2| PREDICTED: similar to Tribbles homolog 3 (... 35 8.1
ref|XP_640187.1| hypothetical protein DDB0218401 [Dictyoste... 35 8.1
>ref|XP_665898.1| SNF2 domain/helicase domain/RING finger domain-containing protein
[Cryptosporidium hominis TU502]
gb|EAL35669.1| SNF2 domain/helicase domain/RING finger domain-containing protein
[Cryptosporidium hominis]
Length = 1792
Score = 40.0 bits (92), Expect = 0.25
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 302 SQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
+QN N+NL Q+Q+LNLNQS L++NQ +L+ N NQ+
Sbjct: 1385 NQNQNQNLDVNQNQNLNLNQSQNLDVNQNQNLDVNQNQN 1423
Score = 37.7 bits (86), Expect = 1.2
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Frame = +2
Query: 296 CPSQNLNRNL--CHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
C SQ++++NL Q+Q+L++NQ+ LNLNQ +L+ N NQ+
Sbjct: 1373 CSSQSMSQNLDMNQNQNQNLDVNQNQNLNLNQSQNLDVNQNQN 1415
Score = 36.2 bits (82), Expect = 3.6
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +2
Query: 242 CPSRSHNLKLSRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
C S+S + L + + N N+NL QSQ+L++NQ+ L++NQ +L+ N NQ+
Sbjct: 1373 CSSQSMSQNLDMNQNQNQNLDVNQNQNLNLNQSQNLDVNQNQNLDVNQNQNLDVNQNQN 1431
>gb|EAS04887.1| ubiquitin-transferase, HECT domain [Tetrahymena thermophila SB210]
Length = 525
Score = 38.9 bits (89), Expect = 0.56
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 272 SRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSL-NQNPNQ 415
+R+PI H P+QN NRNL H S + + Q N PSL N NPNQ
Sbjct: 43 NRNPIQQHAPNQNNNRNLNHSVSNNNDSIQQEGQNQFPNPSLINNNPNQ 91
>gb|AAT77298.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 254
Score = 38.9 bits (89), Expect = 0.56
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 12/77 (15%)
Frame = +2
Query: 233 PLRCPSRSHNLKLSRSPICSHCPSQNLNRNLCHIQSQ------------SLNLNQSPTLN 376
P +S +L LS+S S+ +QN + +L H Q+Q SLNLN+S
Sbjct: 86 PRHNQKQSQSLSLSQSQSPSYTQNQNQSPSLSHSQNQIPRLRRSQSLNPSLNLNRSLPHR 145
Query: 377 LNQCPSLNQNPNQSHCL 427
LNQ + NQN QS L
Sbjct: 146 LNQRQNRNQNQRQSQSL 162
Score = 35.8 bits (81), Expect = 4.7
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +2
Query: 248 SRSHNLKLSRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLNL--NQCPSLNQNPNQSH 421
SRS + +L+RS S Q+LN+N QS N QS +L+L +Q PS QN NQS
Sbjct: 57 SRSRSRQLTRS--LSPNQRQSLNQNQSQRQSPRHNQKQSQSLSLSQSQSPSYTQNQNQSP 114
Query: 422 CL 427
L
Sbjct: 115 SL 116
>ref|XP_629810.1| hypothetical protein DDB0184204 [Dictyostelium discoideum]
gb|EAL61391.1| hypothetical protein DDB0184204 [Dictyostelium discoideum]
Length = 827
Score = 37.7 bits (86), Expect = 1.2
Identities = 19/51 (37%), Positives = 31/51 (60%)
Frame = +2
Query: 266 KLSRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
++ +PI ++ +QN N+N Q+Q+ N NQ+ N NQ + NQN NQ+
Sbjct: 667 RVVNNPIVNNNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQN 717
>ref|XP_638712.1| hypothetical protein DDB0185803 [Dictyostelium discoideum AX4]
gb|EAL65365.1| hypothetical protein DDB0185803 [Dictyostelium discoideum]
Length = 1186
Score = 37.7 bits (86), Expect = 1.2
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 302 SQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQSH 421
+QN N+N I +Q+LN NQ+ N NQ + NQN NQ+H
Sbjct: 1044 NQNPNQNQNQILNQNLNQNQNQNHNQNQNQNHNQNHNQNH 1083
>ref|XP_629025.1| hypothetical protein DDB0192024 [Dictyostelium discoideum]
gb|EAL60605.1| hypothetical protein DDB0192024 [Dictyostelium discoideum]
Length = 2014
Score = 37.7 bits (86), Expect = 1.2
Identities = 22/69 (31%), Positives = 37/69 (53%)
Frame = +2
Query: 212 RASMDVLPLRCPSRSHNLKLSRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCP 391
+ S D ++ P+ N +++ + P+QN N+N Q+ + N N +P N NQ P
Sbjct: 1001 KGSQDFTNIQPPTPPVNNHQNQNQNQNQNPNQNQNQNQNQNQNPNPNPNPNPNPNPNQNP 1060
Query: 392 SLNQNPNQS 418
+ NQN NQ+
Sbjct: 1061 NPNQNQNQN 1069
>ref|XP_628233.1| hypothetical protein cgd7_420 [Cryptosporidium parvum Iowa II]
gb|EAK90533.1| protein with DEXDc plus ring plus HELICc; possible SNF2 domain
[Cryptosporidium parvum]
Length = 2042
Score = 37.4 bits (85), Expect = 1.6
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +2
Query: 254 SHNLKLSRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
+ NL ++++ +QN N+NL QSQ+L++NQ+ +N NQ L+QN NQ+
Sbjct: 1382 NQNLDVNQNRNLDVNQNQNQNQNLDVNQSQNLDVNQNLDVNQNQNLDLSQNQNQN 1436
>ref|XP_625598.1| hypothetical protein cgd5_4360 [Cryptosporidium parvum Iowa II]
gb|EAK87583.1| large protein with possible RING domain [Cryptosporidium parvum]
Length = 1364
Score = 37.0 bits (84), Expect = 2.1
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Frame = +2
Query: 224 DVLPLRCPSRSHN--LKLSRSPICSHC--PSQNLNRNLCHIQSQSLNLNQSPTLNLNQCP 391
D L L PS+ + ++LSR P+C +C + LN + C + + LNL +P+ LNQ
Sbjct: 409 DTLNLDTPSKPKDGCIELSRHPLCHYCRRSCKRLNYSRCPSKLKPLNLGINPS-GLNQTT 467
Query: 392 SLNQNPNQSHCLH 430
QNPN + L+
Sbjct: 468 QA-QNPNSNSILN 479
>ref|XP_641576.1| hypothetical protein DDB0205961 [Dictyostelium discoideum]
gb|EAL67601.1| hypothetical protein DDB0205961 [Dictyostelium discoideum]
Length = 759
Score = 37.0 bits (84), Expect = 2.1
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +2
Query: 293 HCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQSHCLH 430
H +QN N+N Q+Q+ N NQ+ N NQ + NQN +Q+ LH
Sbjct: 160 HQQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQNQSQNQHLH 205
>ref|ZP_00439137.1| COG3321: Polyketide synthase modules and related proteins
[Burkholderia mallei GB8 horse 4]
Length = 1516
Score = 37.0 bits (84), Expect = 2.1
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +3
Query: 12 SNSSRARERKTH---RRVSRLITCRSSRNGGDASPLLLSPRRASGRSGRCHRLRRSGCCR 182
+ S+RAR R RRV+ + R++R G A R +GRC R RR G R
Sbjct: 1109 ARSARARRRTARARRRRVAPVARRRAARRGRAAGA------RVDRGAGRCRRARRGGHRR 1162
Query: 183 LR-AWPRR 203
R AWPRR
Sbjct: 1163 ARAAWPRR 1170
>emb|CAE71506.1| Hypothetical protein CBG18438 [Caenorhabditis briggsae]
Length = 535
Score = 36.6 bits (83), Expect = 2.8
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Frame = +2
Query: 248 SRSHNLKLSRSPICSHCPSQNL----NRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQ 415
S S NL++S SP SQNL ++NL +SQ+L +++S L +++ P+L + +Q
Sbjct: 16 SESQNLRISESPNLRISESQNLRISESQNLRISESQNLRISESQNLRISESPNLRISESQ 75
Query: 416 S 418
+
Sbjct: 76 N 76
>ref|XP_639257.1| hypothetical protein DDB0218446 [Dictyostelium discoideum]
gb|EAL65903.1| hypothetical protein DDB0218446 [Dictyostelium discoideum]
Length = 1256
Score = 36.6 bits (83), Expect = 2.8
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 302 SQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQ 415
+QN N+N Q+Q+ N NQ+ NLNQ + NQN NQ
Sbjct: 239 NQNQNQNQNQNQNQNQNQNQNQNQNLNQVQNQNQNQNQ 276
Score = 35.0 bits (79), Expect = 8.1
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = +2
Query: 302 SQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
SQN N N + Q+Q+ N NQ+ N NQ + NQN NQ+
Sbjct: 207 SQNQNNNQNNNQNQNQNQNQNQNQNQNQNQNQNQNQNQN 245
>emb|CAE57839.1| Hypothetical protein CBG00866 [Caenorhabditis briggsae]
Length = 734
Score = 35.8 bits (81), Expect = 4.7
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Frame = +2
Query: 248 SRSHNLKLSRSPICSHCPSQNL----NRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQ 415
S SHNL++S S + SQNL + NL +SQ+L +++S L +++ +L + +Q
Sbjct: 207 SESHNLRISESQLLRFSDSQNLRISESPNLSISESQNLRISESQNLRISESQNLRISESQ 266
Query: 416 S 418
+
Sbjct: 267 N 267
>emb|CAE61325.1| Hypothetical protein CBG05162 [Caenorhabditis briggsae]
Length = 164
Score = 35.8 bits (81), Expect = 4.7
Identities = 20/61 (32%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Frame = +2
Query: 248 SRSHNLKLSRSPICSHCPSQNL----NRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQ 415
S SHNL++S S + SQNL ++NL +SQ+L +++S L +++ +L + +Q
Sbjct: 60 SESHNLRISESQNLRNLESQNLIILESQNLIISESQNLRISESQNLRISESQNLRISESQ 119
Query: 416 S 418
+
Sbjct: 120 N 120
>emb|CAE58332.1| Hypothetical protein CBG01445 [Caenorhabditis briggsae]
Length = 233
Score = 35.4 bits (80), Expect = 6.2
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +2
Query: 248 SRSHNLKLSRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQS 418
S S NL++S S SQNLN + QS++L +++S L +++ +L + +Q+
Sbjct: 25 SESQNLRISESQNLKVSISQNLNHRIPESQSENLRISESQNLRISESQNLRISESQN 81
>gb|AAO52306.1| similar to Plasmodium falciparum. Hypothetical protein
[Dictyostelium discoideum]
Length = 964
Score = 35.4 bits (80), Expect = 6.2
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 299 PSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQSH 421
PS N N+N Q+Q+ N NQ+ N NQ + NQN NQ+H
Sbjct: 209 PSTNQNQN--QNQNQNQNQNQNQNQNQNQNQNQNQNQNQNH 247
>ref|XP_643814.1| hypothetical protein DDB0217622 [Dictyostelium discoideum]
gb|EAL69922.1| hypothetical protein DDB0217622 [Dictyostelium discoideum]
Length = 833
Score = 35.4 bits (80), Expect = 6.2
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +2
Query: 299 PSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQSH 421
PS N N+N Q+Q+ N NQ+ N NQ + NQN NQ+H
Sbjct: 209 PSTNQNQN--QNQNQNQNQNQNQNQNQNQNQNQNQNQNQNH 247
>gb|AAO51556.1| similar to Plasmodium falciparum. Protein kinase, putative
[Dictyostelium discoideum]
Length = 1918
Score = 35.4 bits (80), Expect = 6.2
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +2
Query: 299 PSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQ 415
PSQN RN Q+ + N NQ+P N NQ P NQNPNQ
Sbjct: 1225 PSQNYQRN--SNQNSNQNPNQNPNQNPNQNP--NQNPNQ 1259
>ref|XP_642522.1| hypothetical protein DDB0218010 [Dictyostelium discoideum]
gb|EAL68601.1| hypothetical protein DDB0218010 [Dictyostelium discoideum]
Length = 1918
Score = 35.4 bits (80), Expect = 6.2
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +2
Query: 299 PSQNLNRNLCHIQSQSLNLNQSPTLNLNQCPSLNQNPNQ 415
PSQN RN Q+ + N NQ+P N NQ P NQNPNQ
Sbjct: 1225 PSQNYQRN--SNQNSNQNPNQNPNQNPNQNP--NQNPNQ 1259
>gb|AAB01372.1| A-alphaZ4 protein [Schizophyllum commune]
sp|P37938|MAAZ4_SCHCO Mating-type protein A-alpha Z4
Length = 940
Score = 35.4 bits (80), Expect = 6.2
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +2
Query: 35 EEDTPQS*QANNLQEQQEWRRRVASLAFS---SPCFWQEWPLPPPSTKRLLPASGLATAR 205
+E T QS A++ ++ ++R+ L+ P W ++ L PP+ RL P+ GL +
Sbjct: 705 DETTTQSTSASSSRDTTSQQKRMPPLSIDPRFDPALWSKYDLSPPADGRLHPSDGLRPSA 764
Query: 206 VSRASMDV 229
+DV
Sbjct: 765 FVPTKLDV 772
>gb|EAL27269.1| GA20686-PA [Drosophila pseudoobscura]
Length = 1153
Score = 35.0 bits (79), Expect = 8.1
Identities = 25/69 (36%), Positives = 38/69 (55%)
Frame = +2
Query: 212 RASMDVLPLRCPSRSHNLKLSRSPICSHCPSQNLNRNLCHIQSQSLNLNQSPTLNLNQCP 391
R + LP P+R H K S +H +QN N+N Q+++ + +QS +LNL+
Sbjct: 817 RPTNPALPPPPPARKHPPKADNSTSQNHNQNQNQNQN----QNKNQSPSQSQSLNLSL-- 870
Query: 392 SLNQNPNQS 418
SLN + NQS
Sbjct: 871 SLNHSQNQS 879
>ref|XP_580515.2| PREDICTED: similar to Tribbles homolog 3 (TRB-3) (Neuronal cell
death inducible putative kinase) isoform 1 [Bos taurus]
Length = 404
Score = 35.0 bits (79), Expect = 8.1
Identities = 27/82 (32%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 179 PASGLATARVSRASMDVLPLRCPSRSHNLKLSRSPICSHCPSQNLNRNLCHIQSQSLNLN 358
P GL T R RAS +P PSR L+L + + CPSQ R+
Sbjct: 38 PCGGLGTGRQMRASPLAVPANAPSRKKRLELD-DDLDTECPSQKQARS------------ 84
Query: 359 QSPTLNLNQCP-SLNQNPNQSH 421
P L CP +LN P H
Sbjct: 85 -GPQPRLPSCPLTLNPPPAPVH 105
>ref|XP_640187.1| hypothetical protein DDB0218401 [Dictyostelium discoideum]
gb|EAL66260.1| hypothetical protein DDB0218401 [Dictyostelium discoideum]
Length = 3080
Score = 35.0 bits (79), Expect = 8.1
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Frame = +2
Query: 29 KREEDTPQS*QANNLQEQQEWRRRVASLAFSSPCFWQEWPLPP-PSTKRLLPASGLATAR 205
K+++ + QS Q Q+QQ+ + + SP +Q+ PLPP P + + LP+S ++T
Sbjct: 469 KKDQQSQQS-QPQPQQQQQQQQSSQNNQIQQSPLQYQQ-PLPPTPISNKSLPSSPMSTKS 526
Query: 206 VS-----------------RASMDVLPLRCPSRSHNLKLSRSPICSHCPSQNLNRNLCHI 334
+ R + +PL +S S S S N+ L +I
Sbjct: 527 TTVHIQNNNNGGGGGIIRPRKPLPPVPLGMIGKSSMAMTSNSSFGS-------NKPLNYI 579
Query: 335 QSQSLNLNQSPTLNLNQCPSLNQ 403
Q Q L L Q + S+NQ
Sbjct: 580 QQQQLQLQQQKVIGYQTSASINQ 602
Database: nr
Posted date: Apr 6, 2006 2:41 PM
Number of letters in database: 1,185,965,366
Number of sequences in database: 3,454,138
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,147,747,700
Number of Sequences: 3454138
Number of extensions: 18286714
Number of successful extensions: 70084
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 64560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69194
length of database: 1,185,965,366
effective HSP length: 134
effective length of database: 723,110,874
effective search space used: 256704360270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)